{
    "bcoid": "GLY_000188",
    "title": "Glycan Xref GlycO (Rat GlyTouCan Masterlist)",
    "description": "The dataset provides cross-references to GlycO ID(s) for the associated glycan (GlyTouCan Accession). ...",
    "filename": "rat_glycan_xref_glyco.csv",
    "filetype": "csv",
    "categories": {
        "species": "Rattus norvegicus",
        "molecule": "Glycan",
        "tags": "GLYCO Cross-references",
        "status": "Reviewed",
        "file_type": "csv",
        "scope": "internal"
    },
    "minitable": {
        "content": [
            [
                "G00031MO...",
                "GOG922..."
            ],
            [
                "G00049MO...",
                "GOG983..."
            ]
        ],
        "headers": [
            "glytoucan_ac...",
            "database_id..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "glytoucan_ac"
                },
                {
                    "type": "string",
                    "label": "database_id"
                },
                {
                    "type": "string",
                    "label": "database_label"
                }
            ],
            [
                "G00031MO",
                "GOG922",
                "Glyco"
            ],
            [
                "G00049MO",
                "GOG983",
                "Glyco"
            ],
            [
                "G00050MO",
                "GOG1063",
                "Glyco"
            ],
            [
                "G00176HZ",
                "GOG58",
                "Glyco"
            ],
            [
                "G02149VR",
                "GOG962",
                "Glyco"
            ],
            [
                "G04715SK",
                "GOG1054",
                "Glyco"
            ],
            [
                "G07483YN",
                "GOG174",
                "Glyco"
            ],
            [
                "G08520NM",
                "GOG136",
                "Glyco"
            ],
            [
                "G09724ZC",
                "GOG161",
                "Glyco"
            ],
            [
                "G09921WG",
                "GOG463",
                "Glyco"
            ],
            [
                "G11041DA",
                "GOG8",
                "Glyco"
            ],
            [
                "G11535IB",
                "GOG225",
                "Glyco"
            ],
            [
                "G11637WL",
                "GOG31",
                "Glyco"
            ],
            [
                "G16828VN",
                "GOG40",
                "Glyco"
            ],
            [
                "G17689DH",
                "GOG142",
                "Glyco"
            ],
            [
                "G18938DW",
                "GOG3",
                "Glyco"
            ],
            [
                "G20815TK",
                "GOG34",
                "Glyco"
            ],
            [
                "G20966TZ",
                "GOG23",
                "Glyco"
            ],
            [
                "G22768VO",
                "GOG22",
                "Glyco"
            ],
            [
                "G23295TF",
                "GOG82",
                "Glyco"
            ],
            [
                "G25520XG",
                "GOG177",
                "Glyco"
            ],
            [
                "G27919IH",
                "GOG44",
                "Glyco"
            ],
            [
                "G28948UC",
                "GOG290",
                "Glyco"
            ],
            [
                "G29011JC",
                "GOG38",
                "Glyco"
            ],
            [
                "G29857RC",
                "GOG2",
                "Glyco"
            ],
            [
                "G30159WR",
                "GOG49",
                "Glyco"
            ],
            [
                "G30901GC",
                "GOG231",
                "Glyco"
            ],
            [
                "G32156ZV",
                "GOG65",
                "Glyco"
            ],
            [
                "G32801HX",
                "GOG1046",
                "Glyco"
            ],
            [
                "G36191CD",
                "GOG1",
                "Glyco"
            ],
            [
                "G37135JQ",
                "GOG149",
                "Glyco"
            ],
            [
                "G39213VZ",
                "GOG131",
                "Glyco"
            ],
            [
                "G45359RY",
                "GOG168",
                "Glyco"
            ],
            [
                "G51367TM",
                "GOG374",
                "Glyco"
            ],
            [
                "G51793MY",
                "GOG347",
                "Glyco"
            ],
            [
                "G52934AK",
                "GOG283",
                "Glyco"
            ],
            [
                "G53752TA",
                "GOG196",
                "Glyco"
            ],
            [
                "G54733XO",
                "GOG1032",
                "Glyco"
            ],
            [
                "G55220VL",
                "GOG15",
                "Glyco"
            ],
            [
                "G56749GV",
                "GOG9",
                "Glyco"
            ],
            [
                "G58667NI",
                "GOG47",
                "Glyco"
            ],
            [
                "G59471TH",
                "GOG151",
                "Glyco"
            ],
            [
                "G60230HH",
                "GOG21",
                "Glyco"
            ],
            [
                "G61386ZX",
                "GOG1041",
                "Glyco"
            ],
            [
                "G62389NM",
                "GOG577",
                "Glyco"
            ],
            [
                "G63238VS",
                "GOG1121",
                "Glyco"
            ],
            [
                "G63889NK",
                "GOG279",
                "Glyco"
            ],
            [
                "G64633BH",
                "GOG450",
                "Glyco"
            ],
            [
                "G65562ZE",
                "GOG904",
                "Glyco"
            ],
            [
                "G65890UA",
                "GOG172",
                "Glyco"
            ],
            [
                "G67942CH",
                "GOG50",
                "Glyco"
            ],
            [
                "G71013KY",
                "GOG48",
                "Glyco"
            ],
            [
                "G77252PU",
                "GOG162",
                "Glyco"
            ],
            [
                "G78059CC",
                "GOG153",
                "Glyco"
            ],
            [
                "G79809MM",
                "GOG171",
                "Glyco"
            ],
            [
                "G80858MF",
                "GOG175",
                "Glyco"
            ],
            [
                "G80966KZ",
                "GOG16",
                "Glyco"
            ],
            [
                "G81983KG",
                "GOG979",
                "Glyco"
            ],
            [
                "G82348BZ",
                "GOG37",
                "Glyco"
            ],
            [
                "G82420SH",
                "GOG462",
                "Glyco"
            ],
            [
                "G82858KU",
                "GOG1065",
                "Glyco"
            ],
            [
                "G82942ZJ",
                "GOG32",
                "Glyco"
            ],
            [
                "G84467IZ",
                "GOG35",
                "Glyco"
            ],
            [
                "G85767HW",
                "GOG45",
                "Glyco"
            ],
            [
                "G86357DX",
                "GOG30",
                "Glyco"
            ],
            [
                "G91532KA",
                "GOG985",
                "Glyco"
            ],
            [
                "G96921ZU",
                "GOG10",
                "Glyco"
            ],
            [
                "G99858XP",
                "GOG33",
                "Glyco"
            ]
        ]
    },
    "readme": "Name\n   - Glycan Xref GlycO (Rat GlyTouCan Masterlist)\n\nVersion\n   - 1.4.5\n\nCreated on\n  - 2019-08-13T19:58:41.979439\n\nModified on\n   - 2019-09-12T11:40:19.223139\n\nCreated by\n   - Rahi Navelkar [rsn13@gwu.edu], Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Xavier Holmes [xavierh@email.gwu.edu]\n\nAuthors\n   - Nathan Edwards [nje5@georgetown.edu]\n\nChecksum\n   - \n\nUsability Domain\n   - The dataset provides cross-references to GlycO ID(s) for the associated glycan (GlyTouCan Accession). The listed GlyTouCan Accessions are derived from the Rat GlyTouCan accession master list (https://data.glygen.org/GLYDS000146). Source database: https://glytoucan.org/\n\nDescription Domain\n   Keywords\n   - Glycan\n   - GlyTouCan Accession\n   - Glyco\n   - Cross-references\n   - ID/Accession Mapping\n\n   Pipeline Steps\n   - Step-1: The input file was downloaded from the author and a python script is used to extract the data for the GlyTouCan accessions based on the acession master list. Refer to the usability domain for more information on master list.\n\nExecution Domain\n   Scripts   - https://github.com/GW-HIVE/glygen-backend-integration/blob/master/pipeline/integrator/make-glycan-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: gdb.tsv\n      URI: https://data.glygen.org/ln2wwwdata/source/gdb.tsv\n   Output Subdomain\n      Name: rat_glycan_xref_glyco.csv\n      URI: http://data.glygen.org/ln2wwwdata/reviewed/rat_glycan_xref_glyco.csv\n      Name: rat_glycan_xref_glyco.stat.csv\n      URI: http://data.glygen.org/ln2wwwdata/reviewed/rat_glycan_xref_glyco.stat.csv\n\nFields\n      Name: \"database_id\"\n     Description: \"Identifier in the database\"\n      Unique Values: \"68\"\n      Name: \"glytoucan_ac\"\n     Description: \"\"\n      Unique Values: \"68\"\n      Name: \"database_label\"\n     Description: \"Label or name assigned to the corresponding identifier in the source database\"\n      Unique Values: \"1\"",
    "downloadurl": "/ln2data/releases/data/v-1.4.5/reviewed/rat_glycan_xref_glyco.csv"
}