{
    "bcoid": "GLY_000185",
    "title": "Glycan Xref CFG (Rat GlyTouCan Masterlist)",
    "description": "The dataset provides cross-references to CFG ID's for the associated glycan (GlyTouCan Accession). The ...",
    "filename": "rat_glycan_xref_cfg.csv",
    "filetype": "csv",
    "categories": {
        "species": "Rattus norvegicus",
        "molecule": "Glycan",
        "tags": "CFG cross-references",
        "status": "Reviewed",
        "file_type": "csv",
        "scope": "internal"
    },
    "minitable": {
        "content": [
            [
                "G00031MO...",
                "carbOlink_20..."
            ],
            [
                "G00031MO...",
                "carbOlink_20..."
            ]
        ],
        "headers": [
            "glytoucan_ac...",
            "database_id..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "glytoucan_ac"
                },
                {
                    "type": "string",
                    "label": "database_id"
                },
                {
                    "type": "string",
                    "label": "database_label"
                }
            ],
            [
                "G00031MO",
                "carbOlink_20077_D000",
                "CFG"
            ],
            [
                "G00031MO",
                "carbOlink_20078_D000",
                "CFG"
            ],
            [
                "G00031MO",
                "carbOlink_20079_D000",
                "CFG"
            ],
            [
                "G00031MO",
                "carbSynthe_0068_D000",
                "CFG"
            ],
            [
                "G00031MO",
                "carbSynthe_0434_D000",
                "CFG"
            ],
            [
                "G00031MO",
                "carbSynthe_0627_D000",
                "CFG"
            ],
            [
                "G00049MO",
                "carbGlipid_21021_D000",
                "CFG"
            ],
            [
                "G00049MO",
                "carbSynthe_0148_D000",
                "CFG"
            ],
            [
                "G00049MO",
                "carbSynthe_0633_D000",
                "CFG"
            ],
            [
                "G00049MO",
                "carbSynthe_0929_D000",
                "CFG"
            ],
            [
                "G00050MO",
                "carbSynthe_0027_D000",
                "CFG"
            ],
            [
                "G00050MO",
                "carbSynthe_0829_D000",
                "CFG"
            ],
            [
                "G00050MO",
                "carbSynthe_0830_D000",
                "CFG"
            ],
            [
                "G00051MO",
                "carbSynthe_0024_D000",
                "CFG"
            ],
            [
                "G00051MO",
                "carbSynthe_0636_D000",
                "CFG"
            ],
            [
                "G00051MO",
                "carbSynthe_0637_D000",
                "CFG"
            ],
            [
                "G00051MO",
                "carbSynthe_486_D000",
                "CFG"
            ],
            [
                "G00052MO",
                "carbSynthe_0087_D000",
                "CFG"
            ],
            [
                "G00052MO",
                "carbSynthe_0523_D000",
                "CFG"
            ],
            [
                "G00052MO",
                "carbSynthe_0524_D000",
                "CFG"
            ],
            [
                "G00052MO",
                "carbSynthe_0671_D000",
                "CFG"
            ],
            [
                "G00052MO",
                "carbSynthe_0672_D000",
                "CFG"
            ],
            [
                "G00055MO",
                "carbPDB_00001_D000",
                "CFG"
            ],
            [
                "G00055MO",
                "carbSynthe_0020_D000",
                "CFG"
            ],
            [
                "G00055MO",
                "carbSynthe_0095_D000",
                "CFG"
            ],
            [
                "G00055MO",
                "carbSynthe_0168_D000",
                "CFG"
            ],
            [
                "G00055MO",
                "carbSynthe_0641_D000",
                "CFG"
            ],
            [
                "G00055MO",
                "carbSynthe_0642_D000",
                "CFG"
            ],
            [
                "G00056MO",
                "carbSynthe_0018_D000",
                "CFG"
            ],
            [
                "G00056MO",
                "carbSynthe_0165_D000",
                "CFG"
            ],
            [
                "G00056MO",
                "carbSynthe_0166_D000",
                "CFG"
            ],
            [
                "G00056MO",
                "carbSynthe_0631_D000",
                "CFG"
            ],
            [
                "G00056MO",
                "carbSynthe_0632_D000",
                "CFG"
            ],
            [
                "G00058MO",
                "carbSynthe_0033_D000",
                "CFG"
            ],
            [
                "G00058MO",
                "carbSynthe_0194_D000",
                "CFG"
            ],
            [
                "G00058MO",
                "carbSynthe_0257_D000",
                "CFG"
            ],
            [
                "G00058MO",
                "carbSynthe_0258_D000",
                "CFG"
            ],
            [
                "G00058MO",
                "carbSynthe_0647_D000",
                "CFG"
            ],
            [
                "G00059MO",
                "carbGlipid_20042_D000",
                "CFG"
            ],
            [
                "G00059MO",
                "carbSynthe_0029_D000",
                "CFG"
            ],
            [
                "G00059MO",
                "carbSynthe_0174_D000",
                "CFG"
            ],
            [
                "G00059MO",
                "carbSynthe_0613_D000",
                "CFG"
            ],
            [
                "G00065MO",
                "carbSynthe_0037_D000",
                "CFG"
            ],
            [
                "G00065MO",
                "carbSynthe_0156_D000",
                "CFG"
            ],
            [
                "G00065MO",
                "carbSynthe_0185_D000",
                "CFG"
            ],
            [
                "G00065MO",
                "carbSynthe_0244_D000",
                "CFG"
            ],
            [
                "G00065MO",
                "carbSynthe_0739_D000",
                "CFG"
            ],
            [
                "G00065MO",
                "carbSynthe_0740_D000",
                "CFG"
            ],
            [
                "G00066MO",
                "carbSynthe_0080_D000",
                "CFG"
            ],
            [
                "G00066MO",
                "carbSynthe_0081_D000",
                "CFG"
            ],
            [
                "G00066MO",
                "carbSynthe_0651_D000",
                "CFG"
            ],
            [
                "G00068MO",
                "carbSynthe_0073_D000",
                "CFG"
            ],
            [
                "G00068MO",
                "carbSynthe_0663_D000",
                "CFG"
            ],
            [
                "G00520NI",
                "carbOlink_21131_D000",
                "CFG"
            ],
            [
                "G01223AA",
                "carbNlink_21484_P",
                "CFG"
            ],
            [
                "G01453BU",
                "carbOlink_21167_D000",
                "CFG"
            ],
            [
                "G02244ID",
                "carbOlink_20890_D000",
                "CFG"
            ],
            [
                "G02657AK",
                "carbGlipid_20258_D000",
                "CFG"
            ],
            [
                "G02657AK",
                "carbSynthe_0109_D000",
                "CFG"
            ],
            [
                "G02657AK",
                "carbSynthe_0753_D000",
                "CFG"
            ],
            [
                "G03764XL",
                "carbNlink_20438_D000",
                "CFG"
            ],
            [
                "G04618ND",
                "carbGlipid_21044_D000",
                "CFG"
            ],
            [
                "G04715SK",
                "carbGlipid_21043_D000",
                "CFG"
            ],
            [
                "G05724WC",
                "carbOlink_20376_D000",
                "CFG"
            ],
            [
                "G06661NE",
                "carbOlink_20537_D000",
                "CFG"
            ],
            [
                "G07430HH",
                "carbOlink_21138_D000",
                "CFG"
            ],
            [
                "G08371CD",
                "carbOlink_20663_D000",
                "CFG"
            ],
            [
                "G08371CD",
                "carbOlink_21109_D000",
                "CFG"
            ],
            [
                "G11041DA",
                "carbSynthe_0575_D000",
                "CFG"
            ],
            [
                "G14576KZ",
                "carbNlink_20393_D000",
                "CFG"
            ],
            [
                "G14576KZ",
                "carbNlink_21242_D000",
                "CFG"
            ],
            [
                "G14576KZ",
                "carbNlink_40309_D000",
                "CFG"
            ],
            [
                "G14576KZ",
                "carbNlink_41201_D000",
                "CFG"
            ],
            [
                "G15948XY",
                "carbGlipid_20190_D000",
                "CFG"
            ],
            [
                "G16612QG",
                "carbOlink_20036_D000",
                "CFG"
            ],
            [
                "G17790QU",
                "carbGlipid_20234_D000",
                "CFG"
            ],
            [
                "G17843DM",
                "carbOlink_20045_D000",
                "CFG"
            ],
            [
                "G18892PE",
                "carbOlink_20858_D000",
                "CFG"
            ],
            [
                "G19524AS",
                "carbGlipid_20212_D000",
                "CFG"
            ],
            [
                "G19524AS",
                "carbSynthe_0517_D000",
                "CFG"
            ],
            [
                "G19524AS",
                "carbSynthe_0518_D000",
                "CFG"
            ],
            [
                "G19524AS",
                "carbSynthe_0928_D000",
                "CFG"
            ],
            [
                "G20079RG",
                "carbNlink_21243_D000",
                "CFG"
            ],
            [
                "G20079RG",
                "carbNlink_40336_D000",
                "CFG"
            ]
        ]
    },
    "readme": "Name\n   - Glycan Xref CFG (Rat GlyTouCan Masterlist)\n\nVersion\n   - 1.4.5\n\nCreated on\n  - 2019-08-13T19:58:41.975196\n\nModified on\n   - \n\nCreated by\n   - Rahi Navelkar [rsn13@gwu.edu], Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Xavier Holmes [xavierh@email.gwu.edu]\n\nAuthors\n   - Nathan Edwards [nje5@georgetown.edu]\n\nChecksum\n   - \n\nUsability Domain\n   - The dataset provides cross-references to CFG ID's for the associated glycan (GlyTouCan Accession). The listed GlyTouCan Accessions are derived from the Rat GlyTouCan accession master list (https://data.glygen.org/GLYDS000146). Source database: https://glytoucan.org/; http://www.functionalglycomics.org/\n\nDescription Domain\n   Keywords\n   - Glycan\n   - GlyTouCan Accession\n   - CFG\n   - Cross-references\n   - ID/Accession Mapping\n\n   Pipeline Steps\n   - Step-1: The input file was downloaded from the author and a python script is used to extract the data for the GlyTouCan accessions based on the acession master list. Refer to the usability domain for more information on master list.\n\nExecution Domain\n   Scripts   - https://github.com/GW-HIVE/glygen-backend-integration/blob/master/pipeline/integrator/make-glycan-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: cfg.tsv\n      URI: https://data.glygen.org/ln2wwwdata/source/cfg.tsv\n   Output Subdomain\n      Name: rat_glycan_xref_cfg.csv\n      URI: http://data.glygen.org/ln2wwwdata/reviewed/rat_glycan_xref_cfg.csv\n      Name: rat_glycan_xref_cfg.stat.csv\n      URI: http://data.glygen.org/ln2wwwdata/reviewed/rat_glycan_xref_cfg.stat.csv\n\nFields\n      Name: \"database_id\"\n     Description: \"Identifier in the database\"\n      Unique Values: \"252\"\n      Name: \"glytoucan_ac\"\n     Description: \"\"\n      Unique Values: \"137\"\n      Name: \"database_label\"\n     Description: \"Label or name assigned to the corresponding identifier in the source database\"\n      Unique Values: \"1\"",
    "downloadurl": "/ln2data/releases/data/v-1.4.5/reviewed/rat_glycan_xref_cfg.csv"
}
