{
    "bcoid": "GLY_000012",
    "title": "Mouse UniProtKB Protein Canonical sequences",
    "description": "The Mouse UniProtKB Protein Canonical sequences dataset contains mouse [taxid:10090] protein fasta sequences ...",
    "filename": "mouse_protein_canonicalsequences.fasta",
    "filetype": "fasta",
    "categories": {
        "species": "Mus Musculus",
        "molecule": "Protein",
        "tags": "Canonical Protein fasta Sequences",
        "file_type": "fasta",
        "status": "Reviewed",
        "scope": "internal"
    },
    "iconfilename": "fasta_icon_all.png",
    "sampledata": {
        "type": "html",
        "data": "<pre>\n>sp|Q8BH24-1|TM9S4_MOUSE Transmembrane 9 superfamily member 4 OS=Mus musculus GN=Tm9sf4\nMAAAMIWWPRFLLLLCLTCKGSTFYVPGVAPINFHQNDPVEIKAVKLTSSRTQLPYEYYS\nLPFCQPIKITYKAENLGEVLRGDRIVNTPFQVLMNSEKKCEVLCNQSNKPITLTVEQSRL\nVAERITEEYYVHLIADNLPVATRLELYSSNRDSDDKKKEKDVQFEHGYRLGFTDVNKIYL\nHNHLSFILYYHREDMEEDQEHTYRVVRFEVIPQSIRLEDLKTGEKSSCTLPEGANSLPQE\nIDPTKENQLYFTYSVHWEESDIKWASRWDTYLTMSDVQIHWFSIINSVVVVFFLSGILSM\nIIIRTLRKDIANYNKEDDIEDTMEESGWKLVHGDVFRPPQYPMILSSLLGSGIQLFCMIL\nIVIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGRLYRTLKGHRWKKGAFCTATL\nYPGVVFGICFVLNCFIWGKHSSGAVPFPTMVALLCMWFGISLPLVYLGYYFGFRKQPYDN\nPVRTNQIPRQIPEQRWYMNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFL\nVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEF\nIPSLLYFGYTTLMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID\n\n\n>sp|Q8BH27-1|MEGF9_MOUSE Multiple epidermal growth factor-like domains protein 9 OS=Mus musculus GN=Megf9\nMNGGAERAMRSLPSLGGLALLCCAAAAAASTASAGNVTGGGGAEGQVVPSPSPGLRDQAS\nSPFPKTAAPTAQAPRTGPPRTTVRKTGATTPSAGSPEIIPPLRTSAQPAATPFPALDLSP\nATPSEDGHTPTTESPPSRPAPTTLASTVGQPPTTSVVTTAQASSTPGTPTAESPDRSSNS\nSGVPPTAPVTEAPTSPPPEHMCNCSEVGSLDVKRCNQTTGQCDCHVGYQGLHCDTCKEGF\nYLNHTVGLCLPCHCSPHGAVSILCNSSGNCQCKVGVTGSMCDKCQDGHYGFGKTGCLPCQ\nCNNRSDSCDVHTGACLNCQENSKGEHCEECKEGFYPSPDAAKQCHRCPCSAVTSTGNCTI\nESGELEPTCDQCKDGYTGQNCNKCENGYYNSDSICTQCECHGHVDPIKTPKICKPESGEC\nINCLHNTTGFWCEKCLEGYVRDLQRNCIKQEVIVPTPEGSTILVSNASLTTSVPTPVINS\nTFAPTTLQTIFAVSSSENSTSALADVSWTQFNIIILTVIIIVVVLLMGFVGAVYMYREYQ\nNRKLNAPFWTIELKEDNISFSSYHDSIPNADVSGLLEDDANEVAPNGQLTLTTPIHNYKA\n\n\n>sp|Q8BH26-1|TM251_MOUSE Transmembrane protein 251 OS=Mus musculus GN=Tmem251\nMPKAPDCSELSDSCSLAGGTGRFSGPLHRAWRMMNFRQRMGWIGVGLYLLASAAAFYYVF\nEINETYNRLALEHILQHPEEPREGTTWTHSLKARLLSLPFWLWTIIFLIPYLQMFLFLYS\nCTRADPKTVGYCIIPICLAVICNRHQAFVKASNQISRLQLIDT\n\n\n>tr|Q8VF69-1|Q8VF69_MOUSE Olfactory receptor OS=Mus musculus GN=Olfr223\nMQVTTERQNVSFPDTFVLVGFSDHPWLEMPLFGVLLISYIFTMIGNSSIIVLSLVEPRLQ\nTPMYFFLDNLSLLDLCVTCTIVPQLLVNLWGPEKTIASWSCIAQAYLFHWTSCTESALLA\nVMAFDRYVAICCPLRYVLIMHLWACVWLAAVCWASGLANSLVQATLTLYLTLCAKNTLDH\nFFCEVPALIKLACSDTTTNDLSLALGAIPFGIVSPLTVLISYIFIARAVLKLPSAEGRRK\nALSTCTSHLLVVTMYFGPGMYTYLQPPGNNTQSEFLSLFYCVFTPLLNPLIYTLRNKDVK\nEAWKKVLTSQSKGISLKGQ\n\n\n>sp|Q9JHR7-1|IDE_MOUSE Insulin-degrading enzyme OS=Mus musculus GN=Ide\nMRNGLVWLLHPALPGTLRSILGARPPPAKRLCGFPKQTYSTMSNPAIQRIEDQIVKSPED\nKREYRGLELANGIKVLLISDPTTDKSSAALDVHIGSLSDPPNIPGLSHFCEHMLFLGTKK\nYPKENEYSQFLSEHAGSSNAFTSGEHTNYYFDVSHEHLEGALDRFAQFFLCPLLDASCKD\nREVNAVDSEHEKNVMNDAWRLFQLEKATGNPKHPFSKFGTGNKYTLETRPNQEGIDVREE\nLLKFHSTYYSSNLMAICVLGRESLDDLTNLVVKLFSEVENKNVPLPEFPEHPFQEEHLRQ\nLYKIVPIKDIRNLYVTFPIPDLQQYYKSNPGYYLGHLIGHEGPGSLLSELKSKGWVNTLV\nGGQKEGARGFMFFIINVDLTEEGLLHVEDIILHMFQYIQKLRAEGPQEWVFQECKDLNAV\nAFRFKDKERPRGYTSKIAGKLHYYPLNGVLTAEYLLEEFRPDLIDMVLDKLRPENVRVAI\nVSKSFEGKTDRTEQWYGTQYKQEAIPEDVIQKWQNADLNGKFKLPTKNEFIPTNFEILSL\nEKDATPYPALIKDTAMSKLWFKQDDKFFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELL\nKDSLNEYAYAAELAGLSYDLQNTIYGMYLSVKRYNDKQPILLKKITEKMATFEIDKKRFE\nIIKEAYMRSLNNFRAEQPHQHAMYYLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLL\nSRLHIEALLHGNITKQAALGVMQMVEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQ\nQRNEVHNNCGIEIYYQTDMQSTSENMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRA\nNGIQGLRFIIQSEKPPHYLESRVEAFLITMEKAIEDMTEEAFQKHIQALAIRRLDKPKKL\nSAECAKYWGEIISQQYNYDRDNIEVAYLKTLTKDDIIRFYQEMLAVDAPRRHKVSVHVLA\nREMDSCPVVGEFPSQNDINLSEAPPLPQPEVIHNMTEFKRGLPLFPLVKPHINFMAAKL\n\n\n>tr|Q8VF63-1|Q8VF63_MOUSE  OS=Mus musculus GN=Olfr881\nMNWGRMALGNDSSVKEFILLGLTQQPELQLPLFFFFLGVYIFSVVGNLGLIVLIVLNPHL\nQTPMYYFLFNLSFTDLCYSSVITPKMLVSFVKQNIISHAECMTQLFFFCFFVIDECYILT\nAMAYDRYAAICKPLLYQVTMSHRVCLLMTVGVYVMGFVEAMAHTASMVHLIFCDSNIINH\nYMCEINALLKLSCTSTSINELVVYIVVGFNVIVPTLTIFITYTLILFNILSIHSAEGRSK\nAFSTCGSHMIAVSLFFGAAAFMYLKPSSASEDEDKVSTIFYTIMGPMLNPFIYSIRNKDV\nHIALKKTLKRSIFI\n\n\n>tr|Q8VF60-1|Q8VF60_MOUSE Olfactory receptor OS=Mus musculus GN=Olfr291\nMEMDVYNLTTVTQFILIGLSDLPEVRYPLFVAFVIIYQITLLGNGLILLAIVTEKKLQTP\nMYYLLANLSLLDIFCPSATVPKMLKNLLTEDHSISFVGCALQLYFLVALAGTEVFLLAVM\nAYDRYVAICFPLRYSLIMTKVRCVQLLFGTWAAGFLNSFVHTMSTFSLSFCKSNRVNQYY\nCDIPPVVALSCSSTYMAEVLLLVIASIFGVGAFLITLISYIYIVSTILKIRSAEGKRKAF\nSTCASHLLVVFLFYGTTIFTYMRPTSSQHSPGRDRLISMLYGVITPMLNPIIYSLRNTEV\nKGALRKVLHLRICSQTA\n\n\n>sp|Q8VF66-1|OL469_MOUSE Olfactory receptor 469 OS=Mus musculus GN=Olfr469\nMAFLEDANHTAVTEFILLGLTDDPVLKVVLFSIILCIYLVTVSGNLSTILLIRVSSQLHH\nPMYFFLSHLASVDVGYSSTVTPKMLANFLVERSTISYLGCTIQLFSGAFFGTLECFLLAT\nMAYDRFIAICNPLLYSTKMSTQVCIQLLVGSYIGGFLNASSFLLSFFPLLFCGPNRVNHF\nFCDLAPLIELSCSGSNVPIVPASFCSAFVIIVTVFVIAISYTYILITILKMRSTEGRQKA\nFSTCTSHLTAVTLFYGTITFIYVMPKSSFSTDQNKVVSVFYMVVIPMLNPLIYSLRNNEI\nKGALKRQLARKIFS\n\n\n>sp|Q8VF65-1|OL470_MOUSE Olfactory receptor 470 OS=Mus musculus GN=Olfr470\nMAFLEDGNHTAVTEFVLFGLTDDPVLRVILFIIFLCIYLVNVSGNLSTILLIRVSSQLHH\nPMYFFLSHLASVDVGYSSTVTPKMLANFLLERSTISYLGCTIQLFSGAFVGTLECFLLAT\nMAYDRFIAICNPLLYSTKMSTQVCIQLLVGSYIGGFLNASSFLLSFFPLLFCGPNRVNHY\nSCDLTPLIELSCSGSNVPIVPASFCSAFVIIVTVSVIAISYTYILITILKMRSTEGRQKA\nFSTCTSHLTAVTLYYGTVTFIYVMPKSSYSTDQNKVVSVFYTVVIPMLNPIIYSLRNNEI\nKGALKRQLARKIFS\n\n\n</pre>"
    },
    "readme": "Name\n   - Mouse UniProtKB Protein Canonical sequences\n\nVersion\n   - 1.4.5\n\nCreated on\n  - 2019-01-23T17:21:05.878935\n\nModified on\n   - 2019-04-25T19:05:19.668303\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Rahi Navelkar [rsn13@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Xavier Holmes [xavierh@email.gwu.edu]\n\nAuthors\n   - Maria Martin [martin@ebi.ac.uk], Preethi Vasudev [pvasudev@ebi.ac.uk]\n\nChecksum\n   - \n\nUsability Domain\n   - The Mouse UniProtKB Protein Canonical sequences dataset contains mouse [taxid:10090] protein fasta sequences sequences for the mouse canonical sequences from UniProtKB database. The dataset is derived from 2019-05 UniProt release. The dataset is contributed by EMBL-EBI-UniProtKB and processed by GlyGen. If you use this dataset please provide proper attribution to EMBL-EBI-UniProtKB and GlyGen\n\nDescription Domain\n   Keywords\n   - protein sequence\n   - fasta\n   - canonical accessions\n\n   Pipeline Steps\n   - Step-1: The script loads the UniProtKB fasta sequence for all mouse canonical accessions data from the triplestore containing triples from nt file and extracts it into a dataset as fasta format\n\nExecution Domain\n   Scripts   - https://github.com/GW-HIVE/glygen-backend-integration/blob/master/pipeline/integrator/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: uniprot-proteome-10090-mus-musculus-2019-05.nt\n      URI: https://data.glygen.org/ln2wwwdata/source/uniprot-proteome-10090-mus-musculus-2019-05.nt\n   Output Subdomain\n      Name: mouse_protein_canonicalsequences.fasta\n      URI: http://data.glygen.org/ln2wwwdata/reviewed/mouse_protein_canonicalsequences.fasta\n      Name: mouse_protein_canonicalsequences.stat.csv\n      URI: http://data.glygen.org/ln2wwwdata/reviewed/mouse_protein_canonicalsequences.stat.csv\n\nFields\n      Name: \"sequence\"\n     Description: \"Amino acid sequence\"\n      Unique Values: \"22282\"",
    "downloadurl": "/ln2data/releases/data/v-1.4.5/reviewed/mouse_protein_canonicalsequences.fasta"
}