{ "bcoid": "GLY_000235", "title": "Mouse RefSeq Citations", "description": "The Mouse RefSeq Citations datasets conatains mouse [taxid:10090] UniProtKB accessions mapped to publication ...", "filename": "mouse_protein_citations_refseq.csv", "filetype": "csv", "categories": { "species": "Mus Musculus", "molecule": "Protein", "tags": "Protein Citations", "file_type": "csv", "status": "Reviewed", "scope": "internal" }, "minitable": { "content": [ [ "Q8BVG4-1...", "29693275..." ], [ "Q8BVG4-1...", "29709545..." ] ], "headers": [ "uniprotkb_ca...", "pmid..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "uniprotkb_canonical_ac" }, { "type": "string", "label": "pmid" }, { "type": "string", "label": "title" }, { "type": "string", "label": "journal_name" }, { "type": "string", "label": "publication_date" }, { "type": "string", "label": "authors" } ], [ "Q8BVG4-1", "29693275", "The effect of CD26-deficiency on dipeptidyl peptidase 8 and 9 expression profiles in a mouse model of Crohn's disease.", "Journal of cellular biochemistry", "2018 Aug", "Buljevic S, Detel D, Pugel EP, Varljen J" ], [ "Q8BVG4-1", "29709545", "DPP9 enzymatic activity in hematopoietic cells is dispensable for mouse hematopoiesis.", "Immunology letters", "2018 Jun", "Kim M, von Muenchow L, Le Meur T, Kueng B, Gapp B, Weber D, Dietrich W, Kovarik J, Rolink AG, Ksiazek I" ], [ "Q8BVG4-1", "28887018", "DPP9 enzyme activity controls survival of mouse migratory tongue muscle progenitors and its absence leads to neonatal lethality due to suckling defect.", "Developmental biology", "2017 Nov 15", "Kim M, Minoux M, Piaia A, Kueng B, Gapp B, Weber D, Haller C, Barbieri S, Namoto K, Lorenz T, Wirsching J, Bassilana F, Dietrich W, Rijli FM, Ksiazek I" ], [ "Q8BVG4-1", "28256001", "Expression, subcellular localisation, and possible roles of dipeptidyl peptidase 9 (DPP9) in murine macrophages.", "Cell biochemistry and function", "2017 Mar", "Zapletal E, Cupic B, Gabrilovac J" ], [ "Q8BVG4-1", "23704821", "Regulation of dipeptidyl peptidase 8 and 9 expression in activated lymphocytes and injured liver.", "World journal of gastroenterology", "2013 May 21", "Chowdhury S, Chen Y, Yao TW, Ajami K, Wang XM, Popov Y, Schuppan D, Bertolino P, McCaughan GW, Yu DM, Gorrell MD" ], [ "Q8BVG4-1", "19581630", "The in vivo expression of dipeptidyl peptidases 8 and 9.", "The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society", "2009 Nov", "Yu DM, Ajami K, Gall MG, Park J, Lee CS, Evans KA, McLaughlin EA, Pitman MR, Abbott CA, McCaughan GW, Gorrell MD" ], [ "A0A0B4J1F4-1", "19605364", "Thioredoxin-independent regulation of metabolism by the alpha-arrestin proteins.", "The Journal of biological chemistry", "2009 Sep 11", "Patwari P, Chutkow WA, Cummings K, Verstraeten VL, Lammerding J, Schreiter ER, Lee RT" ], [ "Q9JMG3-1", "24240191", "Different functions of HOPS isoforms in the cell: HOPS shuttling isoform is determined by RIP cleavage system.", "Cell cycle (Georgetown, Tex.)", "2014", "Castelli M, Piobbico D, Bartoli D, Pieroni S, Brunacci C, Bellet MM, Chiacchiaretta M, Della Fazia MA, Servillo G" ], [ "Q9JMG3-1", "22890319", "Hepatocyte odd protein shuttling (HOPS) is a bridging protein in the nucleophosmin-p19 Arf network.", "Oncogene", "2013 Jul 11", "Castelli M, Pieroni S, Brunacci C, Piobbico D, Bartoli D, Bellet MM, Colombo E, Pelicci PG, Della Fazia MA, Servillo G" ], [ "Q9JMG3-1", "20582322", "Transmembrane and ubiquitin-like domain containing 1 (Tmub1) regulates locomotor activity and wakefulness in mice and interacts with CAMLG.", "PloS one", "2010 Jun 22", "Zhang W, Savelieva KV, Suwanichkul A, Small DL, Kirkpatrick LL, Xu N, Lanthorn TH, Ye GL" ], [ "Q9JMG3-1", "18665261", "Transmembrane and ubiquitin-like domain-containing protein 1 (Tmub1/HOPS) facilitates surface expression of GluR2-containing AMPA receptors.", "PloS one", "2008 Jul 30", "Yang H, Takagi H, Konishi Y, Ageta H, Ikegami K, Yao I, Sato S, Hatanaka K, Inokuchi K, Seog DH, Setou M" ], [ "Q9JMG3-1", "18418082", "HOPS is an essential constituent of centrosome assembly.", "Cell cycle (Georgetown, Tex.)", "2008 May 15", "Pieroni S, Della Fazia MA, Castelli M, Piobbico D, Bartoli D, Brunacci C, Bellet MM, Viola-Magni M, Servillo G" ], [ "Q8K4Z0-1", "19833108", "Regional distribution of the leucine-rich glioma inactivated (LGI) gene family transcripts in the adult mouse brain.", "Brain research", "2010 Jan 11", "Herranz-Perez V, Olucha-Bordonau FE, Morante-Redolat JM, Perez-Tur J" ], [ "O88845-1", "17485678", "Gene-trapped mouse embryonic stem cell-derived cardiac myocytes and human genetics implicate AKAP10 in heart rhythm regulation.", "Proceedings of the National Academy of Sciences of the United States of America", "2007 May 15", "Tingley WG, Pawlikowska L, Zaroff JG, Kim T, Nguyen T, Young SG, Vranizan K, Kwok PY, Whooley MA, Conklin BR" ], [ "O88845-1", "14531807", "PDZK1: II. an anchoring site for the PKA-binding protein D-AKAP2 in renal proximal tubular cells.", "Kidney international", "2003 Nov", "Gisler SM, Madjdpour C, Bacic D, Pribanic S, Taylor SS, Biber J, Murer H" ], [ "O88845-1", "12206784", "Domain organization of D-AKAP2 revealed by enhanced deuterium exchange-mass spectrometry (DXMS).", "Journal of molecular biology", "2002 Aug 23", "Hamuro Y, Burns L, Canaves J, Hoffman R, Taylor S, Woods V" ], [ "Q8BSN9-1", "20869947", "Fast kinase domain-containing protein 3 is a mitochondrial protein essential for cellular respiration.", "Biochemical and biophysical research communications", "2010 Oct 22", "Simarro M, Gimenez-Cassina A, Kedersha N, Lazaro JB, Adelmant GO, Marto JA, Rhee K, Tisdale S, Danial N, Benarafa C, Orduna A, Anderson P" ], [ "Q3UFT3-1", "24003223", "A brain-specific Grb2-associated regulator of extracellular signal-regulated kinase (Erk)/mitogen-activated protein kinase (MAPK) (GAREM) subtype, GAREM2, contributes to neurite outgrowth of neuroblastoma cells by regulating Erk signaling.", "The Journal of biological chemistry", "2013 Oct 11", "Taniguchi T, Tanaka S, Ishii A, Watanabe M, Fujitani N, Sugeo A, Gotoh S, Ohta T, Hiyoshi M, Matsuzaki H, Sakai N, Konishi H" ], [ "P58269-1", "18765789", "Regulation of muscle development by DPF3, a novel histone acetylation and methylation reader of the BAF chromatin remodeling complex.", "Genes & development", "2008 Sep 1", "Lange M, Kaynak B, Forster UB, Tonjes M, Fischer JJ, Grimm C, Schlesinger J, Just S, Dunkel I, Krueger T, Mebus S, Lehrach H, Lurz R, Gobom J, Rottbauer W, Abdelilah-Seyfried S, Sperling S" ], [ "Q571F8-1", "22679499", "Mammalian glutaminase Gls2 gene encodes two functional alternative transcripts by a surrogate promoter usage mechanism.", "PloS one", "2012", "Martin-Rufian M, Tosina M, Campos-Sandoval JA, Manzanares E, Lobo C, Segura JA, Alonso FJ, Mates JM, Marquez J" ], [ "Q571F8-1", "20351271", "Phosphate-activated glutaminase (GLS2), a p53-inducible regulator of glutamine metabolism and reactive oxygen species.", "Proceedings of the National Academy of Sciences of the United States of America", "2010 Apr 20", "Suzuki S, Tanaka T, Poyurovsky MV, Nagano H, Mayama T, Ohkubo S, Lokshin M, Hosokawa H, Nakayama T, Suzuki Y, Sugano S, Sato E, Nagao T, Yokote K, Tatsuno I, Prives C" ], [ "Q9D4J7-1", "28607179", "PHF6 regulates phenotypic plasticity through chromatin organization within lineage-specific genes.", "Genes & development", "2017 May 15", "Soto-Feliciano YM, Bartlebaugh JME, Liu Y, Sanchez-Rivera FJ, Bhutkar A, Weintraub AS, Buenrostro JD, Cheng CS, Regev A, Jacks TE, Young RA, Hemann MT" ], [ "Q9D4J7-1", "25556700", "miR-128 regulates neuronal migration, outgrowth and intrinsic excitability via the intellectual disability gene Phf6.", "eLife", "2015 Jan 3", "Franzoni E, Booker SA, Parthasarathy S, Rehfeld F, Grosser S, Srivatsa S, Fuchs HR, Tarabykin V, Vida I, Wulczyn FG" ], [ "Q9D4J7-1", "23791194", "The X-linked intellectual disability protein PHF6 associates with the PAF1 complex and regulates neuronal migration in the mammalian brain.", "Neuron", "2013 Jun 19", "Zhang C, Mejia LA, Huang J, Valnegri P, Bennett EJ, Anckar J, Jahani-Asl A, Gallardo G, Ikeuchi Y, Yamada T, Rudnicki M, Harper JW, Bonni A" ], [ "Q9D4J7-1", "17698420", "Protein and gene expression analysis of Phf6, the gene mutated in the Borjeson-Forssman-Lehmann Syndrome of intellectual disability and obesity.", "Gene expression patterns : GEP", "2007 Oct", "Voss AK, Gamble R, Collin C, Shoubridge C, Corbett M, Gecz J, Thomas T" ], [ "Q9WU01-1", "25505328", "Alternative splicing coupled nonsense-mediated decay generates neuronal cell type-specific expression of SLM proteins.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2014 Dec 10", "Traunmuller L, Bornmann C, Scheiffele P" ], [ "Q9WU01-1", "15471878", "The nuclear tyrosine kinase BRK/Sik phosphorylates and inhibits the RNA-binding activities of the Sam68-like mammalian proteins SLM-1 and SLM-2.", "The Journal of biological chemistry", "2004 Dec 24", "Haegebarth A, Heap D, Bie W, Derry JJ, Richard S, Tyner AL" ], [ "Q9WU01-1", "12397030", "Skeletal muscle LIM protein 1 regulates integrin-mediated myoblast adhesion, spreading, and migration.", "American journal of physiology. Cell physiology", "2003 Mar", "Robinson PA, Brown S, McGrath MJ, Coghill ID, Gurung R, Mitchell CA" ], [ "Q8VBX4-1", "30254197", "RARalpha supports the development of Langerhans cells and langerin-expressing conventional dendritic cells.", "Nature communications", "2018 Sep 25", "Hashimoto-Hill S, Friesen L, Park S, Im S, Kaplan MH, Kim CH" ], [ "Q149C2-1", "19253336", "Characterization of mouse IFT complex B.", "Cell motility and the cytoskeleton", "2009 Aug", "Follit JA, Xu F, Keady BT, Pazour GJ" ], [ "Q6NZM9-1", "30134825", "Myocyte-specific overexpressing HDAC4 promotes myocardial ischemia/reperfusion injury.", "Molecular medicine (Cambridge, Mass.)", "2018 Jul 17", "Zhang L, Wang H, Zhao Y, Wang J, Dubielecka PM, Zhuang S, Qin G, Chin YE, Kao RL, Zhao TC" ], [ "Q6NZM9-1", "29632070", "Histone deacetylase 4 shapes neuronal morphology via a mechanism involving regulation of expression of vascular endothelial growth factor D.", "The Journal of biological chemistry", "2018 May 25", "Litke C, Bading H, Mauceri D" ], [ "Q8K120-1", "29467254", "BDNF activates an NFI-dependent neurodevelopmental timing program by sequestering NFATc4.", "Molecular biology of the cell", "2018 Apr 15", "Ding B, Dobner PR, Mullikin-Kilpatrick D, Wang W, Zhu H, Chow CW, Cave JW, Gronostajski RM, Kilpatrick DL" ], [ "Q8K120-1", "27307045", "Neuritin Up-regulates Kv4.2 alpha-Subunit of Potassium Channel Expression and Affects Neuronal Excitability by Regulating the Calcium-Calcineurin-NFATc4 Signaling Pathway.", "The Journal of biological chemistry", "2016 Aug 12", "Yao JJ, Zhao QR, Liu DD, Chow CW, Mei YA" ], [ "Q8K120-1", "12370307", "Targeted disruption of NFATc3, but not NFATc4, reveals an intrinsic defect in calcineurin-mediated cardiac hypertrophic growth.", "Molecular and cellular biology", "2002 Nov", "Wilkins BJ, De Windt LJ, Bueno OF, Braz JC, Glascock BJ, Kimball TF, Molkentin JD" ], [ "Q8K120-1", "11997522", "Phosphorylation of NFATc4 by p38 mitogen-activated protein kinases.", "Molecular and cellular biology", "2002 Jun", "Yang TT, Xiong Q, Enslen H, Davis RJ, Chow CW" ], [ "J3QNX5-1", "26623514", "Auxiliary subunits of the CKAMP family differentially modulate AMPA receptor properties.", "eLife", "2015 Dec 1", "Farrow P, Khodosevich K, Sapir Y, Schulmann A, Aslam M, Stern-Bach Y, Monyer H, von Engelhardt J" ], [ "Q0VBL6-1", "29054108", "Increase in proapoptotic activity of inhibitory PAS domain protein via phosphorylation by MK2.", "The FEBS journal", "2017 Dec", "Kasai S, Richardson MJE, Torii S, Yasumoto KI, Shima H, Igarashi K, Itoh K, Sogawa K, Murayama K" ], [ "Q0VBL6-1", "25847716", "Differential regulation of HIF-3alpha in LPS-induced BV-2 microglial cells: Comparison and characterization with HIF-1alpha.", "Brain research", "2015 Jun 12", "Kumar H, Lim JH, Kim IS, Choi DK" ], [ "Q0VBL6-1", "25626335", "Hypoxia-inducible factor-3alpha promotes angiogenic activity of pulmonary endothelial cells by repressing the expression of the VE-cadherin gene.", "Genes to cells : devoted to molecular & cellular mechanisms", "2015 Mar", "Kobayashi S, Yamashita T, Ohneda K, Nagano M, Kimura K, Nakai H, Poellinger L, Ohneda O" ], [ "Q0VBL6-1", "17125738", "Non-hypoxic induction of HIF-3alpha by 2-deoxy-D-glucose and insulin.", "Biochemical and biophysical research communications", "2007 Jan 12", "Heidbreder M, Qadri F, Johren O, Dendorfer A, Depping R, Frohlich F, Wagner KF, Dominiak P" ], [ "Q0VBL6-1", "12119283", "Inhibitory PAS domain protein (IPAS) is a hypoxia-inducible splicing variant of the hypoxia-inducible factor-3alpha locus.", "The Journal of biological chemistry", "2002 Sep 6", "Makino Y, Kanopka A, Wilson WJ, Tanaka H, Poellinger L" ], [ "Q0VBL6-1", "9840812", "Molecular characterization and chromosomal localization of a third alpha-class hypoxia inducible factor subunit, HIF3alpha.", "Gene expression", "1998", "Gu YZ, Moran SM, Hogenesch JB, Wartman L, Bradfield CA" ], [ "Q32M07-1", "24740601", "Adenine nucleotide metabolism and a role for AMP in modulating flagellar waveforms in mouse sperm.", "Biology of reproduction", "2014 Jun", "Vadnais ML, Cao W, Aghajanian HK, Haig-Ladewig L, Lin AM, Al-Alao O, Gerton GL" ], [ "Q32M07-1", "21746835", "Congenital hydrocephalus in genetically engineered mice.", "Veterinary pathology", "2012 Jan", "Vogel P, Read RW, Hansen GM, Payne BJ, Small D, Sands AT, Zambrowicz BP" ], [ "Q8K3W0-2", "28436570", "Bre Enhances Osteoblastic Differentiation by Promoting the Mdm2-Mediated Degradation of p53.", "Stem cells (Dayton, Ohio)", "2017 Jul", "Jin F, Wang Y, Wang X, Wu Y, Wang X, Liu Q, Zhu Y, Liu E, Fan J, Wang Y" ], [ "Q8K3W0-2", "27001068", "BRE plays an essential role in preventing replicative and DNA damage-induced premature senescence.", "Scientific reports", "2016 Mar 22", "Shi W, Tang MK, Yao Y, Tang C, Chui YL, Lee KKH" ], [ "Q8K3W0-2", "24395041", "Anti-apoptotic protein BRE/BRCC45 attenuates apoptosis through maintaining the expression of caspase inhibitor XIAP in mouse Lewis lung carcinoma D122 cells.", "Apoptosis : an international journal on programmed cell death", "2014 May", "Chui YL, Ma CH, Li W, Xu Z, Yao Y, Lin FK, Chan JY, Lee KK" ], [ "Q8K3W0-2", "14565866", "Expression of a conserved mouse stress-modulating gene, Bre: comparison with the human ortholog.", "DNA and cell biology", "2003 Aug", "Ching AK, Li Q, Lim PL, Chan JY, Chui YL" ], [ "Q9DB75-1", "24139803", "CDIP1-BAP31 complex transduces apoptotic signals from endoplasmic reticulum to mitochondria under endoplasmic reticulum stress.", "Cell reports", "2013 Oct 31", "Namba T, Tian F, Chu K, Hwang SY, Yoon KW, Byun S, Hiraki M, Mandinova A, Lee SW" ], [ "Q91V88-1", "28842827", "Nephronectin is Decreased in Metastatic Breast Carcinoma and Related to Metastatic Organs.", "Pathology oncology research : POR", "2018 Jul", "Dilmac S, Erin N, Demir N, Tanriover G" ], [ "Q91V88-1", "28345658", "Nephronectin plays critical roles in Sox2 expression and proliferation in dental epithelial stem cells via EGF-like repeat domains.", "Scientific reports", "2017 Mar 27", "Arai C, Yoshizaki K, Miyazaki K, Saito K, Yamada A, Han X, Funada K, Fukumoto E, Haruyama N, Iwamoto T, Takahashi I, Fukumoto S" ], [ "Q91V88-1", "28093227", "Wnt/beta-catenin signaling activates nephronectin expression in osteoblasts.", "Biochemical and biophysical research communications", "2017 Mar 4", "Ikehata M, Yamada A, Morimura N, Itose M, Suzawa T, Shirota T, Chikazu D, Kamijo R" ], [ "Q91V88-1", "17537792", "The ECM protein nephronectin promotes kidney development via integrin alpha8beta1-mediated stimulation of Gdnf expression.", "Development (Cambridge, England)", "2007 Jul", "Linton JM, Martin GR, Reichardt LF" ], [ "Q80XD1-1", "27058424", "A new role of the Rac-GAP beta2-chimaerin in cell adhesion reveals opposite functions in breast cancer initiation and tumor progression.", "Oncotarget", "2016 May 10", "Casado-Medrano V, Barrio-Real L, Garcia-Rostan G, Baumann M, Rocks O, Caloca MJ" ], [ "Q80XD1-1", "22726444", "The RacGAP beta2-Chimaerin selectively mediates axonal pruning in the hippocampus.", "Cell", "2012 Jun 22", "Riccomagno MM, Hurtado A, Wang H, Macopson JG, Griner EM, Betz A, Brose N, Kazanietz MG, Kolodkin AL" ], [ "Q80XD1-1", "20335173", "A novel cross-talk in diacylglycerol signaling: the Rac-GAP beta2-chimaerin is negatively regulated by protein kinase Cdelta-mediated phosphorylation.", "The Journal of biological chemistry", "2010 May 28", "Griner EM, Caino MC, Sosa MS, Colon-Gonzalez F, Chalmers MJ, Mischak H, Kazanietz MG" ], [ "Q9JLZ6-1", "24748541", "HIC2 is a novel dosage-dependent regulator of cardiac development located within the distal 22q11 deletion syndrome region.", "Circulation research", "2014 Jun 20", "Dykes IM, van Bueren KL, Ashmore RJ, Floss T, Wurst W, Szumska D, Bhattacharya S, Scambler PJ" ], [ "Q9Z1B7-1", "29979672", "p38alpha blocks brown adipose tissue thermogenesis through p38delta inhibition.", "PLoS biology", "2018 Jul", "Matesanz N, Nikolic I, Leiva M, Pulgarin-Alfaro M, Santamans AM, Bernardo E, Mora A, Herrera-Melle L, Rodriguez E, Beiroa D, Caballero A, Martin-Garcia E, Acin-Perez R, Hernandez-Cosido L, Leiva-Vega L, Torres JL, Centeno F, Nebreda AR, Enriquez JA, Nogueiras R, Marcos M, Sabio G" ], [ "P05208-1", "20179351", "Elastase 2 is expressed in human and mouse epidermis and impairs skin barrier function in Netherton syndrome through filaggrin and lipid misprocessing.", "The Journal of clinical investigation", "2010 Mar", "Bonnart C, Deraison C, Lacroix M, Uchida Y, Besson C, Robin A, Briot A, Gonthier M, Lamant L, Dubus P, Monsarrat B, Hovnanian A" ], [ "Q9WUP7-1", "23500140", "Ubiquitin C-terminal hydrolase-L5 is required for high glucose-induced transforming growth factor-beta receptor I expression and hypertrophy in mesangial cells.", "Archives of biochemistry and biophysics", "2013 Jul 15", "Ko YM, Chang CY, Chiou SJ, Hsu FJ, Huang JS, Yang YL, Guh JY, Chuang LY" ], [ "Q9WUP7-1", "23341450", "Ubiquitinated proteins activate the proteasomal ATPases by binding to Usp14 or Uch37 homologs.", "The Journal of biological chemistry", "2013 Mar 15", "Peth A, Kukushkin N, Bosse M, Goldberg AL" ], [ "Q9WUP7-1", "21048919", "Regulators of the proteasome pathway, Uch37 and Rpn13, play distinct roles in mouse development.", "PloS one", "2010 Oct 27", "Al-Shami A, Jhaver KG, Vogel P, Wilkins C, Humphries J, Davis JJ, Xu N, Potter DG, Gerhardt B, Mullinax R, Shirley CR, Anderson SJ, Oravecz T" ], [ "Q8BGC0-1", "24352707", "Effects of chronic HIV-1 Tat exposure in the CNS: heightened vulnerability of males versus females to changes in cell numbers, synaptic integrity, and behavior.", "Brain structure & function", "2015 Mar", "Hahn YK, Podhaizer EM, Farris SP, Miles MF, Hauser KF, Knapp PE" ], [ "Q8BGC0-1", "15485897", "FF domains of CA150 bind transcription and splicing factors through multiple weak interactions.", "Molecular and cellular biology", "2004 Nov", "Smith MJ, Kulkarni S, Pawson T" ], [ "Q8CEC0-1", "18621024", "Tumor marker nucleoporin 88 kDa regulates nucleocytoplasmic transport of NF-kappaB.", "Biochemical and biophysical research communications", "2008 Sep 26", "Takahashi N, van Kilsdonk JW, Ostendorf B, Smeets R, Bruggeman SW, Alonso A, van de Loo F, Schneider M, van den Berg WB, Swart GW" ], [ "Q8CEC0-1", "18606815", "Nucleoporin 88 (Nup88) is regulated by hypertonic stress in kidney cells to retain the transcription factor tonicity enhancer-binding protein (TonEBP) in the nucleus.", "The Journal of biological chemistry", "2008 Sep 5", "Andres-Hernando A, Lanaspa MA, Rivard CJ, Berl T" ], [ "Q8JZQ2-1", "27911893", "The Mitochondrial m-AAA Protease Prevents Demyelination and Hair Greying.", "PLoS genetics", "2016 Dec", "Wang S, Jacquemyn J, Murru S, Martinelli P, Barth E, Langer T, Niessen CM, Rugarli EI" ], [ "Q14A28-1", "29197014", "EG-VEGF Maintenance Over Early Gestation to Develop a Pregnancy-Induced Hypertensive Animal Model.", "Methods in molecular biology (Clifton, N.J.)", "2018", "Reynaud D, Sergent F, Abi Nahed R, Brouillet S, Benharouga M, Alfaidy N" ], [ "Q14A28-1", "26081281", "PPARgamma controls pregnancy outcome through activation of EG-VEGF: new insights into the mechanism of placental development.", "American journal of physiology. 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If you use this dataset please provide proper attribution to NCBI RefSeq and GlyGen\n\nDescription Domain\n Keywords\n - PMID\n - journal\n - citations\n - authors\n - RefSeq\n - PubMed\n\n Pipeline Steps\n - Step-1: The script parses the NCBI RefSeq gpff files to extract the publication information. The script also maps RefSeq accesion to the UniProtKB Canonical accessions\n\nExecution Domain\n Scripts - https://github.com/GW-HIVE/glygen-backend-integration/blob/master/pipeline/integrator/make-protein-dataset.py\n\n\n Software Prerequisites\n Name: Python\n Version: 2.7.5\n URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n Input Subdomain\n Name: refseq_protein_all_10090.gpff\n URI: https://data.glygen.org/ln2data/releases/data/v-1.4.5/source/refseq_protein_all_10090.gpff\n Name: mouse_protein_xref_refseq.csv\n URI: https://data.glygen.org/ln2data/releases/data/v-1.4.5/reviewed/mouse_protein_xref_refseq.csv\n Output Subdomain\n Name: mouse_protein_citations_refseq.csv\n URI: http://data.glygen.org/ln2data/releases/data/v-1.4.5/reviewed/mouse_protein_citations_refseq.csv\n Name: mouse_protein_citations_refseq.stat.csv\n URI: http://data.glygen.org/ln2data/releases/data/v-1.4.5/reviewed/mouse_protein_citations_refseq.stat.csv\n\nFields\n Name: \"uniprotkb_canonical_ac\"\n Description: \"Accession assigned to the protein isoform chosen to be the canonical sequence to which all positional annotation refers in UniProtKB database\"\n Unique Values: \"4071\"\n Name: \"title\"\n Description: \"Title of the published article in the journal\"\n Unique Values: \"8145\"\n Name: \"journal_name\"\n Description: \"The name of the journal in which the article is published\"\n Unique Values: \"752\"\n Name: \"authors\"\n Description: \"\"\n Unique Values: \"8129\"\n Name: \"publication_date\"\n Description: \"Contains the full date on which the issue of the journal was published. Sourced from MEDLINE/PubMed data element(fields) description.\"\n Unique Values: \"2599\"\n Name: \"pmid\"\n Description: \"NCBI PubMed database Identifier\"\n Unique Values: \"8145\"", "downloadurl": "/ln2data/releases/data/v-1.4.5/reviewed/mouse_protein_citations_refseq.csv" }