{
    "bcoid": "GLY_000071",
    "title": "Mouse Glycan Images",
    "description": "List of Glycans identified by GlyTouCan Accessions with Images.",
    "filename": "mouse_glycan_images.csv",
    "filetype": "csv",
    "categories": {
        "species": "Mus musculus",
        "molecule": "Glycan",
        "tags": "Images",
        "status": "Reviewed",
        "file_type": "csv",
        "scope": "internal"
    },
    "minitable": {
        "content": [],
        "headers": [],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "",
        "data": ""
    },
    "readme": "Name\n   - Mouse Glycan Images\n\nVersion\n   - 1.4.5\n\nCreated on\n  - 2019-01-23T17:21:05.939826\n\nModified on\n   - 2019-09-12T10:13:29.563754\n\nCreated by\n   - Rahi Navelkar [rsn13@gwu.edu], Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Xavier Holmes [xavierh@email.gwu.edu]\n\nAuthors\n   - Nathan Edwards [nje5@georgetown.edu]\n\nChecksum\n   - \n\nUsability Domain\n   - List of Glycans identified by GlyTouCan Accessions with Images.\n\nDescription Domain\n   Keywords\n   - GlyTouCan\n   - Glycan\n   - Classification\n   - Motifs\n\n   Pipeline Steps\n   - Step-1: This file contains GlyTouCan accessions with images in CFG extended format. The List of GlyTouCans(glycan list) is compiled when the GlyTouCan accession is observed under one or more following criteria:  a) If the glycan has source/taxonomy annotation[taxid:10090] in GlyTouCan b) If the glycan is listed on mouse[taxid:10090] glycan webpage at UniCarbKB c) If the glycan is listed on a mouse[taxid:10090] protein webpage at UniCarbKB d) If the glycan is synthesized by a mouse[taxid:10090] protein [http://data.glygen.org/GLYDS00065] e) If the glycan is known to be attached to a mouse[taxid:10090] protein [http://data.glygen.org/GLYDS00041]. A python script[make-glycan_images-directory.py] was used to extract images for the compiled glycan list.\n\nExecution Domain\n   Scripts   - https://github.com/GW-HIVE/glygen-backend-integration/blob/master/pipeline/integrator/make-glycan-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: images.zip\n      URI: https://data.glygen.org/ln2data/releases/data/v-1.4.5/source/images.zip\n   Output Subdomain\n      Name: mouse_glycan_images.csv\n      URI: https://data.glygen.org/ln2data/releases/data/v-1.4.5/mouse_glycan_images.csv",
    "downloadurl": "/ln2data/releases/data/v-1.4.5/reviewed/mouse_glycan_images.csv"
}