{
    "bcoid": "GLY_000600",
    "title": "Glycan Evidence NCFG",
    "description": "-",
    "filename": "glycan_evidence_ncfg.csv",
    "filetype": "csv",
    "categories": {
        "molecule": "Glycan",
        "tags": "evidence NCFG",
        "status": "Reviewed",
        "file_type": "csv",
        "scope": "internal"
    },
    "minitable": {
        "content": [
            [
                "G39213VZ...",
                "GlcNAcb1-2Ma..."
            ],
            [
                "G29011JC...",
                "GlcNAcb1-2Ma..."
            ]
        ],
        "headers": [
            "glytoucan_ac...",
            "sequence..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "glytoucan_ac"
                },
                {
                    "type": "string",
                    "label": "sequence"
                },
                {
                    "type": "string",
                    "label": "tag"
                },
                {
                    "type": "string",
                    "label": "evidence"
                },
                {
                    "type": "string",
                    "label": "source"
                }
            ],
            [
                "G39213VZ",
                "GlcNAcb1-2Mana1-6(GlcNAcb1-2Mana1-3)Manb1-4GlcNAcb1-4GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G29011JC",
                "GlcNAcb1-2Mana1-6(GlcNAcb1-4(GlcNAcb1-2)Mana1-3)Manb1-4GlcNAcb1-4GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G10219AA",
                "GlcNAcb1-6(GlcNAcb1-2)Mana1-6(GlcNAcb1-2Mana1-3)Manb1-4GlcNAcb1-4GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G20030CU",
                "GlcNAcb1-6(GlcNAcb1-2)Mana1-6(GlcNAcb1-4(GlcNAcb1-2)Mana1-3)Manb1-4GlcNAcb1-4GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G80858MF",
                "GlcNAcb1-2Mana1-6(GlcNAcb1-2Mana1-3)Manb1-4GlcNAcb1-4(Fuca1-6)GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G61207RZ",
                "GlcNAcb1-2Mana1-6(GlcNAcb1-4(GlcNAcb1-2)Mana1-3)Manb1-4GlcNAcb1-4(Fuca1-6)GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G80393PG",
                "GlcNAcb1-6(GlcNAcb1-2)Mana1-6(GlcNAcb1-2Mana1-3)Manb1-4GlcNAcb1-4(Fuca1-6)GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G00176HZ",
                "GlcNAcb1-6(GlcNAcb1-2)Mana1-6(GlcNAcb1-4(GlcNAcb1-2)Mana1-3)Manb1-4GlcNAcb1-4(Fuca1-6)GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G36191CD",
                "Galb1-4GlcNAcb1-2Mana1-6(Galb1-4GlcNAcb1-2Mana1-3)Manb1-4GlcNAcb1-4GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G29857RC",
                "Galb1-4GlcNAcb1-2Mana1-6(Galb1-4GlcNAcb1-4(Galb1-4GlcNAcb1-2)Mana1-3)Manb1-4GlcNAcb1-4GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G79809MM",
                "Galb1-4GlcNAcb1-6(Galb1-4GlcNAcb1-2)Mana1-6(Galb1-4GlcNAcb1-2Mana1-3)Manb1-4GlcNAcb1-4GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G18938DW",
                "Galb1-4GlcNAcb1-6(Galb1-4GlcNAcb1-2)Mana1-6(Galb1-4GlcNAcb1-4(Galb1-4GlcNAcb1-2)Mana1-3)Manb1-4GlcNAcb1-4GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G78059CC",
                "Galb1-4GlcNAcb1-2Mana1-6(Galb1-4GlcNAcb1-2Mana1-3)Manb1-4GlcNAcb1-4(Fuca1-6)GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G86357DX",
                "Galb1-4GlcNAcb1-2Mana1-6(Galb1-4GlcNAcb1-4(Galb1-4GlcNAcb1-2)Mana1-3)Manb1-4GlcNAcb1-4(Fuca1-6)GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G45359RY",
                "Galb1-4GlcNAcb1-6(Galb1-4GlcNAcb1-2)Mana1-6(Galb1-4GlcNAcb1-2Mana1-3)Manb1-4GlcNAcb1-4(Fuca1-6)GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G63889NK",
                "Galb1-4GlcNAcb1-6(Galb1-4GlcNAcb1-2)Mana1-6(Galb1-4GlcNAcb1-4(Galb1-4GlcNAcb1-2)Mana1-3)Manb1-4GlcNAcb1-4(Fuca1-6)GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G77252PU",
                "Neu5Aca2-3Galb1-4GlcNAcb1-2Mana1-6(Neu5Aca2-3Galb1-4GlcNAcb1-2Mana1-3)Manb1-4GlcNAcb1-4GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G78030KJ",
                "Neu5Aca2-3Galb1-4GlcNAcb1-2Mana1-6(Neu5Aca2-3Galb1-4GlcNAcb1-4(Neu5Aca2-3Galb1-4GlcNAcb1-2)Mana1-3)Manb1-4GlcNAcb1-4GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G98366ZJ",
                "Neu5Aca2-3Galb1-4GlcNAcb1-6(Neu5Aca2-3Galb1-4GlcNAcb1-2)Mana1-6(Neu5Aca2-3Galb1-4GlcNAcb1-2Mana1-3)Manb1-4GlcNAcb1-4GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G56318NV",
                "Neu5Aca2-3Galb1-4GlcNAcb1-6(Neu5Aca2-3Galb1-4GlcNAcb1-2)Mana1-6(Neu5Aca2-3Galb1-4GlcNAcb1-4(Neu5Aca2-3Galb1-4GlcNAcb1-2)Mana1-3)Manb1-4GlcNAcb1-4GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G17689DH",
                "Neu5Aca2-3Galb1-4GlcNAcb1-2Mana1-6(Neu5Aca2-3Galb1-4GlcNAcb1-2Mana1-3)Manb1-4GlcNAcb1-4(Fuca1-6)GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G91413ZX",
                "Neu5Aca2-3Galb1-4GlcNAcb1-2Mana1-6(Neu5Aca2-3Galb1-4GlcNAcb1-4(Neu5Aca2-3Galb1-4GlcNAcb1-2)Mana1-3)Manb1-4GlcNAcb1-4(Fuca1-6)GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G45209NR",
                "Neu5Aca2-3Galb1-4GlcNAcb1-6(Neu5Aca2-3Galb1-4GlcNAcb1-2)Mana1-6(Neu5Aca2-3Galb1-4GlcNAcb1-2Mana1-3)Manb1-4GlcNAcb1-4(Fuca1-6)GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G94531EZ",
                "Neu5Aca2-3Galb1-4GlcNAcb1-6(Neu5Aca2-3Galb1-4GlcNAcb1-2)Mana1-6(Neu5Aca2-3Galb1-4GlcNAcb1-4(Neu5Aca2-3Galb1-4GlcNAcb1-2)Mana1-3)Manb1-4GlcNAcb1-4(Fuca1-6)GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G84467IZ",
                "Neu5Aca2-6Galb1-4GlcNAcb1-2Mana1-6(Neu5Aca2-6Galb1-4GlcNAcb1-2Mana1-3)Manb1-4GlcNAcb1-4GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G66665YI",
                "Neu5Aca2-6Galb1-4GlcNAcb1-2Mana1-6(Neu5Aca2-6Galb1-4GlcNAcb1-4(Neu5Aca2-6Galb1-4GlcNAcb1-2)Mana1-3)Manb1-4GlcNAcb1-4GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G25505UF",
                "Neu5Aca2-6Galb1-4GlcNAcb1-6(Neu5Aca2-6Galb1-4GlcNAcb1-2)Mana1-6(Neu5Aca2-6Galb1-4GlcNAcb1-2Mana1-3)Manb1-4GlcNAcb1-4GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G15998WM",
                "Neu5Aca2-6Galb1-4GlcNAcb1-6(Neu5Aca2-6Galb1-4GlcNAcb1-2)Mana1-6(Neu5Aca2-6Galb1-4GlcNAcb1-4(Neu5Aca2-6Galb1-4GlcNAcb1-2)Mana1-3)Manb1-4GlcNAcb1-4GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G56749GV",
                "Neu5Aca2-6Galb1-4GlcNAcb1-2Mana1-6(Neu5Aca2-6Galb1-4GlcNAcb1-2Mana1-3)Manb1-4GlcNAcb1-4(Fuca1-6)GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G19444JC",
                "Neu5Aca2-6Galb1-4GlcNAcb1-2Mana1-6(Neu5Aca2-6Galb1-4GlcNAcb1-4(Neu5Aca2-6Galb1-4GlcNAcb1-2)Mana1-3)Manb1-4GlcNAcb1-4(Fuca1-6)GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G39018CC",
                "Neu5Aca2-6Galb1-4GlcNAcb1-6(Neu5Aca2-6Galb1-4GlcNAcb1-2)Mana1-6(Neu5Aca2-6Galb1-4GlcNAcb1-2Mana1-3)Manb1-4GlcNAcb1-4(Fuca1-6)GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G99533GU",
                "Neu5Aca2-6Galb1-4GlcNAcb1-6(Neu5Aca2-6Galb1-4GlcNAcb1-2)Mana1-6(Neu5Aca2-6Galb1-4GlcNAcb1-4(Neu5Aca2-6Galb1-4GlcNAcb1-2)Mana1-3)Manb1-4GlcNAcb1-4(Fuca1-6)GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G22768VO",
                "Mana1-6(Mana1-3)Manb1-4GlcNAcb1-4GlcNAcb1-Asn",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G13974DV",
                "Mana1-6(Mana1-3)Mana1-6(Mana1-3)Manb1-4GlcNAcb1-4GlcNAc-AEAB",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G10179FS",
                "Galb1-4GlcNAcb1-2Mana1-6(Galb1-4GlcNAcb1-2Mana1-3)Manb1-4GlcNAcb1-4GlcNAc-AEAB",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G09675DY",
                "Neu5Aca2-6Galb1-4GlcNAcb1-2Mana1-6(Neu5Aca2-6Galb1-4GlcNAcb1-2Mana1-3)Manb1-4GlcNAcb1-4GlcNAc-AEAB",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G48154LM",
                "Neu5Aca2-6Galb1-4GlcNAcb1-3Galb1-4Glc-AEAB",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ],
            [
                "G87356FF",
                "Neu5Aca2-3Galb1-4GlcNAcb1-3Galb1-4Glc-AEAB",
                "Chemo-enzymatic synthesis",
                "30745240",
                "Richard Cummings Laboratory (NCFG BIDMC Harvard Medical School)"
            ]
        ]
    },
    "readme": "Name\n   - Glycan Evidence NCFG\n\nVersion\n   - 1.11.2\n\nCreated on\n  - 2021-10-15T07:01:02.756996\n\nModified on\n   - \n\nCreated by\n   -  [jeetvora@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Amanda Bell [amandab2140@gwu.edu], Jonathon Keeney [keeneyjg@gwu.edu], Millicent Quartey [mquartey@email.gwu.edu]\n\nAuthors\n   - \n\nChecksum\n   - \n\nUsability Domain\n   - -\n\nDescription Domain\n   Keywords\n   - Glycan\n   - GlyTouCan Accession\n   - Evidence\n   - NCFG\n\n   Pipeline Steps\n   - Step-1: \n\nExecution Domain\n   Scripts   - https://github.com/GW-HIVE/glygen-backend-integration/blob/master/pipeline/integrator/make-species-agnostic-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: glycan_masterlist.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-1.12.3/reviewed/glycan_masterlist.csv\n      Name: glycan_evidence_ncfg.csv\n      URI: https:/data.glygen.org/ln2downloads/ncfg/09_01_2020/glycan_evidence_ncfg.csv\n   Output Subdomain\n      Name: glycan_evidence_ncfg.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-1.12.3/reviewed/glycan_evidence_ncfg.csv\n      Name: glycan_evidence_ncfg.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-1.12.3/reviewed/glycan_evidence_ncfg.stat.csv\n\nFields\n      Name: \"glytoucan_ac\"\n     Description: \"Unique accession assigned to the registered glycan structure in GlyTouCan database\"\n      Unique Values: \"38\"\n      Name: \"sequence\"\n     Description: \"Sequence\"\n      Unique Values: \"38\"\n      Name: \"tag\"\n     Description: \"\"\n      Unique Values: \"1\"\n      Name: \"evidence\"\n     Description: \"NCBI PubMed Id (PMID) or DOI (Digital Object Identifier) as evidence for the entry/annotation\"\n      Unique Values: \"1\"\n      Name: \"source\"\n     Description: \"Source for the data\"\n      Unique Values: \"1\"",
    "downloadurl": "/ln2data/releases/data/v-1.12.3/reviewed/glycan_evidence_ncfg.csv"
}