{ "bcoid": "GLY_000569", "title": "Rat Proteoform Phosphorylation Citations (iPTMnet)", "description": "", "filename": "rat_proteoform_citations_phosphorylation_iptmnet.csv", "filetype": "csv", "categories": { "species": "Rattus norvegicus", "molecule": "Proteoform", "tags": "Phosphorylation Citations (iPTMnet)", "file_type": "csv", "status": "Reviewed", "scope": "internal" }, "minitable": { "content": [ [ "O08838-1...", "The in vivo ..." ], [ "O08874-1...", "Rho GTPase c..." ] ], "headers": [ "uniprotkb_ca...", "title..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "uniprotkb_canonical_ac" }, { "type": "string", "label": "title" }, { "type": "string", "label": "journal_name" }, { "type": "string", "label": "publication_date" }, { "type": "string", "label": "authors" }, { "type": "string", "label": "xref_key" }, { "type": "string", "label": "xref_id" }, { "type": "string", "label": "src_xref_key" }, { "type": "string", "label": "src_xref_id" } ], [ "O08838-1", "The in vivo phosphorylation sites in multiple isoforms of amphiphysin I from rat brain nerve terminals.", "Molecular & cellular proteomics : MCP", "2008 Jun", "Craft GE, Graham ME, Bache N, Larsen MR, Robinson PJ", "protein_xref_pubmed", "18344231", "protein_xref_iptmnet", "O08838" ], [ "O08874-1", "Rho GTPase control of protein kinase C-related protein kinase activation by 3-phosphoinositide-dependent protein kinase.", "The Journal of biological chemistry", "2000 Apr 14", "Flynn P, Mellor H, Casamassima A, Parker PJ", "protein_xref_pubmed", "10753910", "protein_xref_iptmnet", "O08874" ], [ "O35147-1", "Cdc2 phosphorylation of BAD links the cell cycle to the cell death machinery.", "Molecular cell", "2002 May", "Konishi Y, Lehtinen M, Donovan N, Bonni A", "protein_xref_pubmed", "12049737", "protein_xref_iptmnet", "O35147" ], [ "O35254-1", "Phosphoproteomic analysis of rat liver by high capacity IMAC and LC-MS/MS.", "Journal of proteome research", "2006 Jan", "Moser K, White FM", "protein_xref_pubmed", "16396499", "protein_xref_iptmnet", "O35254" ], [ "O35274-1", "Spinophilin is phosphorylated by Ca2+/calmodulin-dependent protein kinase II resulting in regulation of its binding to F-actin.", "Journal of neurochemistry", "2004 Jul", "Grossman SD, Futter M, Snyder GL, Allen PB, Nairn AC, Greengard P, Hsieh-Wilson LC", "protein_xref_pubmed", "15228588", "protein_xref_iptmnet", "O35274" ], [ "O35303-1", "Mitotic phosphorylation of dynamin-related GTPase Drp1 participates in mitochondrial fission.", "The Journal of biological chemistry", "2007 Apr 13", "Taguchi N, Ishihara N, Jofuku A, Oka T, Mihara K", "protein_xref_pubmed", "17301055", "protein_xref_iptmnet", "O35303" ], [ "O35303-1", "Reversible phosphorylation of Drp1 by cyclic AMP-dependent protein kinase and calcineurin regulates mitochondrial fission and cell death.", "EMBO reports", "2007 Oct", "Cribbs JT, Strack S", "protein_xref_pubmed", "17721437", "protein_xref_iptmnet", "O35303" ], [ "O35787-1", "Phosphoproteomic analysis of rat liver by high capacity IMAC and LC-MS/MS.", "Journal of proteome research", "2006 Jan", "Moser K, White FM", "protein_xref_pubmed", "16396499", "protein_xref_iptmnet", "O35787" ], [ "O35889-1", "Comprehensive identification of phosphorylation sites in postsynaptic density preparations.", "Molecular & cellular proteomics : MCP", "2006 May", "Trinidad JC, Specht CG, Thalhammer A, Schoepfer R, Burlingame AL", "protein_xref_pubmed", "16452087", "protein_xref_iptmnet", "O35889" ], [ "O35889-1", "Phosphoproteomic analysis of rat liver by high capacity IMAC and LC-MS/MS.", "Journal of proteome research", "2006 Jan", "Moser K, White FM", "protein_xref_pubmed", "16396499", "protein_xref_iptmnet", "O35889" ], [ "O35987-1", "Phosphoproteomic analysis of rat liver by high capacity IMAC and LC-MS/MS.", "Journal of proteome research", "2006 Jan", "Moser K, White FM", "protein_xref_pubmed", "16396499", "protein_xref_iptmnet", "O35987" ], [ "O54898-1", "Comprehensive identification of phosphorylation sites in postsynaptic density preparations.", "Molecular & cellular proteomics : MCP", "2006 May", "Trinidad JC, Specht CG, Thalhammer A, Schoepfer R, Burlingame AL", "protein_xref_pubmed", "16452087", "protein_xref_iptmnet", "O54898" ], [ "O70199-1", "Phosphoproteomic analysis of rat liver by high capacity IMAC and LC-MS/MS.", "Journal of proteome research", "2006 Jan", "Moser K, White FM", "protein_xref_pubmed", "16396499", "protein_xref_iptmnet", "O70199" ], [ "O88453-1", "Phosphoproteomic analysis of rat liver by high capacity IMAC and LC-MS/MS.", "Journal of proteome research", "2006 Jan", "Moser K, White FM", "protein_xref_pubmed", "16396499", "protein_xref_iptmnet", "O88453" ], [ "O88498-1", "Nerve growth factor (NGF) down-regulates the Bcl-2 homology 3 (BH3) domain-only protein Bim and suppresses its proapoptotic activity by phosphorylation.", "The Journal of biological chemistry", "2002 Dec 20", "Biswas SC, Greene LA", "protein_xref_pubmed", "12388545", "protein_xref_iptmnet", "O88498" ], [ "O88658-1", "Phosphoproteomic analysis of rat liver by high capacity IMAC and LC-MS/MS.", "Journal of proteome research", "2006 Jan", "Moser K, White FM", "protein_xref_pubmed", "16396499", "protein_xref_iptmnet", "O88658" ], [ "O88871-1", "Comprehensive identification of phosphorylation sites in postsynaptic density preparations.", "Molecular & cellular proteomics : MCP", "2006 May", "Trinidad JC, Specht CG, Thalhammer A, Schoepfer R, Burlingame AL", "protein_xref_pubmed", "16452087", "protein_xref_iptmnet", "O88871" ], [ "P00176-1", "Phosphorylation of hepatic phenobarbital-inducible cytochrome P-450.", "The EMBO journal", "1989 Oct", "Pyerin W, Taniguchi H", "protein_xref_pubmed", "2583091", "protein_xref_iptmnet", "P00176" ], [ "P01237-1", "p21-activated protein kinase gamma-PAK in pituitary secretory granules phosphorylates prolactin.", "FEBS letters", "2002 Mar 27", "Tuazon PT, Lorenson MY, Walker AM, Traugh JA", "protein_xref_pubmed", "11943200", "protein_xref_iptmnet", "P01237" ], [ "P02401-1", "Phosphoproteomic analysis of rat liver by high capacity IMAC and LC-MS/MS.", "Journal of proteome research", "2006 Jan", "Moser K, White FM", "protein_xref_pubmed", "16396499", "protein_xref_iptmnet", "P02401" ], [ "P02688-1", "Comprehensive identification of phosphorylation sites in postsynaptic density preparations.", "Molecular & cellular proteomics : MCP", "2006 May", "Trinidad JC, Specht CG, Thalhammer A, Schoepfer R, Burlingame AL", "protein_xref_pubmed", "16452087", "protein_xref_iptmnet", "P02688" ], [ "P02692-1", "Phosphoproteomic analysis of rat liver by high capacity IMAC and LC-MS/MS.", "Journal of proteome research", "2006 Jan", "Moser K, White FM", "protein_xref_pubmed", "16396499", "protein_xref_iptmnet", "P02692" ], [ "P04167-1", "Phosphorylation of hepatic phenobarbital-inducible cytochrome P-450.", "The EMBO journal", "1989 Oct", "Pyerin W, Taniguchi H", "protein_xref_pubmed", "2583091", "protein_xref_iptmnet", "P04167" ], [ "P04176-1", "Amino acid sequence at the phosphorylated site of rat liver phenylalanine hydroxylase and phosphorylation of a corresponding synthetic peptide.", "Biochemical and biophysical research communications", "1980 Mar 28", "Wretborn M, Humble E, Ragnarsson U, Engstrom L", "protein_xref_pubmed", "7387651", "protein_xref_iptmnet", "P04176" ], [ "P04177-1", "Identification of four phosphorylation sites in the N-terminal region of tyrosine hydroxylase.", "The Journal of biological chemistry", "1986 Aug 15", "Campbell DG, Hardie DG, Vulliet PR", "protein_xref_pubmed", "2874140", "protein_xref_iptmnet", "P04177" ], [ "P04177-1", "Tyrosine hydroxylase in rat brain dopaminergic nerve terminals. Multiple-site phosphorylation in vivo and in synaptosomes.", "The Journal of biological chemistry", "1991 Mar 25", "Haycock JW, Haycock DA", "protein_xref_pubmed", "1672315", "protein_xref_iptmnet", "P04177" ], [ "P04177-1", "Identification of a novel proline-directed serine/threonine protein kinase in rat pheochromocytoma.", "The Journal of biological chemistry", "1989 Sep 25", "Vulliet PR, Hall FL, Mitchell JP, Hardie DG", "protein_xref_pubmed", "2570779", "protein_xref_iptmnet", "P04177" ], [ "P04256-1", "Phosphoproteomic analysis of rat liver by high capacity IMAC and LC-MS/MS.", "Journal of proteome research", "2006 Jan", "Moser K, White FM", "protein_xref_pubmed", "16396499", "protein_xref_iptmnet", "P04256" ], [ "P04775-1", "Convergent regulation of sodium channels by protein kinase C and cAMP-dependent protein kinase.", "Science (New York, N.Y.)", "1993 Sep 10", "Li M, West JW, Numann R, Murphy BJ, Scheuer T, Catterall WA", "protein_xref_pubmed", "8396273", "protein_xref_iptmnet", "P04775" ], [ "P04775-1", "Identification of the sites of selective phosphorylation and dephosphorylation of the rat brain Na+ channel alpha subunit by cAMP-dependent protein kinase and phosphoprotein phosphatases.", "The Journal of biological chemistry", "1993 Dec 25", "Murphy BJ, Rossie S, De Jongh KS, Catterall WA", "protein_xref_pubmed", "8262976", "protein_xref_iptmnet", "P04775" ], [ "P05197-1", "Phosphoproteomic analysis of rat liver by high capacity IMAC and LC-MS/MS.", "Journal of proteome research", "2006 Jan", "Moser K, White FM", "protein_xref_pubmed", "16396499", "protein_xref_iptmnet", "P05197" ], [ "P06685-1", "Structural basis for species-specific differences in the phosphorylation of Na,K-ATPase by protein kinase C.", "The Journal of biological chemistry", "1995 Jun 9", "Feschenko MS, Sweadner KJ", "protein_xref_pubmed", "7775468", "protein_xref_iptmnet", "P06685" ], [ "P06685-1", "Insulin-induced stimulation of Na+,K(+)-ATPase activity in kidney proximal tubule cells depends on phosphorylation of the alpha-subunit at Tyr-10.", "Molecular biology of the cell", "1999 Sep", "Feraille E, Carranza ML, Gonin S, Beguin P, Pedemonte C, Rousselot M, Caverzasio J, Geering K, Martin PY, Favre H", "protein_xref_pubmed", "10473631", "protein_xref_iptmnet", "P06685" ], [ "P06766-1", "Inactivation of DNA polymerase beta by in vitro phosphorylation with protein kinase C.", "The Journal of biological chemistry", "1991 Jun 15", "Tokui T, Inagaki M, Nishizawa K, Yatani R, Kusagawa M, Ajiro K, Nishimoto Y, Date T, Matsukage A", "protein_xref_pubmed", "2040602", "protein_xref_iptmnet", "P06766" ], [ "P07150-1", "Correlation of gene and protein structure of rat and human lipocortin I.", "Biochemistry", "1991 Sep 17", "Kovacic RT, Tizard R, Cate RL, Frey AZ, Wallner BP", "protein_xref_pubmed", "1832554", "protein_xref_iptmnet", "P07150" ], [ "P07483-1", "Fatty acid-binding protein from rat heart is phosphorylated on Tyr19 in response to insulin stimulation.", "Journal of lipid research", "1993 Aug", "Nielsen SU, Spener F", "protein_xref_pubmed", "7691977", "protein_xref_iptmnet", "P07483" ], [ "P07722-1", "Identification of tyrosine 620 as the major phosphorylation site of myelin-associated glycoprotein and its implication in interacting with signaling molecules.", "The Journal of biological chemistry", "1994 Nov 4", "Jaramillo ML, Afar DE, Almazan G, Bell JC", "protein_xref_pubmed", "7525550", "protein_xref_iptmnet", "P07722" ], [ "P07727-1", "Phosphorylation of the 48-kDa subunit of the glycine receptor by protein kinase C.", "The Journal of biological chemistry", "1991 Jan 5", "Ruiz-Gomez A, Vaello ML, Valdivieso F, Mayor F Jr", "protein_xref_pubmed", "1845981", "protein_xref_iptmnet", "P07727" ], [ "P07936-1", "Mutation of serine 41 in the neuron-specific protein B-50 (GAP-43) prohibits phosphorylation by protein kinase C.", "Journal of neurochemistry", "1990 Oct", "Nielander HB, Schrama LH, van Rozen AJ, Kasperaitis M, Oestreicher AB, Gispen WH, Schotman P", "protein_xref_pubmed", "2144585", "protein_xref_iptmnet", "P07936" ], [ "P07936-1", "GAP-43, a protein associated with axon growth, is phosphorylated at three sites in cultured neurons and rat brain.", "The Journal of biological chemistry", "1992 May 5", "Spencer SA, Schuh SM, Liu WS, Willard MB", "protein_xref_pubmed", "1533624", "protein_xref_iptmnet", "P07936" ], [ "P07953-1", "Amino acid sequence of the phosphorylation site of rat liver 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase.", "The Journal of biological chemistry", "1984 Jun 25", "Murray KJ, El-Maghrabi MR, Kountz PD, Lukas TJ, Soderling TR, Pilkis SJ", "protein_xref_pubmed", "6330071", "protein_xref_iptmnet", "P07953" ], [ "P08033-1", "Phosphorylation of connexin 32, a hepatocyte gap-junction protein, by cAMP-dependent protein kinase, protein kinase C and Ca2+/calmodulin-dependent protein kinase II.", "European journal of biochemistry", "1990 Sep 11", "Saez JC, Nairn AC, Czernik AJ, Spray DC, Hertzberg EL, Greengard P, Bennett MV", "protein_xref_pubmed", "2170122", "protein_xref_iptmnet", "P08033" ], [ "P08050-1", "Regulation of epidermal growth factor-induced connexin 43 gap junction communication by big mitogen-activated protein kinase1/ERK5 but not ERK1/2 kinase activation.", "The Journal of biological chemistry", "2003 May 16", "Cameron SJ, Malik S, Akaike M, Lerner-Marmarosh N, Yan C, Lee JD, Abe J, Yang J", "protein_xref_pubmed", "12637502", "protein_xref_iptmnet", "P08050" ], [ "P08050-1", "Characterization of the mitogen-activated protein kinase phosphorylation sites on the connexin-43 gap junction protein.", "The Journal of biological chemistry", "1996 Feb 16", "Warn-Cramer BJ, Lampe PD, Kurata WE, Kanemitsu MY, Loo LW, Eckhart W, Lau AF", "protein_xref_pubmed", "8631994", "protein_xref_iptmnet", "P08050" ], [ "P08050-1", "Regulation of connexin-43 gap junctional intercellular communication by mitogen-activated protein kinase.", "The Journal of biological chemistry", "1998 Apr 10", "Warn-Cramer BJ, Cottrell GT, Burt JM, Lau AF", "protein_xref_pubmed", "9535909", "protein_xref_iptmnet", "P08050" ], [ "P08050-1", "Doxorubicin induces EGF receptor-dependent downregulation of gap junctional intercellular communication in rat liver epithelial cells.", "Biological chemistry", "2005 Mar", "Abdelmohsen K, von Montfort C, Stuhlmann D, Gerber PA, Decking UK, Sies H, Klotz LO", "protein_xref_pubmed", "15843167", "protein_xref_iptmnet", "P08050" ], [ "P08050-1", "Casein kinase 1 regulates connexin-43 gap junction assembly.", "The Journal of biological chemistry", "2002 Nov 22", "Cooper CD, Lampe PD", "protein_xref_pubmed", "12270943", "protein_xref_iptmnet", "P08050" ], [ "P08050-1", "Phosphorylation of connexin43 on serine368 by protein kinase C regulates gap junctional communication.", "The Journal of cell biology", "2000 Jun 26", "Lampe PD, TenBroek EM, Burt JM, Kurata WE, Johnson RG, Lau AF", "protein_xref_pubmed", "10871288", "protein_xref_iptmnet", "P08050" ], [ "P08050-1", "v-Src phosphorylation of connexin 43 on Tyr247 and Tyr265 disrupts gap junctional communication.", "The Journal of cell biology", "2001 Aug 20", "Lin R, Warn-Cramer BJ, Kurata WE, Lau AF", "protein_xref_pubmed", "11514593", "protein_xref_iptmnet", "P08050" ], [ "P08413-1", "Protein kinase phosphorylation site sequences and consensus specificity motifs: tabulations.", "Methods in enzymology", "1991", "Pearson RB, Kemp BE", "protein_xref_pubmed", "1956339", "protein_xref_iptmnet", "P08413" ], [ "P08494-1", "Conserved phosphorylation of serines in the Ser-X-Glu/Ser(P) sequences of the vitamin K-dependent matrix Gla protein from shark, lamb, rat, cow, and human.", "Protein science : a publication of the Protein Society", "1994 May", "Price PA, Rice JS, Williamson MK", "protein_xref_pubmed", "8061611", "protein_xref_iptmnet", "P08494" ], [ "P09215-1", "Modulation of PKCdelta tyrosine phosphorylation and activity in salivary and PC-12 cells by Src kinases.", "American journal of physiology. Cell physiology", "2001 Jun", "Benes C, Soltoff SP", "protein_xref_pubmed", "11350745", "protein_xref_iptmnet", "P09215" ], [ "P09215-1", "Phosphorylation sites of protein kinase C delta in H2O2-treated cells and its activation by tyrosine kinase in vitro.", "Proceedings of the National Academy of Sciences of the United States of America", "2001 Jun 5", "Konishi H, Yamauchi E, Taniguchi H, Yamamoto T, Matsuzaki H, Takemura Y, Ohmae K, Kikkawa U, Nishizuka Y", "protein_xref_pubmed", "11381116", "protein_xref_iptmnet", "P09215" ], [ "P09215-1", "Phosphoproteomic analysis of rat liver by high capacity IMAC and LC-MS/MS.", "Journal of proteome research", "2006 Jan", "Moser K, White FM", "protein_xref_pubmed", "16396499", "protein_xref_iptmnet", "P09215" ], [ "P09215-1", "Protein kinase C isotypes controlled by phosphoinositide 3-kinase through the protein kinase PDK1.", "Science (New York, N.Y.)", "1998 Sep 25", "Le Good JA, Ziegler WH, Parekh DB, Alessi DR, Cohen P, Parker PJ", "protein_xref_pubmed", "9748166", "protein_xref_iptmnet", "P09215" ], [ "P09215-1", "Ceramide-induced apoptosis by translocation, phosphorylation, and activation of protein kinase Cdelta in the Golgi complex.", "The Journal of biological chemistry", "2004 Mar 26", "Kajimoto T, Shirai Y, Sakai N, Yamamoto T, Matsuzaki H, Kikkawa U, Saito N", "protein_xref_pubmed", "14715667", "protein_xref_iptmnet", "P09215" ], [ "P09215-1", "Activation and translocation of PKCdelta is necessary for VEGF-induced ERK activation through KDR in HEK293T cells.", "Biochemical and biophysical research communications", "2004 Dec 17", "Kuriyama M, Taniguchi T, Shirai Y, Sasaki A, Yoshimura A, Saito N", "protein_xref_pubmed", "15541367", "protein_xref_iptmnet", "P09215" ], [ "P09215-1", "Stimulus-specific differences in protein kinase C delta localization and activation mechanisms in cardiomyocytes.", "The Journal of biological chemistry", "2004 Apr 30", "Rybin VO, Guo J, Sabri A, Elouardighi H, Schaefer E, Steinberg SF", "protein_xref_pubmed", "14970215", "protein_xref_iptmnet", "P09215" ], [ "P09215-1", "Tyrosine phosphorylation regulates the proteolytic activation of protein kinase Cdelta in dopaminergic neuronal cells.", "The Journal of biological chemistry", "2005 Aug 5", "Kaul S, Anantharam V, Yang Y, Choi CJ, Kanthasamy A, Kanthasamy AG", "protein_xref_pubmed", "15961393", "protein_xref_iptmnet", "P09215" ], [ "P09215-1", "Activation of protein kinase C by tyrosine phosphorylation in response to H2O2.", "Proceedings of the National Academy of Sciences of the United States of America", "1997 Oct 14", "Konishi H, Tanaka M, Takemura Y, Matsuzaki H, Ono Y, Kikkawa U, Nishizuka Y", "protein_xref_pubmed", "9326592", "protein_xref_iptmnet", "P09215" ], [ "P09810-1", "Phosphorylation and activation of brain tryptophan hydroxylase: identification of serine-58 as a substrate site for protein kinase A.", "Journal of neurochemistry", "1997 May", "Kuhn DM, Arthur R Jr, States JC", "protein_xref_pubmed", "9109552", "protein_xref_iptmnet", "P09810" ], [ "P09951-1", "Amino acid sequences surrounding the cAMP-dependent and calcium/calmodulin-dependent phosphorylation sites in rat and bovine synapsin I.", "Proceedings of the National Academy of Sciences of the United States of America", "1987 Nov", "Czernik AJ, Pang DT, Greengard P", "protein_xref_pubmed", "3118371", "protein_xref_iptmnet", "P09951" ], [ "P0C1X8-1", "The in vivo phosphorylation sites in multiple isoforms of amphiphysin I from rat brain nerve terminals.", "Molecular & cellular proteomics : MCP", "2008 Jun", "Craft GE, Graham ME, Bache N, Larsen MR, Robinson PJ", "protein_xref_pubmed", "18344231", "protein_xref_iptmnet", "P0C1X8" ], [ "P10361-1", "p53 phosphorylation mutants retain transcription activity.", "Oncogene", "1995 Feb 16", "Fuchs B, O'Connor D, Fallis L, Scheidtmann KH, Lu X", "protein_xref_pubmed", "7862459", "protein_xref_iptmnet", "P10361" ], [ "P11275-1", "Ca2+/calmodulin-dependent protein kinase II: identification of threonine-286 as the autophosphorylation site in the alpha subunit associated with the generation of Ca2+-independent activity.", "Proceedings of the National Academy of Sciences of the United States of America", "1988 Sep", "Thiel G, Czernik AJ, Gorelick F, Nairn AC, Greengard P", "protein_xref_pubmed", "2842767", "protein_xref_iptmnet", "P11275" ], [ "P11275-1", "Comprehensive identification of phosphorylation sites in postsynaptic density preparations.", "Molecular & cellular proteomics : MCP", "2006 May", "Trinidad JC, Specht CG, Thalhammer A, Schoepfer R, Burlingame AL", "protein_xref_pubmed", "16452087", "protein_xref_iptmnet", "P11275" ], [ "P11345-1", "Phosphoproteomic analysis of rat liver by high capacity IMAC and LC-MS/MS.", "Journal of proteome research", "2006 Jan", "Moser K, White FM", "protein_xref_pubmed", "16396499", "protein_xref_iptmnet", "P11345" ], [ "P11497-1", "Location and function of three sites phosphorylated on rat acetyl-CoA carboxylase by the AMP-activated protein kinase.", "European journal of biochemistry", "1990 Jan 12", "Davies SP, Sim AT, Hardie DG", "protein_xref_pubmed", "1967580", "protein_xref_iptmnet", "P11497" ], [ "P11497-1", "Identification by amino acid sequencing of three major regulatory phosphorylation sites on rat acetyl-CoA carboxylase.", "European journal of biochemistry", "1988 Aug 1", "Munday MR, Campbell DG, Carling D, Hardie DG", "protein_xref_pubmed", "2900138", "protein_xref_iptmnet", "P11497" ], [ "P11497-1", "Critical phosphorylation sites for acetyl-CoA carboxylase activity.", "The Journal of biological chemistry", "1994 Sep 2", "Ha J, Daniel S, Broyles SS, Kim KH", "protein_xref_pubmed", "7915280", "protein_xref_iptmnet", "P11497" ], [ "P11497-1", "G protein--coupled receptor kinases.", "Journal of neurochemistry", "1994 Aug", "Haga T, Haga K, Kameyama K", "protein_xref_pubmed", "8035170", "protein_xref_iptmnet", "P11497" ], [ "P11497-1", "Protein kinase phosphorylation site sequences and consensus specificity motifs: tabulations.", "Methods in enzymology", "1991", "Pearson RB, Kemp BE", "protein_xref_pubmed", "1956339", "protein_xref_iptmnet", "P11497" ], [ "P11497-1", "Phosphoproteomic analysis of rat liver by high capacity IMAC and LC-MS/MS.", "Journal of proteome research", "2006 Jan", "Moser K, White FM", "protein_xref_pubmed", "16396499", "protein_xref_iptmnet", "P11497" ], [ "P11598-1", "Isolation from spleen of a 57-kDa protein substrate of the tyrosine kinase Lyn. Identification as a protein related to protein disulfide-isomerase and localisation of the phosphorylation sites.", "European journal of biochemistry", "1996 Jan 15", "Donella-Deana A, James P, Staudenmann W, Cesaro L, Marin O, Brunati AM, Ruzzene M, Pinna LA", "protein_xref_pubmed", "8631326", "protein_xref_iptmnet", "P11598" ], [ "P11730-1", "Comprehensive identification of phosphorylation sites in postsynaptic density preparations.", "Molecular & cellular proteomics : MCP", "2006 May", "Trinidad JC, Specht CG, Thalhammer A, Schoepfer R, Burlingame AL", "protein_xref_pubmed", "16452087", "protein_xref_iptmnet", "P11730" ], [ "P11960-1", "Phosphoproteomic analysis of rat liver by high capacity IMAC and LC-MS/MS.", "Journal of proteome research", "2006 Jan", "Moser K, White FM", "protein_xref_pubmed", "16396499", "protein_xref_iptmnet", "P11960" ], [ "P11960-1", "Phosphorylation sites and inactivation of branched-chain alpha-ketoacid dehydrogenase isolated from rat heart, bovine kidney, and rabbit liver, kidney, heart, brain, and skeletal muscle.", "Archives of biochemistry and biophysics", "1986 Jan", "Paxton R, Kuntz M, Harris RA", "protein_xref_pubmed", "3947057", "protein_xref_iptmnet", "P11960" ], [ "P12839-1", "Identification of six phosphorylation sites in the COOH-terminal tail region of the rat neurofilament protein M.", "The Journal of biological chemistry", "1992 Mar 5", "Xu ZS, Liu WS, Willard MB", "protein_xref_pubmed", "1537832", "protein_xref_iptmnet", "P12839" ], [ "P12928-1", "Amino acid sequence at the phosphorylated site of rat liver pyruvate kinase.", "Biochemical and biophysical research communications", "1975 Dec 15", "Edlund B, Andersson J, Titanji V, Dahlqvist U, Ekman P, Zetterqvist O, Engstoom L", "protein_xref_pubmed", "1106423", "protein_xref_iptmnet", "P12928" ], [ "P13234-1", "Inactivation of calmodulin-dependent protein kinase IV by autophosphorylation of serine 332 within the putative calmodulin-binding domain.", "The Journal of biological chemistry", "1996 Mar 22", "Watanabe S, Okuno S, Kitani T, Fujisawa H", "protein_xref_pubmed", "8636117", "protein_xref_iptmnet", "P13234" ], [ "P13234-1", "Autophosphorylation of calmodulin-dependent protein kinase IV from rat cerebral cortex.", "Journal of biochemistry", "1993 May", "Kameshita I, Fujisawa H", "protein_xref_pubmed", "8340352", "protein_xref_iptmnet", "P13234" ], [ "P13234-1", "Mechanism of the generation of autonomous activity of Ca2+/calmodulin-dependent protein kinase IV.", "The Journal of biological chemistry", "2004 Sep 24", "Tokumitsu H, Hatano N, Inuzuka H, Yokokura S, Nozaki N, Kobayashi R", "protein_xref_pubmed", "15262966", "protein_xref_iptmnet", "P13234" ], [ "P13234-1", "Phosphorylation and activation of Ca(2+)-calmodulin-dependent protein kinase IV by Ca(2+)-calmodulin-dependent protein kinase Ia kinase. Phosphorylation of threonine 196 is essential for activation.", "The Journal of biological chemistry", "1995 Jul 21", "Selbert MA, Anderson KA, Huang QH, Goldstein EG, Means AR, Edelman AM", "protein_xref_pubmed", "7615569", "protein_xref_iptmnet", "P13234" ], [ "P13234-1", "Studies on the site of phosphorylation of Ca2+/calmodulin-dependent protein kinase (CaM-kinase) IV by CaM-kinase kinase.", "Journal of biochemistry", "1997 Apr", "Kitani T, Okuno S, Fujisawa H", "protein_xref_pubmed", "9163534", "protein_xref_iptmnet", "P13234" ] ] }, "readme": "Name\n - Rat Proteoform Phosphorylation Citations (iPTMnet)\n\nVersion\n - 1.11.2\n\nCreated on\n - 2021-06-03T17:35:01.843447\n\nModified on\n - 2021-10-15T16:21:06.328619\n\nCreated by\n - [jeetvora@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Amanda Bell [amandab2140@gwu.edu], Jonathon Keeney [keeneyjg@gwu.edu], Millicent Quartey [mquartey@email.gwu.edu]\n\nAuthors\n - \n\nChecksum\n - \n\nExecution Domain\n Scripts\n\n Software Prerequisites\n\nI/O Domain\n Input Subdomain\n Name: rat_proteoform_phosphorylation_sites_iptmnet.csv\n URI: https:/data.glygen.org/ln2releases/data/v-1.12.3/reviewed/rat_proteoform_phosphorylation_sites_iptmnet.csv\n Output Subdomain\n Name: rat_proteoform_citations_phosphorylation_iptmnet.csv\n URI: https:/data.glygen.org/ln2releases/data/v-1.12.3/reviewed/rat_proteoform_citations_phosphorylation_iptmnet.csv\n Name: rat_proteoform_citations_phosphorylation_iptmnet.stat.csv\n URI: https:/data.glygen.org/ln2releases/data/v-1.12.3/reviewed/rat_proteoform_citations_phosphorylation_iptmnet.stat.csv\n\nFields\n Name: \"uniprotkb_canonical_ac\"\n Description: \"\"\n Unique Values: \"2241\"\n Name: \"title\"\n Description: \"Title of the published article in the journal\"\n Unique Values: \"1884\"\n Name: \"journal_name\"\n Description: \"The name of the journal in which the article is published\"\n Unique Values: \"424\"\n Name: \"publication_date\"\n Description: \"Contains the full date on which the issue of the journal was published. Sourced from MEDLINE/PubMed data element(fields) description.\"\n Unique Values: \"1124\"\n Name: \"authors\"\n Description: \"NA\"\n Unique Values: \"1868\"\n Name: \"xref_key\"\n Description: \"Source key associated to the xref_id\"\n Unique Values: \"1\"\n Name: \"xref_id\"\n Description: \"ID of the X-ref\"\n Unique Values: \"1884\"\n Name: \"src_xref_key\"\n Description: \"Source Xref key\"\n Unique Values: \"1\"\n Name: \"src_xref_id\"\n Description: \"Source X-ref ID\"\n Unique Values: \"2249\"", "downloadurl": "/ln2data/releases/data/v-1.12.3/reviewed/rat_proteoform_citations_phosphorylation_iptmnet.csv" }