{
    "bcoid": "GLY_000280",
    "title": "Rat Glycohydrolases",
    "description": "The Rat Glycohydrolases dataset contains a list of rat [taxid:9606] glycohydrolases derived from UniProtKB ...",
    "filename": "rat_protein_glycohydrolase.csv",
    "filetype": "csv",
    "categories": {
        "species": "Rattus norvegicus",
        "molecule": "Protein",
        "tags": "Glycohydrolases",
        "file_type": "csv",
        "status": "Reviewed",
        "scope": "internal"
    },
    "minitable": {
        "content": [
            [
                "P06760-1...",
                "Rattus norve..."
            ],
            [
                "P00689-1...",
                "Rattus norve..."
            ]
        ],
        "headers": [
            "uniprotkb_ca...",
            "species..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "uniprotkb_canonical_ac"
                },
                {
                    "type": "string",
                    "label": "species"
                },
                {
                    "type": "string",
                    "label": "status"
                },
                {
                    "type": "string",
                    "label": "gene_symbol"
                },
                {
                    "type": "string",
                    "label": "uniprotkb_protein_name"
                },
                {
                    "type": "string",
                    "label": "ec_number"
                },
                {
                    "type": "string",
                    "label": "brenda_ec_number"
                },
                {
                    "type": "string",
                    "label": "cazy_gh_gamily"
                },
                {
                    "type": "string",
                    "label": "interpro_id"
                },
                {
                    "type": "string",
                    "label": "pfam_ac"
                },
                {
                    "type": "string",
                    "label": "go_molecular_function"
                }
            ],
            [
                "P06760-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Gusb",
                "Beta-glucuronidase (EC 3.2.1.31)",
                "3.2.1.31",
                "",
                "GH2",
                "IPR036156|IPR008979|IPR006101|IPR023232|IPR006103|IPR023230|IPR006102|IPR006104|IPR017853|IPR013783",
                "PF00703|PF02836|PF02837",
                "beta-glucuronidase activity [GO:0004566]|carbohydrate binding [GO:0030246]|signaling receptor binding [GO:0005102]"
            ],
            [
                "P00689-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Amy2",
                "Pancreatic alpha-amylase (PA) (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)",
                "3.2.1.1",
                "",
                "GH13",
                "IPR006048|IPR031319|IPR006046|IPR006047|IPR013780|IPR017853",
                "PF00128|PF02806",
                "alpha-amylase activity [GO:0004556]|alpha-amylase activity (releasing maltohexaose) [GO:0103025]|calcium ion binding [GO:0005509]|chloride ion binding [GO:0031404]"
            ],
            [
                "Q6RY07-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Chia",
                "Acidic mammalian chitinase (AMCase) (EC 3.2.1.14)",
                "3.2.1.14",
                "",
                "GH18",
                "IPR002557|IPR036508|IPR011583|IPR029070|IPR001223|IPR001579|IPR017853",
                "PF01607|PF00704",
                "chitinase activity [GO:0004568]|chitin binding [GO:0008061]"
            ],
            [
                "Q6AYS4-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Fuca2",
                "Plasma alpha-L-fucosidase (EC 3.2.1.51) (Alpha-L-fucoside fucohydrolase 2) (Alpha-L-fucosidase 2)",
                "3.2.1.51",
                "3.2.1.51",
                "GH29",
                "IPR016286|IPR031919|IPR000933|IPR018526|IPR013780|IPR017853",
                "PF01120|PF16757",
                "alpha-L-fucosidase activity [GO:0004560]"
            ],
            [
                "P17164-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Fuca1",
                "Tissue alpha-L-fucosidase (EC 3.2.1.51) (Alpha-L-fucosidase I) (Alpha-L-fucoside fucohydrolase 1) (Alpha-L-fucosidase 1)",
                "3.2.1.51",
                "3.2.1.51",
                "GH29",
                "IPR016286|IPR028755|IPR031919|IPR000933|IPR018526|IPR013780|IPR017853",
                "PF01120|PF16757",
                "alpha-L-fucosidase activity [GO:0004560]|carbohydrate binding [GO:0030246]|fucosidase activity [GO:0015928]"
            ],
            [
                "Q02401-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Lct",
                "Lactase-phlorizin hydrolase (Lactase-glycosylceramidase) [Includes: Lactase (EC 3.2.1.108); Phlorizin hydrolase (EC 3.2.1.62)]",
                "3.2.1.108|3.2.1.62",
                "",
                "GH1",
                "IPR001360|IPR018120|IPR033132|IPR017853",
                "PF00232",
                "beta-glucosidase activity [GO:0008422]|glycosylceramidase activity [GO:0017042]|lactase activity [GO:0000016]|transferase activity [GO:0016740]"
            ],
            [
                "Q05820-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Lyz2",
                "Putative lysozyme C-2 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase C)",
                "3.2.1.17",
                "",
                "GH22",
                "IPR001916|IPR019799|IPR000974|IPR023346|IPR030056",
                "PF00062",
                "lysozyme activity [GO:0003796]"
            ],
            [
                "Q8VIJ5-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Oga",
                "Protein O-GlcNAcase (OGA) (EC 3.2.1.169) (Beta-N-acetylhexosaminidase) (Beta-hexosaminidase) (Bifunctional protein NCOAT) (Meningioma-expressed antigen 5) (N-acetyl-beta-D-glucosaminidase) (N-acetyl-beta-glucosaminidase)",
                "3.2.1.169",
                "",
                "GH84",
                "IPR016181|IPR011496|IPR017853",
                "PF07555",
                "[protein]-3-O-(N-acetyl-D-glucosaminyl)-L-serine/L-threonine O-N-acetyl-alpha-D-glucosaminase activity [GO:0102571]|[protein]-3-O-(N-acetyl-D-glucosaminyl)-L-serine O-N-acetyl-alpha-D-glucosaminase activity [GO:0102167]|[protein]-3-O-(N-acetyl-D-glucosaminyl)-L-threonine O-N-acetyl-alpha-D-glucosaminase activity [GO:0102166]|beta-N-acetylglucosaminidase activity [GO:0016231]|histone acetyltransferase activity [GO:0004402]"
            ],
            [
                "Q71RP1-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Hpse",
                "Heparanase (EC 3.2.1.166) (Endo-glucoronidase) [Cleaved into: Heparanase 8 kDa subunit; Heparanase 50 kDa subunit]",
                "3.2.1.166",
                "",
                "GH79",
                "IPR005199|IPR017853",
                "PF03662",
                "heparanase activity [GO:0030305]"
            ],
            [
                "Q9Z2Y9-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Kl",
                "Klotho (EC 3.2.1.31) [Cleaved into: Klotho peptide]",
                "3.2.1.31",
                "",
                "GH1",
                "IPR001360|IPR033132|IPR017853|IPR028546",
                "PF00232",
                "beta-glucosidase activity [GO:0008422]|beta-glucuronidase activity [GO:0004566]|fibroblast growth factor binding [GO:0017134]|fibroblast growth factor receptor binding [GO:0005104]"
            ],
            [
                "Q9Z2Q3-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Hyal2",
                "Hyaluronidase-2 (Hyal-2) (EC 3.2.1.35) (Hyaluronoglucosaminidase-2)",
                "3.2.1.35",
                "3.2.1.35",
                "GH56",
                "IPR013785|IPR017853|IPR018155",
                "PF01630",
                "hyaluronic acid binding [GO:0005540]|hyaluronoglucuronidase activity [GO:0033906]|hyalurononglucosaminidase activity [GO:0004415]|receptor signaling protein tyrosine kinase inhibitor activity [GO:0030294]|virus receptor activity [GO:0001618]"
            ],
            [
                "Q76HM9-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Hyal3",
                "Hyaluronidase-3 (Hyal-3) (EC 3.2.1.35) (Hyaluronoglucosaminidase-3)",
                "3.2.1.35",
                "3.2.1.35",
                "GH56",
                "IPR013785|IPR013032|IPR017853|IPR018155|IPR027260",
                "PF01630",
                "hyalurononglucosaminidase activity [GO:0004415]"
            ],
            [
                "Q76HN1-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Hyal1",
                "Hyaluronidase-1 (Hyal-1) (EC 3.2.1.35) (Hyaluronoglucosaminidase-1)",
                "3.2.1.35",
                "3.2.1.35",
                "GH56",
                "IPR013785|IPR017853|IPR018155",
                "PF01630",
                "hyaluronan synthase activity [GO:0050501]|hyalurononglucosaminidase activity [GO:0004415]|transcription factor binding [GO:0008134]"
            ],
            [
                "Q62803-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Spam1",
                "Hyaluronidase PH-20 (Hyal-PH20) (EC 3.2.1.35) (Hyaluronoglucosaminidase PH-20) (Sperm adhesion molecule 1) (Sperm surface antigen 2B1) (Sperm surface protein PH-20)",
                "3.2.1.35",
                "",
                "GH56",
                "IPR013785|IPR017853|IPR018155|IPR001439",
                "PF01630",
                "hyalurononglucosaminidase activity [GO:0004415]"
            ],
            [
                "B2GUY0-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Man1b1",
                "Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase (EC 3.2.1.113) (ER alpha-1,2-mannosidase) (ER mannosidase 1) (ERMan1) (Mannosidase alpha class 1B member 1)",
                "3.2.1.113",
                "",
                "GH47",
                "IPR012341|IPR001382|IPR036026",
                "PF01532",
                "calcium ion binding [GO:0005509]|mannosyl-oligosaccharide 1,2-alpha-mannosidase activity [GO:0004571]"
            ],
            [
                "P00697-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Lyz1",
                "Lysozyme C-1 (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase C)",
                "3.2.1.17",
                "",
                "GH22",
                "IPR001916|IPR019799|IPR000974|IPR023346|IPR030056",
                "PF00062",
                "hydrolase activity, acting on glycosyl bonds [GO:0016798]|lysozyme activity [GO:0003796]"
            ],
            [
                "Q64627-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Neu2",
                "Sialidase-2 (EC 3.2.1.18) (Cytosolic sialidase) (N-acetyl-alpha-neuraminidase 2)",
                "3.2.1.18",
                "",
                "GH33",
                "IPR011040|IPR026945|IPR026856|IPR036278",
                "PF13088",
                "exo-alpha-(2->3)-sialidase activity [GO:0052794]|exo-alpha-(2->6)-sialidase activity [GO:0052795]|exo-alpha-(2->8)-sialidase activity [GO:0052796]|exo-alpha-sialidase activity [GO:0004308]"
            ],
            [
                "Q99PW3-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Neu1",
                "Sialidase-1 (EC 3.2.1.18) (Lysosomal sialidase) (N-acetyl-alpha-neuraminidase 1)",
                "3.2.1.18",
                "",
                "GH33",
                "IPR011040|IPR026856|IPR036278",
                "PF13088",
                "exo-alpha-(2->3)-sialidase activity [GO:0052794]|exo-alpha-(2->6)-sialidase activity [GO:0052795]|exo-alpha-(2->8)-sialidase activity [GO:0052796]|exo-alpha-sialidase activity [GO:0004308]"
            ],
            [
                "Q99PW5-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Neu3",
                "Sialidase-3 (EC 3.2.1.18) (Ganglioside sialidase) (Membrane sialidase) (N-acetyl-alpha-neuraminidase 3)",
                "3.2.1.18",
                "",
                "GH33",
                "IPR011040|IPR026944|IPR026856|IPR036278",
                "PF13088",
                "exo-alpha-(2->3)-sialidase activity [GO:0052794]|exo-alpha-(2->6)-sialidase activity [GO:0052795]|exo-alpha-(2->8)-sialidase activity [GO:0052796]|exo-alpha-sialidase activity [GO:0004308]"
            ],
            [
                "P23739-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Si",
                "Sucrase-isomaltase, intestinal [Cleaved into: Sucrase (EC 3.2.1.48); Isomaltase (EC 3.2.1.10)]",
                "3.2.1.48|3.2.1.10",
                "3.2.1.10",
                "GH31",
                "IPR031727|IPR011013|IPR000322|IPR030458|IPR030459|IPR013780|IPR017853|IPR017957|IPR000519",
                "PF01055|PF16863|PF00088",
                "beta-fructofuranosidase activity [GO:0004564]|carbohydrate binding [GO:0030246]|oligo-1,6-glucosidase activity [GO:0004574]|sucrose alpha-glucosidase activity [GO:0004575]"
            ],
            [
                "O88941-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Mogs",
                "Mannosyl-oligosaccharide glucosidase (EC 3.2.1.106) (Glycoprotein-processing glucosidase I)",
                "3.2.1.106",
                "",
                "GH63",
                "IPR008928|IPR012341|IPR031335|IPR031631|IPR038518|IPR004888",
                "PF03200|PF16923",
                "mannosyl-oligosaccharide glucosidase activity [GO:0004573]"
            ],
            [
                "Q641X3-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Hexa",
                "Beta-hexosaminidase subunit alpha (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit alpha) (Hexosaminidase subunit A) (N-acetyl-beta-glucosaminidase subunit alpha)",
                "3.2.1.52",
                "",
                "GH20",
                "IPR025705|IPR015883|IPR017853|IPR029018|IPR029019",
                "PF00728|PF14845",
                "beta-N-acetylhexosaminidase activity [GO:0004563]|N-acetyl-beta-D-galactosaminidase activity [GO:0102148]"
            ],
            [
                "Q6AXR4-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Hexb",
                "Beta-hexosaminidase subunit beta (EC 3.2.1.52) (Beta-N-acetylhexosaminidase subunit beta) (Hexosaminidase subunit B) (N-acetyl-beta-glucosaminidase subunit beta)",
                "3.2.1.52",
                "",
                "GH20",
                "IPR025705|IPR015883|IPR017853|IPR029018|IPR029019",
                "PF00728|PF14845",
                "beta-N-acetylglucosaminidase activity [GO:0016231]|carbohydrate binding [GO:0030246]|hexosaminidase activity [GO:0015929]|N-acetyl-beta-D-galactosaminidase activity [GO:0102148]|protein heterodimerization activity [GO:0046982]|protein homodimerization activity [GO:0042803]"
            ],
            [
                "Q5XIL5-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Glb1l3",
                "Beta-galactosidase-1-like protein 3 (EC 3.2.1.-)",
                "3.2.1.-",
                "",
                "GH35",
                "IPR026283|IPR008979|IPR031330|IPR019801|IPR001944|IPR017853",
                "PF01301",
                "beta-galactosidase activity [GO:0004565]"
            ],
            [
                "Q5GF25-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Manea",
                "Glycoprotein endo-alpha-1,2-mannosidase (Endo-alpha mannosidase) (Endomannosidase) (rEndo) (EC 3.2.1.130) (Endo-alpha-D-mannosidase) (Enman)",
                "3.2.1.130",
                "3.2.1.130",
                "GH99",
                "IPR026071",
                "PF16317",
                "alpha-mannosidase activity [GO:0004559]|glycoprotein endo-alpha-1,2-mannosidase activity [GO:0004569]"
            ],
            [
                "Q6P7A9-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Gaa",
                "Lysosomal alpha-glucosidase (EC 3.2.1.20) (Acid maltase)",
                "3.2.1.20",
                "",
                "GH31",
                "IPR031727|IPR011013|IPR000322|IPR030458|IPR030459|IPR025887|IPR013780|IPR017853|IPR017957|IPR000519",
                "PF13802|PF01055|PF16863|PF00088",
                "alpha-1,4-glucosidase activity [GO:0004558]|carbohydrate binding [GO:0030246]|maltose alpha-glucosidase activity [GO:0032450]"
            ],
            [
                "P28494-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Man2a1",
                "Alpha-mannosidase 2 (EC 3.2.1.114) (Golgi alpha-mannosidase II) (AMan II) (Man II) (Mannosidase alpha class 2A member 1) (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase)",
                "3.2.1.114",
                "",
                "GH38",
                "IPR011013|IPR011330|IPR011682|IPR015341|IPR037094|IPR000602|IPR027291|IPR028995|IPR013780",
                "PF09261|PF07748|PF01074",
                "alpha-mannosidase activity [GO:0004559]|carbohydrate binding [GO:0030246]|hydrolase activity, hydrolyzing N-glycosyl compounds [GO:0016799]|mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity [GO:0004572]|metal ion binding [GO:0046872]"
            ],
            [
                "Q5M868-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Gba2",
                "Non-lysosomal glucosylceramidase (NLGase) (EC 3.2.1.45) (Beta-glucocerebrosidase 2) (Beta-glucosidase 2) (Bile acid beta-glucosidase GBA2) (Bile acid glucosyl transferase GBA2) (Cholesterol glucosyltransferase GBA2) (EC 2.4.1.-) (Cholesteryl-beta-glucosidase GBA2) (EC 3.2.1.104) (Glucosylceramidase 2)",
                "3.2.1.45|2.4.1.-|3.2.1.104",
                "",
                "GH116",
                "IPR008928|IPR012341|IPR014551|IPR006775|IPR024462",
                "PF04685|PF12215",
                "beta-glucosidase activity [GO:0008422]|glucosylceramidase activity [GO:0004348]|glucosyltransferase activity [GO:0046527]|steryl-beta-glucosidase activity [GO:0050295]"
            ],
            [
                "P21139-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Man2c1",
                "Alpha-mannosidase 2C1 (EC 3.2.1.24) (Alpha-D-mannoside mannohydrolase) (Mannosidase alpha class 2C member 1)",
                "3.2.1.24",
                "",
                "GH38",
                "IPR011013|IPR041147|IPR011330|IPR011682|IPR015341|IPR037094|IPR000602|IPR027291|IPR028995",
                "PF09261|PF17677|PF07748|PF01074",
                "alpha-mannosidase activity [GO:0004559]|carbohydrate binding [GO:0030246]|metal ion binding [GO:0046872]"
            ],
            [
                "Q4FZV0-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Manba",
                "Beta-mannosidase (EC 3.2.1.25) (Lysosomal beta A mannosidase) (Mannanase) (Mannase)",
                "3.2.1.25",
                "",
                "GH2",
                "IPR036156|IPR041625|IPR008979|IPR006103|IPR017853|IPR013783|IPR041447",
                "PF02836|PF17753|PF17786",
                "beta-mannosidase activity [GO:0004567]|mannose binding [GO:0005537]"
            ],
            [
                "Q01460-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Ctbs",
                "Di-N-acetylchitobiase (EC 3.2.1.-)",
                "3.2.1.-",
                "",
                "GH18",
                "IPR011583|IPR029070|IPR001223|IPR001579|IPR017853",
                "PF00704",
                "chitinase activity [GO:0004568]|chitin binding [GO:0008061]|hydrolase activity, acting on glycosyl bonds [GO:0016798]"
            ],
            [
                "Q66H12-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Naga",
                "Alpha-N-acetylgalactosaminidase (EC 3.2.1.49) (Alpha-galactosidase B)",
                "3.2.1.49",
                "",
                "GH27",
                "IPR013785|IPR002241|IPR000111|IPR013780|IPR017853|IPR035373",
                "PF16499|PF17450",
                "alpha-galactosidase activity [GO:0004557]|alpha-N-acetylgalactosaminidase activity [GO:0008456]|protein homodimerization activity [GO:0042803]"
            ],
            [
                "Q794F9-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Slc3a2",
                "4F2 cell-surface antigen heavy chain (4F2hc) (Solute carrier family 3 member 2) (CD antigen CD98)",
                "",
                "",
                "GH13",
                "IPR006047|IPR013780|IPR017853|IPR042280|IPR031984",
                "PF00128|PF16028",
                "catalytic activity [GO:0003824]|neutral amino acid transmembrane transporter activity [GO:0015175]"
            ],
            [
                "Q9WTV1-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Chi3l1",
                "Chitinase-3-like protein 1 (Cartilage glycoprotein 39) (CGP-39) (GP-39)",
                "",
                "",
                "GH18",
                "IPR028538|IPR011583|IPR029070|IPR001223|IPR017853",
                "PF00704",
                "carbohydrate binding [GO:0030246]|chitin binding [GO:0008061]"
            ],
            [
                "Q64319-1",
                "Rattus norvegicus (Rat)",
                "reviewed",
                "Slc3a1",
                "Neutral and basic amino acid transport protein rBAT (D2) (Solute carrier family 3 member 1) (b(0,+)-type amino acid transport protein) (NAA-TR)",
                "",
                "",
                "GH13",
                "IPR006047|IPR013780|IPR017853",
                "PF00128",
                "catalytic activity [GO:0003824]|protein heterodimerization activity [GO:0046982]"
            ]
        ]
    },
    "readme": "Name\n   - Rat Glycohydrolases\n\nVersion\n   - 1.11.2\n\nCreated on\n  - 2019-09-11T17:20:18.184619\n\nModified on\n   - 2020-04-10T12:12:13.136231\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Rahi Navelkar [rsn13@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Xavier Holmes [xavierh@email.gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Amanda Bell [amandab2140@gwu.edu], Jonathon Keeney [keeneyjg@gwu.edu], Millicent Quartey [mquartey@email.gwu.edu]\n\nAuthors\n   - \n\nChecksum\n   - \n\nUsability Domain\n   - The Rat Glycohydrolases dataset contains a list of rat [taxid:9606] glycohydrolases derived from UniProtKB database using advanced search and other databases including CAZy, InterPro and Pfam. . If you use this dataset please provide proper attribution to EMBL-EBI-UniProtKB and GlyGen\n\nDescription Domain\n   Keywords\n   - glycohydrolase\n   - glycosidase\n   - EC Number\n   - CAZy\n\n   Pipeline Steps\n   - Step-1: The script maps and replaces the UniProtKB accession to the UniProtKB canonical accession\n\nExecution Domain\n   Scripts   - https://github.com/GW-HIVE/glygen-backend-integration/blob/master/pipeline/integrator/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: rat_protein_masterlist.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-1.12.3/reviewed/rat_protein_masterlist.csv\n      Name: rat_protein_glycohydrolase.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-1.12.3/compiled/rat_protein_glycohydrolase.csv\n   Output Subdomain\n      Name: rat_protein_glycohydrolase.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-1.12.3/reviewed/rat_protein_glycohydrolase.csv\n      Name: rat_protein_glycohydrolase.stat.csv\n      URI: https:/data.glygen.org/ln2releases/data/v-1.12.3/reviewed/rat_protein_glycohydrolase.stat.csv\n\nFields\n      Name: \"uniprotkb_canonical_ac\"\n     Description: \"\"\n      Unique Values: \"35\"\n      Name: \"species\"\n     Description: \"Species of the protein.\"\n      Unique Values: \"1\"\n      Name: \"status\"\n     Description: \"Status of the protein record in UniProtKB database that can be reviewed for UniProtKB/Swiss-Prot entry or unreviewed for UniProtKB/TrEMBL entry\"\n      Unique Values: \"1\"\n      Name: \"gene_symbol\"\n     Description: \"\"Official gene name/symbol assigned to the gene. Human gene names/symbols are approved by the HUGO Gene Nomenclature Committee (HGNC)\"\n      Unique Values: \"35\"\n      Name: \"uniprotkb_protein_name\"\n     Description: \"Name of the protein in UniProtKB database\"\n      Unique Values: \"35\"\n      Name: \"ec_number\"\n     Description: \"Enzyme Commision number assigned to an enzyme by Nomenclature Committee of the International Union of Biochemistry and Molecular Biology (IUBMB)\"\n      Unique Values: \"23\"\n      Name: \"brenda_ec_number\"\n     Description: \"Enzyme Commission (EC) number assigned to enzyme in BRENDA database\"\n      Unique Values: \"5\"\n      Name: \"cazy_gh_gamily\"\n     Description: \"The family assigned to glycohydrolase in the CAZy database\"\n      Unique Values: \"19\"\n      Name: \"interpro_id\"\n     Description: \"InterPro Identifier\"\n      Unique Values: \"32\"\n      Name: \"pfam_ac\"\n     Description: \"Accession assigned to the protein family in the Pfam database\"\n      Unique Values: \"25\"\n      Name: \"go_molecular_function\"\n     Description: \"\"The elemental activities of a gene product at the molecular level\"\n      Unique Values: \"32\"",
    "downloadurl": "/ln2data/releases/data/v-1.12.3/reviewed/rat_protein_glycohydrolase.csv"
}
