{ "bcoid": "GLY_000235", "title": "Mouse Protein Citations (RefSeq)", "description": "The Mouse Protein Citations (RefSeq) datasets contains mouse [taxid:10090] UniProtKB accessions mapped ...", "filename": "mouse_protein_citations_refseq.csv", "filetype": "csv", "categories": { "species": "Mus musculus", "molecule": "Protein", "tags": "Protein Citations", "file_type": "csv", "status": "Reviewed", "scope": "internal" }, "minitable": { "content": [ [ "Q9CQN6-1...", "Discovery of..." ], [ "P34914-1...", "Preservation..." ] ], "headers": [ "uniprotkb_ca...", "title..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "uniprotkb_canonical_ac" }, { "type": "string", "label": "title" }, { "type": "string", "label": "journal_name" }, { "type": "string", "label": "publication_date" }, { "type": "string", "label": "authors" }, { "type": "string", "label": "xref_key" }, { "type": "string", "label": "xref_id" }, { "type": "string", "label": "src_xref_key" }, { "type": "string", "label": "src_xref_id" } ], [ "Q9CQN6-1", "Discovery of genes essential for heme biosynthesis through large-scale gene expression analysis.", "Cell metabolism", "2009 Aug", "Nilsson R, Schultz IJ, Pierce EL, Soltis KA, Naranuntarat A, Ward DM, Baughman JM, Paradkar PN, Kingsley PD, Culotta VC, Kaplan J, Palis J, Paw BH, Mootha VK", "protein_xref_pubmed", "19656490", "protein_xref_refseq", "NP_079663" ], [ "P34914-1", "Preservation of epoxyeicosatrienoic acid bioavailability prevents renal allograft dysfunction and cardiovascular alterations in kidney transplant recipients.", "Scientific reports", "2021 Feb 12", "Duflot T, Laurent C, Soudey A, Fonrose X, Hamzaoui M, Iacob M, Bertrand D, Favre J, Etienne I, Roche C, Coquerel D, Le Besnerais M, Louhichi S, Tarlet T, Li D, Brunel V, Morisseau C, Richard V, Joannides R, Stanke-Labesque F, Lamoureux F, Guerrot D, Bellien J", "protein_xref_pubmed", "33580125", "protein_xref_refseq", "NP_001258332" ], [ "P46096-1", "Neuromodulator release in neurons requires two functionally redundant calcium sensors.", "Proceedings of the National Academy of Sciences of the United States of America", "2021 May 4", "van Westen R, Poppinga J, Diez Arazola R, Toonen RF, Verhage M", "protein_xref_pubmed", "33903230", "protein_xref_refseq", "NP_001239270" ], [ "Q9CX47-1", "XRCC2 mutation causes meiotic arrest, azoospermia and infertility.", "Journal of medical genetics", "2018 Sep", "Yang Y, Guo J, Dai L, Zhu Y, Hu H, Tan L, Chen W, Liang D, He J, Tu M, Wang K, Wu L", "protein_xref_pubmed", "30042186", "protein_xref_refseq", "NP_065595" ], [ "Q921U8-1", "Smoothelin-B deficiency results in reduced arterial contractility, hypertension, and cardiac hypertrophy in mice.", "Circulation", "2008 Aug 19", "Rensen SS, Niessen PM, van Deursen JM, Janssen BJ, Heijman E, Hermeling E, Meens M, Lie N, Gijbels MJ, Strijkers GJ, Doevendans PA, Hofker MH, De Mey JG, van Eys GJ", "protein_xref_pubmed", "18678771", "protein_xref_refseq", "NP_001152756" ], [ "Q8R5M8-1", "Potentiating the Antitumor Activity of Cytotoxic T Cells via the Transmembrane Domain of IGSF4 That Increases TCR Avidity.", "Frontiers in immunology", "2020", "Kim HR, Park JS, Fatima Y, Kausar M, Park JH, Jun CD", "protein_xref_pubmed", "33597944", "protein_xref_refseq", "NP_001020771" ], [ "Q9Z0H4-1", "Interleukin-10 control of pre-miR155 maturation involves CELF2.", "PloS one", "2020", "Yoon JSJ, Wu MK, Zhu TH, Zhao H, Cheung ST, Chamberlain TC, Mui AL", "protein_xref_pubmed", "32324763", "protein_xref_refseq", "NP_001297376" ], [ "Q9JIC3-1", "Deficiency in SNM1 abolishes an early mitotic checkpoint induced by spindle stress.", "Molecular and cellular biology", "2004 Dec", "Akhter S, Richie CT, Deng JM, Brey E, Zhang X, Patrick C Jr, Behringer RR, Legerski RJ", "protein_xref_pubmed", "15542852", "protein_xref_refseq", "NP_061301" ], [ "O08707-1", "Analysis of lung stromal expression of the atypical chemokine receptor ACKR2 reveals unanticipated expression in murine blood endothelial cells.", "European journal of immunology", "2020 May", "Hansell CAH, Love S, Pingen M, Wilson GJ, MacLeod M, Graham GJ", "protein_xref_pubmed", "32114694", "protein_xref_refseq", "NP_001263648" ], [ "Q8CDG5-1", "Loss of CREBRF Reduces Anxiety-like Behaviors and Circulating Glucocorticoids in Male and Female Mice.", "Endocrinology", "2020 Nov 1", "Frahm KA, Williams AA, Wood AN, Ewing MC, Mattila PE, Chuan BW, Guo L, Shah FA, O'Donnell CP, Lu R, DeFranco DB", "protein_xref_pubmed", "32901804", "protein_xref_refseq", "NP_084146" ], [ "E9Q5I3-1", "The mouse Muc5b mucin gene: cDNA and genomic structures, chromosomal localization and expression.", "The Biochemical journal", "2002 May 1", "Escande F, Porchet N, Aubert JP, Buisine MP", "protein_xref_pubmed", "11964160", "protein_xref_refseq", "NP_083077" ], [ "Q8VI75-1", "The role of metallothionein in the pathogenesis of acute lung injury.", "American journal of respiratory cell and molecular biology", "2006 Jan", "Wesselkamper SC, McDowell SA, Medvedovic M, Dalton TP, Deshmukh HS, Sartor MA, Case LM, Henning LN, Borchers MT, Tomlinson CR, Prows DR, Leikauf GD", "protein_xref_pubmed", "16166738", "protein_xref_refseq", "NP_077229" ], [ "P07310-1", "Acetylation of muscle creatine kinase negatively impacts high-energy phosphotransfer in heart failure.", "JCI insight", "2021 Feb 8", "Walker MA, Chavez J, Villet O, Tang X, Keller A, Bruce JE, Tian R", "protein_xref_pubmed", "33554956", "protein_xref_refseq", "NP_031736" ], [ "Q9EPK5-1", "TAZ interacts with TTF-1 and regulates expression of surfactant protein-C.", "The Journal of biological chemistry", "2004 Apr 23", "Park KS, Whitsett JA, Di Palma T, Hong JH, Yaffe MB, Zannini M", "protein_xref_pubmed", "14970209", "protein_xref_refseq", "NP_001161753" ], [ "Q9CWS0-1", "Mechanical force promotes dimethylarginine dimethylaminohydrolase 1-mediated hydrolysis of the metabolite asymmetric dimethylarginine to enhance bone formation.", "Nature communications", "2022 Jan 10", "Xie Z, Hou L, Shen S, Wu Y, Wang J, Jie Z, Zhao X, Li X, Zhang X, Chen J, Xu W, Ning L, Ma Q, Wang S, Wang H, Yuan P, Fang X, Qin A, Fan S", "protein_xref_pubmed", "35013196", "protein_xref_refseq", "NP_081269" ], [ "P58391-1", "AMPK upregulates KCa2.3 channels and ameliorates endothelial dysfunction in diet-induced obese mice.", "Biochemical pharmacology", "2021 Jan", "Pang ZD, Wang Y, Song Z, She G, Ma XZ, Sun X, Wu W, Lai BC, Zhang J, Zhang Y, Du XJ, Shyy JYJ, Deng XL", "protein_xref_pubmed", "33186592", "protein_xref_refseq", "NP_536714" ], [ "Q9ERD8-1", "gamma-Parvin is dispensable for hematopoiesis, leukocyte trafficking, and T-cell-dependent antibody response.", "Molecular and cellular biology", "2006 Mar", "Chu H, Thievessen I, Sixt M, Lammermann T, Waisman A, Braun A, Noegel AA, Fassler R", "protein_xref_pubmed", "16479001", "protein_xref_refseq", "NP_001155972" ], [ "P97819-1", "Type 1 interferon-dependent repression of NLRC4 and iPLA2 licenses down-regulation of Salmonella flagellin inside macrophages.", "Proceedings of the National Academy of Sciences of the United States of America", "2020 Nov 24", "Akhade AS, Atif SM, Lakshmi BS, Dikshit N, Hughes KT, Qadri A, Subramanian N", "protein_xref_pubmed", "33177235", "protein_xref_refseq", "NP_001185952" ], [ "Q9DAP7-1", "Loss of the histone chaperone ASF1B reduces female reproductive capacity in mice.", "Reproduction (Cambridge, England)", "2016 May", "Messiaen S, Guiard J, Aigueperse C, Fliniaux I, Tourpin S, Barroca V, Allemand I, Fouchet P, Livera G, Vernet M", "protein_xref_pubmed", "26850882", "protein_xref_refseq", "NP_077146" ], [ "Q8VEL2-1", "Muscle-specific inositide phosphatase (MIP/MTMR14) is reduced with age and its loss accelerates skeletal muscle aging process by altering calcium homeostasis.", "Aging", "2010 Aug", "Romero-Suarez S, Shen J, Brotto L, Hall T, Mo C, Valdivia HH, Andresen J, Wacker M, Nosek TM, Qu CK, Brotto M", "protein_xref_pubmed", "20817957", "protein_xref_refseq", "NP_081125" ], [ "Q9CQR4-1", "Interacting proteins dictate function of the minimal START domain phosphatidylcholine transfer protein/StarD2.", "The Journal of biological chemistry", "2007 Oct 19", "Kanno K, Wu MK, Agate DS, Fanelli BJ, Wagle N, Scapa EF, Ukomadu C, Cohen DE", "protein_xref_pubmed", "17704541", "protein_xref_refseq", "NP_080066" ], [ "P24638-1", "Mutation in the gene encoding lysosomal acid phosphatase (Acp2) causes cerebellum and skin malformation in mouse.", "Neurogenetics", "2004 Dec", "Mannan AU, Roussa E, Kraus C, Rickmann M, Maenner J, Nayernia K, Krieglstein K, Reis A, Engel W", "protein_xref_pubmed", "15503243", "protein_xref_refseq", "NP_031413" ], [ "Q3UPW2-1", "Epithelial tumor suppressor ELF3 is a lineage-specific amplified oncogene in lung adenocarcinoma.", "Nature communications", "2019 Nov 28", "Enfield KSS, Marshall EA, Anderson C, Ng KW, Rahmati S, Xu Z, Fuller M, Milne K, Lu D, Shi R, Rowbotham DA, Becker-Santos DD, Johnson FD, English JC, MacAulay CE, Lam S, Lockwood WW, Chari R, Karsan A, Jurisica I, Lam WL", "protein_xref_pubmed", "31780666", "protein_xref_refseq", "NP_001156603" ], [ "Q80VH0-1", "ZFP521 contributes to pre-B-cell lymphomagenesis through modulation of the pre-B-cell receptor signaling pathway.", "Oncogene", "2016 Jun 23", "Hiratsuka T, Takei Y, Ohmori R, Imai Y, Ozeki M, Tamaki K, Haga H, Nakamura T, Tsuruyama T", "protein_xref_pubmed", "26522721", "protein_xref_refseq", "NP_001297678" ], [ "Q9JL10-1", "Sei-1 promotes double minute chromosomes formation through activation of the PI3K/Akt/BRCA1-Abraxas pathway and induces double-strand breaks in NIH-3T3 fibroblasts.", "Cell death & disease", "2018 Mar 1", "Tian X, Liu C, Wang X, Wang F, Wang L, Xu L, Ma J, Gao Y, Bao Y, Wang F, Sun L, Wei J, Lin C, Zhang H, Zhu G, Guan X, Fu S, Zhang C", "protein_xref_pubmed", "29497033", "protein_xref_refseq", "NP_061290" ], [ "E9Q842-1", "Nav2 is necessary for cranial nerve development and blood pressure regulation.", "Neural development", "2010 Feb 25", "McNeill EM, Roos KP, Moechars D, Clagett-Dame M", "protein_xref_pubmed", "20184720", "protein_xref_refseq", "NP_780481" ], [ "Q9D198-1", "Disruption of murine mp29/Syf2/Ntc31 gene results in embryonic lethality with aberrant checkpoint response.", "PloS one", "2012", "Chen CH, Chu PC, Lee L, Lien HW, Lin TL, Fan CC, Chi P, Huang CJ, Chang MS", "protein_xref_pubmed", "22448250", "protein_xref_refseq", "NP_081056" ], [ "Q9JKK0-1", "Differential expression of members of the RCAN family of calcineurin regulators suggests selective functions for these proteins in the brain.", "The European journal of neuroscience", "2007 Sep", "Porta S, Marti E, de la Luna S, Arbones ML", "protein_xref_pubmed", "17767500", "protein_xref_refseq", "NP_075356" ], [ "Q64010-1", "A novel viral oncogene with structural similarity to phospholipase C.", "Nature", "1988 Mar 17", "Mayer BJ, Hamaguchi M, Hanafusa H", "protein_xref_pubmed", "2450282", "protein_xref_refseq", "NP_598417" ], [ "Q9D0S4-1", "Neur1 and Neur2 are required for hippocampus-dependent spatial memory and synaptic plasticity.", "Hippocampus", "2020 Nov", "Lee J, Yoon KJ, Park P, Lee C, Kim MJ, Han DH, Kim JI, Kim S, Lee HR, Lee Y, Jang EH, Ko HG, Kong YY, Kaang BK", "protein_xref_pubmed", "32644222", "protein_xref_refseq", "NP_001076443" ], [ "Q99LJ8-1", "Identification of a receptor necessary for Nogo-B stimulated chemotaxis and morphogenesis of endothelial cells.", "Proceedings of the National Academy of Sciences of the United States of America", "2006 Jul 18", "Miao RQ, Gao Y, Harrison KD, Prendergast J, Acevedo LM, Yu J, Hu F, Strittmatter SM, Sessa WC", "protein_xref_pubmed", "16835300", "protein_xref_refseq", "NP_084526" ], [ "P56857-1", "Claudin-18 Loss Alters Transcellular Chloride Flux but not Tight Junction Ion Selectivity in Gastric Epithelial Cells.", "Cellular and molecular gastroenterology and hepatology", "2021", "Caron TJ, Scott KE, Sinha N, Muthupalani S, Baqai M, Ang LH, Li Y, Turner JR, Fox JG, Hagen SJ", "protein_xref_pubmed", "33069918", "protein_xref_refseq", "NP_001181850" ], [ "Q9CQ70-1", "Histone Variant H2A.L.2 Guides Transition Protein-Dependent Protamine Assembly in Male Germ Cells.", "Molecular cell", "2017 Apr 6", "Barral S, Morozumi Y, Tanaka H, Montellier E, Govin J, de Dieuleveult M, Charbonnier G, Coute Y, Puthier D, Buchou T, Boussouar F, Urahama T, Fenaille F, Curtet S, Hery P, Fernandez-Nunez N, Shiota H, Gerard M, Rousseaux S, Kurumizaka H, Khochbin S", "protein_xref_pubmed", "28366643", "protein_xref_refseq", "NP_080903" ], [ "Q80V62-1", "FANCD2 and HES1 suppress inflammation-induced PPAR to prevent haematopoietic stem cell exhaustion.", "British journal of haematology", "2021 Feb", "Wu L, Li X, Lin Q, Chowdhury F, Mazumder MH, Du W", "protein_xref_pubmed", "33222180", "protein_xref_refseq", "NP_001334279" ], [ "Q9Z222-1", "N-linked polylactosamine glycan synthesis is regulated by co-expression of beta3GnT2 and GCNT2.", "Journal of cellular physiology", "2014 Apr", "Henion TR, Schwarting GA", "protein_xref_pubmed", "24105809", "protein_xref_refseq", "NP_001162585" ], [ "Q8BMS2-1", "The extracellular matrix protein mindin is a pattern-recognition molecule for microbial pathogens.", "Nature immunology", "2004 Jan", "He YW, Li H, Zhang J, Hsu CL, Lin E, Zhang N, Guo J, Forbush KA, Bevan MJ", "protein_xref_pubmed", "14691481", "protein_xref_refseq", "NP_598664" ], [ "Q9Z1M0-1", "The Improvement of Sepsis-Associated Encephalopathy by P2X7R Inhibitor through Inhibiting the Omi/HtrA2 Apoptotic Signaling Pathway.", "Behavioural neurology", "2022", "Wang K, Sun M, Juan Z, Zhang J, Sun Y, Wang G, Wang C, Li Y, Kong W, Fan L, Zhang Y, Zhao H, Zhao X", "protein_xref_pubmed", "35126784", "protein_xref_refseq", "NP_001033928" ], [ "Q9JLM8-1", "Notch signaling drives development of Barrett's metaplasia from Dclk1-positive epithelial tuft cells in the murine gastric mucosa.", "Scientific reports", "2021 Feb 24", "Kunze B, Middelhoff M, Maurer HC, Agibalova T, Anand A, Buhrer AM, Fang HY, Baumeister T, Steiger K, Strangmann J, Schmid RM, Wang TC, Quante M", "protein_xref_pubmed", "33627749", "protein_xref_refseq", "NP_001104522" ], [ "Q99PI5-1", "Lipin 2/3 phosphatidic acid phosphatases maintain phospholipid homeostasis to regulate chylomicron synthesis.", "The Journal of clinical investigation", "2019 Jan 2", "Zhang P, Csaki LS, Ronquillo E, Baufeld LJ, Lin JY, Gutierrez A, Dwyer JR, Brindley DN, Fong LG, Tontonoz P, Young SG, Reue K", "protein_xref_pubmed", "30507612", "protein_xref_refseq", "NP_075020" ], [ "Q8BWY3-1", "Reverse transcriptase of Moloney murine leukemia virus binds to eukaryotic release factor 1 to modulate suppression of translational termination.", "Cell", "2003 Oct 31", "Orlova M, Yueh A, Leung J, Goff SP", "protein_xref_pubmed", "14636559", "protein_xref_refseq", "NP_659115" ], [ "P0DOV2-1", "P200 family protein IFI204 negatively regulates type I interferon responses by targeting IRF7 in nucleus.", "PLoS pathogens", "2019 Oct", "Cao L, Ji Y, Zeng L, Liu Q, Zhang Z, Guo S, Guo X, Tong Y, Zhao X, Li CM, Chen Y, Guo D", "protein_xref_pubmed", "31603949", "protein_xref_refseq", "NP_032355" ], [ "Q9ESZ8-1", "Mutant GTF2I induces cell transformation and metabolic alterations in thymic epithelial cells.", "Cell death and differentiation", "2020 Jul", "Kim IK, Rao G, Zhao X, Fan R, Avantaggiati ML, Wang Y, Zhang YW, Giaccone G", "protein_xref_pubmed", "32034314", "protein_xref_refseq", "NP_001074215" ], [ "P01139-1", "proNGF Involvement in the Adult Neurogenesis Dysfunction in Alzheimer's Disease.", "International journal of molecular sciences", "2021 Oct 4", "Olabiyi BF, Fleitas C, Zammou B, Ferrer I, Rampon C, Egea J, Espinet C", "protein_xref_pubmed", "34639085", "protein_xref_refseq", "NP_001106168" ], [ "P16125-1", "Expression of lactate dehydrogenase A and B isoforms in the mouse kidney.", "American journal of physiology. Renal physiology", "2021 May 1", "Osis G, Traylor AM, Black LM, Spangler D, George JF, Zarjou A, Verlander JW, Agarwal A", "protein_xref_pubmed", "33719570", "protein_xref_refseq", "NP_001303251" ], [ "Q6VYH9-1", "Expression of the adaptor protein hematopoietic Src homology 2 is up-regulated in response to stimuli that promote survival and differentiation of B cells.", "Journal of immunology (Baltimore, Md. : 1950)", "2006 Apr 1", "Herrin BR, Justement LB", "protein_xref_pubmed", "16547253", "protein_xref_refseq", "NP_922935" ], [ "Q60837-1", "IL12Rbeta1DeltaTM is a secreted product of il12rb1 that promotes control of extrapulmonary tuberculosis.", "Infection and immunity", "2015 Feb", "Ray AA, Fountain JJ, Miller HE, Cooper AM, Robinson RT", "protein_xref_pubmed", "25404030", "protein_xref_refseq", "NP_032379" ], [ "Q9JIP4-1", "Expression of neural connexins and pannexin1 in the hippocampus and inferior olive: a quantitative approach.", "Brain research. Molecular brain research", "2005 Jan 5", "Weickert S, Ray A, Zoidl G, Dermietzel R", "protein_xref_pubmed", "15661370", "protein_xref_refseq", "NP_062355" ], [ "O08609-1", "The glucose-sensing transcription factor MLX promotes myogenesis via myokine signaling.", "Genes & development", "2015 Dec 1", "Hunt LC, Xu B, Finkelstein D, Fan Y, Carroll PA, Cheng PF, Eisenman RN, Demontis F", "protein_xref_pubmed", "26584623", "protein_xref_refseq", "NP_035680" ], [ "P10711-1", "TCEA1 regulates the proliferative potential of mouse myeloid cells.", "Experimental cell research", "2018 Sep 15", "Yang T, Cui H, Wen M, Zuber J, Kogan SC, Wei G", "protein_xref_pubmed", "30009791", "protein_xref_refseq", "NP_001153223" ], [ "P70453-1", "Phosphodiesterase 7A-deficient mice have functional T cells.", "Journal of immunology (Baltimore, Md. : 1950)", "2003 Dec 15", "Yang G, McIntyre KW, Townsend RM, Shen HH, Pitts WJ, Dodd JH, Nadler SG, McKinnon M, Watson AJ", "protein_xref_pubmed", "14662840", "protein_xref_refseq", "NP_001116231" ], [ "Q6DIC6-1", "Significant differences between mouse and human trophinins are revealed by their expression patterns and targeted disruption of mouse trophinin gene.", "Biology of reproduction", "2002 Feb", "Nadano D, Sugihara K, Paria BC, Saburi S, Copeland NG, Gilbert DJ, Jenkins NA, Nakayama J, Fukuda MN", "protein_xref_pubmed", "11804944", "protein_xref_refseq", "NP_062421" ], [ "P07758-1", "Placental HTRA1 cleaves alpha1-antitrypsin to generate a NET-inhibitory peptide.", "Blood", "2021 Sep 16", "Campbell RA, Campbell HD, Bircher JS, de Araujo CV, Denorme F, Crandell JL, Rustad JL, Monts J, Cody MJ, Kosaka Y, Yost CC", "protein_xref_pubmed", "34192300", "protein_xref_refseq", "NP_033269" ], [ "G5E870-1", "Mild iron overload induces TRIP12-mediated degradation of YY1 to trigger hepatic inflammation.", "Free radical biology & medicine", "2020 Dec", "Tang Y, Wang D, Niu X, Wu H, Yang J, Zhang Y, Song S, Lv D, Chai Y, Lu H, Shen H, Ling C, Li M", "protein_xref_pubmed", "33080340", "protein_xref_refseq", "NP_598736" ], [ "Q64GA5-1", "Induction of group IVC phospholipase A2 in allergic asthma: transcriptional regulation by TNFalpha in bronchoepithelial cells.", "The Biochemical journal", "2012 Feb 15", "Bickford JS, Newsom KJ, Herlihy JD, Mueller C, Keeler B, Qiu X, Walters JN, Su N, Wallet SM, Flotte TR, Nick HS", "protein_xref_pubmed", "22082005", "protein_xref_refseq", "NP_001004762" ], [ "Q5ND29-1", "Cystinosin, the small GTPase Rab11, and the Rab7 effector RILP regulate intracellular trafficking of the chaperone-mediated autophagy receptor LAMP2A.", "The Journal of biological chemistry", "2017 Jun 23", "Zhang J, Johnson JL, He J, Napolitano G, Ramadass M, Rocca C, Kiosses WB, Bucci C, Xin Q, Gavathiotis E, Cuervo AM, Cherqui S, Catz SD", "protein_xref_pubmed", "28465352", "protein_xref_refseq", "NP_001025109" ], [ "P33173-1", "GSK3beta Impairs KIF1A Transport in a Cellular Model of Alzheimer's Disease but Does Not Regulate Motor Motility at S402.", "eNeuro", "2020 Nov/Dec", "Gan KJ, Akram A, Blasius TL, Ramser EM, Budaitis BG, Gabrych DR, Verhey KJ, Silverman MA", "protein_xref_pubmed", "33067366", "protein_xref_refseq", "NP_001281078" ], [ "Q80ZD9-1", "Alivin 1, a novel neuronal activity-dependent gene, inhibits apoptosis and promotes survival of cerebellar granule neurons.", "The Journal of neuroscience : the official journal of the Society for Neuroscience", "2003 Jul 2", "Ono T, Sekino-Suzuki N, Kikkawa Y, Yonekawa H, Kawashima S", "protein_xref_pubmed", "12843293", "protein_xref_refseq", "NP_001158035" ], [ "O70373-1", "Localization of the novel Xin protein to the adherens junction complex in cardiac and skeletal muscle during development.", "Developmental dynamics : an official publication of the American Association of Anatomists", "2002 Sep", "Sinn HW, Balsamo J, Lilien J, Lin JJ", "protein_xref_pubmed", "12203715", "protein_xref_refseq", "NP_035854" ], [ "Q61909-1", "AML1-ETO requires enhanced C/D box snoRNA/RNP formation to induce self-renewal and leukaemia.", "Nature cell biology", "2017 Jul", "Zhou F, Liu Y, Rohde C, Pauli C, Gerloff D, Kohn M, Misiak D, Baumer N, Cui C, Gollner S, Oellerich T, Serve H, Garcia-Cuellar MP, Slany R, Maciejewski JP, Przychodzen B, Seliger B, Klein HU, Bartenhagen C, Berdel WE, Dugas M, Taketo MM, Farouq D, Schwartz S, Regev A, Hebert J, Sauvageau G, Pabst C, Huttelmaier S, Muller-Tidow C", "protein_xref_pubmed", "28650479", "protein_xref_refseq", "NP_001104496" ], [ "P97873-1", "Elastin homeostasis is altered with pelvic organ prolapse in cultures of vaginal cells from a lysyl oxidase-like 1 knockout mouse model.", "Physiological reports", "2020 Jun", "Jameson SA, Swaminathan G, Dahal S, Couri B, Kuang M, Rietsch A, Butler RS, Ramamurthi A, Damaser MS", "protein_xref_pubmed", "32533648", "protein_xref_refseq", "NP_034859" ], [ "Q8BN59-1", "Regulation of muscle differentiation and survival by Acheron.", "Mechanisms of development", "2009 Aug-Sep", "Wang Z, Glenn H, Brown C, Valavanis C, Liu JX, Seth A, Thomas JE, Karlstrom RO, Schwartz LM", "protein_xref_pubmed", "19481601", "protein_xref_refseq", "NP_080511" ], [ "Q9D9R7-1", "Male-biased expression of X-chromosomal DM domain-less Dmrt8 genes in the mouse.", "Genomics", "2006 Aug", "Veith AM, Klattig J, Dettai A, Schmidt C, Englert C, Volff JN", "protein_xref_pubmed", "16488114", "protein_xref_refseq", "NP_001033705" ], [ "Q8BHJ5-1", "TBL1XR1 Mutations Drive Extranodal Lymphoma by Inducing a Pro-tumorigenic Memory Fate.", "Cell", "2020 Jul 23", "Venturutti L, Teater M, Zhai A, Chadburn A, Babiker L, Kim D, Beguelin W, Lee TC, Kim Y, Chin CR, Yewdell WT, Raught B, Phillip JM, Jiang Y, Staudt LM, Green MR, Chaudhuri J, Elemento O, Farinha P, Weng AP, Nissen MD, Steidl C, Morin RD, Scott DW, Prive GG, Melnick AM", "protein_xref_pubmed", "32619424", "protein_xref_refseq", "NP_109657" ], [ "P59648-1", "FXYD7 is a brain-specific regulator of Na,K-ATPase alpha 1-beta isozymes.", "The EMBO journal", "2002 Jul 1", "Beguin P, Crambert G, Monnet-Tschudi F, Uldry M, Horisberger JD, Garty H, Geering K", "protein_xref_pubmed", "12093728", "protein_xref_refseq", "NP_071290" ], [ "Q8R326-1", "Synergistic upregulation of NONO and PSPC1 regulates Sertoli cell response to MEHP via modulation of ALDH1A1 signaling.", "FEBS letters", "2017 Mar", "Dong BW, Jin XH, Yan CY, Yang T, Cai GQ, Lu J", "protein_xref_pubmed", "28117896", "protein_xref_refseq", "NP_079958" ], [ "Q9JMB0-1", "Functional role of GKAP1 in the regulation of male germ cell spontaneous apoptosis and sperm number.", "Molecular reproduction and development", "2019 Sep", "Wang H, Wang G, Dai Y, Li Z, Zhu Y, Sun F", "protein_xref_pubmed", "31318116", "protein_xref_refseq", "NP_062806" ], [ "Q8C3J5-1", "The role of Dock2 on macrophage migration and functions during Citrobacter rodentium infection.", "Clinical and experimental immunology", "2021 Jun", "Ji L, Chen Y, Xie L, Liu Z", "protein_xref_pubmed", "33662140", "protein_xref_refseq", "NP_203538" ], [ "Q8CIV7-1", "Ovol2, a mammalian homolog of Drosophila ovo: gene structure, chromosomal mapping, and aberrant expression in blind-sterile mice.", "Genomics", "2002 Sep", "Li B, Dai Q, Li L, Nair M, Mackay DR, Dai X", "protein_xref_pubmed", "12213202", "protein_xref_refseq", "NP_081200" ], [ "P23611-1", "Maternal High-Fat Diet Promotes Abdominal Aortic Aneurysm Expansion in Adult Offspring by Epigenetic Regulation of IRF8-Mediated Osteoclast-like Macrophage Differentiation.", "Cells", "2021 Aug 27", "Saburi M, Yamada H, Wada N, Motoyama S, Sugimoto T, Kubota H, Miyawaki D, Wakana N, Kami D, Ogata T, Matoba S", "protein_xref_pubmed", "34571873", "protein_xref_refseq", "NP_001288740" ], [ "Q921N8-1", "GPS2-dependent corepressor/SUMO pathways govern anti-inflammatory actions of LRH-1 and LXRbeta in the hepatic acute phase response.", "Genes & development", "2010 Feb 15", "Venteclef N, Jakobsson T, Ehrlund A, Damdimopoulos A, Mikkonen L, Ellis E, Nilsson LM, Parini P, Janne OA, Gustafsson JA, Steffensen KR, Treuter E", "protein_xref_pubmed", "20159957", "protein_xref_refseq", "NP_062700" ], [ "Q921N8-1", "The corepressors GPS2 and SMRT control enhancer and silencer remodeling via eRNA transcription during inflammatory activation of macrophages.", "Molecular cell", "2021 Mar 4", "Huang Z, Liang N, Goni S, Damdimopoulos A, Wang C, Ballaire R, Jager J, Niskanen H, Han H, Jakobsson T, Bracken AP, Aouadi M, Venteclef N, Kaikkonen MU, Fan R, Treuter E", "protein_xref_pubmed", "33503407", "protein_xref_refseq", "NP_062700" ], [ "P19437-1", "Characterization of the B cell response to Leishmania infection after anti-CD20 B cell depletion.", "International journal of clinical and experimental pathology", "2015", "Bockenstedt MM, Boggiatto PM, Jones DE", "protein_xref_pubmed", "26261496", "protein_xref_refseq", "NP_031667" ], [ "Q9JM90-1", "Taking One Step Back in Familial Hypercholesterolemia: STAP1 Does Not Alter Plasma LDL (Low-Density Lipoprotein) Cholesterol in Mice and Humans.", "Arteriosclerosis, thrombosis, and vascular biology", "2020 Apr", "Loaiza N, Hartgers ML, Reeskamp LF, Balder JW, Rimbert A, Bazioti V, Wolters JC, Winkelmeijer M, Jansen HPG, Dallinga-Thie GM, Volta A, Huijkman N, Smit M, Kloosterhuis N, Koster M, Svendsen AF, van de Sluis B, Hovingh GK, Grefhorst A, Kuivenhoven JA", "protein_xref_pubmed", "31996024", "protein_xref_refseq", "NP_001297568" ], [ "Q9D6J5-1", "Reduced levels of mitochondrial complex I subunit NDUFB8 and linked complex I + III oxidoreductase activity in the TgCRND8 mouse model of Alzheimer's disease.", "Journal of Alzheimer's disease : JAD", "2014", "Francis BM, Yang J, Song BJ, Gupta S, Maj M, Bazinet RP, Robinson B, Mount HT", "protein_xref_pubmed", "24217272", "protein_xref_refseq", "NP_001334376" ], [ "Q8C3Q5-1", "Activity- and sleep-dependent regulation of tonic inhibition by Shisa7.", "Cell reports", "2021 Mar 23", "Wu K, Han W, Tian Q, Li Y, Lu W", "protein_xref_pubmed", "33761345", "protein_xref_refseq", "NP_001277220" ], [ "Q8R4I7-1", "Neto proteins regulate gating of the kainate-type glutamate receptor GluK2 through two binding sites.", "The Journal of biological chemistry", "2019 Nov 22", "Li YJ, Duan GF, Sun JH, Wu D, Ye C, Zang YY, Chen GQ, Shi YY, Wang J, Zhang W, Shi YS", "protein_xref_pubmed", "31628192", "protein_xref_refseq", "NP_659195" ], [ "Q6P542-1", "The role of the innate immune response regulatory gene ABCF1 in mammalian embryogenesis and development.", "PloS one", "2017", "Wilcox SM, Arora H, Munro L, Xin J, Fenninger F, Johnson LA, Pfeifer CG, Choi KB, Hou J, Hoodless PA, Jefferies WA", "protein_xref_pubmed", "28542262", "protein_xref_refseq", "NP_038882" ], [ "Q7TN31-1", "Receptor and Molecular Mechanism of AGGF1 Signaling in Endothelial Cell Functions and Angiogenesis.", "Arteriosclerosis, thrombosis, and vascular biology", "2021 Nov", "Wang J, Peng H, Timur AA, Pasupuleti V, Yao Y, Zhang T, You SA, Fan C, Yu Y, Jia X, Chen J, Xu C, Chen Q, Wang Q", "protein_xref_pubmed", "34551592", "protein_xref_refseq", "NP_079906" ], [ "P08228-1", "Deletion of Neuronal CuZnSOD Accelerates Age-Associated Muscle Mitochondria and Calcium Handling Dysfunction That Is Independent of Denervation and Precedes Sarcopenia.", "International journal of molecular sciences", "2021 Oct 4", "Su Y, Claflin DR, Huang M, Davis CS, Macpherson PCD, Richardson A, Van Remmen H, Brooks SV", "protein_xref_pubmed", "34639076", "protein_xref_refseq", "NP_035564" ], [ "Q8CCF0-1", "Identification of photoreceptor genes affected by PRPF31 mutations associated with autosomal dominant retinitis pigmentosa.", "Neurobiology of disease", "2007 May", "Mordes D, Yuan L, Xu L, Kawada M, Molday RS, Wu JY", "protein_xref_pubmed", "17350276", "protein_xref_refseq", "NP_001153186" ], [ "Q9D676-1", "Tissue-specific expression of Clec2g in mice.", "European journal of cell biology", "2006 May", "Katsu Y, Iguchi T", "protein_xref_pubmed", "16460835", "protein_xref_refseq", "NP_001303681" ], [ "Q9DBX2-1", "Glycosylated phosducin-like protein long regulates opioid receptor function in mouse brain.", "Neuropharmacology", "2002 May", "Garzon J, Rodriguez-Diaz M, Lopez-Fando A, Garcia-Espana A, Sanchez-Blazquez P", "protein_xref_pubmed", "12015208", "protein_xref_refseq", "NP_080452" ], [ "Q8BMF8-1", "Precise Spatiotemporal Control of Nodal Na(+) Channel Clustering by Bone Morphogenetic Protein-1/Tolloid-like Proteinases.", "Neuron", "2020 Jun 3", "Eshed-Eisenbach Y, Devaux J, Vainshtein A, Golani O, Lee SJ, Feinberg K, Sukhanov N, Greenspan DS, Susuki K, Rasband MN, Peles E", "protein_xref_pubmed", "32209430", "protein_xref_refseq", "NP_796324" ], [ "Q4U4S6-1", "XIRP2, an actin-binding protein essential for inner ear hair-cell stereocilia.", "Cell reports", "2015 Mar 24", "Scheffer DI, Zhang DS, Shen J, Indzhykulian A, Karavitaki KD, Xu YJ, Wang Q, Lin JJ, Chen ZY, Corey DP", "protein_xref_pubmed", "25772365", "protein_xref_refseq", "NP_001019789" ] ] }, "readme": "Name\n - Mouse Protein Citations (RefSeq)\n\nVersion\n - 1.11.2\n\nCreated on\n - 2019-09-06T14:06:38.962804\n\nModified on\n - 2022-01-19T12:33:03.804397\n\nCreated by\n - Jeet Vora [jeetvora@gwu.edu], Rahi Navelkar [rsn13@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Xavier Holmes [xavierh@email.gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Amanda Bell [amandab2140@gwu.edu], Jonathon Keeney [keeneyjg@gwu.edu], Millicent Quartey [mquartey@email.gwu.edu]\n\nAuthors\n - Not Applicable []\n\nChecksum\n - \n\nUsability Domain\n - The Mouse Protein Citations (RefSeq) datasets contains mouse [taxid:10090] UniProtKB accessions mapped to publication information (PMID, title, journal name, publication, date, authors of corresponding RefSeq accessions). The dataset is derived from NCBI RefSeq Release 96, September 9, 2019. If you use this dataset please provide proper attribution to NCBI RefSeq and GlyGen. \n\nDescription Domain\n Keywords\n - PMID\n - journal\n - citations\n - authors\n - RefSeq\n - PubMed\n\n Pipeline Steps\n - Step-1: The script parses the NCBI RefSeq gpff files to extract the publication information. The script also maps RefSeq accessions to the UniProtKB Canonical accessions. \n\nExecution Domain\n Scripts - https://github.com/GW-HIVE/glygen-backend-integration/blob/master/pipeline/integrator/make-protein-dataset.py\n\n\n Software Prerequisites\n Name: Python\n Version: 2.7.5\n URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n Input Subdomain\n Name: mouse_protein_blacklisted_pmids_uniprotkb.csv\n URI: https:/data.glygen.org/ln2releases/data/v-1.12.3/compiled/mouse_protein_blacklisted_pmids_uniprotkb.csv\n Name: mouse_protein_function_refseq.csv\n URI: https:/data.glygen.org/ln2releases/data/v-1.12.3/reviewed/mouse_protein_function_refseq.csv\n Name: mouse_protein_xref_refseq.csv\n URI: https:/data.glygen.org/ln2releases/data/v-1.12.3/reviewed/mouse_protein_xref_refseq.csv\n Output Subdomain\n Name: mouse_protein_citations_refseq.csv\n URI: https:/data.glygen.org/ln2releases/data/v-1.12.3/reviewed/mouse_protein_citations_refseq.csv\n Name: mouse_protein_citations_refseq.stat.csv\n URI: https:/data.glygen.org/ln2releases/data/v-1.12.3/reviewed/mouse_protein_citations_refseq.stat.csv\n\nFields\n Name: \"uniprotkb_canonical_ac\"\n Description: \"\"\n Unique Values: \"12249\"\n Name: \"title\"\n Description: \"Title of the published article in the journal\"\n Unique Values: \"31543\"\n Name: \"journal_name\"\n Description: \"The name of the journal in which the article is published\"\n Unique Values: \"1381\"\n Name: \"publication_date\"\n Description: \"Contains the full date on which the issue of the journal was published. Sourced from MEDLINE/PubMed data element(fields) description.\"\n Unique Values: \"4764\"\n Name: \"authors\"\n Description: \"NA\"\n Unique Values: \"31453\"\n Name: \"xref_key\"\n Description: \"Source key associated to the xref_id\"\n Unique Values: \"1\"\n Name: \"xref_id\"\n Description: \"ID of the X-ref\"\n Unique Values: \"31544\"\n Name: \"src_xref_key\"\n Description: \"Source Xref key\"\n Unique Values: \"1\"\n Name: \"src_xref_id\"\n Description: \"Source X-ref ID\"\n Unique Values: \"14258\"", "downloadurl": "/ln2data/releases/data/v-1.12.3/reviewed/mouse_protein_citations_refseq.csv" }