{ "bcoid": "GLY_000134", "title": "Mouse Protein Function (NCBI Refseq)", "description": "The Mouse Protein Function (NCBI RefSeq) dataset contains biological function annotation of mouse [taxid:10090] ...", "filename": "mouse_protein_function_refseq.csv", "filetype": "csv", "categories": { "species": "Mus musculus", "molecule": "Protein", "tags": "Protein Function", "file_type": "csv", "status": "Reviewed", "scope": "internal" }, "minitable": { "content": [ [ "Q99020-1...", "protein_xref..." ], [ "Q99020-1...", "protein_xref..." ] ], "headers": [ "uniprotkb_ca...", "xref_key..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "uniprotkb_canonical_ac" }, { "type": "string", "label": "xref_key" }, { "type": "string", "label": "xref_id" }, { "type": "string", "label": "evidence" }, { "type": "string", "label": "annotation" } ], [ "Q99020-1", "protein_xref_refseq", "NP_001041526", "", "This gene encodes a protein with consensus RNA binding domains present in a number of other RNA binding proteins and a glycine-rich C-terminus. This gene overlaps in a tail-to-tail orientation the gene encoding alanine-glyoxylate aminotransferase 2-like 2. Some of the exons of this gene are interspersed with exons of alanine-glyoxylate aminotransferase 2-like 2. Two alternatively spliced transcript variants that encode distinct proteins have been described for this gene. [provided by RefSeq, Jul 2008]." ], [ "Q99020-1", "protein_xref_refseq", "NP_001041526", "30314980", "Scrutinized the motility of Hnrnpab(-/-) cells and confirmed that the decreases in both cell motility and Eps8 are restored by ectopically coexpressing both alternatively spliced Hnrnpab isoforms, therefore these variants are surprisingly nonredundant for cell motility." ], [ "Q99020-1", "protein_xref_refseq", "NP_001041526", "12086581", "Structure and binding of CBF-A (AUF2)" ], [ "Q9JJI8-1", "protein_xref_refseq", "NP_001041522", "21529712", "Study identified mutations of the Ribosomal Protein L38 (Rpl38) gene in mice exhibiting surprising tissue-specific patterning defects, including pronounced homeotic transformations of the axial skeleton." ], [ "Q9JJI8-1", "protein_xref_refseq", "NP_001041522", "21062742", "Ectopic mineralization in the middle ear and chronic otitis media with effusion caused by RPL38 deficiency in the Tail-short (Ts) mouse." ], [ "O35453-1", "protein_xref_refseq", "NP_001263198", "", "This gene encodes a type II transmembrane serine protease that may function in diverse processes, including regulation of cell growth. Deficiency in this gene results in hearing loss. The protein is cleaved into a catalytic serine protease chain and a non-catalytic scavenger receptor cysteine-rich chain, which associate via a single disulfide bond. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Jan 2013]." ], [ "O35453-1", "protein_xref_refseq", "NP_001263198", "32404422", "Hepsin enhances liver metabolism and inhibits adipocyte browning in mice." ], [ "O35453-1", "protein_xref_refseq", "NP_001263198", "31444371", "Hepsin-mediated Processing of Uromodulin is Crucial for Salt-sensitivity and Thick Ascending Limb Homeostasis. Publication Status: Online-Only" ], [ "O35453-1", "protein_xref_refseq", "NP_001263198", "12962630", "Crystal structure of human hepsin, confirming cleavage and association of the two chains" ], [ "Q9DBU5-1", "protein_xref_refseq", "NP_001243014", "16204183", "Rnf6 controls cellular LIMK1 concentrations and indicate a new function for the ubiquitin/proteasome system in regulating local growth cone actin dynamics Erratum:[Genes Dev. 2005 Nov 1;19(21):2643]" ], [ "Q3UY90-1", "protein_xref_refseq", "NP_001186856", "30188967", "In mouse embryo fibroblasts (MEFs) obtained from cavin-1-/- or caveolin-1-/- mice, Fam198a precursor was retained in ER and no mature Fam198a could be formed in these cells." ], [ "P33434-1", "protein_xref_refseq", "NP_032636", "", "This gene encodes a member of the matrix metalloproteinase family of extracellular matrix-degrading enzymes that are involved in tissue remodeling, wound repair, progression of atherosclerosis and tumor invasion. The encoded preproprotein undergoes proteolytic processing to generate a mature, zinc-dependent endopeptidase enzyme that hydrolyzes collagens, gelatins, laminin, fibronectin and elastin. Mice lacking the encoded protein exhibit suppressed angiogenesis and attenuated features of human multicentric osteolysis with arthritis including abnormal skeletal and craniofacial development. [provided by RefSeq, Feb 2016]." ], [ "P33434-1", "protein_xref_refseq", "NP_032636", "34359839", "MMP2 Modulates Inflammatory Response during Axonal Regeneration in the Murine Visual System. Publication Status: Online-Only" ], [ "P33434-1", "protein_xref_refseq", "NP_032636", "34001241", "MMP-2 is a novel histone H3 N-terminal protease necessary for myogenic gene activation. Publication Status: Online-Only" ], [ "O70138-1", "protein_xref_refseq", "NP_032637", "", "This gene encodes a member of the matrix metalloproteinase family of extracellular matrix-degrading enzymes that are involved in tissue remodeling, wound repair, progression of atherosclerosis and tumor invasion. The encoded preproprotein undergoes proteolytic processing to generate a mature, zinc-dependent endopeptidase enzyme that degrades types I, II and III collagens. Mice lacking the encoded protein exhibit abnormalities in the inflammatory responses to various agents. This gene is located in a cluster of other matrix metalloproteinase genes on chromosome 9. [provided by RefSeq, Feb 2016]." ], [ "O70138-1", "protein_xref_refseq", "NP_032637", "34550870", "A Novel Protective Role for Matrix Metalloproteinase-8 in the Pulmonary Vasculature." ], [ "O70138-1", "protein_xref_refseq", "NP_032637", "32710469", "NPY promotes macrophage migration by upregulating matrix metalloproteinase-8 expression." ], [ "O70138-1", "protein_xref_refseq", "NP_032637", "32370054", "Endogenous Collagenases Regulate Osteoclast Fusion. Publication Status: Online-Only" ], [ "P53690-1", "protein_xref_refseq", "NP_032634", "", "This gene encodes a member of the matrix metalloproteinase family of extracellular matrix-degrading enzymes that are involved in tissue remodeling, wound repair, progression of atherosclerosis and tumor invasion. The encoded preproprotein undergoes proteolytic processing to generate a mature, zinc-dependent endopeptidase enzyme. Mice lacking the encoded protein exhibit craniofacial dysmorphism, arthritis, osteopenia, dwarfism, and fibrosis of soft tissues. [provided by RefSeq, Feb 2016]." ], [ "P53690-1", "protein_xref_refseq", "NP_032634", "34830157", "Extracellular Matrix Remodeling by Fibroblast-MMP14 Regulates Melanoma Growth. Publication Status: Online-Only" ], [ "P53690-1", "protein_xref_refseq", "NP_032634", "34048934", "Collagen denaturation in the infarcted myocardium involves temporally distinct effects of MT1-MMP-dependent proteolysis and mechanical tension." ], [ "P53690-1", "protein_xref_refseq", "NP_032634", "33805743", "Loss of MT1-MMP in Alveolar Epithelial Cells Exacerbates Pulmonary Fibrosis. Publication Status: Online-Only" ], [ "P53690-1", "protein_xref_refseq", "NP_032634", "33063665", "Macrophages promote endothelial-to-mesenchymal transition via MT1-MMP/TGFbeta1 after myocardial infarction. Publication Status: Online-Only" ], [ "O54732-1", "protein_xref_refseq", "NP_032635", "", "This gene encodes a member of the matrix metalloproteinase family of extracellular matrix-degrading enzymes that are involved in tissue remodeling, wound repair, progression of atherosclerosis and tumor invasion. The encoded preproprotein undergoes proteolytic processing to generate a mature, zinc-dependent endopeptidase enzyme. A deficiency of the encoded protein in mice is compatible with normal development and postnatal growth. [provided by RefSeq, Feb 2016]." ], [ "P33435-1", "protein_xref_refseq", "NP_032633", "", "This gene encodes a member of the matrix metalloproteinase family that plays a role in wound healing, skeletal development and bone remodeling. The encoded protein is activated by the removal of an N-terminal activation peptide to generate a zinc-dependent endopeptidase enzyme that can cleave various native collagens, including types I - IV, X and XIV. Mice lacking the encoded protein display profound defects in growth plate cartilage as well as a delay in the endochondral bone development. Lack of the encoded protein also impairs the wound healing process due to reduced keratinocyte migration and vascular density at the wound site. This gene is located in a cluster of other matrix metalloproteinase genes on chromosome 9. [provided by RefSeq, Jun 2015]." ], [ "P51949-1", "protein_xref_refseq", "NP_032638", "31421084", "MAT1 serves as a promoter in the lung metastasis of osteosarcoma through increasing AKT1 expression." ], [ "P51949-1", "protein_xref_refseq", "NP_032638", "21385826", "Deletion of the TFIIH kinase subunit Mat1 in mouse fibroblasts leads to dramatically reduced RNA polymerase II Ser5 phosphorylation." ], [ "P51949-1", "protein_xref_refseq", "NP_032638", "20231280", "Investigated the function of the Cdk7.cyclin H.Mat1 complex in murine embryonic stem (ES) cells and preimplantation embryos to determine whether it regulates the unique cell cycle structure and transcriptional network of pluripotent cells" ], [ "P51949-1", "protein_xref_refseq", "NP_032638", "17276355", "This study demonstrates a requirement for MAT1 in the operation of PGC-1 coactivators that control cell metabolism." ], [ "Q61884-1", "protein_xref_refseq", "NP_032639", "30129265", "Prenatal alcohol exposure Mns1(-/-) fetuses with severe eye defects also presented with craniofacial dysmorphologies characteristic of fetal alcohol syndrome and midline tissue loss in the brain, palate, and nasal septum" ], [ "Q61884-1", "protein_xref_refseq", "NP_032639", "30148830", "Compared to other embryonic tissues at this developmental stage, Mns1 expression is strongly enriched in the ventral node. Publication Status: Online-Only" ], [ "Q61884-1", "protein_xref_refseq", "NP_032639", "22396656", "These results demonstrate that MNS1 is essential for spermiogenesis, the assembly of sperm flagella, and motile ciliary functions. GeneRIF: MNS1 is an integral component of sperm flagella. Mice lacking MNS1 exhibit male sterility as evidenced by abnormal assembly of flagella. MNS1-deficient mice also display defects in left-right asymmetry patterning of internal organs and hydrocephalus." ], [ "Q920G9-1", "protein_xref_refseq", "NP_035948", "12927808", "MGCL-1 is a factor modulating MDM2-p53 axis by enhanced degradation of MDM2" ], [ "Q920G9-1", "protein_xref_refseq", "NP_035948", "12556490", "The mgcl-1 gene product appears to be essential for appropriate nuclear-lamina organization, which in turn is essential for normal sperm morphogenesis and chromatin remodeling." ], [ "Q920G9-1", "protein_xref_refseq", "NP_035948", "9878064", "Gmcl1 interacts with the DP component of the E2F transcription factor." ], [ "Q9WVR4-1", "protein_xref_refseq", "NP_035944", "28204491", "We discovered that FXR1P-deficient aNSCs have altered expression of a select number of cell-cycle genes, and we identified the mRNA of cyclin-dependent kinase inhibitor 1A (Cdkn1a, p21) as a direct target of FXR1P." ], [ "Q9WVR4-1", "protein_xref_refseq", "NP_035944", "11875043", "This protein shows high expression in brain and testis. The protein was tested in a behavioral test battery in knockout mice. The mice showed behavioral abnormalities." ], [ "Q9Z111-1", "protein_xref_refseq", "NP_035947", "32828305", "MicroRNA-128-1-5p attenuates myocardial ischemia/reperfusion injury by suppressing Gadd45g-mediated apoptotic signaling." ], [ "Q9Z111-1", "protein_xref_refseq", "NP_035947", "31826946", "Mimicking Age-Associated Gadd45gamma Dysregulation Results in Memory Impairments in Young Adult Mice." ], [ "Q9Z111-1", "protein_xref_refseq", "NP_035947", "30545945", "During fear learning, Gadd45gamma serves to act as a coordinator of immediate early gene expression and subsequent memory consolidation by directing temporally specific changes in active DNA demethylation at the promoter of plasticity-related immediate early genes Erratum:[J Neurosci. 2019 May 15;39(20):3993. PMID: 31092609]" ], [ "Q9WVH9-1", "protein_xref_refseq", "NP_035942", "33547906", "Upregulation of PTK7 and beta-catenin after vaginal mechanical dilatation: an examination of fibulin-5 knockout mice." ], [ "Q9WVH9-1", "protein_xref_refseq", "NP_035942", "34697337", "Role of fibulin-5 insufficiency and prolapse progression on murine vaginal biomechanical function. Publication Status: Online-Only" ], [ "Q9WVH9-1", "protein_xref_refseq", "NP_035942", "34274450", "PAD2-mediated citrullination of Fibulin-5 promotes elastogenesis." ], [ "Q9WVH9-1", "protein_xref_refseq", "NP_035942", "12021267", "FBLN-5 is a novel TGF-beta-inducible target gene that regulates cell growth and motility in a context-specific manner and affects protein kinase activation by TGF-beta." ], [ "Q9WVH9-1", "protein_xref_refseq", "NP_035942", "11805834", "Fibulin-5 is a calcium-dependent, elastin-binding protein that localizes to the surface of elastic fibres in vivo." ], [ "Q8BJW6-1", "protein_xref_refseq", "NP_001005509", "16717090", "Double-stranded RNA-dependent protein kinase phosphorylation of the alpha-subunit of eukaryotic translation initiation factor 2 mediates apoptosis" ], [ "P28301-1", "protein_xref_refseq", "NP_001273110", "", "This gene encodes a precursor protein that belongs to the lysyl oxidase family of proteins. The secreted proprotein is proteolytically processed to an active mature peptide and a propeptide. This propeptide is thought to function in tumor suppression by inhibiting the Ras signaling pathway. The active enzyme plays a role in cross-linking of collagen and elastin and is essential for development of cardiovascular and respiratory systems, and development of skin and connective tissue. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Oct 2013]." ], [ "P28301-1", "protein_xref_refseq", "NP_001273110", "34878944", "Lysyl oxidase regulation and protein aldehydes in the injured newborn lung." ], [ "P28301-1", "protein_xref_refseq", "NP_001273110", "34695437", "LOXG473A induces the formation of osteoclasts in RAW264.7 cells via IL-6/JAK2/STAT3 signaling." ], [ "P28301-1", "protein_xref_refseq", "NP_001273110", "34643880", "Progression and Regression of Abdominal Aortic Aneurysms in Mice." ], [ "P28301-1", "protein_xref_refseq", "NP_001273110", "15277520", "Lysyl oxidase functions to inhibit ras-dependent cell transformation" ], [ "Q6PAM1-1", "protein_xref_refseq", "NP_001005506", "32840323", "Testicular Lmcd1 regulates phagocytosis by Sertoli cells through modulation of NFAT1/Txlna signaling pathway." ], [ "Q6PAM1-1", "protein_xref_refseq", "NP_001005506", "26494466", "The TXLNA may serve as an important feedback mechanism to modulate the magnitude of subsequent phagocytotic process of SCs in response to testicular injury." ], [ "Q6PAM1-1", "protein_xref_refseq", "NP_001005506", "19663695", "Analysis of a novel monoclonal antibody against interleukin-14alpha" ], [ "Q6PAM1-1", "protein_xref_refseq", "NP_001005506", "19038581", "Transgenic mice in which IL-14a expression was increased constitutively develop all the clinical and immunological features of primary Sjogren's disease in the same relative time frame as patients with primary Sjogren's disease" ], [ "P34022-1", "protein_xref_refseq", "NP_035369", "25452572", "Ranbp1 emerges as a microcephaly gene within the 22q11.2 deleted region that may contribute to altered cortical precursor proliferation and neurogenesis associated with broader 22q11.2 deletion." ], [ "P34022-1", "protein_xref_refseq", "NP_035369", "24068924", "Data suggest Ran activation by RanBP1 in macrophages promotes Legionella phagosome formation and phagocytosis; LegG1 functions as bacterial Ran activator, localizes to phagosomes, and promotes microtubule stabilization, phagocytosis, and replication." ], [ "P34022-1", "protein_xref_refseq", "NP_035369", "21310149", "The dramatic decrease in 'RanBP' activity impairs germ cell viability and affects spermatogenesis decisively in RanBP1-knockout mice." ], [ "P53612-1", "protein_xref_refseq", "NP_035361", "18161010", "The function of chodl was investigated by searching for its protein interaction partners." ], [ "O55230-1", "protein_xref_refseq", "NP_035365", "", "This gene belongs to the Rad51 gene family whose products play a major role in homologous recombination and DNA repair. The encoded protein interacts with other proteins of this family, including Rad51b, Rad51c and Xrcc2, and plays an essential role in both DNA repair and telomere maintenance. In humans, germline mutations in this gene may be associated with predisposition to ovarian cancer. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, May 2013]." ], [ "O55230-1", "protein_xref_refseq", "NP_035365", "28945288", "The role of the RAD51D HR protein during thiopurine induction of mitotic catastrophe." ], [ "O55230-1", "protein_xref_refseq", "NP_035365", "27161866", "RNF138 is a newly identified regulatory component of the HR mediated DNA repair pathway that has implications toward understanding how ubiquitination modifies the functions of the RAD51 paralog protein complex" ], [ "O55230-1", "protein_xref_refseq", "NP_035365", "19327148", "Rad51d alternative splice variants potentially modulate mechanisms of homologous recombination by sequestering either RAD51C or XRCC2 Publication Status: Online-Only" ], [ "Q9Z0F6-1", "protein_xref_refseq", "NP_035367", "30154445", "RAD9A may also play an important role in maternal chromatin reprogramming. In summary, our data reveal an important role of RAD9A in zygotic chromatin reprogramming and female fertility." ], [ "Q9Z0F6-1", "protein_xref_refseq", "NP_035367", "27861152", "Rad9a is indispensable for spermatogonia differentiation and testicular development in mice." ], [ "Q9Z0F6-1", "protein_xref_refseq", "NP_035367", "14500360", "HRAD9 and Mrad9 are part of a gene family and reveal a new genetic element encoding a product that interacts with multiple, known cell cycle checkpoint control proteins." ], [ "P27005-1", "protein_xref_refseq", "NP_038678", "34743196", "DOK3 maintains intestinal homeostasis by suppressing JAK2/STAT3 signaling and S100a8/9 production in neutrophils. Publication Status: Online-Only" ], [ "P27005-1", "protein_xref_refseq", "NP_038678", "34412663", "S100A8/A9 is not essential for the development of inflammation and joint pathology in interleukin-1 receptor antagonist knockout mice. Publication Status: Online-Only" ], [ "P27005-1", "protein_xref_refseq", "NP_038678", "33717058", "Immune Resolution Dilemma: Host Antimicrobial Factor S100A8/A9 Modulates Inflammatory Collateral Tissue Damage During Disseminated Fungal Peritonitis. Publication Status: Online-Only" ], [ "P27005-1", "protein_xref_refseq", "NP_038678", "33389821", "S100A8 promotes epithelial-mesenchymal transition and metastasis under TGF-beta/USF2 axis in colorectal cancer." ], [ "P27005-1", "protein_xref_refseq", "NP_038678", "33530496", "Hypoxia-Induced S100A8 Expression Activates Microglial Inflammation and Promotes Neuronal Apoptosis. Publication Status: Online-Only" ], [ "P28563-1", "protein_xref_refseq", "NP_038670", "34944516", "The MAP Kinase Phosphatase MKP-1 Modulates Neurogenesis via Effects on BNIP3 and Autophagy. Publication Status: Online-Only" ], [ "P28563-1", "protein_xref_refseq", "NP_038670", "34234775", "Early p38 Activation Regulated by MKP-1 Is Determinant for High Levels of IL-10 Expression Through TLR2 Activation. Publication Status: Online-Only" ], [ "P28563-1", "protein_xref_refseq", "NP_038670", "34039638", "Knockout of MAPK Phosphatase-1 Exaggerates Type I IFN Response during Systemic Escherichia coli Infection." ], [ "P28563-1", "protein_xref_refseq", "NP_038670", "34034704", "Transcriptome analysis of potential candidate genes and molecular pathways in colitis-associated colorectal cancer of Mkp-1-deficient mice. Publication Status: Online-Only" ], [ "Q9JIK9-1", "protein_xref_refseq", "NP_075749", "25816300", "The Mrps34 mutation causes tissue-specific molecular changes that result in heterogeneous pathology involving alterations in fractional shortening of the heart and pronounced liver dysfunction that is exacerbated with age Publication Status: Online-Only" ], [ "O08788-1", "protein_xref_refseq", "NP_001185796", "33461576", "Schizophrenia-associated dysbindin modulates axonal mitochondrial movement in cooperation with p150(glued). Publication Status: Online-Only" ], [ "O08788-1", "protein_xref_refseq", "NP_001185796", "32210358", "The dynactin subunit DCTN1 controls osteoclastogenesis via the Cdc42/PAK2 pathway." ], [ "O35387-1", "protein_xref_refseq", "NP_001268961", "33600816", "Neuroprotective roles of HAX-1 in ischemic neuronal injury." ], [ "O35387-1", "protein_xref_refseq", "NP_001268961", "33741962", "Cerebellar Kv3.3 potassium channels activate TANK-binding kinase 1 to regulate trafficking of the cell survival protein Hax-1. Publication Status: Online-Only" ], [ "O35387-1", "protein_xref_refseq", "NP_001268961", "32079675", "Hepatic HAX-1 inactivation prevents metabolic diseases by enhancing mitochondrial activity and bile salt export." ], [ "O35387-1", "protein_xref_refseq", "NP_001268961", "29169992", "These findings reveal a role of HAX-1 in the regulation of oxidative stress and SERCA2a degradation." ], [ "Q9JK48-1", "protein_xref_refseq", "NP_001268966", "31243813", "Bif-1/Endophilin B1/SH3GLB1 regulates bone homeostasis." ], [ "Q9JK48-1", "protein_xref_refseq", "NP_001268966", "27715385", "SH3GLB1 controls nicotinic acetylcholine receptors endocytic trafficking in a phosphorylation- and RAB5-dependent manner at steps upstream of autophagosome formation." ] ] }, "readme": "Name\n - Mouse Protein Function (NCBI Refseq)\n\nVersion\n - 1.11.2\n\nCreated on\n - 2019-03-16T15:38:06.344586\n\nModified on\n - 2022-01-19T11:17:18.850708\n\nCreated by\n - Jeet Vora [jeetvora@gwu.edu], Rahi Navelkar [rsn13@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Xavier Holmes [xavierh@email.gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Amanda Bell [amandab2140@gwu.edu], Jonathon Keeney [keeneyjg@gwu.edu], Millicent Quartey [mquartey@email.gwu.edu]\n\nAuthors\n - Maria Martin [martin@ebi.ac.uk], Preethi Vasudev [pvasudev@ebi.ac.uk]\n\nChecksum\n - \n\nUsability Domain\n - The Mouse Protein Function (NCBI RefSeq) dataset contains biological function annotation of mouse [taxid:10090] genes from GeneRIF section in the NCBI RefSeq database. The dataset is derived from NCBI RefSeq Release 96, September 9, 2019. If you use this dataset please provide proper attribution to NCBI RefSeq and GlyGen. \n\nDescription Domain\n Keywords\n - protein function\n - NCBI RefSeq\n - geneRIF\n - PMID\n\n Pipeline Steps\n - Step-1: The script extract-from-gp.py extracts protein function information from NCBI RefSeq gpff format files and maps it to the UniProtKb canonical accessions for a final dataset output in a csv format. \n\nExecution Domain\n Scripts - https://github.com/glygener/glygen-backend-integration/blob/master/pipeline/extractor/extract-from-endpoint.py\n\n\n Software Prerequisites\n Name: Python\n Version: 2.7.5\n URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n Input Subdomain\n Name: mouse_protein_xref_refseq.csv\n URI: https:/data.glygen.org/ln2releases/data/v-1.12.3/reviewed/mouse_protein_xref_refseq.csv\n Name: refseq_protein_all_10090.gpff\n URI: https:/data.glygen.org/ln2downloads/ncbi/refseq/2022_02/refseq_protein_all_10090.gpff\n Output Subdomain\n Name: mouse_protein_function_refseq.csv\n URI: https:/data.glygen.org/ln2releases/data/v-1.12.3/reviewed/mouse_protein_function_refseq.csv\n Name: mouse_protein_function_refseq.stat.csv\n URI: https:/data.glygen.org/ln2releases/data/v-1.12.3/reviewed/mouse_protein_function_refseq.stat.csv\n\nFields\n Name: \"uniprotkb_canonical_ac\"\n Description: \"\"\n Unique Values: \"13519\"\n Name: \"xref_key\"\n Description: \"Source key associated to the xref_id\"\n Unique Values: \"1\"\n Name: \"xref_id\"\n Description: \"ID of the X-ref\"\n Unique Values: \"15556\"\n Name: \"evidence\"\n Description: \"NCBI PubMed Id (PMID) or DOI (Digital Object Identifier) as evidence for the entry/annotation\"\n Unique Values: \"31547\"\n Name: \"annotation\"\n Description: \"Function annotation from UniProtKB|RefSeq database\"\n Unique Values: \"33385\"", "downloadurl": "/ln2data/releases/data/v-1.12.3/reviewed/mouse_protein_function_refseq.csv" }