{ "bcoid": "GLY_000590", "title": "Mouse Reaction Participants (Reactome)", "description": "", "filename": "mouse_protein_participants_reactome.csv", "filetype": "csv", "categories": { "species": "Mus musculus", "molecule": "Protein", "tags": "Reaction Participants (Reactome)", "file_type": "csv", "status": "Reviewed", "scope": "internal" }, "minitable": { "content": [ [ "R-MMU-681374...", "R-ALL-679949..." ], [ "R-MMU-681374...", "R-ALL-679949..." ] ], "headers": [ "reaction_id...", "participant_..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "reaction_id" }, { "type": "string", "label": "participant_id" }, { "type": "string", "label": "participant_name" }, { "type": "string", "label": "role" }, { "type": "string", "label": "xref_id" }, { "type": "string", "label": "xref_type" } ], [ "R-MMU-6813749", "R-ALL-6799497", "DGA [cytosol]", "output", "C00258", "COMPOUND" ], [ "R-MMU-6813749", "R-ALL-6799497", "DGA [cytosol]", "output", "32398", "ChEBI" ], [ "R-MMU-6813749", "R-ALL-6799497", "DGA [cytosol]", "output", "HMDB0000139", "HMDB Metabolite" ], [ "R-MMU-5619418", "R-MMU-5619355", "Hoxa2 gene [nucleoplasm]", "input", "ENSMUSG00000014704", "ENSEMBL" ], [ "R-MMU-5619419", "R-MMU-5619381", "Hoxd3 gene [nucleoplasm]", "input", "ENSMUSG00000079277", "ENSEMBL" ], [ "R-MMU-6797630", "R-ALL-417891", "LPA [extracellular region]", "input", "52288", "ChEBI" ], [ "R-MMU-6797630", "R-ALL-109276", "H2O [extracellular region]", "input", "15377", "ChEBI" ], [ "R-MMU-6797630", "R-ALL-109276", "H2O [extracellular region]", "input", "8145132", "PubChem Substance" ], [ "R-MMU-6797630", "R-ALL-109276", "H2O [extracellular region]", "input", "HMDB0002111", "HMDB Metabolite" ], [ "R-MMU-6797630", "R-ALL-109276", "H2O [extracellular region]", "input", "C00001", "COMPOUND" ], [ "R-MMU-6797630", "R-ALL-109277", "Pi [extracellular region]", "output", "C00009", "COMPOUND" ], [ "R-MMU-6797630", "R-ALL-109277", "Pi [extracellular region]", "output", "43474", "ChEBI" ], [ "R-MMU-6797630", "R-ALL-6797635", "1,2-DAG [extracellular region]", "output", "17815", "ChEBI" ], [ "R-MMU-6813740", "R-ALL-6813734", "GroPIns [cytosol]", "input", "58444", "ChEBI" ], [ "R-MMU-5619417", "R-MMU-5619373", "Hoxb4 gene [nucleoplasm]", "input", "ENSMUSG00000038692", "ENSEMBL" ], [ "R-MMU-5619417", "R-MMU-5619409", "Hoxb4 mRNA [cytosol]", "output", "ENSMUST00000049241", "ENSEMBL" ], [ "R-MMU-5619414", "R-MMU-5619361", "Hoxa4 gene [nucleoplasm]", "input", "ENSMUSG00000000942", "ENSEMBL" ], [ "R-MMU-5619415", "R-MMU-5619369", "Hoxd4 mRNA [cytosol]", "input", "ENSMUST00000111980", "ENSEMBL" ], [ "R-MMU-5619415", "R-MMU-5619400", "Hoxd4 [nucleoplasm]", "output", "P10628", "PRO" ], [ "R-MMU-5619415", "R-MMU-5619400", "Hoxd4 [nucleoplasm]", "output", "P10628", "UniProt" ], [ "R-MMU-5619415", "R-MMU-5619400", "Hoxd4 [nucleoplasm]", "output", "ENSMUSP00000047949", "Ensembl" ], [ "R-MMU-5619415", "R-MMU-5619400", "Hoxd4 [nucleoplasm]", "output", "NP_034599.2", "RefSeq" ], [ "R-MMU-5619415", "R-MMU-5619400", "Hoxd4 [nucleoplasm]", "output", "ENSMUSP00000107611", "Ensembl" ], [ "R-MMU-5619415", "R-MMU-5619400", "Hoxd4 [nucleoplasm]", "output", "96208", "MGI" ], [ "R-MMU-5619415", "R-MMU-5619400", "Hoxd4 [nucleoplasm]", "output", "ENSMUSG00000101174", "Ensembl" ], [ "R-MMU-5619415", "R-MMU-5619400", "Hoxd4 [nucleoplasm]", "output", "ENSMUST00000111980", "Ensembl" ], [ "R-MMU-5619415", "R-MMU-5619400", "Hoxd4 [nucleoplasm]", "output", "ENSMUST00000047904", "Ensembl" ], [ "R-MMU-9701524", "R-MMU-539044", "Stat3 [cytosol]", "input", "P42227", "UniProt" ], [ "R-MMU-9701524", "R-MMU-539044", "Stat3 [cytosol]", "input", "ENSMUST00000103114", "Ensembl" ], [ "R-MMU-9701524", "R-MMU-539044", "Stat3 [cytosol]", "input", "4E68", "PDB" ], [ "R-MMU-9701524", "R-MMU-539044", "Stat3 [cytosol]", "input", "NP_998825.1", "RefSeq" ], [ "R-MMU-9701524", "R-MMU-539044", "Stat3 [cytosol]", "input", "ENSMUSP00000090342", "Ensembl" ], [ "R-MMU-9701524", "R-MMU-539044", "Stat3 [cytosol]", "input", "ENSMUST00000092671", "Ensembl" ], [ "R-MMU-9701524", "R-MMU-539044", "Stat3 [cytosol]", "input", "ENSMUSP00000120152", "Ensembl" ], [ "R-MMU-9701524", "R-MMU-539044", "Stat3 [cytosol]", "input", "ENSMUSG00000004040", "Ensembl" ], [ "R-MMU-9701524", "R-MMU-539044", "Stat3 [cytosol]", "input", "P42227", "PRO" ], [ "R-MMU-9701524", "R-MMU-539044", "Stat3 [cytosol]", "input", "103038", "MGI" ], [ "R-MMU-9701524", "R-MMU-539044", "Stat3 [cytosol]", "input", "STAT3_MOUSE", "ZINC - 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Mouse Reaction Participants (Reactome)\n\nVersion\n - 1.11.2\n\nCreated on\n - 2021-10-07T14:15:48.605914\n\nModified on\n - 2021-10-07T14:20:42.507357\n\nCreated by\n - [jeetvora@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Amanda Bell [amandab2140@gwu.edu], Jonathon Keeney [keeneyjg@gwu.edu], Millicent Quartey [mquartey@email.gwu.edu]\n\nAuthors\n - \n\nChecksum\n - \n\nExecution Domain\n Scripts\n\n Software Prerequisites\n\nI/O Domain\n Input Subdomain\n Name: database_accession.tsv\n URI: https:/data.glygen.org/ln2downloads/chebi/07_16_2021/database_accession.tsv\n Name: uniprot-proteome-mus-musculus.nt\n URI: https:/data.glygen.org/ln2downloads/ebi/2021_04/uniprot-proteome-mus-musculus.nt\n Output Subdomain\n Name: mouse_protein_participants_reactome.csv\n URI: https:/data.glygen.org/ln2releases/data/v-1.12.3/reviewed/mouse_protein_participants_reactome.csv\n Name: mouse_protein_participants_reactome.stat.csv\n URI: https:/data.glygen.org/ln2releases/data/v-1.12.3/reviewed/mouse_protein_participants_reactome.stat.csv\n\nFields\n Name: \"reaction_id\"\n Description: \"The identifier assigned to a reaction in Reactome database\"\n Unique Values: \"6792\"\n Name: \"participant_id\"\n Description: \"\"\n Unique Values: \"6744\"\n Name: \"participant_name\"\n Description: \"\"\n Unique Values: \"3457\"\n Name: \"role\"\n Description: \"\"\n Unique Values: \"3\"\n Name: \"xref_id\"\n Description: \"ID of the X-ref\"\n Unique Values: \"13447\"\n Name: \"xref_type\"\n Description: \"\"\n Unique Values: \"43\"", "downloadurl": "/ln2data/releases/data/v-1.12.3/reviewed/mouse_protein_participants_reactome.csv" }