{
    "bcoid": "GLY_000516",
    "title": "Human Proteoform Citations (Literature Mining)",
    "description": "The dataset provides citation details corresponding to the PubMed ID (PMID) from file https://data.glygen.org/GLYDS000481. ...",
    "filename": "human_proteoform_citations_glycosylation_literature_mining.csv",
    "filetype": "csv",
    "categories": {
        "species": "Homo sapiens",
        "molecule": "Proteoform",
        "tags": "Protein Citations",
        "file_type": "csv",
        "status": "Reviewed",
        "scope": "internal"
    },
    "minitable": {
        "content": [
            [
                "O00300-1...",
                "Deletion of ..."
            ],
            [
                "O00555-8...",
                "Stroke-Like ..."
            ]
        ],
        "headers": [
            "uniprotkb_ca...",
            "title..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "uniprotkb_canonical_ac"
                },
                {
                    "type": "string",
                    "label": "title"
                },
                {
                    "type": "string",
                    "label": "journal_name"
                },
                {
                    "type": "string",
                    "label": "publication_date"
                },
                {
                    "type": "string",
                    "label": "authors"
                },
                {
                    "type": "string",
                    "label": "xref_key"
                },
                {
                    "type": "string",
                    "label": "xref_id"
                },
                {
                    "type": "string",
                    "label": "src_xref_key"
                },
                {
                    "type": "string",
                    "label": "src_xref_id"
                },
                {
                    "type": "string",
                    "label": "glytoucan_ac"
                }
            ],
            [
                "O00300-1",
                "Deletion of aspartate 182 in OPG causes juvenile Paget's disease by impairing both protein secretion and binding to RANKL.",
                "Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research",
                "2006 Mar",
                "Middleton-Hardie C, Zhu Q, Cundy H, Lin JM, Callon K, Tong PC, Xu J, Grey A, Cornish J, Naot D",
                "protein_xref_pubmed",
                "16491292",
                "protein_xref_automatic_literature_mining",
                "16491292",
                ""
            ],
            [
                "O00555-8",
                "Stroke-Like Episodes and Cerebellar Syndrome in Phosphomannomutase Deficiency (PMM2-CDG): Evidence for Hypoglycosylation-Driven Channelopathy.",
                "International journal of molecular sciences",
                "2018 Feb 22",
                "Izquierdo-Serra M, Martinez-Monseny AF, Lopez L, Carrillo-Garcia J, Edo A, Ortigoza-Escobar JD, Garcia O, Cancho-Candela R, Carrasco-Marina ML, Gutierrez-Solana LG, Cuadras D, Muchart J, Montero R, Artuch R, Perez-Cerda C, Perez B, Perez-Duenas B, Macaya A, Fernandez-Fernandez JM, Serrano M",
                "protein_xref_pubmed",
                "29470411",
                "protein_xref_automatic_literature_mining",
                "29470411",
                ""
            ],
            [
                "O14672-1",
                "Functional role of N-glycosylation from ADAM10 in processing, localization and activity of the enzyme.",
                "Biochimica et biophysica acta",
                "2008 Jun",
                "Escrevente C, Morais VA, Keller S, Soares CM, Altevogt P, Costa J",
                "protein_xref_pubmed",
                "18381078",
                "protein_xref_automatic_literature_mining",
                "18381078",
                ""
            ],
            [
                "O14773-1",
                "N-glycosylation is crucial for folding, trafficking, and stability of human tripeptidyl-peptidase I.",
                "The Journal of biological chemistry",
                "2004 Mar 26",
                "Wujek P, Kida E, Walus M, Wisniewski KE, Golabek AA",
                "protein_xref_pubmed",
                "14702339",
                "protein_xref_automatic_literature_mining",
                "14702339",
                ""
            ],
            [
                "O14786-1",
                "A Novel Physiological Glycosaminoglycan-Deficient Splice Variant of Neuropilin-1 Is Anti-Tumorigenic In Vitro and In Vivo.",
                "PloS one",
                "2016",
                "Hendricks C, Dubail J, Brohee L, Delforge Y, Colige A, Deroanne C",
                "protein_xref_pubmed",
                "27798666",
                "protein_xref_automatic_literature_mining",
                "27798666",
                ""
            ],
            [
                "O15431-1",
                "O-linked glycosylation at threonine 27 protects the copper transporter hCTR1 from proteolytic cleavage in mammalian cells.",
                "The Journal of biological chemistry",
                "2007 Jul 13",
                "Maryon EB, Molloy SA, Kaplan JH",
                "protein_xref_pubmed",
                "17525160",
                "protein_xref_automatic_literature_mining",
                "17525160",
                ""
            ],
            [
                "O15431-1",
                "Human copper transporter 1 lacking O-linked glycosylation is proteolytically cleaved in a Rab9-positive endosomal compartment.",
                "The Journal of biological chemistry",
                "2009 Oct 9",
                "Maryon EB, Zhang J, Jellison JW, Kaplan JH",
                "protein_xref_pubmed",
                "19684018",
                "protein_xref_automatic_literature_mining",
                "19684018",
                ""
            ],
            [
                "O43490-1",
                "Mutation of N-linked glycosylation at Asn548 in CD133 decreases its ability to promote hepatoma cell growth.",
                "Oncotarget",
                "2015 Aug 21",
                "Liu Y, Ren S, Xie L, Cui C, Xing Y, Liu C, Cao B, Yang F, Li Y, Chen X, Wei Y, Lu H, Jiang J",
                "protein_xref_pubmed",
                "26029999",
                "protein_xref_automatic_literature_mining",
                "26029999",
                ""
            ],
            [
                "O60911-1",
                "Determination of cathepsin V activity and intracellular trafficking by N-glycosylation.",
                "FEBS letters",
                "2012 Oct 19",
                "Niwa Y, Suzuki T, Dohmae N, Umezawa K, Simizu S",
                "protein_xref_pubmed",
                "22967898",
                "protein_xref_automatic_literature_mining",
                "22967898",
                ""
            ],
            [
                "O75355-1",
                "Asparagine 81, an invariant glycosylation site near apyrase conserved region 1, is essential for full enzymatic activity of ecto-nucleoside triphosphate diphosphohydrolase 3.",
                "Archives of biochemistry and biophysics",
                "2003 May 1",
                "Murphy DM, Kirley TL",
                "protein_xref_pubmed",
                "12706347",
                "protein_xref_automatic_literature_mining",
                "12706347",
                ""
            ],
            [
                "O75355-1",
                "Conserved lysine 79 is important for activity of ecto-nucleoside triphosphate diphosphohydrolase 3 (NTPDase3).",
                "Purinergic signalling",
                "2004 Dec",
                "Basu S, Murphy-Piedmonte DM, Kirley TL",
                "protein_xref_pubmed",
                "18404400",
                "protein_xref_automatic_literature_mining",
                "18404400",
                ""
            ],
            [
                "O95255-1",
                "Subcellular localization and N-glycosylation of human ABCC6, expressed in MDCKII cells.",
                "Biochemical and biophysical research communications",
                "2003 Aug 22",
                "Sinko E, Ilias A, Ujhelly O, Homolya L, Scheffer GL, Bergen AA, Sarkadi B, Varadi A",
                "protein_xref_pubmed",
                "12901863",
                "protein_xref_automatic_literature_mining",
                "12901863",
                ""
            ],
            [
                "O95445-1",
                "Proposed lipocalin fold for apolipoprotein M based on bioinformatics and site-directed mutagenesis.",
                "FEBS letters",
                "2001 Jun 15",
                "Duan J, Dahlback B, Villoutreix BO",
                "protein_xref_pubmed",
                "11418126",
                "protein_xref_automatic_literature_mining",
                "11418126",
                ""
            ],
            [
                "O95832-1",
                "Claudin-1 required for HCV virus entry has high potential for phosphorylation and O-glycosylation.",
                "Virology journal",
                "2011 May 15",
                "Ahmad W, Shabbiri K, Ijaz B, Asad S, Sarwar MT, Gull S, Kausar H, Fouzia K, Shahid I, Hassan S",
                "protein_xref_pubmed",
                "21569618",
                "protein_xref_automatic_literature_mining",
                "21569618",
                ""
            ],
            [
                "O95980-1",
                "RECK-mediated suppression of tumor cell invasion is regulated by glycosylation in human tumor cell lines.",
                "Cancer research",
                "2005 Aug 15",
                "Simizu S, Takagi S, Tamura Y, Osada H",
                "protein_xref_pubmed",
                "16103099",
                "protein_xref_automatic_literature_mining",
                "16103099",
                ""
            ],
            [
                "P00450-1",
                "Quantitative analysis of core fucosylation of serum proteins in liver diseases by LC-MS-MRM.",
                "Journal of proteomics",
                "2018 Oct 30",
                "Ma J, Sanda M, Wei R, Zhang L, Goldman R",
                "protein_xref_pubmed",
                "29427759",
                "protein_xref_automatic_literature_mining",
                "29427759",
                ""
            ],
            [
                "P00738-1",
                "Glycosylation status of haptoglobin in sera of patients with prostate cancer vs. benign prostate disease or normal subjects.",
                "International journal of cancer",
                "2008 Jan 1",
                "Fujimura T, Shinohara Y, Tissot B, Pang PC, Kurogochi M, Saito S, Arai Y, Sadilek M, Murayama K, Dell A, Nishimura S, Hakomori SI",
                "protein_xref_pubmed",
                "17803183",
                "protein_xref_automatic_literature_mining",
                "17803183",
                ""
            ],
            [
                "P00738-1",
                "Site-specific analysis of N-glycans on haptoglobin in sera of patients with pancreatic cancer: a novel approach for the development of tumor markers.",
                "International journal of cancer",
                "2008 May 15",
                "Nakano M, Nakagawa T, Ito T, Kitada T, Hijioka T, Kasahara A, Tajiri M, Wada Y, Taniguchi N, Miyoshi E",
                "protein_xref_pubmed",
                "18214858",
                "protein_xref_automatic_literature_mining",
                "18214858",
                ""
            ],
            [
                "P00738-1",
                "Glycoproteomic analysis and molecular modeling of haptoglobin multimers.",
                "Electrophoresis",
                "2011 Jun",
                "Boonyapranai K, Tsai HY, Chen MC, Sriyam S, Sinchaikul S, Phutrakul S, Chen ST",
                "protein_xref_pubmed",
                "21692080",
                "protein_xref_automatic_literature_mining",
                "21692080",
                ""
            ],
            [
                "P00738-1",
                "alpha1-3/4 fucosylation at Asn 241 of beta-haptoglobin is a novel marker for colon cancer: a combinatorial approach for development of glycan biomarkers.",
                "International journal of cancer",
                "2012 May 15",
                "Park SY, Lee SH, Kawasaki N, Itoh S, Kang K, Hee Ryu S, Hashii N, Kim JM, Kim JY, Hoe Kim J",
                "protein_xref_pubmed",
                "21780104",
                "protein_xref_automatic_literature_mining",
                "21780104",
                ""
            ],
            [
                "P00738-1",
                "Site-specific and linkage analyses of fucosylated N-glycans on haptoglobin in sera of patients with various types of cancer: possible implication for the differential diagnosis of cancer.",
                "Glycoconjugate journal",
                "2016 Jun",
                "Takahashi S, Sugiyama T, Shimomura M, Kamada Y, Fujita K, Nonomura N, Miyoshi E, Nakano M",
                "protein_xref_pubmed",
                "26869352",
                "protein_xref_automatic_literature_mining",
                "26869352",
                ""
            ],
            [
                "P00738-1",
                "Characteristic glycopeptides associated with extreme human longevity identified through plasma glycoproteomics.",
                "Biochimica et biophysica acta. General subjects",
                "2018 Jun",
                "Miura Y, Hashii N, Ohta Y, Itakura Y, Tsumoto H, Suzuki J, Takakura D, Abe Y, Arai Y, Toyoda M, Kawasaki N, Hirose N, Endo T",
                "protein_xref_pubmed",
                "29580922",
                "protein_xref_automatic_literature_mining",
                "29580922",
                ""
            ],
            [
                "P00742-1",
                "The missense Thr211Pro mutation in the factor X activation peptide of a bleeding patient causes molecular defect in the clotting cascade.",
                "Thrombosis and haemostasis",
                "2013 Jul",
                "Ding Q, Shen Y, Yang L, Wang X, Rezaie AR",
                "protein_xref_pubmed",
                "23677006",
                "protein_xref_automatic_literature_mining",
                "23677006",
                ""
            ],
            [
                "P01009-1",
                "Comprehensive glyco-proteomic analysis of human alpha1-antitrypsin and its charge isoforms.",
                "Proteomics",
                "2006 Jun",
                "Kolarich D, Weber A, Turecek PL, Schwarz HP, Altmann F",
                "protein_xref_pubmed",
                "16622833",
                "protein_xref_automatic_literature_mining",
                "16622833",
                ""
            ],
            [
                "P01009-1",
                "The analysis of alpha-1-antitrypsin glycosylation with direct LC-MS/MS.",
                "Electrophoresis",
                "2018 Sep",
                "Yin H, An M, So PK, Wong MY, Lubman DM, Yao Z",
                "protein_xref_pubmed",
                "29405331",
                "protein_xref_automatic_literature_mining",
                "29405331",
                ""
            ],
            [
                "P01009-1",
                "Quantitative analysis of core fucosylation of serum proteins in liver diseases by LC-MS-MRM.",
                "Journal of proteomics",
                "2018 Oct 30",
                "Ma J, Sanda M, Wei R, Zhang L, Goldman R",
                "protein_xref_pubmed",
                "29427759",
                "protein_xref_automatic_literature_mining",
                "29427759",
                ""
            ],
            [
                "P01106-1",
                "c-Myc is glycosylated at threonine 58, a known phosphorylation site and a mutational hot spot in lymphomas.",
                "The Journal of biological chemistry",
                "1995 Aug 11",
                "Chou TY, Hart GW, Dang CV",
                "protein_xref_pubmed",
                "7642555",
                "protein_xref_automatic_literature_mining",
                "7642555",
                ""
            ],
            [
                "P01106-1",
                "Dynamic interplay between O-glycosylation and O-phosphorylation of nucleocytoplasmic proteins: alternative glycosylation/phosphorylation of THR-58, a known mutational hot spot of c-Myc in lymphomas, is regulated by mitogens.",
                "The Journal of biological chemistry",
                "2002 May 24",
                "Kamemura K, Hayes BK, Comer FI, Hart GW",
                "protein_xref_pubmed",
                "11904304",
                "protein_xref_automatic_literature_mining",
                "11904304",
                ""
            ],
            [
                "P01591-1",
                "Quantitative analysis of core fucosylation of serum proteins in liver diseases by LC-MS-MRM.",
                "Journal of proteomics",
                "2018 Oct 30",
                "Ma J, Sanda M, Wei R, Zhang L, Goldman R",
                "protein_xref_pubmed",
                "29427759",
                "protein_xref_automatic_literature_mining",
                "29427759",
                ""
            ],
            [
                "P01854-1",
                "Structure and function of IgE myeloma protein VL from an atopic patient.",
                "International archives of allergy and immunology",
                "1996 Jun",
                "Zavazal V, Krauz V, Kratzin H, Hilschmann N",
                "protein_xref_pubmed",
                "8645991",
                "protein_xref_automatic_literature_mining",
                "8645991",
                ""
            ],
            [
                "P01876-1",
                "The glycosylation and structure of human serum IgA1, Fab, and Fc regions and the role of N-glycosylation on Fcalpha receptor interactions.",
                "The Journal of biological chemistry",
                "1998 Jan 23",
                "Mattu TS, Pleass RJ, Willis AC, Kilian M, Wormald MR, Lellouch AC, Rudd PM, Woof JM, Dwek RA",
                "protein_xref_pubmed",
                "9442070",
                "protein_xref_automatic_literature_mining",
                "9442070",
                ""
            ],
            [
                "P02730-1",
                "Calnexin interaction with N-glycosylation mutants of a polytopic membrane glycoprotein, the human erythrocyte anion exchanger 1 (band 3).",
                "The Journal of biological chemistry",
                "1999 Jun 18",
                "Popov M, Reithmeier RA",
                "protein_xref_pubmed",
                "10364201",
                "protein_xref_automatic_literature_mining",
                "10364201",
                ""
            ],
            [
                "P02730-1",
                "Topology studies with biosynthetic fragments identify interacting transmembrane regions of the human red-cell anion exchanger (band 3; AE1).",
                "The Biochemical journal",
                "1999 Dec 15",
                "Groves JD, Tanner MJ",
                "protein_xref_pubmed",
                "10585855",
                "protein_xref_automatic_literature_mining",
                "10585855",
                ""
            ],
            [
                "P02730-1",
                "Processing of N-linked oligosaccharide depends on its location in the anion exchanger, AE1, membrane glycoprotein.",
                "The Biochemical journal",
                "2000 Jul 1",
                "Li J, Quilty J, Popov M, Reithmeier RA",
                "protein_xref_pubmed",
                "10861210",
                "protein_xref_automatic_literature_mining",
                "10861210",
                ""
            ],
            [
                "P02730-1",
                "Topology of the anion exchange protein AE1: the controversial sidedness of lysine 743.",
                "Biochemistry",
                "2002 Mar 12",
                "Kuma H, Shinde AA, Howren TR, Jennings ML",
                "protein_xref_pubmed",
                "11876646",
                "protein_xref_automatic_literature_mining",
                "11876646",
                ""
            ],
            [
                "P02730-1",
                "Membrane integration and topology of the first transmembrane segment in normal and Southeast Asian ovalocytosis human erythrocyte anion exchanger 1.",
                "Molecular membrane biology",
                "2005 May-Jun",
                "Cheung JC, Reithmeier RA",
                "protein_xref_pubmed",
                "16096263",
                "protein_xref_automatic_literature_mining",
                "16096263",
                ""
            ],
            [
                "P02786-1",
                "The critical glycosylation site of human transferrin receptor contains a high-mannose oligosaccharide.",
                "Glycobiology",
                "1995 Mar",
                "Hayes GR, Williams A, Costello CE, Enns CA, Lucas JJ",
                "protein_xref_pubmed",
                "7780197",
                "protein_xref_automatic_literature_mining",
                "7780197",
                ""
            ],
            [
                "P02786-1",
                "Structure of human transferrin receptor oligosaccharides: conservation of site-specific processing.",
                "Biochemistry",
                "1997 Apr 29",
                "Hayes GR, Williams AM, Lucas JJ, Enns CA",
                "protein_xref_pubmed",
                "9136890",
                "protein_xref_automatic_literature_mining",
                "9136890",
                ""
            ],
            [
                "P02786-1",
                "Effect of glycosylation on the function of a soluble, recombinant form of the transferrin receptor.",
                "Biochemistry",
                "2006 May 30",
                "Byrne SL, Leverence R, Klein JS, Giannetti AM, Smith VC, MacGillivray RT, Kaltashov IA, Mason AB",
                "protein_xref_pubmed",
                "16716077",
                "protein_xref_automatic_literature_mining",
                "16716077",
                ""
            ],
            [
                "P02786-1",
                "Identification of the O-linked glycosylation site of the human transferrin receptor.",
                "Glycobiology",
                "1992 Aug",
                "Hayes GR, Enns CA, Lucas JJ",
                "protein_xref_pubmed",
                "1421757",
                "protein_xref_automatic_literature_mining",
                "1421757",
                ""
            ],
            [
                "P02787-1",
                "N-glycosylation at Asn(491) in the Asn-Xaa-Cys motif of human transferrin.",
                "FEBS letters",
                "2004 Oct 8",
                "Satomi Y, Shimonishi Y, Takao T",
                "protein_xref_pubmed",
                "15474009",
                "protein_xref_automatic_literature_mining",
                "15474009",
                ""
            ],
            [
                "P02787-1",
                "Site-specific carbohydrate profiling of human transferrin by nano-flow liquid chromatography/electrospray ionization mass spectrometry.",
                "Rapid communications in mass spectrometry : RCM",
                "2004",
                "Satomi Y, Shimonishi Y, Hase T, Takao T",
                "protein_xref_pubmed",
                "15536627",
                "protein_xref_automatic_literature_mining",
                "15536627",
                ""
            ],
            [
                "P02787-1",
                "Structural change of N-glycan exposes hydrophobic surface of human transferrin.",
                "Glycobiology",
                "2014 Aug",
                "Nagae M, Morita-Matsumoto K, Arai S, Wada I, Matsumoto Y, Saito K, Hashimoto Y, Yamaguchi Y",
                "protein_xref_pubmed",
                "24780636",
                "protein_xref_automatic_literature_mining",
                "24780636",
                ""
            ],
            [
                "P02787-1",
                "In situ visualization of a glycoform of transferrin: localization of alpha2,6-sialylated transferrin in the liver.",
                "Journal of biochemistry",
                "2015 Apr",
                "Matsumoto Y, Saito T, Hoshi K, Ito H, Kariya Y, Nagae M, Yamaguchi Y, Hagiwara Y, Kinoshita N, Wada I, Saito K, Honda T, Hashimoto Y",
                "protein_xref_pubmed",
                "25425657",
                "protein_xref_automatic_literature_mining",
                "25425657",
                ""
            ],
            [
                "P02787-1",
                "Quantitative analysis of core fucosylation of serum proteins in liver diseases by LC-MS-MRM.",
                "Journal of proteomics",
                "2018 Oct 30",
                "Ma J, Sanda M, Wei R, Zhang L, Goldman R",
                "protein_xref_pubmed",
                "29427759",
                "protein_xref_automatic_literature_mining",
                "29427759",
                ""
            ],
            [
                "P02790-1",
                "Quantitative analysis of core fucosylation of serum proteins in liver diseases by LC-MS-MRM.",
                "Journal of proteomics",
                "2018 Oct 30",
                "Ma J, Sanda M, Wei R, Zhang L, Goldman R",
                "protein_xref_pubmed",
                "29427759",
                "protein_xref_automatic_literature_mining",
                "29427759",
                ""
            ],
            [
                "P03956-1",
                "N-glycan structures of matrix metalloproteinase-1 derived from human fibroblasts and from HT-1080 fibrosarcoma cells.",
                "European journal of biochemistry",
                "1999 Feb",
                "Saarinen J, Welgus HG, Flizar CA, Kalkkinen N, Helin J",
                "protein_xref_pubmed",
                "10092871",
                "protein_xref_automatic_literature_mining",
                "10092871",
                ""
            ],
            [
                "P04004-1",
                "Quantitative analysis of core fucosylation of serum proteins in liver diseases by LC-MS-MRM.",
                "Journal of proteomics",
                "2018 Oct 30",
                "Ma J, Sanda M, Wei R, Zhang L, Goldman R",
                "protein_xref_pubmed",
                "29427759",
                "protein_xref_automatic_literature_mining",
                "29427759",
                ""
            ],
            [
                "P04070-1",
                "Purification of protein C from canine plasma.",
                "BMC veterinary research",
                "2014 Oct 18",
                "Wong VM, Bienzle D, Hayes MA, Taylor P, Wood RD",
                "protein_xref_pubmed",
                "25326145",
                "protein_xref_automatic_literature_mining",
                "25326145",
                ""
            ],
            [
                "P04275-1",
                "N-linked glycosylation of VWF modulates its interaction with ADAMTS13.",
                "Blood",
                "2008 Mar 15",
                "McKinnon TA, Chion AC, Millington AJ, Lane DA, Laffan MA",
                "protein_xref_pubmed",
                "17975018",
                "protein_xref_automatic_literature_mining",
                "17975018",
                ""
            ],
            [
                "P04275-1",
                "Mapping the N-glycome of human von Willebrand factor.",
                "The Biochemical journal",
                "2012 Oct 15",
                "Canis K, McKinnon TA, Nowak A, Haslam SM, Panico M, Morris HR, Laffan MA, Dell A",
                "protein_xref_pubmed",
                "22849435",
                "protein_xref_automatic_literature_mining",
                "22849435",
                ""
            ],
            [
                "P04275-1",
                "N-linked glycan stabilization of the VWF A2 domain.",
                "Blood",
                "2016 Mar 31",
                "Lynch CJ, Lane DA",
                "protein_xref_pubmed",
                "26773038",
                "protein_xref_automatic_literature_mining",
                "26773038",
                ""
            ],
            [
                "P04275-1",
                "Site-specific analysis of von Willebrand factor O-glycosylation.",
                "Journal of thrombosis and haemostasis : JTH",
                "2016 Apr",
                "Solecka BA, Weise C, Laffan MA, Kannicht C",
                "protein_xref_pubmed",
                "26784534",
                "protein_xref_automatic_literature_mining",
                "26784534",
                ""
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                "29427759",
                ""
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                ""
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                "9620884",
                ""
            ],
            [
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                "8702840",
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                "26022737",
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            ],
            [
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                "24211831",
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            ],
            [
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                "2008 Feb 13",
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                "18180093",
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            [
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                ""
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            [
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                "Quantitative analysis of core fucosylation of serum proteins in liver diseases by LC-MS-MRM.",
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                "2018 Oct 30",
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                "protein_xref_pubmed",
                "29427759",
                "protein_xref_automatic_literature_mining",
                "29427759",
                ""
            ],
            [
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                "1993 Jul",
                "Carlsson SR, Lycksell PO, Fukuda M",
                "protein_xref_pubmed",
                "8323299",
                "protein_xref_automatic_literature_mining",
                "8323299",
                ""
            ],
            [
                "P11678-1",
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                "protein_xref_automatic_literature_mining",
                "10864452",
                ""
            ],
            [
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                "1993 Jul",
                "Carlsson SR, Lycksell PO, Fukuda M",
                "protein_xref_pubmed",
                "8323299",
                "protein_xref_automatic_literature_mining",
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                ""
            ],
            [
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            ],
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            ],
            [
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                "protein_xref_automatic_literature_mining",
                "21669976",
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            ],
            [
                "P16473-1",
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            ],
            [
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                "19369259",
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            ],
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                "7727388",
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            ],
            [
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            ],
            [
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            ],
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                "protein_xref_pubmed",
                "8638940",
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                "8638940",
                ""
            ],
            [
                "P21217-1",
                "The C-terminal N-glycosylation sites of the human alpha1,3/4-fucosyltransferase III, -V, and -VI (hFucTIII, -V, adn -VI) are necessary for the expression of full enzyme activity.",
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                "protein_xref_automatic_literature_mining",
                "10988254",
                ""
            ],
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                "21548981",
                "protein_xref_automatic_literature_mining",
                "21548981",
                ""
            ],
            [
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                "17563389",
                "protein_xref_automatic_literature_mining",
                "17563389",
                ""
            ],
            [
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                "2011 Jul 1",
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                "protein_xref_pubmed",
                "21550978",
                "protein_xref_automatic_literature_mining",
                "21550978",
                ""
            ]
        ]
    },
    "readme": "Name\n   - Human Proteoform Citations (Literature Mining)\n\nVersion\n   - 1.11.2\n\nCreated on\n  - 2020-06-26T15:29:27.375356\n\nModified on\n   - 2021-06-04T09:49:02.580309\n\nCreated by\n   - Rahi Navelkar [rsn13@gwu.edu], Jeet Vora [jeetvora@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Amanda Bell [amandab2140@gwu.edu], Jonathon Keeney [keeneyjg@gwu.edu], Millicent Quartey [mquartey@email.gwu.edu]\n\nAuthors\n   - \n\nChecksum\n   - \n\nUsability Domain\n   - The dataset provides citation details corresponding to the PubMed ID (PMID) from file https://data.glygen.org/GLYDS000481. The script accesses the NCBI ENTREZ infrastructure to retrieve the publication information of the given PMID.\n\nDescription Domain\n   Keywords\n   - PMID\n   - journal\n   - citations\n   - authors\n   - Literature\n   - PubMed\n\n   Pipeline Steps\n   - Step-1: The script parses the input file for PMIDs and accesses the NCBI Entrez infrastructure to download the publication information of the corresponding PMIDs.\n\nExecution Domain\n   Scripts   - https://github.com/GW-HIVE/glygen-backend-integration/blob/master/pipeline/integrator/make-proteoform-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: human_proteoform_glycosylation_sites_literature_mining.csv\n      URI: https://data.glygen.org//ln2releases/data/v-1.11.2/reviewed/human_proteoform_glycosylation_sites_literature_mining.csv\n   Output Subdomain\n      Name: human_proteoform_citations_glycosylation_literature_mining.csv\n      URI: http://data.glygen.org/ln2wwwdata/reviewed/human_proteoform_citations_glycosylation_literature_mining.csv\n      Name: human_proteoform_citations_glycosylation_literature_mining.stat.csv\n      URI: http://data.glygen.org/ln2wwwdata/reviewed/human_proteoform_citations_glycosylation_literature_mining.stat.csv",
    "downloadurl": "/ln2data/releases/data/v-1.12.1/reviewed/human_proteoform_citations_glycosylation_literature_mining.csv"
}
