{ "bcoid": "GLY_000038", "title": "Human Glycosylation Sites (UniProtKB)", "description": "The Human Glycosylation Sites (UniProtKB) dataset contains human [taxid:9606] UniProtKB canonical accessions ...", "filename": "human_proteoform_glycosylation_sites_uniprotkb.csv", "filetype": "csv", "categories": { "species": "Homo sapiens", "molecule": "Proteoform", "tags": "Glycosylation Sites", "file_type": "csv", "status": "Reviewed", "scope": "internal" }, "minitable": { "content": [ [ "P15848-1...", "426..." ], [ "Q9UIQ6-1...", "525..." ] ], "headers": [ "uniprotkb_ca...", "glycosylatio..." ], "colwidth": [ "40%", "20%" ] }, "sampledata": { "type": "table", "data": [ [ { "type": "string", "label": "uniprotkb_canonical_ac" }, { "type": "string", "label": "glycosylation_site_uniprotkb" }, { "type": "string", "label": "amino_acid" }, { "type": "string", "label": "saccharide" }, { "type": "string", "label": "glycosylation_type" }, { "type": "string", "label": "xref_key" }, { "type": "string", "label": "xref_id" }, { "type": "string", "label": "src_xref_key" }, { "type": "string", "label": "src_xref_id" }, { "type": "string", "label": "uniprotkb_glycosylation_annotation_comment" }, { "type": "string", "label": "data_source" }, { "type": "string", "label": "eco_id" }, { "type": "string", "label": "uniprotkb_ftid" }, { "type": "string", "label": "carb_name" }, { "type": "string", "label": "glycosylation_subtype" }, { "type": "string", "label": "n_sequon" }, { "type": "string", "label": "n_sequon_type" } ], [ "P15848-1", "426", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "P15848", "protein_xref_uniprotkb_gly", "P15848", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NTS", "NXS" ], [ "Q9UIQ6-1", "525", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q9UIQ6", "protein_xref_uniprotkb_gly", "Q9UIQ6", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NSS", "NXS" ], [ "P23471-1", "232", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "P23471", "protein_xref_uniprotkb_gly", "P23471", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NGS", "NXS" ], [ "P98164-1", "3978", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "P98164", "protein_xref_uniprotkb_gly", "P98164", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NCT", "NXT" ], [ "P04921-1", "9", "Ser", "", "O-linked", "protein_xref_uniprotkb_gly", "P04921", "protein_xref_uniprotkb_gly", "P04921", "O-linked (GalNAc...) serine", "PubMed", "ECO_0000269", "", "GalNAc...", "O-GalNAcylation", "", "" ], [ "P04921-1", "9", "Ser", "", "O-linked", "protein_xref_pubmed", "7106126", "protein_xref_uniprotkb_gly", "P04921", "O-linked (GalNAc...) serine", "PubMed", "ECO_0000269", "", "GalNAc...", "O-GalNAcylation", "", "" ], [ "O75094-1", "1025", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "O75094", "protein_xref_uniprotkb_gly", "O75094", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NYT", "NXT" ], [ "Q15910-1", "75", "Ser", "", "O-linked", "protein_xref_uniprotkb_gly", "Q15910", "protein_xref_uniprotkb_gly", "Q15910", "O-linked (GlcNAc) serine", "PubMed", "ECO_0000269", "", "GlcNAc", "O-GlcNAcylation", "", "" ], [ "Q15910-1", "75", "Ser", "", "O-linked", "protein_xref_pubmed", "24474760", "protein_xref_uniprotkb_gly", "Q15910", "O-linked (GlcNAc) serine", "PubMed", "ECO_0000269", "", "GlcNAc", "O-GlcNAcylation", "", "" ], [ "Q9UMF0-1", "795", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q9UMF0", "protein_xref_uniprotkb_gly", "Q9UMF0", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NNS", "NXS" ], [ "Q9UJW2-1", "360", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q9UJW2", "protein_xref_uniprotkb_gly", "Q9UJW2", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NET", "NXT" ], [ "Q8N1N0-1", "244", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q8N1N0", "protein_xref_uniprotkb_gly", "Q8N1N0", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NSS", "NXS" ], [ "Q96PZ7-1", "3260", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q96PZ7", "protein_xref_uniprotkb_gly", "Q96PZ7", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NLT", "NXT" ], [ "P49908-1", "338", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "P49908", "protein_xref_uniprotkb_gly", "P49908", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NIT", "NXT" ], [ "Q9UKJ8-1", "164", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q9UKJ8", "protein_xref_uniprotkb_gly", "Q9UKJ8", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NET", "NXT" ], [ "O15399-1", "352", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "O15399", "protein_xref_uniprotkb_gly", "O15399", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NRT", "NXT" ], [ "Q5T6X5-1", "121", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q5T6X5", "protein_xref_uniprotkb_gly", "Q5T6X5", "N-linked (GlcNAc...) asparagine", "PubMed", "ECO_0000269", "", "GlcNAc...", "", "NCS", "NXS" ], [ "Q5T6X5-1", "121", "Asn", "", "N-linked", "protein_xref_pubmed", "25617829", "protein_xref_uniprotkb_gly", "Q5T6X5", "N-linked (GlcNAc...) asparagine", "PubMed", "ECO_0000269", "", "GlcNAc...", "", "NCS", "NXS" ], [ "Q8TC27-1", "598", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q8TC27", "protein_xref_uniprotkb_gly", "Q8TC27", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NGS", "NXS" ], [ "Q695T7-1", "182", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q695T7", "protein_xref_uniprotkb_gly", "Q695T7", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NIS", "NXS" ], [ "Q13740-1", "480", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q13740", "protein_xref_uniprotkb_gly", "Q13740", "N-linked (GlcNAc...) asparagine", "PubMed", "ECO_0000269", "", "GlcNAc...", "", "NVT", "NXT" ], [ "Q13740-1", "480", "Asn", "", "N-linked", "protein_xref_pubmed", "19159218", "protein_xref_uniprotkb_gly", "Q13740", "N-linked (GlcNAc...) asparagine", "PubMed", "ECO_0000269", "", "GlcNAc...", "", "NVT", "NXT" ], [ "Q13740-1", "480", "Asn", "", "N-linked", "protein_xref_pubmed", "12754519", "protein_xref_uniprotkb_gly", "Q13740", "N-linked (GlcNAc...) asparagine", "PubMed", "ECO_0000269", "", "GlcNAc...", "", "NVT", "NXT" ], [ "P35442-1", "1069", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "P35442", "protein_xref_uniprotkb_gly", "P35442", "N-linked (GlcNAc...) asparagine", "PubMed", "ECO_0000269", "", "GlcNAc...", "", "NST", "NXT" ], [ "P35442-1", "1069", "Asn", "", "N-linked", "protein_xref_pubmed", "16186819", "protein_xref_uniprotkb_gly", "P35442", "N-linked (GlcNAc...) asparagine", "PubMed", "ECO_0000269", "", "GlcNAc...", "", "NST", "NXT" ], [ "O15389-1", "384", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "O15389", "protein_xref_uniprotkb_gly", "O15389", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NSS", "NXS" ], [ "P08648-1", "724", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "P08648", "protein_xref_uniprotkb_gly", "P08648", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NQS", "NXS" ], [ "O14522-3", "654", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "O14522", "protein_xref_uniprotkb_gly", "O14522", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NAS", "NXS" ], [ "Q15822-1", "79", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q15822", "protein_xref_uniprotkb_gly", "Q15822", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NTS", "NXS" ], [ "O00469-1", "209", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "O00469", "protein_xref_uniprotkb_gly", "O00469", "N-linked (GlcNAc...) asparagine", "PubMed", "ECO_0000269", "", "GlcNAc...", "", "NIT", "NXT" ], [ "O00469-1", "209", "Asn", "", "N-linked", "protein_xref_pubmed", "19159218", "protein_xref_uniprotkb_gly", "O00469", "N-linked (GlcNAc...) asparagine", "PubMed", "ECO_0000269", "", "GlcNAc...", "", "NIT", "NXT" ], [ "Q75N90-1", "1658", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q75N90", "protein_xref_uniprotkb_gly", "Q75N90", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NGT", "NXT" ], [ "Q9H293-1", "136", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q9H293", "protein_xref_uniprotkb_gly", "Q9H293", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NQT", "NXT" ], [ "Q86YC3-1", "427", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q86YC3", "protein_xref_uniprotkb_gly", "Q86YC3", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NIT", "NXT" ], [ "P14780-1", "127", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "P14780", "protein_xref_uniprotkb_gly", "P14780", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NYS", "NXS" ], [ "Q9HC84-1", "5526", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q9HC84", "protein_xref_uniprotkb_gly", "Q9HC84", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NGT", "NXT" ], [ "O14818-1", "130", "Ser", "", "O-linked", "protein_xref_uniprotkb_gly", "O14818", "protein_xref_uniprotkb_gly", "O14818", "O-linked (GlcNAc) serine", "", "", "", "GlcNAc", "O-GlcNAcylation", "", "" ], [ "O94911-3", "1435", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "O94911", "protein_xref_uniprotkb_gly", "O94911", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NPS", "NXS" ], [ "Q9Y6N7-1", "790", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q9Y6N7", "protein_xref_uniprotkb_gly", "Q9Y6N7", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NGT", "NXT" ], [ "O75976-1", "399", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "O75976", "protein_xref_uniprotkb_gly", "O75976", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NAT", "NXT" ], [ "Q9H156-1", "84", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q9H156", "protein_xref_uniprotkb_gly", "Q9H156", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NYS", "NXS" ], [ "P29622-1", "157", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "P29622", "protein_xref_uniprotkb_gly", "P29622", "N-linked (GlcNAc...) asparagine", "PubMed", "ECO_0000269", "", "GlcNAc...", "", "NDT", "NXT" ], [ "P29622-1", "157", "Asn", "", "N-linked", "protein_xref_pubmed", "12754519", "protein_xref_uniprotkb_gly", "P29622", "N-linked (GlcNAc...) asparagine", "PubMed", "ECO_0000269", "", "GlcNAc...", "", "NDT", "NXT" ], [ "P29622-1", "157", "Asn", "", "N-linked", "protein_xref_pubmed", "16335952", "protein_xref_uniprotkb_gly", "P29622", "N-linked (GlcNAc...) asparagine", "PubMed", "ECO_0000269", "", "GlcNAc...", "", "NDT", "NXT" ], [ "P35916-2", "166", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "P35916", "protein_xref_uniprotkb_gly", "P35916", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NVT", "NXT" ], [ "Q7Z5N4-1", "821", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q7Z5N4", "protein_xref_uniprotkb_gly", "Q7Z5N4", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NIT", "NXT" ], [ "P01266-1", "1869", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "P01266", "protein_xref_uniprotkb_gly", "P01266", "N-linked (GlcNAc...) asparagine", "PDB", "ECO_0000312", "", "GlcNAc...", "", "NQS", "NXS" ], [ "P01266-1", "1869", "Asn", "", "N-linked", "protein_xref_pdb4glycosylation", "6SCJ", "protein_xref_uniprotkb_gly", "P01266", "N-linked (GlcNAc...) asparagine", "PDB", "ECO_0000312", "", "GlcNAc...", "", "NQS", "NXS" ], [ "P01266-1", "1869", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "P01266", "protein_xref_uniprotkb_gly", "P01266", "N-linked (GlcNAc...) asparagine", "PubMed", "ECO_0000269", "", "GlcNAc...", "", "NQS", "NXS" ], [ "P01266-1", "1869", "Asn", "", "N-linked", "protein_xref_pubmed", "32025030", "protein_xref_uniprotkb_gly", "P01266", "N-linked (GlcNAc...) asparagine", "PubMed", "ECO_0000269", "", "GlcNAc...", "", "NQS", "NXS" ], [ "Q9BU40-6", "291", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q9BU40", "protein_xref_uniprotkb_gly", "Q9BU40", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NVT", "NXT" ], [ "Q8IZF3-1", "309", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q8IZF3", "protein_xref_uniprotkb_gly", "Q8IZF3", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NVS", "NXS" ], [ "P06133-1", "315", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "P06133", "protein_xref_uniprotkb_gly", "P06133", "N-linked (GlcNAc...) asparagine", "PubMed", "ECO_0000269", "", "GlcNAc...", "", "NTS", "NXS" ], [ "P06133-1", "315", "Asn", "", "N-linked", "protein_xref_pubmed", "19159218", "protein_xref_uniprotkb_gly", "P06133", "N-linked (GlcNAc...) asparagine", "PubMed", "ECO_0000269", "", "GlcNAc...", "", "NTS", "NXS" ], [ "P08183-1", "99", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "P08183", "protein_xref_uniprotkb_gly", "P08183", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NDT", "NXT" ], [ "Q96R48-1", "4", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q96R48", "protein_xref_uniprotkb_gly", "Q96R48", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NQT", "NXT" ], [ "Q96DR5-1", "132", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q96DR5", "protein_xref_uniprotkb_gly", "Q96DR5", "N-linked (GlcNAc...) asparagine", "PubMed", "ECO_0000269", "", "GlcNAc...", "", "NVT", "NXT" ], [ "Q96DR5-1", "132", "Asn", "", "N-linked", "protein_xref_pubmed", "16740002", "protein_xref_uniprotkb_gly", "Q96DR5", "N-linked (GlcNAc...) asparagine", "PubMed", "ECO_0000269", "", "GlcNAc...", "", "NVT", "NXT" ], [ "Q6UWL2-1", "112", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q6UWL2", "protein_xref_uniprotkb_gly", "Q6UWL2", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NKT", "NXT" ], [ "Q9Y5Y0-1", "265", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q9Y5Y0", "protein_xref_uniprotkb_gly", "Q9Y5Y0", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NDT", "NXT" ], [ "Q9Y5F9-1", "419", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q9Y5F9", "protein_xref_uniprotkb_gly", "Q9Y5F9", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NVT", "NXT" ], [ "Q86SQ4-1", "258", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q86SQ4", "protein_xref_uniprotkb_gly", "Q86SQ4", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NNS", "NXS" ], [ "P03986-1", "142", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "P03986", "protein_xref_uniprotkb_gly", "P03986", "N-linked (GlcNAc...) asparagine", "prosite-prorule", "ECO_0000255", "", "GlcNAc...", "", "NDT", "NXT" ], [ "P03986-1", "142", "Asn", "", "N-linked", "protein_xref_prosite-prorule", "PRU00498", "protein_xref_uniprotkb_gly", "P03986", "N-linked (GlcNAc...) asparagine", "prosite-prorule", "ECO_0000255", "", "GlcNAc...", "", "NDT", "NXT" ], [ "Q9UGQ3-1", "370", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q9UGQ3", "protein_xref_uniprotkb_gly", "Q9UGQ3", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NST", "NXT" ], [ "Q14126-1", "182", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q14126", "protein_xref_uniprotkb_gly", "Q14126", "N-linked (GlcNAc...) asparagine", "PubMed", "ECO_0000269", "", "GlcNAc...", "", "NAT", "NXT" ], [ "Q14126-1", "182", "Asn", "", "N-linked", "protein_xref_pubmed", "19159218", "protein_xref_uniprotkb_gly", "Q14126", "N-linked (GlcNAc...) asparagine", "PubMed", "ECO_0000269", "", "GlcNAc...", "", "NAT", "NXT" ], [ "Q14126-1", "182", "Asn", "", "N-linked", "protein_xref_pubmed", "16335952", "protein_xref_uniprotkb_gly", "Q14126", "N-linked (GlcNAc...) asparagine", "PubMed", "ECO_0000269", "", "GlcNAc...", "", "NAT", "NXT" ], [ "Q14126-1", "182", "Asn", "", "N-linked", "protein_xref_pubmed", "19349973", "protein_xref_uniprotkb_gly", "Q14126", "N-linked (GlcNAc...) asparagine", "PubMed", "ECO_0000269", "", "GlcNAc...", "", "NAT", "NXT" ], [ "Q9P0T7-1", "38", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q9P0T7", "protein_xref_uniprotkb_gly", "Q9P0T7", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NIS", "NXS" ], [ "O60383-1", "106", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "O60383", "protein_xref_uniprotkb_gly", "O60383", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NRS", "NXS" ], [ "P12645-1", "220", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "P12645", "protein_xref_uniprotkb_gly", "P12645", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NIT", "NXT" ], [ "Q6IE38-1", "51", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q6IE38", "protein_xref_uniprotkb_gly", "Q6IE38", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NGT", "NXT" ], [ "Q03167-1", "492", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q03167", "protein_xref_uniprotkb_gly", "Q03167", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NGT", "NXT" ], [ "Q9UKX5-1", "331", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q9UKX5", "protein_xref_uniprotkb_gly", "Q9UKX5", "N-linked (GlcNAc...) asparagine", "PubMed", "ECO_0000269", "", "GlcNAc...", "", "NVT", "NXT" ], [ "Q9UKX5-1", "331", "Asn", "", "N-linked", "protein_xref_pubmed", "19159218", "protein_xref_uniprotkb_gly", "Q9UKX5", "N-linked (GlcNAc...) asparagine", "PubMed", "ECO_0000269", "", "GlcNAc...", "", "NVT", "NXT" ], [ "Q9NZP2-1", "3", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q9NZP2", "protein_xref_uniprotkb_gly", "Q9NZP2", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NHT", "NXT" ], [ "Q95460-1", "107", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q95460", "protein_xref_uniprotkb_gly", "Q95460", "N-linked (GlcNAc...) asparagine", "PubMed", "ECO_0000269", "", "GlcNAc...", "", "NHS", "NXS" ], [ "Q95460-1", "107", "Asn", "", "N-linked", "protein_xref_pubmed", "12794138", "protein_xref_uniprotkb_gly", "Q95460", "N-linked (GlcNAc...) asparagine", "PubMed", "ECO_0000269", "", "GlcNAc...", "", "NHS", "NXS" ], [ "A0A075B767-1", "108", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "A0A075B767", "protein_xref_uniprotkb_gly", "A0A075B767", "N-linked (GlcNAc...) asparagine", "prosite-prorule", "ECO_0000255", "", "GlcNAc...", "", "NGS", "NXS" ], [ "A0A075B767-1", "108", "Asn", "", "N-linked", "protein_xref_prosite-prorule", "PRU00498", "protein_xref_uniprotkb_gly", "A0A075B767", "N-linked (GlcNAc...) asparagine", "prosite-prorule", "ECO_0000255", "", "GlcNAc...", "", "NGS", "NXS" ], [ "Q9ULI3-1", "180", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "Q9ULI3", "protein_xref_uniprotkb_gly", "Q9ULI3", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NFT", "NXT" ], [ "Q99102-1", "2454", "Thr", "", "O-linked", "protein_xref_uniprotkb_gly", "Q99102", "protein_xref_uniprotkb_gly", "Q99102", "O-linked (GalNAc...) threonine", "", "", "", "GalNAc...", "O-GalNAcylation", "", "" ], [ "P31641-1", "163", "Asn", "", "N-linked", "protein_xref_uniprotkb_gly", "P31641", "protein_xref_uniprotkb_gly", "P31641", "N-linked (GlcNAc...) asparagine", "", "", "", "GlcNAc...", "", "NHS", "NXS" ] ] }, "readme": "Name\n - Human Glycosylation Sites (UniProtKB)\n\nVersion\n - 1.11.2\n\nCreated on\n - 2019-01-23T17:21:05.905721\n\nModified on\n - 2020-04-10T11:27:49.618489\n\nCreated by\n - Jeet Vora [jeetvora@gwu.edu], Rahi Navelkar [rsn13@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Xavier Holmes [xavierh@email.gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Amanda Bell [amandab2140@gwu.edu], Jonathon Keeney [keeneyjg@gwu.edu], Millicent Quartey [mquartey@email.gwu.edu]\n\nAuthors\n - Maria Martin [martin@ebi.ac.uk], Preethi Vasudev [pvasudev@ebi.ac.uk]\n\nChecksum\n - \n\nUsability Domain\n - The Human Glycosylation Sites (UniProtKB) dataset contains human [taxid:9606] UniProtKB canonical accessions with information on reported and predicted glycosylation sites in UniProtKB database. The dataset is derived from 2019-09 UniProtKB release. If you use this dataset please provide proper attribution to EMBL-EBI-UniProtKB and GlyGen\n\nDescription Domain\n Keywords\n - glycosylation\n - reported glycosylation\n - predicted glycosylation\n - UniProtKB\n - PubMed\n - Evidence and conclusion Ontology\n\n Pipeline Steps\n - Step-1: The script loads the glycosylation information from the triplestore conatining triples from the nt file and extracts as a csv dataset\n\nExecution Domain\n Scripts - https://github.com/GW-HIVE/glygen-backend-integration/blob/master/pipeline/integrator/make-proteoform-dataset.py\n\n\n Software Prerequisites\n Name: Python\n Version: 2.7.5\n URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n Input Subdomain\n Name: uniprot-proteome-homo-sapiens.nt\n URI: https://data.glygen.org//ln2downloads/ebi/2021_03/uniprot-proteome-homo-sapiens.nt\n Name: human_protein_masterlist.csv\n URI: https://data.glygen.org//ln2releases/data/v-1.11.2/reviewed/human_protein_masterlist.csv\n Output Subdomain\n Name: human_proteoform_glycosylation_sites_uniprotkb.csv\n URI: http://data.glygen.org/datasets/reviewed/human_proteoform_glycosylation_sites_uniprotkb.csv\n Name: human_proteoform_glycosylation_sites_uniprotkb.stat.csv\n URI: http://data.glygen.org/datasets/reviewed/human_proteoform_glycosylation_sites_uniprotkb.stat.csv", "downloadurl": "/ln2data/releases/data/v-1.12.1/reviewed/human_proteoform_glycosylation_sites_uniprotkb.csv" }