{
    "bcoid": "GLY_000487",
    "title": "HCV1a Protein Diseases",
    "description": "The Hepatitis C virus (genotype 1a, isolate H) Protein Diseases dataset contains disease caused by hcv1a ...",
    "filename": "hcv1a_protein_disease_glygen.csv",
    "filetype": "csv",
    "categories": {
        "species": "Hepatitis C virus (genotype 1a, isolate H)",
        "molecule": "Protein",
        "tags": "disease",
        "file_type": "csv",
        "status": "Reviewed",
        "scope": "internal"
    },
    "minitable": {
        "content": [
            [
                "P27958-1...",
                "protein_xref..."
            ],
            [
                "P27958-1...",
                "protein_xref..."
            ]
        ],
        "headers": [
            "uniprotkb_ca...",
            "xref_key..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "uniprotkb_canonical_ac"
                },
                {
                    "type": "string",
                    "label": "xref_key"
                },
                {
                    "type": "string",
                    "label": "xref_id"
                },
                {
                    "type": "string",
                    "label": "do_id"
                },
                {
                    "type": "string",
                    "label": "mondo_id"
                },
                {
                    "type": "string",
                    "label": "mim_id"
                }
            ],
            [
                "P27958-1",
                "protein_xref_glygen_ds",
                "GLYGDS000487",
                "1883",
                "",
                ""
            ],
            [
                "P27958-1",
                "protein_xref_glygen_ds",
                "GLYGDS000487",
                "5082",
                "",
                ""
            ],
            [
                "P27958-1",
                "protein_xref_glygen_ds",
                "GLYGDS000487",
                "684",
                "",
                ""
            ]
        ]
    },
    "readme": "Name\n   - HCV1a Protein Diseases\n\nVersion\n   - 1.11.2\n\nCreated on\n  - 2020-04-29T16:14:08.766000\n\nModified on\n   - 2020-04-29T21:53:36.212672\n\nCreated by\n   - Jeet Vora [jeetvora@gwu.edu], Rahi Navelkar [rsn13@gwu.edu], Robel Kahsay [rykahsay@gwu.edu], Karina Martinez [karinamartinez@gwu.edu], Amanda Bell [amandab2140@gwu.edu], Jonathon Keeney [keeneyjg@gwu.edu], Millicent Quartey [mquartey@email.gwu.edu]\n\nAuthors\n   - \n\nChecksum\n   - \n\nUsability Domain\n   - The Hepatitis C virus (genotype 1a, isolate H) Protein Diseases dataset contains disease caused by hcv1a virus [taxid:11108] which is Hepatitis C, Liver Cirrhosis and Hepatocellular carcinoma and is mapped to all UniProtKB canonical accessions. The dataset contains Hepatitis C, Liver Cirrhosis and Hepatocellular carcinoma disease ontology ID and GlyGen dataset ID. The input file for this dataset is compiled by GlyGen. If you use this dataset please give proper attribution to GlyGen.\n\nDescription Domain\n   Keywords\n   - Hepatitis C\n   - Liver Cirrhosis\n   - Hepatocellular Carcinoma\n   - disease\n   - HCV\n\n   Pipeline Steps\n   - Step-1: The script extracts the UniProtKB canonical accessions, database name, database ID and DOID from the input file as a dataset in a csv format\n\nExecution Domain\n   Scripts   - https://github.com/GW-HIVE/glygen-backend-integration/blob/master/pipeline/integrator/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: hcv1a_protein_disease.csv\n      URI: https://data.glygen.org/ln2wwwdata/compiled/hcv1a_protein_disease.csv\n   Output Subdomain\n      Name: hcv1a_protein_disease_glygen.csv\n      URI: https://data.glygen.org/ln2wwwdata/reviewed/hcv1a_protein_disease.csv\n      Name: hcv1a_protein_disease.stat.csv\n      URI: https://data.glygen.org/ln2wwwdata/reviewed/hcv1a_protein_disease.stat.csv",
    "downloadurl": "/ln2data/releases/data/v-1.11.2/reviewed/hcv1a_protein_disease_glygen.csv"
}