{
    "io_domain": {
        "input_subdomain": [
            {
                "uri": {
                    "access_time": "", 
                    "sha1_chksum": "", 
                    "uri": "https://data.glygen.org//ln2downloads/glytoucan/gtc_06_30_2021/export/bcsdb.tsv", 
                    "filename": "bcsdb.tsv"
                }
            }
        ], 
        "output_subdomain": [
            {
                "mediatype": "csv", 
                "uri": {
                    "access_time": "2019-11-12T15:04:18-0500", 
                    "sha1_chksum": "", 
                    "uri": "http://data.glygen.org/ln2wwwdata/reviewed/glycan_xref_bcsdb.csv", 
                    "filename": "glycan_xref_bcsdb.csv"
                }
            }, 
            {
                "mediatype": "csv", 
                "uri": {
                    "access_time": "", 
                    "sha1_chksum": "", 
                    "uri": "http://data.glygen.org/ln2wwwdata/reviewed/glycan_xref_bcsdb.stat.csv", 
                    "filename": "glycan_xref_bcsdb.stat.csv"
                }
            }
        ]
    }, 
    "bco_spec_version": "1.3.0", 
    "checksum": "34b9dd4470e79b26c3ce5a7e774edc10", 
    "extension_domain": {
        "additional_license": {
            "data_license": "https://creativecommons.org/licenses/by/4.0/", 
            "script_license": "https://www.gnu.org/licenses/gpl-3.0.en.html"
        }, 
        "fhir_extension": [], 
        "scm_extension": {
            "scm_repository": "", 
            "scm_path": "", 
            "scm_type": "git", 
            "scm_commit": ""
        }, 
        "dataset_categories": [
            {
                "category_value": "Glycan", 
                "category_name": "molecule"
            }, 
            {
                "category_value": "BCSDB cross-references", 
                "category_name": "tags"
            }, 
            {
                "category_value": "Reviewed", 
                "category_name": "status"
            }, 
            {
                "category_value": "csv", 
                "category_name": "file_type"
            }, 
            {
                "category_value": "internal", 
                "category_name": "scope"
            }
        ]
    }, 
    "provenance_domain": {
        "license": "https://creativecommons.org/licenses/by/4.0/", 
        "name": "Glycan Xref BCSDB", 
        "contributors": [
            {
                "orcid": "", 
                "affiliation": "The George Washington University", 
                "contribution": [
                    "createdBy"
                ], 
                "name": "Rahi Navelkar", 
                "email": "rsn13@gwu.edu"
            }, 
            {
                "orcid": "", 
                "affiliation": "The George Washington University", 
                "contribution": [
                    "createdBy"
                ], 
                "name": "Jeet Vora", 
                "email": "jeetvora@gwu.edu"
            }, 
            {
                "orcid": "", 
                "affiliation": "The George Washington University", 
                "contribution": [
                    "createdBy"
                ], 
                "name": "Robel Kahsay", 
                "email": "rykahsay@gwu.edu"
            }, 
            {
                "orcid": "", 
                "affiliation": "Georgetown University", 
                "contribution": [
                    "contributedBy"
                ], 
                "name": "Nathan Edwards", 
                "email": "nje5@georgetown.edu"
            }, 
            {
                "orcid": "", 
                "affiliation": "The George Washington University", 
                "contribution": [
                    "createdBy"
                ], 
                "name": "Karina Martinez", 
                "email": "karinamartinez@gwu.edu"
            }, 
            {
                "orcid": "", 
                "affiliation": "The George Washington University", 
                "contribution": [
                    "createdBy"
                ], 
                "name": "Amanda Bell", 
                "email": "amandab2140@gwu.edu"
            }, 
            {
                "orcid": "", 
                "affiliation": "The George Washington University", 
                "contribution": [
                    "createdBy"
                ], 
                "name": "Jonathon Keeney", 
                "email": "keeneyjg@gwu.edu"
            }, 
            {
                "orcid": "", 
                "affiliation": "The George Washington University", 
                "contribution": [
                    "createdBy"
                ], 
                "name": "Millicent Quartey", 
                "email": "mquartey@email.gwu.edu"
            }
        ], 
        "created": "2019-11-13T16:51:37.145018", 
        "modified": "2020-05-01T15:06:14.232324", 
        "version": "1.11.2"
    }, 
    "description_domain": {
        "keywords": [
            "Glycan", 
            "GlyTouCan Accession", 
            "BCSDB", 
            "Cross-references", 
            "ID/Accession Mapping"
        ], 
        "pipeline_steps": [
            {
                "name": "make-species-agnostic-dataset.py", 
                "step_number": 1, 
                "version": "", 
                "input_list": [
                    {
                        "access_time": "2019-11-12T15:00:18-0500", 
                        "uri": "https://data.glygen.org/ln2wwwdata/source/bcsdb.tsv", 
                        "filename": "bcsdb.tsv"
                    }
                ], 
                "output_list": [
                    {
                        "access_time": "2019-11-12T15:04:18-0500", 
                        "uri": "https://data.glygen.org/ln2wwwdata/source/glycan_xref_bcsdb.csv", 
                        "filename": "glycan_xref_bcsdb.csv"
                    }
                ], 
                "prerequisite": [], 
                "description": "The input file was downloaded from the author and a python script is used to extract the data for the GlyTouCan accessions based on the acession master list. Refer to the usability domain for more information on master list."
            }
        ]
    }, 
    "execution_domain": {
        "external_data_endpoints": [], 
        "environment_variables": {}, 
        "script_driver": "manual", 
        "software_prerequisites": [
            {
                "version": "2.7.5", 
                "name": "Python", 
                "uri": {
                    "access_time": "2019-11-12T15:00:18-0500", 
                    "sha1_chksum": "", 
                    "uri": "https://www.python.org/download/releases/2.7.5/"
                }
            }
        ], 
        "script": [
            {
                "uri": {
                    "access_time": "2019-11-12T15:00:18-0500", 
                    "sha1_chksum": "", 
                    "uri": "https://github.com/GW-HIVE/glygen-backend-integration/blob/master/pipeline/integrator/make-species-agnostic-dataset.py", 
                    "filename": "make-species-agnostic-dataset.py"
                }
            }
        ]
    }, 
    "error_domain": {
        "empirical_error": {}, 
        "algorithmic_error": {}
    }, 
    "parametric_domain": [
        {
            "step": "", 
            "value": "", 
            "param": ""
        }
    ], 
    "usability_domain": [
        "The dataset provides cross-references to BCSDB ID's for the associated glycan (GlyTouCan Accession). The listed GlyTouCan Accessions are derived from the  GlyTouCan accession master list (https://data.glygen.org/GLYDS000281). Source database: https://glytoucan.org/; http://csdb.glycoscience.ru/bacterial/"
    ], 
    "_id": {
        "$oid": "5dcc7ae9f5c47b2dad46a995"
    }, 
    "bco_id": "http://data.glygen.org/GLY_000294"
}