{
    "bcoid": "GLY_000597",
    "title": "Human UniProtKB Xref Rhea",
    "description": "The Human UniProtKB Xref Rhea contains human [taxid:9606] UniProtKB canonical accessions cross-referenced ...",
    "filename": "human_protein_xref_rhea.csv",
    "filetype": "csv",
    "categories": {
        "species": "Homo sapiens",
        "molecule": "Protein",
        "tags": "Rhea cross-references",
        "file_type": "csv",
        "status": "Reviewed",
        "scope": "internal"
    },
    "minitable": {
        "content": [
            [
                "P30613-1...",
                "protein_xref..."
            ],
            [
                "A0A1W2PQ27-1...",
                "protein_xref..."
            ]
        ],
        "headers": [
            "uniprotkb_ca...",
            "xref_key..."
        ],
        "colwidth": [
            "40%",
            "20%"
        ]
    },
    "sampledata": {
        "type": "table",
        "data": [
            [
                {
                    "type": "string",
                    "label": "uniprotkb_canonical_ac"
                },
                {
                    "type": "string",
                    "label": "xref_key"
                },
                {
                    "type": "string",
                    "label": "xref_id"
                },
                {
                    "type": "string",
                    "label": "xref_label"
                }
            ],
            [
                "P30613-1",
                "protein_xref_rhea",
                "18157",
                "ATP + pyruvate = ADP + H(+) + phosphoenolpyruvate"
            ],
            [
                "A0A1W2PQ27-1",
                "protein_xref_rhea",
                "20629",
                "H2O + O-phospho-L-seryl-[protein] = L-seryl-[protein] + phosphate"
            ],
            [
                "A0A1W2PQ27-1",
                "protein_xref_rhea",
                "47004",
                "H2O + O-phospho-L-threonyl-[protein] = L-threonyl-[protein] + phosphate"
            ],
            [
                "O75962-1",
                "protein_xref_rhea",
                "17989",
                "ATP + L-seryl-[protein] = ADP + H(+) + O-phospho-L-seryl-[protein]"
            ],
            [
                "O75962-1",
                "protein_xref_rhea",
                "46608",
                "ATP + L-threonyl-[protein] = ADP + H(+) + O-phospho-L-threonyl-[protein]"
            ],
            [
                "P23919-1",
                "protein_xref_rhea",
                "13517",
                "ATP + dTMP = ADP + dTDP"
            ],
            [
                "Q96J66-1",
                "protein_xref_rhea",
                "19121",
                "an S-substituted glutathione(in) + ATP + H2O = ADP + an S-substituted glutathione(out) + H(+) + phosphate"
            ],
            [
                "Q96J66-1",
                "protein_xref_rhea",
                "38963",
                "ATP + H2O + leukotriene C4(in) = ADP + H(+) + leukotriene C4(out) + phosphate"
            ],
            [
                "Q96J66-1",
                "protein_xref_rhea",
                "50052",
                "ATP + H2O + taurocholate(in) = ADP + H(+) + phosphate + taurocholate(out)"
            ],
            [
                "Q96J66-1",
                "protein_xref_rhea",
                "50056",
                "ATP + glycocholate(in) + H2O = ADP + glycocholate(out) + H(+) + phosphate"
            ],
            [
                "Q96J66-1",
                "protein_xref_rhea",
                "60128",
                "17beta-estradiol 17-O-(beta-D-glucuronate)(in) + ATP + H2O = 17beta-estradiol 17-O-(beta-D-glucuronate)(out) + ADP + H(+) + phosphate"
            ],
            [
                "Q96J66-1",
                "protein_xref_rhea",
                "61348",
                "ATP + estrone 3-sulfate(in) + H2O = ADP + estrone 3-sulfate(out) + H(+) + phosphate"
            ],
            [
                "Q96J66-1",
                "protein_xref_rhea",
                "61364",
                "3beta-sulfooxy-androst-5-en-17-one(in) + ATP + H2O = 3beta-sulfooxy-androst-5-en-17-one(out) + ADP + H(+) + phosphate"
            ],
            [
                "Q96J66-1",
                "protein_xref_rhea",
                "66184",
                "3',5'-cyclic AMP(in) + ATP + H2O = 3',5'-cyclic AMP(out) + ADP + H(+) + phosphate"
            ],
            [
                "Q96J66-1",
                "protein_xref_rhea",
                "66188",
                "3',5'-cyclic GMP(in) + ATP + H2O = 3',5'-cyclic GMP(out) + ADP + H(+) + phosphate"
            ],
            [
                "Q96J66-1",
                "protein_xref_rhea",
                "61380",
                "2,4-dinitrophenyl-S-glutathione(in) + ATP + H2O = 2,4-dinitrophenyl-S-glutathione(out) + ADP + H(+) + phosphate"
            ],
            [
                "P03891-1",
                "protein_xref_rhea",
                "29091",
                "a ubiquinone + 5 H(+)(in) + NADH = a ubiquinol + 4 H(+)(out) + NAD(+)"
            ],
            [
                "P03897-1",
                "protein_xref_rhea",
                "29091",
                "a ubiquinone + 5 H(+)(in) + NADH = a ubiquinol + 4 H(+)(out) + NAD(+)"
            ],
            [
                "Q9Y237-1",
                "protein_xref_rhea",
                "16237",
                "[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)"
            ],
            [
                "Q9P2J5-1",
                "protein_xref_rhea",
                "11688",
                "ATP + L-leucine + tRNA(Leu) = AMP + diphosphate + L-leucyl-tRNA(Leu)"
            ],
            [
                "Q969W1-1",
                "protein_xref_rhea",
                "36683",
                "hexadecanoyl-CoA + L-cysteinyl-[protein] = CoA + S-hexadecanoyl-L-cysteinyl-[protein]"
            ],
            [
                "Q86YW0-1",
                "protein_xref_rhea",
                "33179",
                "a 1,2-diacyl-sn-glycero-3-phospho-(1D-myo-inositol-4,5-bisphosphate) + H2O = 1D-myo-inositol 1,4,5-trisphosphate + a 1,2-diacyl-sn-glycerol + H(+)"
            ],
            [
                "Q9BZG2-1",
                "protein_xref_rhea",
                "15017",
                "a phosphate monoester + H2O = an alcohol + phosphate"
            ],
            [
                "Q9BZG8-1",
                "protein_xref_rhea",
                "36783",
                "L-histidyl-[translation elongation factor 2] + S-adenosyl-L-methionine = 2-[(3S)-amino-3-carboxypropyl]-L-histidyl-[translation elongation factor 2] + H(+) + S-methyl-5'-thioadenosine"
            ],
            [
                "Q14562-1",
                "protein_xref_rhea",
                "13065",
                "ATP + H2O = ADP + H(+) + phosphate"
            ],
            [
                "Q14566-1",
                "protein_xref_rhea",
                "13065",
                "ATP + H2O = ADP + H(+) + phosphate"
            ],
            [
                "Q9Y265-1",
                "protein_xref_rhea",
                "13065",
                "ATP + H2O = ADP + H(+) + phosphate"
            ],
            [
                "Q9Y265-1",
                "protein_xref_rhea",
                "13065",
                "ATP + H2O = ADP + H(+) + phosphate"
            ],
            [
                "Q6ZMG9-1",
                "protein_xref_rhea",
                "36547",
                "octadecanoyl-CoA + sphinganine = CoA + H(+) + N-(octadecanoyl)-sphinganine"
            ],
            [
                "Q6ZMG9-1",
                "protein_xref_rhea",
                "36571",
                "sphinganine + tetradecanoyl-CoA = CoA + H(+) + N-(tetradecanoyl)-sphinganine"
            ],
            [
                "Q6ZMG9-1",
                "protein_xref_rhea",
                "43040",
                "hexadecanoyl-CoA + hexadecasphinganine = CoA + H(+) + N-hexadecanoylhexadecasphinganine"
            ],
            [
                "Q6ZMG9-1",
                "protein_xref_rhea",
                "36539",
                "hexadecanoyl-CoA + sphinganine = CoA + H(+) + N-hexadecanoylsphinganine"
            ],
            [
                "Q6ZMG9-1",
                "protein_xref_rhea",
                "36687",
                "hexadecanoyl-CoA + sphing-4-enine = CoA + H(+) + N-hexadecanoylsphing-4-enine"
            ],
            [
                "P41250-1",
                "protein_xref_rhea",
                "16013",
                "ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly)"
            ],
            [
                "P41250-1",
                "protein_xref_rhea",
                "34935",
                "2 ATP + H(+) = diphosphate + P(1),P(4)-bis(5'-adenosyl) tetraphosphate"
            ],
            [
                "Q7L592-1",
                "protein_xref_rhea",
                "48108",
                "L-arginyl-[protein] + 2 S-adenosyl-L-methionine = 2 H(+) + N(omega),N(omega)'-dimethyl-L-arginyl-[protein] + 2 S-adenosyl-L-homocysteine"
            ],
            [
                "O60729-1",
                "protein_xref_rhea",
                "10684",
                "H2O + O-phospho-L-tyrosyl-[protein] = L-tyrosyl-[protein] + phosphate"
            ],
            [
                "O60729-1",
                "protein_xref_rhea",
                "20629",
                "H2O + O-phospho-L-seryl-[protein] = L-seryl-[protein] + phosphate"
            ],
            [
                "O60729-1",
                "protein_xref_rhea",
                "47004",
                "H2O + O-phospho-L-threonyl-[protein] = L-threonyl-[protein] + phosphate"
            ],
            [
                "Q96BT7-1",
                "protein_xref_rhea",
                "43208",
                "carboxymethyluridine(34) in tRNA + S-adenosyl-L-methionine = 5-(2-methoxy-2-oxoethyl)uridine(34) in tRNA + S-adenosyl-L-homocysteine"
            ],
            [
                "Q02127-1",
                "protein_xref_rhea",
                "30187",
                "(S)-dihydroorotate + a quinone = a quinol + orotate"
            ],
            [
                "Q9Y295-1",
                "protein_xref_rhea",
                "19669",
                "GTP + H2O = GDP + H(+) + phosphate"
            ],
            [
                "P20132-1",
                "protein_xref_rhea",
                "19169",
                "L-serine = NH4(+) + pyruvate"
            ],
            [
                "P20132-1",
                "protein_xref_rhea",
                "22108",
                "L-threonine = 2-oxobutanoate + NH4(+)"
            ],
            [
                "Q8IYD8-1",
                "protein_xref_rhea",
                "13065",
                "ATP + H2O = ADP + H(+) + phosphate"
            ],
            [
                "P24903-1",
                "protein_xref_rhea",
                "17149",
                "an organic molecule + O2 + reduced [NADPH--hemoprotein reductase] = an alcohol + H(+) + H2O + oxidized [NADPH--hemoprotein reductase]"
            ],
            [
                "P49447-1",
                "protein_xref_rhea",
                "66524",
                "L-ascorbate(in) + monodehydro-L-ascorbate radical(out) = L-ascorbate(out) + monodehydro-L-ascorbate radical(in)"
            ],
            [
                "O95342-1",
                "protein_xref_rhea",
                "50048",
                "ATP + cholate(in) + H2O = ADP + cholate(out) + H(+) + phosphate"
            ],
            [
                "O95342-1",
                "protein_xref_rhea",
                "50052",
                "ATP + H2O + taurocholate(in) = ADP + H(+) + phosphate + taurocholate(out)"
            ],
            [
                "O95342-1",
                "protein_xref_rhea",
                "50056",
                "ATP + glycocholate(in) + H2O = ADP + glycocholate(out) + H(+) + phosphate"
            ],
            [
                "O95342-1",
                "protein_xref_rhea",
                "50060",
                "ATP + glycochenodeoxycholate(in) + H2O = ADP + glycochenodeoxycholate(out) + H(+) + phosphate"
            ],
            [
                "O95342-1",
                "protein_xref_rhea",
                "50064",
                "ATP + H2O + taurochenodeoxycholate(in) = ADP + H(+) + phosphate + taurochenodeoxycholate(out)"
            ],
            [
                "O95342-1",
                "protein_xref_rhea",
                "50068",
                "ATP + glycoursodeoxycholate(in) + H2O = ADP + glycoursodeoxycholate(out) + H(+) + phosphate"
            ],
            [
                "O95342-1",
                "protein_xref_rhea",
                "50072",
                "ATP + H2O + tauroursodeoxycholate(in) = ADP + H(+) + phosphate + tauroursodeoxycholate(out)"
            ],
            [
                "O95342-1",
                "protein_xref_rhea",
                "63908",
                "ATP + H2O + pravastatin(in) = ADP + H(+) + phosphate + pravastatin(out)"
            ],
            [
                "Q92820-1",
                "protein_xref_rhea",
                "56784",
                "(6S)-5,6,7,8-tetrahydrofolyl-(gamma-L-Glu)n + (n-1) H2O = (6S)-5,6,7,8-tetrahydrofolate + (n-1) L-glutamate"
            ],
            [
                "P13807-1",
                "protein_xref_rhea",
                "18549",
                "[(1->4)-alpha-D-glucosyl](n) + UDP-alpha-D-glucose = [(1->4)-alpha-D-glucosyl](n+1) + H(+) + UDP"
            ],
            [
                "Q00973-1",
                "protein_xref_rhea",
                "12588",
                "ganglioside GM3 (d18:1(4E)) + UDP-N-acetyl-alpha-D-galactosamine = ganglioside GM2 (d18:1(4E)) + H(+) + UDP"
            ],
            [
                "Q00973-1",
                "protein_xref_rhea",
                "41816",
                "ganglioside GD3 (d18:1(4E)) + UDP-N-acetyl-alpha-D-galactosamine = ganglioside GD2 (d18:1(4E)) + H(+) + UDP"
            ],
            [
                "Q00973-1",
                "protein_xref_rhea",
                "43268",
                "ganglioside GM3 + UDP-N-acetyl-alpha-D-galactosamine = ganglioside GM2 + H(+) + UDP"
            ],
            [
                "Q00973-1",
                "protein_xref_rhea",
                "43272",
                "ganglioside GD3 + UDP-N-acetyl-alpha-D-galactosamine = ganglioside GD2 + H(+) + UDP"
            ],
            [
                "Q00973-1",
                "protein_xref_rhea",
                "47564",
                "a beta-D-Gal-(1->4)-beta-D-Glc-(1<->1)-Cer(d18:1(4E)) + UDP-N-acetyl-alpha-D-galactosamine = ganglioside GA2 (d18:1(4E)) + H(+) + UDP"
            ],
            [
                "Q00973-1",
                "protein_xref_rhea",
                "62516",
                "beta-D-galactosyl-(1->4)-beta-D-glucosyl-(1<->1)-ceramide + UDP-N-acetyl-alpha-D-galactosamine = H(+) + N-acetyl-beta-D-galactosaminyl-(1->4)-beta-D-galactosyl-(1->4)-beta-D-glucosyl-(1<->1')-ceramide + UDP"
            ],
            [
                "Q00973-1",
                "protein_xref_rhea",
                "43276",
                "ganglioside GD1a + UDP-N-acetyl-alpha-D-galactosamine = ganglioside GalNAc-GD1a + H(+) + UDP"
            ],
            [
                "Q00973-1",
                "protein_xref_rhea",
                "47580",
                "ganglioside GT3 (d18:1(4E)) + UDP-N-acetyl-alpha-D-galactosamine = ganglioside GT2 (d18:1(4E)) + H(+) + UDP"
            ],
            [
                "Q00973-1",
                "protein_xref_rhea",
                "43300",
                "alpha-N-glycoloylneuraminosyl-(2->3)-beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->3)-beta-D-galactosyl-(1->4)-beta-D-glucosyl-(1<->1')-ceramide + UDP-N-acetyl-alpha-D-galactosamine = H(+) + N-acetyl-beta-D-galactosaminyl-(1->4)-[alpha-N-glycoloylneuraminosyl-(2->3)]-beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->3)-beta-D-galactosyl-(1->4)-beta-D-glucosyl-(1<->1')-ceramide + UDP"
            ],
            [
                "O60507-1",
                "protein_xref_rhea",
                "16801",
                "3'-phosphoadenylyl sulfate + L-tyrosyl-[protein] = adenosine 3',5'-bisphosphate + H(+) + O-sulfo-L-tyrosine-[protein]"
            ],
            [
                "Q13427-1",
                "protein_xref_rhea",
                "16237",
                "[protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)"
            ],
            [
                "Q9NV23-1",
                "protein_xref_rhea",
                "16645",
                "H2O + hexadecanoyl-CoA = CoA + H(+) + hexadecanoate"
            ],
            [
                "Q9NV23-1",
                "protein_xref_rhea",
                "30135",
                "dodecanoyl-CoA + H2O = CoA + dodecanoate + H(+)"
            ],
            [
                "Q9NV23-1",
                "protein_xref_rhea",
                "40059",
                "decanoyl-CoA + H2O = CoA + decanoate + H(+)"
            ],
            [
                "Q9NV23-1",
                "protein_xref_rhea",
                "40119",
                "H2O + tetradecanoyl-CoA = CoA + H(+) + tetradecanoate"
            ],
            [
                "Q9NV23-1",
                "protein_xref_rhea",
                "15057",
                "(9Z)-octadecenoyl-[ACP] + H2O = (9Z)-octadecenoate + H(+) + holo-[ACP]"
            ],
            [
                "Q969I3-1",
                "protein_xref_rhea",
                "18469",
                "an acyl-CoA + L-glutamine = an N(2)-acyl-L-glutamine + CoA + H(+)"
            ],
            [
                "P45983-1",
                "protein_xref_rhea",
                "17989",
                "ATP + L-seryl-[protein] = ADP + H(+) + O-phospho-L-seryl-[protein]"
            ],
            [
                "P45983-1",
                "protein_xref_rhea",
                "46608",
                "ATP + L-threonyl-[protein] = ADP + H(+) + O-phospho-L-threonyl-[protein]"
            ],
            [
                "P16671-1",
                "protein_xref_rhea",
                "33655",
                "(9Z)-octadecenoate(out) = (9Z)-octadecenoate(in)"
            ],
            [
                "P16671-1",
                "protein_xref_rhea",
                "45256",
                "hexadecanoate(out) = hexadecanoate(in)"
            ],
            [
                "P16671-1",
                "protein_xref_rhea",
                "45264",
                "(9Z,12Z)-octadecadienoate(out) = (9Z,12Z)-octadecadienoate(in)"
            ],
            [
                "P16671-1",
                "protein_xref_rhea",
                "45248",
                "butanoate(out) = butanoate(in)"
            ],
            [
                "P16671-1",
                "protein_xref_rhea",
                "45252",
                "tetradecanoate(out) = tetradecanoate(in)"
            ],
            [
                "P16671-1",
                "protein_xref_rhea",
                "45260",
                "tetracosanoate(out) = tetracosanoate(in)"
            ],
            [
                "P11362-1",
                "protein_xref_rhea",
                "10596",
                "ATP + L-tyrosyl-[protein] = ADP + H(+) + O-phospho-L-tyrosyl-[protein]"
            ],
            [
                "Q9NUN7-1",
                "protein_xref_rhea",
                "20856",
                "an N-acylsphing-4-enine + H2O = a fatty acid + sphing-4-enine"
            ]
        ]
    },
    "readme": "Name\n   - Human UniProtKB Xref Rhea\n\nVersion\n   - 1.10.6\n\nCreated on\n  - 2021-10-15T06:33:28.159541\n\nModified on\n   - \n\nCreated by\n   -  [jeetvora@gwu.edu]\n\nAuthors\n   - \n\nChecksum\n   - \n\nUsability Domain\n   - The Human UniProtKB Xref Rhea contains human [taxid:9606] UniProtKB canonical accessions cross-referenced to Rhea database accessions/identifiers. The dataset is derived from 2019-09 UniProtKB release. If you use this dataset please provide proper attribution to EMBL-EBI-UniProtKB and GlyGen\n   - Rhea\n\nDescription Domain\n   Keywords\n   - reactions\n   - Rhea\n   - cross-reference\n\n   Pipeline Steps\n   - Step-1: The script loads the UniProtKB canonical accessions that are cross-referenced to Rhea database accessions/identifiers from the triplestore containing triples from nt file and extracts the data as a csv dataset\n\nExecution Domain\n   Scripts   - https://github.com/GW-HIVE/glygen-backend-integration/blob/master/pipeline/integrator/make-protein-dataset.py\n\n\n   Software Prerequisites\n      Name: Python\n      Version: 2.7.5\n      URI: https://www.python.org/download/releases/2.7.5/\n\nI/O Domain\n   Input Subdomain\n      Name: uniprot-proteome-homo-sapiens.nt\n      URI: https://data.glygen.org/ln2wwwdata/source/uniprot-proteome-homo-sapiens.nt\n      Name: human_protein_masterlist.csv\n      URI: https://data.glygen.org/ln2wwwdata/reviewed/human_protein_masterlist.csv\n   Output Subdomain\n      Name: human_protein_xref_rhea.csv\n      URI: http://data.glygen.org/ln2wwwdata/reviewed/human_protein_xref_rhea.csv\n      Name: human_protein_xref_rhea.stat.csv\n      URI: http://data.glygen.org/ln2wwwdata/reviewed/human_protein_xref_rhea.stat.csv",
    "downloadurl": "/ln2data/releases/data/v-1.10.6/reviewed/human_protein_xref_rhea.csv"
}