[ { "title": "Global Analysis of O-GlcNAc Glycoproteins in Activated Human T Cells.", "journal": "Journal of immunology (Baltimore, Md. : 1950)", "date": "2016", "authors": "Lund PJ, Elias JE, Davis MM", "reference": { "type": "PubMed", "id": "27655845", "url": "https://pubmed.ncbi.nlm.nih.gov/27655845" }, "referenced_glycans": [ { "glytoucan_ac": "G49108TO" } ], "referenced_proteins": [ { "uniprot_canonical_ac": "P62917-1", "protein_name": "Large ribosomal subunit protein uL2", "gene_name": "RPL8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31629-1", "protein_name": "Transcription factor HIVEP2", "gene_name": "HIVEP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16666-1", "protein_name": "Gamma-interferon-inducible protein 16", "gene_name": "IFI16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N8A2-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B", "gene_name": "ANKRD44", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09666-1", "protein_name": "Neuroblast differentiation-associated protein AHNAK", "gene_name": "AHNAK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12778-1", "protein_name": "Forkhead box protein O1", "gene_name": "FOXO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13428-1", "protein_name": "Treacle protein", "gene_name": "TCOF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14497-1", "protein_name": "AT-rich interactive domain-containing protein 1A", "gene_name": "ARID1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12956-1", "protein_name": "DNA repair protein Ku70", "gene_name": "XRCC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z6Z7-1", "protein_name": "E3 ubiquitin-protein ligase HUWE1", "gene_name": "HUWE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWZ3-1", "protein_name": "Ankyrin repeat and KH domain-containing protein 1", "gene_name": "ANKHD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P4R8-1", "protein_name": "Nuclear factor related to kappa-B-binding protein", "gene_name": "NFRKB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4A3-1", "protein_name": "Serine/threonine-protein kinase WNK1", "gene_name": "WNK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35658-1", "protein_name": "Nuclear pore complex protein Nup214", "gene_name": "NUP214", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39023-1", "protein_name": "Large ribosomal subunit protein uL3", "gene_name": "RPL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NF50-1", "protein_name": "Dedicator of cytokinesis protein 8", "gene_name": "DOCK8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19838-1", "protein_name": "Nuclear factor NF-kappa-B p105 subunit", "gene_name": "NFKB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23743-1", "protein_name": "Diacylglycerol kinase alpha", "gene_name": "DGKA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BSJ8-1", "protein_name": "Extended synaptotagmin-1", "gene_name": "ESYT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC38-1", "protein_name": "Glyoxalase domain-containing protein 4", "gene_name": "GLOD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23246-1", "protein_name": "Splicing factor, proline- and glutamine-rich", "gene_name": "SFPQ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51812-1", "protein_name": "Ribosomal protein S6 kinase alpha-3", "gene_name": "RPS6KA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49750-4", "protein_name": "YLP motif-containing protein 1", "gene_name": "YLPM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57737-1", "protein_name": "Coronin-7", "gene_name": "CORO7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PK6-1", "protein_name": "RNA-binding protein 14", "gene_name": "RBM14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30740-1", "protein_name": "Leukocyte elastase inhibitor", "gene_name": "SERPINB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NTZ6-1", "protein_name": "RNA-binding protein 12", "gene_name": "RBM12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NDX5-1", "protein_name": "Polyhomeotic-like protein 3", "gene_name": "PHC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5T8P6-1", "protein_name": "RNA-binding protein 26", "gene_name": "RBM26", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14859-1", "protein_name": "POU domain, class 2, transcription factor 1", "gene_name": "POU2F1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96M27-1", "protein_name": "Protein PRRC1", "gene_name": "PRRC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "A3KN83-1", "protein_name": "Protein strawberry notch homolog 1", "gene_name": "SBNO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95487-1", "protein_name": "Protein transport protein Sec24B", "gene_name": "SEC24B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UQ35-1", "protein_name": "Serine/arginine repetitive matrix protein 2", "gene_name": "SRRM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63HN8-3", "protein_name": "E3 ubiquitin-protein ligase RNF213", "gene_name": "RNF213", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42331-1", "protein_name": "Rho GTPase-activating protein 25", "gene_name": "ARHGAP25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0E3-1", "protein_name": "Histone deacetylase complex subunit SAP130", "gene_name": "SAP130", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q29RF7-1", "protein_name": "Sister chromatid cohesion protein PDS5 homolog A", "gene_name": "PDS5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JSL3-1", "protein_name": "Dedicator of cytokinesis protein 11", "gene_name": "DOCK11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92945-1", "protein_name": "Far upstream element-binding protein 2", "gene_name": "KHSRP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6VMQ6-1", "protein_name": "Activating transcription factor 7-interacting protein 1", "gene_name": "ATF7IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32519-1", "protein_name": "ETS-related transcription factor Elf-1", "gene_name": "ELF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z2W4-1", "protein_name": "Zinc finger CCCH-type antiviral protein 1", "gene_name": "ZC3HAV1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01082-1", "protein_name": "Spectrin beta chain, non-erythrocytic 1", "gene_name": "SPTBN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUJ2-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein U-like protein 1", "gene_name": "HNRNPUL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z589-1", "protein_name": "BRCA2-interacting transcriptional repressor EMSY", "gene_name": "EMSY", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01196-1", "protein_name": "Runt-related transcription factor 1", "gene_name": "RUNX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WUM4-1", "protein_name": "Programmed cell death 6-interacting protein", "gene_name": "PDCD6IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IX12-1", "protein_name": "Cell division cycle and apoptosis regulator protein 1", "gene_name": "CCAR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHR5-1", "protein_name": "SAP30-binding protein", "gene_name": "SAP30BP", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75400-1", "protein_name": "Pre-mRNA-processing factor 40 homolog A", "gene_name": "PRPF40A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H3S7-1", "protein_name": "Tyrosine-protein phosphatase non-receptor type 23", "gene_name": "PTPN23", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L576-1", "protein_name": "Cytoplasmic FMR1-interacting protein 1", "gene_name": "CYFIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43143-1", "protein_name": "ATP-dependent RNA helicase DHX15", "gene_name": "DHX15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13492-1", "protein_name": "Phosphatidylinositol-binding clathrin assembly protein", "gene_name": "PICALM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y520-1", "protein_name": "Protein PRRC2C", "gene_name": "PRRC2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08AF3-1", "protein_name": "Schlafen family member 5", "gene_name": "SLFN5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KR1-1", "protein_name": "Zinc finger RNA-binding protein", "gene_name": "ZFR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01543-1", "protein_name": "Friend leukemia integration 1 transcription factor", "gene_name": "FLI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63096-1", "protein_name": "Guanine nucleotide-binding protein G(i) subunit alpha-1", "gene_name": "GNAI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14119-1", "protein_name": "Vascular endothelial zinc finger 1", "gene_name": "VEZF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15365-1", "protein_name": "Poly(rC)-binding protein 1", "gene_name": "PCBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45880-3", "protein_name": "Non-selective voltage-gated ion channel VDAC2", "gene_name": "VDAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04439-1", "protein_name": "HLA class I histocompatibility antigen, A alpha chain", "gene_name": "HLA-A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00610-1", "protein_name": "Clathrin heavy chain 1", "gene_name": "CLTC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02545-1", "protein_name": "Prelamin-A/C", "gene_name": "LMNA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UI08-1", "protein_name": "Ena/VASP-like protein", "gene_name": "EVL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVL2-1", "protein_name": "Nucleoporin p58/p45", "gene_name": "NUP58", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52597-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein F", "gene_name": "HNRNPF", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01844-1", "protein_name": "RNA-binding protein EWS", "gene_name": "EWSR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50995-1", "protein_name": "Annexin A11", "gene_name": "ANXA11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78527-1", "protein_name": "DNA-dependent protein kinase catalytic subunit", "gene_name": "PRKDC", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5YKK6-1", "protein_name": "CCR4-NOT transcription complex subunit 1", "gene_name": "CNOT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99439-1", "protein_name": "Calponin-2", "gene_name": "CNN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49790-1", "protein_name": "Nuclear pore complex protein Nup153", "gene_name": "NUP153", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95466-1", "protein_name": "Formin-like protein 1", "gene_name": "FMNL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48147-1", "protein_name": "Prolyl endopeptidase", "gene_name": "PREP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z3K3-1", "protein_name": "Pogo transposable element with ZNF domain", "gene_name": "POGZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49792-1", "protein_name": "E3 SUMO-protein ligase RanBP2", "gene_name": "RANBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17655-1", "protein_name": "Calpain-2 catalytic subunit", "gene_name": "CAPN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q04637-1", "protein_name": "Eukaryotic translation initiation factor 4 gamma 1", "gene_name": "EIF4G1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55265-1", "protein_name": "Double-stranded RNA-specific adenosine deaminase", "gene_name": "ADAR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15459-1", "protein_name": "Splicing factor 3A subunit 1", "gene_name": "SF3A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL46-1", "protein_name": "Proteasome activator complex subunit 2", "gene_name": "PSME2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06323-1", "protein_name": "Proteasome activator complex subunit 1", "gene_name": "PSME1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43243-1", "protein_name": "Matrin-3", "gene_name": "MATR3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07814-1", "protein_name": "Bifunctional glutamate/proline--tRNA ligase", "gene_name": "EPRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50453-1", "protein_name": "Serpin B9", "gene_name": "SERPINB9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52948-1", "protein_name": "Nuclear pore complex protein Nup98-Nup96", "gene_name": "NUP98", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2X3-1", "protein_name": "Nucleolar protein 58", "gene_name": "NOP58", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14157-2", "protein_name": "Ubiquitin-associated protein 2-like", "gene_name": "UBAP2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y277-1", "protein_name": "Non-selective voltage-gated ion channel VDAC3", "gene_name": "VDAC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43670-1", "protein_name": "BUB3-interacting and GLEBS motif-containing protein ZNF207", "gene_name": "ZNF207", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09382-1", "protein_name": "Galectin-1", "gene_name": "LGALS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RK0-1", "protein_name": "Protein capicua homolog", "gene_name": "CIC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14739-1", "protein_name": "Delta(14)-sterol reductase LBR", "gene_name": "LBR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43403-1", "protein_name": "Tyrosine-protein kinase ZAP-70", "gene_name": "ZAP70", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q03518-1", "protein_name": "Antigen peptide transporter 1", "gene_name": "TAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14980-1", "protein_name": "Nuclear mitotic apparatus protein 1", "gene_name": "NUMA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXV6-1", "protein_name": "CDKN2A-interacting protein", "gene_name": "CDKN2AIP", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14974-1", "protein_name": "Protein phosphatase 1 regulatory subunit 12A", "gene_name": "PPP1R12A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z3B4-1", "protein_name": "Nucleoporin p54", "gene_name": "NUP54", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75376-1", "protein_name": "Nuclear receptor corepressor 1", "gene_name": "NCOR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TAQ2-1", "protein_name": "SWI/SNF complex subunit SMARCC2", "gene_name": "SMARCC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15942-1", "protein_name": "Zyxin", "gene_name": "ZYX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46063-1", "protein_name": "ATP-dependent DNA helicase Q1", "gene_name": "RECQL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14005-1", "protein_name": "Pro-interleukin-16", "gene_name": "IL16", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14317-1", "protein_name": "Hematopoietic lineage cell-specific protein", "gene_name": "HCLS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14866-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein L", "gene_name": "HNRNPL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12270-1", "protein_name": "Nucleoprotein TPR", "gene_name": "TPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "B0I1T2-1", "protein_name": "Unconventional myosin-Ig", "gene_name": "MYO1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96L91-1", "protein_name": "E1A-binding protein p400", "gene_name": "EP400", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N393-1", "protein_name": "Zinc finger protein 786", "gene_name": "ZNF786", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15637-1", "protein_name": "Splicing factor 1", "gene_name": "SF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07339-1", "protein_name": "Cathepsin D", "gene_name": "CTSD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI9-1", "protein_name": "Transcriptional repressor p66-beta", "gene_name": "GATAD2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99714-1", "protein_name": "3-hydroxyacyl-CoA dehydrogenase type-2", "gene_name": "HSD17B10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61978-1", "protein_name": 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"total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] } ]