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Malicki J, Neuhauss S C, Abbas L, Weaver M, Driever W, Solnica-Krezel L", "reference": { "type": "PubMed", "id": "9808788", "url": "https://pubmed.ncbi.nlm.nih.gov/9808788" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8UVJ6-1", "protein_name": "Vang-like protein 2", "gene_name": "vangl2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AB13AAR4-1", "protein_name": "H2.0-like homeobox protein", "gene_name": "hlx1", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q8UVJ6", "url": "https://www.uniprot.org/uniprotkb/Q8UVJ6" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.9808788", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 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Commun.", "date": "2022", "authors": "Zhao Fangying, He Jiangyong, Tang Jun, Cui Nianfei, Shi Yanyan, Li Zhifan, Liu Shengnan, Wang Yazhou, Ma Ming, Zhao Congjian, Luo Lingfei, Li Li", "reference": { "type": "PubMed", "id": "36253375", "url": "https://pubmed.ncbi.nlm.nih.gov/36253375" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8UWJ4-1", "protein_name": "Delta-like protein D", "gene_name": "dld", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q8UWJ4", "url": "https://www.uniprot.org/uniprotkb/Q8UWJ4" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.36253375", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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Genet.", "date": "1998", "authors": "van Eeden F J, Holley S A, Haffter P, N\u00fcsslein-Volhard C", "reference": { "type": "PubMed", "id": "9706695", "url": "https://pubmed.ncbi.nlm.nih.gov/9706695" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8UWJ4-1", "protein_name": "Delta-like protein D", "gene_name": "dld", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q8UWJ4", "url": "https://www.uniprot.org/uniprotkb/Q8UWJ4" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.9706695", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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Dyn.", "date": "1995", "authors": "Thisse B, Thisse C, Weston J A", "reference": { "type": "PubMed", "id": "8589434", "url": "https://pubmed.ncbi.nlm.nih.gov/8589434" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q90413-1", "protein_name": "Fibroblast growth factor receptor 4", "gene_name": "fgfr4", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q90413", "url": "https://www.uniprot.org/uniprotkb/Q90413" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.8589434", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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J. Dev. Biol.", "date": "1999", "authors": "Sass J B, Martin C C, Krone P H", "reference": { "type": "PubMed", "id": "10707908", "url": "https://pubmed.ncbi.nlm.nih.gov/10707908" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q90474-1", "protein_name": "Heat shock protein HSP 90-alpha 1", "gene_name": "hsp90a.1", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q90474", "url": "https://www.uniprot.org/uniprotkb/Q90474" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.10707908", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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Physiol.", "date": "2003", "authors": "Du Shao Jun, Gao Jie, Anyangwe Victor", "reference": { "type": "PubMed", "id": "12524040", "url": "https://pubmed.ncbi.nlm.nih.gov/12524040" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q90477-1", "protein_name": "Myoblast determination protein 1 homolog", "gene_name": "myod1", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q90477", "url": "https://www.uniprot.org/uniprotkb/Q90477" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.12524040", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of adult alpha- and beta-globin genes in the zebrafish.", "journal": "Blood", "date": "1997", "authors": "Chan F Y, Robinson J, Brownlie A, Shivdasani R A, Donovan A, Brugnara C, Kim J, Lau B C, Witkowska H E, Zon L I", "reference": { "type": "PubMed", "id": "9002973", "url": "https://pubmed.ncbi.nlm.nih.gov/9002973" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q90485-1", "protein_name": "Hemoglobin subunit beta-2", "gene_name": "ba2l; ba2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q90486-1", "protein_name": "Hemoglobin subunit beta-1", "gene_name": "ba1l; ba1", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q90485", "url": "https://www.uniprot.org/uniprotkb/Q90485" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" 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Repressor.", "journal": "Development (Cambridge, England)", "date": "1998-11", "authors": "Becker T S, Burgess S M, Amsterdam A H, Allende M L, Hopkins N", "reference": { "type": "PubMed", "id": "9778497", "url": "https://pubmed.ncbi.nlm.nih.gov/9778497" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q90X44-2", "protein_name": "Nuclear respiratory factor 1", "gene_name": "nrf1", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q90X44", "url": "https://www.uniprot.org/uniprotkb/Q90X44" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.9778497", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The orphan G protein-coupled receptor 161 is required for left-right patterning.", "journal": "Developmental biology", "date": "2008-11-01", "authors": "Leung Tinchung, Humbert Jasper E, Stauffer Anna M, Giger Kathryn E, Chen Hui, Tsai Huai-Jen, Wang Chuan, Mirshahi Tooraj, Robishaw Janet D", "reference": { "type": "PubMed", "id": "18755178", "url": "https://pubmed.ncbi.nlm.nih.gov/18755178" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q90X46-1", "protein_name": "G 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification and spatiotemporal expression of gpr161 genes in zebrafish.", "journal": "Gene", "date": "2020", "authors": "Wang Min, Li Ping, Wang Hao, Dong Lina, Wu Changxin, Zhao Zhonghua", "reference": { "type": "PubMed", "id": "31884103", "url": "https://pubmed.ncbi.nlm.nih.gov/31884103" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q90X46-1", "protein_name": "G protein-coupled receptor 161B", "gene_name": "gpr161b", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FAM4-1", "protein_name": "G protein-coupled receptor 161B", "gene_name": "gpr161a", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M2BFX4-1", "protein_name": "DDB1- and CUL4-associated factor 6 isoform X1", "gene_name": "dcaf6", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q90X46", "url": "https://www.uniprot.org/uniprotkb/Q90X46" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.31884103", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { 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"Feedback control of the Gpr161-G\u03b1s-PKA axis contributes to basal Hedgehog repression in zebrafish.", "journal": "Development (Cambridge, England)", "date": "2021-02-17", "authors": "Tschaikner Philipp M, Regele Dominik, R\u00f6ck Ruth, Salvenmoser Willi, Meyer Dirk, Bouvier Michel, Geley Stephan, Stefan Eduard, Aanstad Pia", "reference": { "type": "PubMed", "id": "33531430", "url": "https://pubmed.ncbi.nlm.nih.gov/33531430" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q90X46-1", "protein_name": "G protein-coupled receptor 161B", "gene_name": "gpr161b", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FAM4-1", "protein_name": "G protein-coupled receptor 161B", "gene_name": "gpr161a", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q90X46", "url": "https://www.uniprot.org/uniprotkb/Q90X46" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", 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W, Obara T, Kuida S, Lehoczky J, Dewar K, Drummond IA, Beier DR", "reference": { "type": "PubMed", "id": "12421721", "url": "https://pubmed.ncbi.nlm.nih.gov/12421721" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q90XC2-1", "protein_name": "Serine/threonine-protein kinase Nek8", "gene_name": "nek8", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q91ZR4-1", "protein_name": "Serine/threonine-protein kinase Nek8", "gene_name": "Nek8", "tax_name": "Mouse" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q90XC2", "url": "https://www.uniprot.org/uniprotkb/Q90XC2" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "mutagenesis": [ { "start_pos": 33, "end_pos": 33, "sequence_org": "K", "sequence_mut": "M", "comment": "Results in enlarged multinucleated cells.", "evidence": [ { "database": "UniProtKB", "id": "Q91ZR4", "url": 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Dyn.", "date": "2001", "authors": "Babb S G, Barnett J, Doedens A L, Cobb N, Liu Q, Sorkin B C, Yelick P C, Raymond P A, Marrs J A", "reference": { "type": "PubMed", "id": "11376490", "url": "https://pubmed.ncbi.nlm.nih.gov/11376490" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q90Z37-1", "protein_name": "Cadherin-1", "gene_name": "cdh1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "P24257-1", "protein_name": "Protein Wnt-1", "gene_name": "wnt1", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q90Z37", "url": "https://www.uniprot.org/uniprotkb/Q90Z37" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.11376490", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Plakoglobin has both structural and signalling roles in zebrafish development.", "journal": "Dev. 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chromosome 16q causing Bardet-Biedl syndrome (BBS2).", "journal": "Hum. 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Dev.", "date": "2001", "authors": "Girard F, Cr\u00e9mazy F, Berta P, Renucci A", "reference": { "type": "PubMed", "id": "11118886", "url": "https://pubmed.ncbi.nlm.nih.gov/11118886" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9DDD7-1", "protein_name": "Transcription factor Sox-19b", "gene_name": "sox19b", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q9DDD7", "url": "https://www.uniprot.org/uniprotkb/Q9DDD7" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.11118886", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Zebrafish acetylcholinesterase is encoded by a single gene localized on linkage group 7. gene structure and polymorphism; molecular forms and expression pattern during development.", "journal": "J. Biol. Chem.", "date": "2001", "authors": "Bertrand C, Chatonnet A, Takke C, Yan Y L, Postlethwait J, Toutant J P, Cousin X", "reference": { "type": "PubMed", "id": "11016933", "url": "https://pubmed.ncbi.nlm.nih.gov/11016933" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9DDE3-1", "protein_name": "Acetylcholinesterase", "gene_name": "ache", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AB12XWH9-1", "protein_name": "Carboxylic ester hydrolase", "gene_name": "cel.2", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q9DDE3", "url": "https://www.uniprot.org/uniprotkb/Q9DDE3" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.11016933", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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Dell'era Patrizia, Buraschi Simone, Mitola Stefania, Foglia Efrem, van Loenen Pieter B, Alewijnse Astrid E, Presta Marco", "reference": { "type": "PubMed", "id": "22837470", "url": "https://pubmed.ncbi.nlm.nih.gov/22837470" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9DDK4-1", "protein_name": "Sphingosine 1-phosphate receptor 1", "gene_name": "s1pr1", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q9DDK4", "url": "https://www.uniprot.org/uniprotkb/Q9DDK4" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.22837470", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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Dev.", "date": "2001", "authors": "Topczewska J M, Topczewski J, Solnica-Krezel L, Hogan B L", "reference": { "type": "PubMed", "id": "11165495", "url": "https://pubmed.ncbi.nlm.nih.gov/11165495" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9DE24-1", "protein_name": "Forkhead box C1-B", "gene_name": "foxc1b", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9DE25-1", "protein_name": "Forkhead box C1-A", "gene_name": "foxc1a", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q9DE24", "url": "https://www.uniprot.org/uniprotkb/Q9DE24" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.11165495", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": 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"protein_name": "Forkhead box C1-B", "gene_name": "foxc1b", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9DE25-1", "protein_name": "Forkhead box C1-A", "gene_name": "foxc1a", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IN60-1", "protein_name": "Fibroblast growth factor", "gene_name": "fgf19", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q9DE24", "url": "https://www.uniprot.org/uniprotkb/Q9DE24" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.17000708", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A zebrafish sox9 gene required for cartilage morphogenesis.", "journal": "Development", "date": "2002", "authors": "Yan Yi-Lin, Miller Craig T, Nissen Robert M, Singer Amy, Liu Dong, Kirn Anette, Draper Bruce, Willoughby John, Morcos Paul A, Amsterdam Adam, Chung Bon-Chu, Westerfield Monte, Haffter Pascal, Hopkins Nancy, Kimmel Charles, Postlethwait John H, Nissen Robert", "reference": { "type": "PubMed", "id": "12397114", "url": "https://pubmed.ncbi.nlm.nih.gov/12397114" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9DFH2-1", "protein_name": "Transcription factor SOX-9a", "gene_name": "sox9a", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q9DFH2", "url": "https://www.uniprot.org/uniprotkb/Q9DFH2" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.12397114", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { 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"field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mutagenesis study on the zebra fish SOX9 high-mobility group: comparison of sequence and non-sequence specific HMG domains.", "journal": "Biochemistry", "date": "2003", "authors": "Hsiao Nai-Wan, Samuel Dharmaraj, Liu Yu-Nan, Chen Li-Chuan, Yang Tzu-Ying, Jayaraman Gurunathan, Lyu Ping-Chiang", "reference": { "type": "PubMed", "id": "14503868", "url": "https://pubmed.ncbi.nlm.nih.gov/14503868" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9DFH2-1", "protein_name": "Transcription factor SOX-9a", "gene_name": "sox9a", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q9DFH2", "url": "https://www.uniprot.org/uniprotkb/Q9DFH2" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.14503868", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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J. Mol. Sci.", "date": "2024", "authors": "Song Wenjie, Xia Xin, Fan Yue, Zhang Bo, Chen Xiaowei", "reference": { "type": "PubMed", "id": "38731925", "url": "https://pubmed.ncbi.nlm.nih.gov/38731925" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9DFH2-1", "protein_name": "Transcription factor SOX-9a", "gene_name": "sox9a", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1R5S7-1", "protein_name": "Forkhead box protein D3", "gene_name": "foxd3", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "P50574-1", "protein_name": "Homeobox protein Dlx2a", "gene_name": "dlx2a", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "P30260-1", "protein_name": "Cell division cycle protein 27 homolog", "gene_name": "CDC27", "tax_name": "Human" }, { "uniprot_canonical_ac": "F1R8Z0-1", "protein_name": "Growth arrest and DNA damage-inducible protein GADD45 alpha", "gene_name": "gadd45aa", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A1D5NSV4-1", "protein_name": "Crestin", "gene_name": "crestin", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q9DFH2", "url": "https://www.uniprot.org/uniprotkb/Q9DFH2" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.38731925", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "FBLN2 is associated with Goldenhar syndrome and is essential for cranial neural crest cell development.", "journal": "Ann. N. Y. Acad. Sci.", "date": "2024", "authors": "Chen X., Gu W., Zhang F., Zhang B., Niu X.", "reference": { "type": "PubMed", "id": "38970771", "url": "https://pubmed.ncbi.nlm.nih.gov/38970771" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9DFH2-1", "protein_name": "Transcription factor SOX-9a", "gene_name": "sox9a", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1R5S7-1", "protein_name": "Forkhead box protein D3", "gene_name": "foxd3", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "P50574-1", "protein_name": "Homeobox protein Dlx2a", "gene_name": "dlx2a", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A1D5NSV4-1", "protein_name": "Crestin", "gene_name": "crestin", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q9DFH2", "url": "https://www.uniprot.org/uniprotkb/Q9DFH2" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.38970771", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The metalloproteinase PAPP-A is required for IGF-dependent chondrocyte differentiation and organization.", "journal": "Sci. Rep.", "date": "2024", "authors": "Oxvig C., Thomsen J.S., Fenton R.A., Fuchtbauer E.M., Kjaer-Sorensen K., Harboe M., Bruel A.", "reference": { "type": "PubMed", "id": "39215168", "url": "https://pubmed.ncbi.nlm.nih.gov/39215168" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9DFH2-1", "protein_name": "Transcription factor SOX-9a", "gene_name": "sox9a", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A2RQR3-1", "protein_name": "Collagen, type X, alpha 1a precursor", "gene_name": "col10a1a", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q9DFH2", "url": "https://www.uniprot.org/uniprotkb/Q9DFH2" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], "record_id": "pubmed.39215168", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { 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0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Gridlock signalling pathway fashions the first embryonic artery.", "journal": "Nature", "date": "2001-11-08", "authors": "Zhong T P, Childs S, Leu J P, Fishman M C", "reference": { "type": "PubMed", "id": "11700560", "url": "https://pubmed.ncbi.nlm.nih.gov/11700560" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9I9L0-1", "protein_name": "Hairy/enhancer-of-split related with YRPW 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Genes Evol.", "date": "2003", "authors": "Winkler Christoph, Elmasri Harun, Klamt Barbara, Volff Jean-Nicolas, Gessler Manfred", "reference": { "type": "PubMed", "id": "14593478", "url": "https://pubmed.ncbi.nlm.nih.gov/14593478" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9I9L0-1", "protein_name": "Hairy/enhancer-of-split related with YRPW motif protein 2", "gene_name": "hey2", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q8AXV5-1", "protein_name": "Hairy/enhancer-of-split related with YRPW motif-like protein", "gene_name": "heyl", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q8AXV6-1", "protein_name": "Hairy/enhancer-of-split related with YRPW motif protein 1", "gene_name": "hey1", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q9I9L0", "url": "https://www.uniprot.org/uniprotkb/Q9I9L0" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", 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"date": "2003", "authors": "Masumoto J, Zhou W, Chen FF, Su F, Kuwada JY, Hidaka E, Katsuyama T, Sagara J, Taniguchi S, Ngo-Hazelett P, Postlethwait JH, Nunez G, Inohara N", "reference": { "type": "PubMed", "id": "12464617", "url": "https://pubmed.ncbi.nlm.nih.gov/12464617" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9I9L7-1", "protein_name": "Caspase a", "gene_name": "caspa", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9I9N6-1", "protein_name": "Apoptosis-associated speck-like protein containing a CARD", "gene_name": "pycard", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q504J1-1", "protein_name": "Caspase b", "gene_name": "caspb", "tax_name": "Zebrafish" } ], "species": [ { "name": "Danio rerio", "taxid": 7955, "evidence": [ { "database": "UniProtKB", "id": "Q9I9L7", "url": "https://www.uniprot.org/uniprotkb/Q9I9L7" } ], "common_name": "Zebrafish", "glygen_name": "Zebrafish", "reference_species": "Danio rerio [7955]" } ], 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