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Sci.", "date": "1980", "authors": "Cohen S N, Chang A C, Nakanishi S, Inoue A, Kita T, Nakamura M, Numa S", "reference": { "type": "PubMed", "id": "6249166", "url": "https://pubmed.ncbi.nlm.nih.gov/6249166" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01190-1", "protein_name": "Pro-opiomelanocortin", "gene_name": "POMC", "tax_name": "Bovine" } ], "species": [ { "name": "Bos taurus", "taxid": 9913, "evidence": [ { "database": "UniProtKB", "id": "P01190", "url": "https://www.uniprot.org/uniprotkb/P01190" } ], "common_name": "Bovine", "glygen_name": "Bovine", "reference_species": "Bos taurus [9913]" } ], "record_id": "pubmed.6249166", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Isolation and characterization of the bovine corticotropin/beta-lipotropin precursor gene.", "journal": "Eur. J. Biochem.", "date": "1981", "authors": "Nakanishi S, Teranishi Y, Watanabe Y, Notake M, Noda M, Kakidani H, Jingami H, Numa S", "reference": { "type": "PubMed", "id": "6263630", "url": "https://pubmed.ncbi.nlm.nih.gov/6263630" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01190-1", "protein_name": "Pro-opiomelanocortin", "gene_name": "POMC", "tax_name": "Bovine" } ], "species": [ { "name": "Bos taurus", "taxid": 9913, "evidence": [ { "database": "UniProtKB", "id": "P01190", "url": "https://www.uniprot.org/uniprotkb/P01190" } ], "common_name": "Bovine", "glygen_name": "Bovine", "reference_species": "Bos taurus [9913]" } ], "record_id": "pubmed.6263630", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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that modulates its catalytic properties.", "journal": "The Journal of biological chemistry", "date": "2006-03-03", "authors": "Pentia Dana C, Hosier Suzanne, Cote Rick H", "reference": { "type": "PubMed", "id": "16407240", "url": "https://pubmed.ncbi.nlm.nih.gov/16407240" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q28181-6", "protein_name": "Cyclic nucleotide-gated channel beta-1", "gene_name": "CNGB1", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "Q14028-1", "protein_name": "Cyclic nucleotide-gated channel beta-1", "gene_name": "CNGB1", "tax_name": "Human" } ], "species": [ { "name": "Bos taurus", "taxid": 9913, "evidence": [ { "database": "UniProtKB", "id": "Q28181", "url": "https://www.uniprot.org/uniprotkb/Q28181" } ], "common_name": "Bovine", "glygen_name": "Bovine", "reference_species": "Bos taurus [9913]" } ], "record_id": "pubmed.16407240", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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U.S.A.", "date": "1991", "authors": "Sugimoto Y, Yatsunami K, Tsujimoto M, Khorana H G, Ichikawa A", "reference": { "type": "PubMed", "id": "2014230", "url": "https://pubmed.ncbi.nlm.nih.gov/2014230" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q28181-6", "protein_name": "Cyclic nucleotide-gated channel beta-1", "gene_name": "CNGB1", "tax_name": "Bovine" } ], "species": [ { "name": "Bos taurus", "taxid": 9913, "evidence": [ { "database": "UniProtKB", "id": "Q28181", "url": "https://www.uniprot.org/uniprotkb/Q28181" } ], "common_name": "Bovine", "glygen_name": "Bovine", "reference_species": "Bos taurus [9913]" } ], "record_id": "pubmed.2014230", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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"sequence_mut": "A", "comment": "No effect on topology, but loss of activity; when associated with A-70.", "evidence": [ { "database": "UniProtKB", "id": "A8MQA5", "url": "https://www.uniprot.org/uniprotkb/A8MQA5" }, { "database": "PubMed", "id": "24723605", "url": "https://pubmed.ncbi.nlm.nih.gov/24723605" } ], "uniprot_canonical_ac": "A8MQA5-1" }, { "start_pos": 58, "end_pos": 58, "sequence_org": "C", "sequence_mut": "", "comment": "Disrupted topology and loss of activity; when associated with C-41-DEL.", "evidence": [ { "database": "UniProtKB", "id": "A8MQA5", "url": "https://www.uniprot.org/uniprotkb/A8MQA5" }, { "database": "PubMed", "id": "24723605", "url": "https://pubmed.ncbi.nlm.nih.gov/24723605" } ], "uniprot_canonical_ac": "A8MQA5-1" }, { "start_pos": 59, "end_pos": 59, "sequence_org": "C", "sequence_mut": "", "comment": "Disrupted topology and loss of activity; when associated with C-69-DEL.", "evidence": [ { "database": "UniProtKB", "id": "A8MQA5", "url": "https://www.uniprot.org/uniprotkb/A8MQA5" }, { "database": "PubMed", "id": "24723605", "url": "https://pubmed.ncbi.nlm.nih.gov/24723605" } ], "uniprot_canonical_ac": "A8MQA5-1" }, { "start_pos": 69, "end_pos": 69, "sequence_org": "C", "sequence_mut": "", "comment": "Disrupted topology and loss of activity; when associated with C-59-DEL.", "evidence": [ { "database": "UniProtKB", "id": "A8MQA5", "url": "https://www.uniprot.org/uniprotkb/A8MQA5" }, { "database": "PubMed", "id": "24723605", "url": "https://pubmed.ncbi.nlm.nih.gov/24723605" } ], "uniprot_canonical_ac": "A8MQA5-1" }, { "start_pos": 70, "end_pos": 70, "sequence_org": "W", "sequence_mut": "A", "comment": "No effect on topology, but loss of activity; when associated with A-57.", "evidence": [ { "database": "UniProtKB", "id": "A8MQA5", "url": "https://www.uniprot.org/uniprotkb/A8MQA5" }, { "database": "PubMed", "id": "24723605", "url": "https://pubmed.ncbi.nlm.nih.gov/24723605" } ], "uniprot_canonical_ac": "A8MQA5-1" }, { "start_pos": 82, "end_pos": 82, "sequence_org": "C", "sequence_mut": "", "comment": "Disrupted topology and loss of activity; when associated with C-56-DEL.", "evidence": [ { "database": "UniProtKB", "id": "A8MQA5", "url": "https://www.uniprot.org/uniprotkb/A8MQA5" }, { "database": "PubMed", "id": "24723605", "url": "https://pubmed.ncbi.nlm.nih.gov/24723605" } ], "uniprot_canonical_ac": "A8MQA5-1" }, { "start_pos": 86, "end_pos": 86, "sequence_org": "C", "sequence_mut": "", "comment": "Disrupted topology and loss of activity; when associated with C-46-DEL.", "evidence": [ { "database": "UniProtKB", "id": "A8MQA5", "url": "https://www.uniprot.org/uniprotkb/A8MQA5" }, { "database": "PubMed", "id": "24723605", "url": "https://pubmed.ncbi.nlm.nih.gov/24723605" } ], "uniprot_canonical_ac": "A8MQA5-1" } ], "record_id": "pubmed.24723605", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 14 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis ribonucleotide reductases are critical for cell cycle progression, DNA damage repair, and plant development.", "journal": "Plant Cell", "date": "2006", "authors": "Wang Chunxin, Liu Zhongchi", "reference": { "type": "PubMed", "id": "16399800", "url": "https://pubmed.ncbi.nlm.nih.gov/16399800" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P0DKH2-1", "protein_name": "Putative ribonucleoside-diphosphate reductase small chain B", "gene_name": "RNR2B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSD0-1", "protein_name": "Ribonucleoside-diphosphate reductase small chain C", "gene_name": "TSO2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P50651-1", "protein_name": "Ribonucleoside-diphosphate reductase small chain A", "gene_name": "RNR2A", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P0DKH2", "url": "https://www.uniprot.org/uniprotkb/P0DKH2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 170, "end_pos": 170, "sequence_org": "G", "sequence_mut": "S", "comment": "In tso2-2; white sectors in green organs, uneven thickness, rough surfaces, and irregular margins of leaves or floral organs.", "evidence": [ { "database": "UniProtKB", "id": "Q9LSD0", "url": "https://www.uniprot.org/uniprotkb/Q9LSD0" }, { "database": "PubMed", "id": "16399800", "url": "https://pubmed.ncbi.nlm.nih.gov/16399800" } ], "uniprot_canonical_ac": "Q9LSD0-1" }, { "start_pos": 49, "end_pos": 49, "sequence_org": "D", "sequence_mut": "N", "comment": "In tso2-1,4; white sectors in green organs, uneven thickness, rough surfaces, and irregular margins of leaves or floral organs.", "evidence": [ { "database": "UniProtKB", "id": "Q9LSD0", "url": "https://www.uniprot.org/uniprotkb/Q9LSD0" }, { "database": "PubMed", "id": "16399800", "url": "https://pubmed.ncbi.nlm.nih.gov/16399800" } ], "uniprot_canonical_ac": "Q9LSD0-1" }, { "start_pos": 97, "end_pos": 97, "sequence_org": "R", "sequence_mut": "C", "comment": "In tso2-3; white sectors in green organs, uneven thickness, rough surfaces, and irregular margins of leaves or floral organs.", "evidence": [ { "database": "UniProtKB", "id": "Q9LSD0", "url": "https://www.uniprot.org/uniprotkb/Q9LSD0" }, { "database": "PubMed", "id": "16399800", "url": "https://pubmed.ncbi.nlm.nih.gov/16399800" } ], "uniprot_canonical_ac": "Q9LSD0-1" } ], "record_id": "pubmed.16399800", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Primary transcripts of microRNAs encode regulatory peptides.", "journal": "Nature", "date": "2015-04-02", "authors": "Lauressergues Dominique, Couzigou Jean-Malo, Clemente H\u00e9l\u00e8ne San, Martinez Yves, Dunand Christophe, B\u00e9card Guillaume, Combier Jean-Philippe", "reference": { "type": "PubMed", "id": "25807486", "url": "https://pubmed.ncbi.nlm.nih.gov/25807486" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P0DKI9-1", "protein_name": "Peptide encoded by miPEP165a", "gene_name": "miPEP165a", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DKJ0-1", "protein_name": "Peptide encoded by miPEP160b", "gene_name": "miPEP160b", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DKJ1-1", "protein_name": "Peptide encoded by miPEP164a", "gene_name": "miPEP164a", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DKJ2-1", "protein_name": "Peptide encoded by miPEP319a", "gene_name": "miPEP319a", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P0DKI9", "url": "https://www.uniprot.org/uniprotkb/P0DKI9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.25807486", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Analysis of Arabidopsis genome sequence reveals a large new gene family in plants.", "journal": "Plant Mol. Biol.", "date": "1999", "authors": "Ride J P, Davies E M, Franklin F C, Marshall D F", "reference": { "type": "PubMed", "id": "10344198", "url": "https://pubmed.ncbi.nlm.nih.gov/10344198" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P0DN92-1", "protein_name": "S-protein homolog 24", "gene_name": "SPH24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DN93-1", "protein_name": "S-protein homolog 29", "gene_name": "SPH29", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DN94-1", "protein_name": "S-protein homolog 17", "gene_name": "SPH17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLY6-1", "protein_name": "S-protein homolog 15", "gene_name": "SPH15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMQ4-1", "protein_name": "S-protein homolog 3", "gene_name": "SPH3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJ82-1", "protein_name": "S-protein homolog 32", "gene_name": 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"SPH12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GX02-1", "protein_name": "S-protein homolog 14", "gene_name": "SPH14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FF19-1", "protein_name": "S-protein homolog 9", "gene_name": "SPH9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FI83-1", "protein_name": "S-protein homolog 28", "gene_name": "SPH28", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FI84-1", "protein_name": "S-protein homolog 27", "gene_name": "SPH27", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIV3-1", "protein_name": "S-protein homolog 25", "gene_name": "SPH25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJ04-1", "protein_name": "S-protein homolog 26", "gene_name": "SPH26", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F2Q9V4-1", "protein_name": "S-protein homolog 6", "gene_name": "SPH6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": 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"gene_name": "MT2A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38805-1", "protein_name": "Metallothionein-like protein 2B", "gene_name": "MT2B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22433-1", "protein_name": "Metallothionein-like protein 3", "gene_name": "MT3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P43392-1", "protein_name": "Metallothionein-like protein 1A", "gene_name": "MT1A", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P25860", "url": "https://www.uniprot.org/uniprotkb/P25860" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.24635746", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": 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0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structure, organization and expression of the metallothionein gene family in Arabidopsis.", "journal": "Mol. Gen. Genet.", "date": "1995", "authors": "Zhou J, Goldsbrough P B", "reference": { "type": "PubMed", "id": "7565594", "url": "https://pubmed.ncbi.nlm.nih.gov/7565594" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P25860-1", "protein_name": "Metallothionein-like protein 2A", "gene_name": "MT2A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38803-1", "protein_name": "Putative metallothionein-like protein 1B", "gene_name": "MT1B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38804-1", "protein_name": "Metallothionein-like protein 1C", "gene_name": "MT1C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38805-1", "protein_name": "Metallothionein-like protein 2B", "gene_name": "MT2B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P43392-1", "protein_name": "Metallothionein-like protein 1A", "gene_name": "MT1A", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P25860", "url": "https://www.uniprot.org/uniprotkb/P25860" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.7565594", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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[] } ] }, { "title": "Transcripts of metallothionein genes in Arabidopsis thaliana.", "journal": "DNA Seq.", "date": "1995", "authors": "Yeh S C, Hsieh H M, Huang P C", "reference": { "type": "PubMed", "id": "7612924", "url": "https://pubmed.ncbi.nlm.nih.gov/7612924" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P25860-1", "protein_name": "Metallothionein-like protein 2A", "gene_name": "MT2A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P43392-1", "protein_name": "Metallothionein-like protein 1A", "gene_name": "MT1A", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P25860", "url": "https://www.uniprot.org/uniprotkb/P25860" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.7612924", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": 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Biol.", "date": "1992", "authors": "Rouse D, Gehring C A, Parish R W", "reference": { "type": "PubMed", "id": "1623199", "url": "https://pubmed.ncbi.nlm.nih.gov/1623199" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P25863-1", "protein_name": "Dehydrin Xero 1", "gene_name": "XERO1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P25863", "url": "https://www.uniprot.org/uniprotkb/P25863" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.1623199", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Nucleotide sequence and expression of a novel glycine-rich protein gene from Arabidopsis thaliana.", "journal": "Plant Mol. Biol.", "date": "1991", "authors": "Quigley F, Villiot M L, Mache R", "reference": { "type": "PubMed", "id": "1912511", "url": "https://pubmed.ncbi.nlm.nih.gov/1912511" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P27483-1", "protein_name": "Glycine-rich cell wall structural protein", "gene_name": "K14A17.12", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P27483", "url": "https://www.uniprot.org/uniprotkb/P27483" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.1912511", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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"Cloning of two gibberellin-regulated cDNAs from Arabidopsis thaliana by subtractive hybridization: expression of the tonoplast water channel, gamma-TIP, is increased by GA3.", "journal": "Plant Mol. 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Biol.", "date": "2001", "authors": "Schmitz-Linneweber C, Maier R M, Alcaraz J P, Cottet A, Herrmann R G, Mache R", "reference": { "type": "PubMed", "id": "11292076", "url": "https://pubmed.ncbi.nlm.nih.gov/11292076" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P56809-1", "protein_name": "Uncharacterized protein ycf15", "gene_name": "ycf15-A; ycf15-B", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P56809", "url": "https://www.uniprot.org/uniprotkb/P56809" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11292076", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Y3IP1, a nucleus-encoded thylakoid protein, cooperates with the plastid-encoded Ycf3 protein in photosystem I assembly of tobacco and Arabidopsis.", "journal": "Plant Cell", "date": "2010", "authors": "Albus Christin A, Ruf Stephanie, Sch\u00f6ttler Mark Aurel, Lein Wolfgang, Kehr Julia, Bock Ralph", "reference": { "type": "PubMed", "id": "20807881", "url": "https://pubmed.ncbi.nlm.nih.gov/20807881" }, "referenced_glycans": [], "referenced_proteins": [ { 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Small cysteine-rich peptides resembling antimicrobial peptides have been under-predicted in plants.", "journal": "Plant J.", "date": "2007", "authors": "Silverstein Kevin A T, Moskal William A, Wu Hank C, Underwood Beverly A, Graham Michelle A, Town Christopher D, VandenBosch Kathryn A", "reference": { "type": "PubMed", "id": "17565583", "url": "https://pubmed.ncbi.nlm.nih.gov/17565583" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P82621-1", "protein_name": "Defensin-like protein 226", "gene_name": "SCRL2", "tax_name": "Mouse-ear cress" }, { 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"Defensin-like protein 106", "gene_name": "T13M11.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q2L6T6-1", "protein_name": "Defensin-like protein 286", "gene_name": "F13B4; F21F23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q2V315-1", "protein_name": "Defensin-like protein 285", "gene_name": "K21C13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q2V371-1", "protein_name": "Defensin-like protein 24", "gene_name": "MQK4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q2V4A3-1", "protein_name": "Defensin-like protein 293", "gene_name": "F1O13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q2V4F4-1", "protein_name": "Defensin-like protein 269", "gene_name": "F22C12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q2V4G3-1", "protein_name": "Defensin-like protein 117", "gene_name": "T15M6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q2V4G5-1", "protein_name": "Defensin-like protein 199", "gene_name": "F25P12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q2V4G6-1", "protein_name": "Defensin-like protein 81", "gene_name": "F14G9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q2V4H7-1", "protein_name": "Defensin-like protein 175", "gene_name": "F14J22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q2V4I2-1", "protein_name": "Defensin-like protein 289", "gene_name": "T3F24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q2V4I8-1", "protein_name": "Defensin-like protein 32", "gene_name": "F15O4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q2V4J5-1", "protein_name": "Defensin-like protein 43", "gene_name": "F6N18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q2V4N2-1", "protein_name": "Defensin-like protein 201", "gene_name": "F10B6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q2V4N6-1", "protein_name": "Defensin-like protein 268", "gene_name": "F13B4; F21F23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3E6U0-1", "protein_name": "Defensin-like protein 100", "gene_name": "T10I14.9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0CAN7-1", "protein_name": "V-type proton ATPase subunit E3", "gene_name": "VHA-E3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P82789-1", "protein_name": "Defensin-like protein 181", "gene_name": "PDF3.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S8H9-1", "protein_name": "Defensin-like protein 144", "gene_name": "LCR10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0CAY5-1", "protein_name": "Defensin-like protein 166", "gene_name": "F19C24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0CAY8-1", "protein_name": "Defensin-like protein 292", "gene_name": "F3C11; F3L12", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P82621", "url": "https://www.uniprot.org/uniprotkb/P82621" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17565583", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 36 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The subtelomeric region of the Arabidopsis thaliana chromosome IIIR contains potential genes and duplicated fragments from other chromosomes.", "journal": "Plant Mol. Biol.", "date": "2010", "authors": "Wang Chi-Ting, Ho Chia-Hsing, Hseu Ming-Jhy, Chen Chung-Mong", "reference": { "type": "PubMed", "id": "20652368", "url": "https://pubmed.ncbi.nlm.nih.gov/20652368" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P82658-1", "protein_name": "Thylakoid lumenal 19 kDa protein, chloroplastic", "gene_name": "TEL3S", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "E0X9N4-1", "protein_name": "Putative RING-type E3 ubiquitin transferase C3H69", "gene_name": "", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P82658", "url": "https://www.uniprot.org/uniprotkb/P82658" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.20652368", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Control of final seed and organ size by the DA1 gene family in Arabidopsis thaliana.", "journal": "Genes Dev.", "date": "2008", "authors": "Li Yunhai, Zheng Leiying, Corke Fiona, Smith Caroline, Bevan Michael W", "reference": { "type": "PubMed", "id": "18483219", "url": "https://pubmed.ncbi.nlm.nih.gov/18483219" }, 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Biol.", "date": "2008", "authors": "Ivanov Rumen, Tiedemann Jens, Czihal Andreas, Schallau Anna, Diep Le Hong, Mock Hans-Peter, Claus Bernhard, Tewes Annegret, B\u00e4umlein Helmut", "reference": { "type": "PubMed", "id": "17991462", "url": "https://pubmed.ncbi.nlm.nih.gov/17991462" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FJT6-1", "protein_name": "Protein EFFECTOR OF TRANSCRIPTION 3", "gene_name": "ET3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K933-1", "protein_name": "Protein EFFECTOR OF TRANSCRIPTION 2", "gene_name": "ET2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JU69-1", "protein_name": "Protein EFFECTOR OF TRANSCRIPTION 1", "gene_name": "ET1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FJT6", "url": "https://www.uniprot.org/uniprotkb/Q9FJT6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 103, "end_pos": 103, "sequence_org": "R", "sequence_mut": "A", "comment": "Defective in GIY-YIG domain.", "evidence": [ { "database": "UniProtKB", "id": "F4K933", "url": "https://www.uniprot.org/uniprotkb/F4K933" }, { "database": "PubMed", "id": "17991462", "url": "https://pubmed.ncbi.nlm.nih.gov/17991462" } ], "uniprot_canonical_ac": "F4K933-1" } ], "record_id": "pubmed.17991462", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 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"reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16262706", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 8 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 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and K homology (KH) domain RNA-binding proteins from the flowering plant Arabidopsis thaliana.", "journal": "Nucleic Acids Res.", "date": "2002", "authors": "Lorkovi\u0107 Zdravko J, Barta Andrea", "reference": { "type": "PubMed", "id": "11809873", "url": "https://pubmed.ncbi.nlm.nih.gov/11809873" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FKT4-1", "protein_name": "KH domain-containing protein At5g56140", "gene_name": "MDA7.20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q03250-1", "protein_name": "Glycine-rich RNA-binding protein 7", "gene_name": "CCR2; RBG7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIX3-1", "protein_name": "Probable glycine-rich RNA-binding protein 1", "gene_name": "RBG1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WLR1-1", "protein_name": "KH domain-containing protein At4g26480", "gene_name": "M3E9.90", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": 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mitochondrial", "gene_name": "RBG3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LIS2-1", "protein_name": "Glycine-rich RNA-binding protein 4, mitochondrial", "gene_name": "RBG4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q03251-1", "protein_name": "Glycine-rich RNA-binding protein 8", "gene_name": "RBG8; RBGA6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVM8-1", "protein_name": "Glycine-rich RNA-binding protein 2, mitochondrial", "gene_name": "RBG2; RBGA5", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FKT4", "url": "https://www.uniprot.org/uniprotkb/Q9FKT4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11809873", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 14 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structure and expression of three src2 homologues and a novel subfamily of flavoprotein monooxygenase genes revealed by the analysis of a 25kb fragment from Arabidopsis thaliana chromosome IV.", "journal": "Gene", "date": "1999", "authors": "Aubourg S, Picaud A, Kreis M, Lecharny A", "reference": { "type": "PubMed", "id": "10216258", "url": "https://pubmed.ncbi.nlm.nih.gov/10216258" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FLC2-1", "protein_name": "Monooxygenase 3", "gene_name": "MO3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04023-1", "protein_name": "Protein SRC2 homolog", "gene_name": "SRC2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81815-1", "protein_name": "Monooxygenase 1", "gene_name": "MO1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81816-1", "protein_name": "Monooxygenase 2", "gene_name": "MO2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FLC2", "url": "https://www.uniprot.org/uniprotkb/Q9FLC2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.10216258", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": 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"count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis homolog of the yeast TREX-2 mRNA export complex: components and anchoring nucleoporin.", "journal": "Plant J.", "date": "2010", "authors": "Lu Qing, Tang Xurong, Tian Gang, Wang Fang, Liu Kede, Nguyen Vi, Kohalmi Susanne E, Keller Wilfred A, Tsang Edward W T, Harada John J, Rothstein Steven J, Cui Yuhai", "reference": { "type": "PubMed", "id": "19843313", "url": "https://pubmed.ncbi.nlm.nih.gov/19843313" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FLK4-1", "protein_name": "Flavin-containing monooxygenase FMO GS-OX-like 8", "gene_name": "MFB13.9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JAU2-1", "protein_name": "SAC3 family protein B", "gene_name": "SAC3B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23184-1", "protein_name": "Calcium-binding protein CML19", "gene_name": "CEN2; CML19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82659-1", "protein_name": "Probable calcium-binding protein CML20", "gene_name": "CML20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q67XV2-1", "protein_name": "SAC3 family protein C", "gene_name": "SAC3C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IUY8-1", "protein_name": "SAC3 family protein A", "gene_name": "SAC3A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GWE6-1", "protein_name": "Enhanced ethylene response protein 5", "gene_name": "EER5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CAF4-1", "protein_name": "Nuclear pore complex protein NUP1", "gene_name": "NUP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FL96-1", "protein_name": "Protein DSS1 HOMOLOG ON CHROMOSOME V", "gene_name": "DSS1(V)", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80452-1", "protein_name": "AMP deaminase", "gene_name": "AMPD", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFF2-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase", "gene_name": "UCH1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NQ54-1", "protein_name": "Transcription and mRNA export factor ENY2", "gene_name": "ENY2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FLK4", "url": "https://www.uniprot.org/uniprotkb/Q9FLK4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19843313", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 12 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The COBRA family of putative GPI-anchored proteins in Arabidopsis. A new fellowship in expansion.", "journal": "Plant Physiol.", "date": "2002", "authors": "Roudier Fran\u00e7ois, Schindelman Gary, DeSalle Rob, Benfey Philip N", "reference": { "type": "PubMed", "id": "12376623", "url": "https://pubmed.ncbi.nlm.nih.gov/12376623" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FME5-1", "protein_name": "COBRA-like protein 5", "gene_name": "COBL5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LIB6-1", "protein_name": "COBRA-like protein 8", "gene_name": "COBL8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRT7-1", "protein_name": "COBRA-like protein 1", "gene_name": "COBL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94KT8-1", "protein_name": "Protein COBRA", "gene_name": "COB", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T045-1", "protein_name": "COBRA-like protein 11", "gene_name": "COBL11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GZ17-1", "protein_name": "COBRA-like protein 7", "gene_name": "COBL7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04500-1", "protein_name": "COBRA-like protein 6", "gene_name": "COBL6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L8Q7-1", "protein_name": "COBRA-like protein 2", "gene_name": "COBL2; COBL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJU0-1", "protein_name": "COBRA-like protein 10", "gene_name": "COBL10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LFW3-1", "protein_name": "COBRA-like protein 4", "gene_name": "COBL4; IRX6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJ13-1", "protein_name": "COBRA-like protein 9", "gene_name": "COBL9", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FME5", "url": "https://www.uniprot.org/uniprotkb/Q9FME5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12376623", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 11 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of Arabidopsis and rice DWD proteins and their roles as substrate receptors for CUL4-RING E3 ubiquitin ligases.", "journal": "Plant Cell", "date": "2008", "authors": "Lee Jae-Hoon, Terzaghi William, Gusmaroli Giuliana, Charron Jean-Benoit F, Yoon Hye-Jin, Chen Haodong, He Yizhou Joseph, Xiong Yue, Deng Xing Wang", "reference": { "type": "PubMed", "id": "18223036", "url": "https://pubmed.ncbi.nlm.nih.gov/18223036" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FMU5-1", "protein_name": "U3 small nucleolar RNA-associated protein 18 homolog", "gene_name": "MUA22.5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M0V3-1", "protein_name": "DNA damage-binding protein 1a", "gene_name": "DDB1A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22785-1", "protein_name": "Pre-mRNA-processing factor 19 homolog 2", "gene_name": "MAC3B; PRP19B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4KB17-1", "protein_name": "Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.3", "gene_name": "KTN80.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22467-1", "protein_name": "Histone-binding protein MSI1", "gene_name": "MSI1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22607-1", "protein_name": "WD-40 repeat-containing protein MSI4", "gene_name": "MSI4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38997-2", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN10", "gene_name": "KIN10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q42384-1", "protein_name": "Protein pleiotropic regulatory locus 1", "gene_name": "PRL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T014-1", "protein_name": "Protein SPA1-RELATED 2", "gene_name": "SPA2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZUN8-1", "protein_name": "Protein HEAT STRESS TOLERANT DWD 1", "gene_name": "HTD1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38942-1", "protein_name": "Protein RAE1", "gene_name": "RAE1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39190-1", "protein_name": "Protein pleiotropic regulator PRL2", "gene_name": "PRL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22468-1", "protein_name": "WD-40 repeat-containing protein MSI2", "gene_name": "MSI2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H0T9-1", "protein_name": "Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4", "gene_name": "KTN80.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LGH4-1", "protein_name": "Cullin-4", "gene_name": "CUL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VYZ5-1", "protein_name": "Periodic tryptophan protein 2", "gene_name": "PWP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJR3-1", "protein_name": "Protein SPA1-RELATED 3", "gene_name": "SPA3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94BM7-1", "protein_name": "Protein SPA1-RELATED 4", "gene_name": "SPA4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P49177-1", "protein_name": "Guanine nucleotide-binding protein subunit beta", "gene_name": "AGB1; GB1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYX2-1", "protein_name": "Protein SUPPRESSOR OF PHYA-105 1", "gene_name": "SPA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94BQ3-1", "protein_name": "Protein ALTERED SEED GERMINATION 2", "gene_name": "ASG2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLX9-1", "protein_name": "Notchless protein homolog", "gene_name": "NLE1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NQ88-1", "protein_name": "Protein DAMAGED DNA-BINDING 2", "gene_name": "DDB2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1P8AW69-1", "protein_name": "Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.1", "gene_name": "KTN80.1; KTN801", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HTH8-1", "protein_name": "Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.2", "gene_name": "KTN80.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P43254-1", "protein_name": "E3 ubiquitin-protein ligase COP1", "gene_name": "COP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22469-1", "protein_name": "WD-40 repeat-containing protein MSI3", "gene_name": "MSI3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SU78-1", "protein_name": "WD-40 repeat-containing protein MSI5", "gene_name": "MSI5; NFC5", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FMU5", "url": "https://www.uniprot.org/uniprotkb/Q9FMU5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.18223036", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 28 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Epistasis and balanced polymorphism influencing complex trait variation.", "journal": "Nature", "date": "2005", "authors": "Kroymann Juergen, Mitchell-Olds Thomas", "reference": { "type": "PubMed", "id": "15875023", "url": "https://pubmed.ncbi.nlm.nih.gov/15875023" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FMY4-1", "protein_name": "Uncharacterized protein At5g23160", "gene_name": "MKD15.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMY3-1", "protein_name": "Serine/threonine-protein kinase-like protein At5g23170", "gene_name": "MKD15.3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FMY4", "url": "https://www.uniprot.org/uniprotkb/Q9FMY4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15875023", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "cis-Jasmone induces Arabidopsis genes that affect the chemical ecology of multitrophic interactions with aphids and their parasitoids.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "2008", "authors": "Bruce Toby J A, Matthes Michaela C, Chamberlain Keith, Woodcock Christine M, Mohib Abdul, Webster Ben, Smart Lesley E, Birkett Michael A, Pickett John A, Napier Johnathan A", "reference": { "type": "PubMed", "id": "18356298", "url": "https://pubmed.ncbi.nlm.nih.gov/18356298" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LUC8-1", "protein_name": "Cytochrome P450 72A13", "gene_name": "CYP72A13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FPF0-1", "protein_name": "Protein DJ-1 homolog A", "gene_name": "DJ1A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LHA1-1", "protein_name": "Cytochrome P450 81D11", "gene_name": "CYP81D11", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LUC8", "url": "https://www.uniprot.org/uniprotkb/Q9LUC8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.18356298", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "chy1, an Arabidopsis mutant with impaired beta-oxidation, is defective in a peroxisomal beta-hydroxyisobutyryl-CoA hydrolase.", "journal": "J. Biol. Chem.", "date": "2001", "authors": "Zolman B K, Monroe-Augustus M, Thompson B, Hawes J W, Krukenberg K A, Matsuda S P, Bartel B", "reference": { "type": "PubMed", "id": "11404361", "url": "https://pubmed.ncbi.nlm.nih.gov/11404361" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LK08-1", "protein_name": "3-hydroxyisobutyryl-CoA hydrolase-like protein 4, mitochondrial", "gene_name": "K7M2.21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SHJ8-1", "protein_name": "3-hydroxyisobutyryl-CoA hydrolase-like protein 5", "gene_name": "F12K11.12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T0K7-1", "protein_name": "3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial", "gene_name": "T9E8.100", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RXN4-1", "protein_name": "Small ribosomal subunit protein mS47", "gene_name": "F11C18.10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1PEY5-1", 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"GDSL esterase/lipase 4", "gene_name": "GLIP4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSA7-1", "protein_name": "GDSL esterase/lipase 5", "gene_name": "GLIP5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYF5-1", "protein_name": "GDSL esterase/lipase 3", "gene_name": "GLIP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LFJ9-1", "protein_name": "GDSL esterase/lipase 7", "gene_name": "GLIP7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C996-1", "protein_name": "GDSL esterase/lipase 6", "gene_name": "GLIP6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLN0-1", "protein_name": "GDSL esterase/lipase 1", "gene_name": "GLIP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYF0-1", "protein_name": "GDSL esterase/lipase 2", "gene_name": "GLIP2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LJP1", "url": "https://www.uniprot.org/uniprotkb/Q9LJP1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16126835", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A comprehensive analysis of the La-motif protein superfamily.", "journal": "RNA", "date": "2009", "authors": "Bousquet-Antonelli C, Deragon JM", "reference": { "type": "PubMed", "id": "19299548", "url": "https://pubmed.ncbi.nlm.nih.gov/19299548" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LHL3-1", "protein_name": "La-related protein 6C", "gene_name": "LARP6C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94K80-1", "protein_name": "La-related protein 1C", "gene_name": "LARP1C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RWR2-1", "protein_name": "La-related protein 1B", "gene_name": "LARP1B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94A38-1", "protein_name": "La-related protein 6A", "gene_name": "LARP6A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80567-1", "protein_name": "La-related protein 6B", "gene_name": "LARP6B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0V7U7-1", "protein_name": "La protein 2", "gene_name": "LA2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q940X9-1", "protein_name": "La-related protein 1A", "gene_name": "LARP1A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93ZV7-1", "protein_name": "La protein 1", "gene_name": "LA1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LHL3", "url": "https://www.uniprot.org/uniprotkb/Q9LHL3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19299548", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 8 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A subgroup of SGS3-like proteins act redundantly in RNA-directed DNA methylation.", "journal": "Nucleic acids research", "date": "2012-05", "authors": "Xie Meng, Ren Guodong, Costa-Nunes Pedro, Pontes Olga, Yu Bin", "reference": { "type": "PubMed", "id": "22302148", "url": "https://pubmed.ncbi.nlm.nih.gov/22302148" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LHB1-1", "protein_name": "Factor of DNA methylation 3", "gene_name": "FDM3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LMH6-1", "protein_name": "Factor of DNA methylation 4", "gene_name": "FDM4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JH53-1", "protein_name": "Factor of DNA methylation 2", "gene_name": "FDM2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SAI1-1", "protein_name": "Factor of DNA methylation 5", "gene_name": "FDM5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S9P3-1", "protein_name": "Factor of DNA methylation 1", "gene_name": "FDM1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LHB1", "url": "https://www.uniprot.org/uniprotkb/Q9LHB1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.22302148", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Arabidopsis putative selenium-binding protein family: expression study and characterization of SBP1 as a potential new player in cadmium detoxification processes.", "journal": "Plant Physiol.", "date": "2008", "authors": "Dutilleul Christelle, Jourdain Agn\u00e8s, Bourguignon Jacques, Hugouvieux V\u00e9ronique", "reference": { "type": "PubMed", "id": "18354042", "url": "https://pubmed.ncbi.nlm.nih.gov/18354042" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LK38-1", "protein_name": "Selenium-binding protein 3", "gene_name": "SBP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23264-1", "protein_name": "Selenium-binding protein 1", "gene_name": "SBP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93WN0-1", "protein_name": "Selenium-binding protein 2", "gene_name": "SBP2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LK38", "url": "https://www.uniprot.org/uniprotkb/Q9LK38" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.18354042", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular characterization of a novel gene family encoding ACT domain repeat proteins in Arabidopsis.", "journal": "Plant physiology", "date": "2002-12", "authors": "Hsieh Ming-Hsiun, Goodman Howard M", "reference": { "type": "PubMed", "id": "12481063", "url": "https://pubmed.ncbi.nlm.nih.gov/12481063" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LNA5-1", "protein_name": "ACT domain-containing protein ACR8", "gene_name": "ACR8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZPQ8-1", "protein_name": "ACT domain-containing protein ACR5", "gene_name": "ACR5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LJW3-1", "protein_name": "ACT domain-containing protein ACR4", "gene_name": "ACR4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LJW1-1", "protein_name": "ACT domain-containing protein ACR7", "gene_name": "ACR7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHP1-1", "protein_name": "ACT domain-containing protein ACR1", "gene_name": "ACR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JWR0-1", "protein_name": "ACT domain-containing protein ACR2", "gene_name": "ACR2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49285-1", "protein_name": "ACT domain-containing protein ACR3", "gene_name": "ACR3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SGA0-1", "protein_name": "ACT domain-containing protein ACR6", "gene_name": "ACR6", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LNA5", "url": "https://www.uniprot.org/uniprotkb/Q9LNA5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12481063", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 8 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 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"field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis contains nine long-chain acyl-coenzyme A synthetase genes that participate in fatty acid and glycerolipid metabolism.", "journal": "Plant Physiol.", "date": "2002", "authors": "Shockey Jay M, Fulda Martin S, Browse John A", "reference": { "type": "PubMed", "id": "12177484", "url": "https://pubmed.ncbi.nlm.nih.gov/12177484" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LPK6-1", "protein_name": "Probable acyl-activating enzyme 9", "gene_name": "AEE9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LQS1-1", "protein_name": "Probable acyl-activating enzyme 8", "gene_name": "AAE8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HUK6-1", "protein_name": "Butanoate--CoA ligase AAE1", "gene_name": "AAE1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CAP8-1", "protein_name": "Long chain acyl-CoA synthetase 9, chloroplastic", "gene_name": "LACS9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T009-1", "protein_name": "Long chain acyl-CoA synthetase 5", "gene_name": "LACS5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SMT7-1", "protein_name": "Oxalate--CoA ligase", "gene_name": "AAE3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W471-1", "protein_name": "Long-chain-fatty-acid--[acyl-carrier-protein] ligase AEE15, chloroplastic", "gene_name": "AAE15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SEY5-1", "protein_name": "Isovalerate--CoA ligase AAE2", "gene_name": "AAE2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJD4-1", "protein_name": "Long chain acyl-CoA synthetase 8", "gene_name": "LACS8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T0A0-1", "protein_name": "Long chain acyl-CoA synthetase 4", "gene_name": "LACS4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFE6-1", "protein_name": "Probable acyl-activating enzyme 5, peroxisomal", "gene_name": "AAE5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFE9-1", "protein_name": "Probable acyl-activating enzyme 6", "gene_name": "AAE6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80658-1", "protein_name": "Probable acyl-activating enzyme 4", "gene_name": "AEE4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LKS5-1", "protein_name": "Long chain acyl-CoA synthetase 7, peroxisomal", "gene_name": "LACS7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LPS1-1", "protein_name": "Long chain acyl-CoA synthetase 6, peroxisomal", "gene_name": "LACS6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZF1-1", "protein_name": "Acetate/butyrate--CoA ligase AAE7, peroxisomal", "gene_name": "AAE7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C7W4-1", "protein_name": "Long chain acyl-CoA synthetase 3", "gene_name": "LACS3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LK39-1", "protein_name": "Probable acyl-activating enzyme 16, chloroplastic", "gene_name": "AAE16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LPK7-1", "protein_name": "Probable acyl-activating enzyme 10", "gene_name": "AEE10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22898-1", "protein_name": "Long chain acyl-CoA synthetase 1", "gene_name": "LACS1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XIA9-1", "protein_name": "Long chain acyl-CoA synthetase 2", "gene_name": "LACS2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LPK6", "url": "https://www.uniprot.org/uniprotkb/Q9LPK6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12177484", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 21 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": 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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis glycosyltransferases as biocatalysts in fermentation for regioselective synthesis of diverse quercetin glucosides.", "journal": "Biotechnology and bioengineering", "date": "2004-09-05", "authors": "Lim Eng-Kiat, Ashford David A, Hou Bingkai, Jackson Rosamond G, Bowles Dianna J", "reference": { "type": "PubMed", "id": "15352060", "url": "https://pubmed.ncbi.nlm.nih.gov/15352060" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LNI1-1", "protein_name": "UDP-glycosyltransferase 72B3", "gene_name": "UGT72B3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSY4-1", "protein_name": "UDP-glycosyltransferase 71B8", "gene_name": "UGT71B8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTH2-1", "protein_name": "UDP-glycosyltransferase 76E2", "gene_name": "UGT76E2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTH3-1", "protein_name": "UDP-glycosyltransferase 76E1", "gene_name": "UGT76E1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82382-1", "protein_name": "UDP-glycosyltransferase 71C2", "gene_name": "UGT71C2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SNB1-1", "protein_name": "UDP-glycosyltransferase 76E11", "gene_name": "UGT76E11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94C57-1", "protein_name": "UDP-glucosyl transferase 73B2", "gene_name": "UGT73B2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94AB5-1", "protein_name": "Flavonol 3-O-glucosyltransferase UGT76E12", "gene_name": "UGT76E12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9B0-1", "protein_name": "Flavonol 3-O-glucosyltransferase UGT89B1", "gene_name": "UGT89B1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FE68-1", "protein_name": "UDP-glycosyltransferase 71C5", "gene_name": "UGT71C5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LK73-1", "protein_name": "UDP-glycosyltransferase 88A1", "gene_name": "UGT88A1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LML6-1", "protein_name": "Flavonol 3-O-glucosyltransferase UGT71C4", "gene_name": "UGT71C4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S9P6-1", "protein_name": "Flavonol-3-O-rhamnosyltransferase", "gene_name": "UGT78D1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZQ95-1", "protein_name": "UDP-glycosyltransferase 73C6", "gene_name": "UGT73C6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZE9-1", "protein_name": "UDP-glycosyltransferase 73B1", "gene_name": "UGT73B1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22182-1", "protein_name": "UDP-glycosyltransferase 84B1", "gene_name": "UGT84B1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22820-1", "protein_name": "Flavonol 7-O-beta-glucosyltransferase UGT74F1", "gene_name": "UGT74F1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82383-1", "protein_name": "UDP-glycosyltransferase 71D1", "gene_name": "UGT71D1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZQ94-1", "protein_name": "UDP-glycosyltransferase 73C5", "gene_name": "UGT73C5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23382-1", "protein_name": "UDP-glycosyltransferase 71B5", "gene_name": "UGT71B5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48715-1", "protein_name": "UDP-glycosyltransferase 76D1", "gene_name": "UGT76D1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q7Y232-1", "protein_name": "UDP-glycosyltransferase 73B4", "gene_name": "UGT73B4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W491-1", "protein_name": "UDP-glycosyltransferase 73B3", "gene_name": "UGT73B3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82381-1", "protein_name": "Flavonol 3-O-glucosyltransferase UGT71C1", "gene_name": "UGT71C1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LFJ8-1", "protein_name": "Flavonol 3-O-glucosyltransferase", "gene_name": "UGT78D2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LFK0-1", "protein_name": "UDP-glycosyltransferase 78D3", "gene_name": "UGT78D3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LML7-1", "protein_name": "UDP-glycosyltransferase 71C3", "gene_name": "UGT71C3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSY9-1", "protein_name": "UDP-glycosyltransferase 71B1", "gene_name": "UGT71B1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZQG4-1", "protein_name": "UDP-glycosyltransferase 73B5", "gene_name": "UGT73B5", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LNI1", "url": "https://www.uniprot.org/uniprotkb/Q9LNI1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15352060", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 29 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Expansin-like molecules: novel functions derived from common domains.", "journal": "J. Mol. Evol.", "date": "2002", "authors": "Ludidi N N, Heazlewood J L, Seoighe C, Irving H R, Gehring C A", "reference": { "type": "PubMed", "id": "11965432", "url": "https://pubmed.ncbi.nlm.nih.gov/11965432" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M0C2-1", "protein_name": "Putative EG45-like domain containing protein 1", "gene_name": "EGC1; EXLB2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZV52-1", "protein_name": "EG45-like domain containing protein 2", "gene_name": "EGC2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M0C2", "url": "https://www.uniprot.org/uniprotkb/Q9M0C2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11965432", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": 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"referenced_proteins": [ { "uniprot_canonical_ac": "Q9FNZ1-1", "protein_name": "Zinc finger CCCH domain-containing protein 63", "gene_name": "ZFWD2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FNZ2-1", "protein_name": "Zinc finger CCCH domain-containing protein 48", "gene_name": "ZFWD1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FE91-1", "protein_name": "Zinc finger CCCH domain-containing protein 62", "gene_name": "ZFWD4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKR9-1", "protein_name": "Zinc finger CCCH domain-containing protein 59", "gene_name": "MHK7.11; ZFWD3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FNZ1", "url": "https://www.uniprot.org/uniprotkb/Q9FNZ1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11137290", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": 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Pozo C, Schell J, Koncz C", "reference": { "type": "PubMed", "id": "11387208", "url": "https://pubmed.ncbi.nlm.nih.gov/11387208" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FV02-1", "protein_name": "F-box protein SKIP3", "gene_name": "SKIP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38997-2", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN10", "gene_name": "KIN10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39255-1", "protein_name": "SKP1-like protein 1A", "gene_name": "SKP1A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q42384-1", "protein_name": "Protein pleiotropic regulatory locus 1", "gene_name": "PRL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94AH6-1", "protein_name": "Cullin-1", "gene_name": "CUL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M2C9-1", "protein_name": "F-box/kelch-repeat protein SKIP4", "gene_name": "SKIP4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJ04-1", "protein_name": "F-box/kelch-repeat protein SKIP6", "gene_name": "SKIP6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94FT2-1", "protein_name": "F-box protein SKIP5", "gene_name": "SKIP5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P30186-1", "protein_name": "Proteasome subunit alpha type-7-A", "gene_name": "PAD1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FEF8-1", "protein_name": "rRNA 2'-O-methyltransferase fibrillarin 1", "gene_name": "FIB1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P92958-1", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN11", "gene_name": "KIN11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FDX1-1", "protein_name": "F-box protein SKIP1", "gene_name": "SKIP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FE83-1", "protein_name": "F-box protein SKIP2", "gene_name": "SKIP2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FV02", "url": "https://www.uniprot.org/uniprotkb/Q9FV02" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11387208", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 13 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Signature of balancing selection in Arabidopsis.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2002-08-20", "authors": "Tian Dacheng, Araki Hitoshi, Stahl Eli, Bergelson Joy, Kreitman Martin", "reference": { "type": "PubMed", "id": "12172007", "url": "https://pubmed.ncbi.nlm.nih.gov/12172007" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FWW8-1", "protein_name": "Putative F-box protein At1g12190", "gene_name": "T28K15.8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L3R3-1", "protein_name": "Disease resistance protein RFL1", "gene_name": "RFL1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FWW8", "url": "https://www.uniprot.org/uniprotkb/Q9FWW8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12172007", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis Kunitz trypsin inhibitors in defense against spider mites.", "journal": "Front. Plant Sci.", "date": "2018", "authors": "Arnaiz Ana, Talavera-Mateo Lucia, Gonzalez-Melendi Pablo, Martinez Manuel, Diaz Isabel, Santamaria M E", "reference": { "type": "PubMed", "id": "30042779", "url": "https://pubmed.ncbi.nlm.nih.gov/30042779" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FX28-1", "protein_name": "Kunitz trypsin inhibitor 3", "gene_name": "KTI3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M8Y9-1", "protein_name": "Kunitz trypsin inhibitor 7", "gene_name": "KTI7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WNE5-1", "protein_name": "Kunitz trypsin inhibitor 6", "gene_name": "KTI6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LMU2-1", "protein_name": "Kunitz trypsin inhibitor 5", "gene_name": "KTI5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39091-1", "protein_name": "Kunitz trypsin inhibitor 1", "gene_name": "KTI1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RXD5-1", "protein_name": "Kunitz trypsin inhibitor 4", "gene_name": "KTI4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C7S6-1", "protein_name": "Kunitz trypsin inhibitor 2", "gene_name": "KTI2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FX28", "url": "https://www.uniprot.org/uniprotkb/Q9FX28" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.30042779", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The carboxylesterase gene family from Arabidopsis thaliana.", "journal": "J. Mol. Evol.", "date": "2003", "authors": "Marshall Sean D G, Putterill Joanna J, Plummer Kim M, Newcomb Richard D", "reference": { "type": "PubMed", "id": "14738307", "url": "https://pubmed.ncbi.nlm.nih.gov/14738307" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FX92-1", "protein_name": "Probable carboxylesterase 3", "gene_name": "CXE3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LVB8-1", "protein_name": "Carboxylesterase 20", "gene_name": "CXE20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9MAA7-1", "protein_name": "Gibberellin receptor GID1A", "gene_name": "GID1A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SMM9-1", "protein_name": "Probable carboxylesterase 13", "gene_name": "CXE13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SX25-1", "protein_name": "Probable carboxylesterase 6", "gene_name": "CXE6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SX78-1", "protein_name": "Probable carboxylesterase 2", "gene_name": "CXE2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FG13-1", "protein_name": "Strigolactones hydrolase CXE15", "gene_name": "CXE15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LED9-1", "protein_name": "Probable carboxylesterase 16", "gene_name": "CXE16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64640-1", "protein_name": "Probable carboxylesterase 8", "gene_name": "CXE8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64641-1", "protein_name": "Probable carboxylesterase 9", "gene_name": "CXE9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LT10-1", "protein_name": "Probable carboxylesterase 18", "gene_name": "CXE18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q940G6-1", "protein_name": "Gibberellin receptor GID1C", "gene_name": "GID1C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LFR7-1", "protein_name": 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"Gibberellin receptor GID1B", "gene_name": "GID1B", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FX92", "url": "https://www.uniprot.org/uniprotkb/Q9FX92" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.14738307", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 20 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The extracellular EXO protein mediates cell expansion in Arabidopsis leaves.", "journal": "BMC Plant Biol.", "date": "2009", "authors": "Schr\u00f6der Florian, Lisso Janina, Lange Peggy, M\u00fcssig Carsten", "reference": { "type": "PubMed", "id": "19216774", "url": "https://pubmed.ncbi.nlm.nih.gov/19216774" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FY71-1", "protein_name": "Protein EXORDIUM-like 4", "gene_name": "EXL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M8T8-1", "protein_name": "Protein EXORDIUM-like 6", "gene_name": "EXL6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SII5-1", "protein_name": "Protein EXORDIUM-like 5", "gene_name": "EXL5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C6E4-1", "protein_name": "Protein EXORDIUM-like 1", "gene_name": "EXL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZPE7-1", "protein_name": "Protein EXORDIUM", "gene_name": "EXO", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82176-1", "protein_name": "Protein EXORDIUM-like 7", "gene_name": "EXL7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FE06-1", "protein_name": "Protein EXORDIUM-like 2", "gene_name": "EXL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHM9-1", "protein_name": "Protein EXORDIUM-like 3", "gene_name": "EXL3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FY71", "url": "https://www.uniprot.org/uniprotkb/Q9FY71" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19216774", "abstract": "", "glycosylation": [], 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "SHOU4 Proteins Regulate Trafficking of Cellulose Synthase Complexes to the Plasma Membrane.", "journal": "Current biology : CB", "date": "2018-10-08", "authors": "Polko Joanna K, Barnes William J, Voiniciuc C\u0103t\u0103lin, Doctor Stephanie, Steinwand Blaire, Hill Joseph L, Tien Ming, Pauly Markus, Anderson Charles T, Kieber Joseph J", "reference": { "type": "PubMed", "id": "30245104", "url": "https://pubmed.ncbi.nlm.nih.gov/30245104" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FZ45-1", "protein_name": "Protein SHOU4-like", "gene_name": "SHOU4L", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94JQ6-1", "protein_name": "Cellulose synthase A catalytic subunit 6 [UDP-forming]", "gene_name": "CESA6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48946-1", "protein_name": "Cellulose synthase A catalytic subunit 1 [UDP-forming]", "gene_name": "CESA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q941L0-1", "protein_name": "Cellulose synthase A catalytic subunit 3 [UDP-forming]", "gene_name": "CESA3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZVA7-1", "protein_name": "Protein SHOU4", "gene_name": "SHOU4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FZ45", "url": "https://www.uniprot.org/uniprotkb/Q9FZ45" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.30245104", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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Exp. 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Biol.", "date": "2002", "authors": "Perrotta Gaetano, Grienenberger Jean Michel, Gualberto Jos\u00e9 Manuel", "reference": { "type": "PubMed", "id": "12369627", "url": "https://pubmed.ncbi.nlm.nih.gov/12369627" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9GCB9-1", "protein_name": "Small ribosomal subunit protein uS2m", "gene_name": "RPS2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9GCB9", "url": "https://www.uniprot.org/uniprotkb/Q9GCB9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12369627", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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"table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The structure at 2.4 A resolution of the protein from gene locus At3g21360, a putative FeII/2-oxoglutarate-dependent enzyme from Arabidopsis thaliana.", "journal": "Acta Crystallogr. F", "date": "2005", "authors": "Bitto Eduard, Bingman Craig A, Allard Simon T M, Wesenberg Gary E, Aceti David J, Wrobel Russell L, Frederick Ronnie O, Sreenath Hassan, Vojtik Frank C, Jeon Won Bae, Newman Craig S, Primm John, Sussman Michael R, Fox Brian G, Markley John L, Phillips George N", "reference": { "type": "PubMed", "id": "16511070", "url": "https://pubmed.ncbi.nlm.nih.gov/16511070" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LIG0-1", "protein_name": "Clavaminate synthase-like protein At3g21360", "gene_name": "MHC9_4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LIG0", "url": "https://www.uniprot.org/uniprotkb/Q9LIG0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16511070", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of three clones which commonly interact with the kinase domains of highly homologous two receptor-like kinases, RLK902 and RKL1.", "journal": "Biosci. Biotechnol. Biochem.", "date": "2004", "authors": "Tarutani Yoshiaki, Sasaki Akiko, Yasuda Michiko, Nakashita Hideo, Yoshida Shigeo, Yamaguchi Isomaro, Suzuki Yoshihito", "reference": { "type": "PubMed", "id": "15618630", "url": "https://pubmed.ncbi.nlm.nih.gov/15618630" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LK32-1", "protein_name": "Uncharacterized protein At3g27210", "gene_name": "Y-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LVI6-1", "protein_name": "Probable inactive receptor kinase RLK902", "gene_name": "RLK902", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6DR24-1", "protein_name": "Uncharacterized protein At3g17950", "gene_name": "Y-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHK4-1", "protein_name": "Protein ENHANCED DISEASE RESISTANCE 4", "gene_name": "EDR4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LK32", "url": "https://www.uniprot.org/uniprotkb/Q9LK32" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15618630", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "MIR846 and MIR842 comprise a cistronic MIRNA pair that is regulated by abscisic acid by alternative splicing in roots of Arabidopsis.", "journal": "Plant Mol. Biol.", "date": "2013", "authors": "Jia Fan, Rock Christopher D", "reference": { "type": "PubMed", "id": "23341152", "url": "https://pubmed.ncbi.nlm.nih.gov/23341152" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LKR6-1", "protein_name": "Jacalin-related lectin 40", "gene_name": "JAL40", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LKR6", "url": "https://www.uniprot.org/uniprotkb/Q9LKR6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.23341152", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Jacalin lectin At5g28520 is regulated by ABA and miR846.", "journal": "Plant Signal. 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"gene_name": "DAD1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23522-1", "protein_name": "Phospholipase A1-Ibeta2, chloroplastic", "gene_name": "FCAALL.42; dl4435w", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJI7-1", "protein_name": "Phospholipase A1-IIdelta", "gene_name": "F14N22.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82274-1", "protein_name": "Phospholipase A1-IIbeta", "gene_name": "T16B12.9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S8N6-1", "protein_name": "Phospholipase A2-alpha", "gene_name": "PLA2-ALPHA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GZB4-1", "protein_name": "Phospholipase A2-beta", "gene_name": "PLA2-BETA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GV50-1", "protein_name": "Phospholipase A2-delta", "gene_name": "PLA2-DELTA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q941F1-1", "protein_name": "Phospholipase A1-Igamma1, 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"Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LNC2", "url": "https://www.uniprot.org/uniprotkb/Q9LNC2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15130548", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 15 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The branched-chain amino acid transaminase gene family in Arabidopsis encodes plastid and mitochondrial proteins.", "journal": "Plant Physiol.", "date": "2002", "authors": "Diebold Ruth, Schuster Joachim, D\u00e4schner Klaus, Binder Stefan", "reference": { "type": "PubMed", "id": "12068099", "url": "https://pubmed.ncbi.nlm.nih.gov/12068099" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LPM8-1", "protein_name": "Putative branched-chain-amino-acid aminotransferase 7", "gene_name": "BCAT7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93Y32-1", "protein_name": "Branched-chain-amino-acid aminotransferase 1, mitochondrial", "gene_name": "BCAT-1; BCAT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FYA6-1", "protein_name": "Branched-chain-amino-acid aminotransferase 5, chloroplastic", "gene_name": "BCAT5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LPM9-1", "protein_name": "Branched-chain-amino-acid aminotransferase 6", "gene_name": "BCAT6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LE06-1", "protein_name": "Methionine aminotransferase BCAT4", "gene_name": "BCAT4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M401-1", "protein_name": "Branched-chain-amino-acid aminotransferase 3, chloroplastic", "gene_name": "BCAT3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M439-1", "protein_name": "Branched-chain-amino-acid aminotransferase 2, chloroplastic", "gene_name": "BCAT-2; BCAT2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LPM8", "url": "https://www.uniprot.org/uniprotkb/Q9LPM8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12068099", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": 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Christine, Taguchi Goro, Elliott Katherine, Hill Lionel, Tanaka Yoshikazu, Kitayama Masahiko, Yamazaki Mami, Bailey Paul, Parr Adrian, Michael Anthony J, Saito Kazuki, Martin Cathie", "reference": { "type": "PubMed", "id": "17425720", "url": "https://pubmed.ncbi.nlm.nih.gov/17425720" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LRQ7-1", "protein_name": "BAHD acyltransferase At3g29680", "gene_name": "MOD1.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LR73-1", "protein_name": "Coumaroyl-CoA:anthocyanidin 3-O-glucoside-6''-O-coumaroyltransferase 2", "gene_name": "3AT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZWB4-1", "protein_name": "Coumaroyl-CoA:anthocyanidin 3-O-glucoside-6''-O-coumaroyltransferase 1", "gene_name": "3AT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q940Z5-1", "protein_name": "Phenolic glucoside malonyltransferase 1", "gene_name": "PMAT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJB4-1", "protein_name": "Malonyl-CoA:anthocyanidin 5-O-glucoside-6''-O-malonyltransferase", "gene_name": "5MAT", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LRQ8-1", "protein_name": "Phenolic glucoside malonyltransferase 2", "gene_name": "PMAT2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LRQ7", "url": "https://www.uniprot.org/uniprotkb/Q9LRQ7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17425720", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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}, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "PIRLs: a novel class of plant intracellular leucine-rich repeat proteins.", "journal": "Plant Cell Physiol.", "date": "2005", "authors": "Forsthoefel Nancy R, Cutler Kerry, Port Martha D, Yamamoto Tori, Vernon Daniel M", "reference": { "type": "PubMed", "id": "15809230", "url": "https://pubmed.ncbi.nlm.nih.gov/15809230" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LRV8-1", "protein_name": "Plant intracellular Ras-group-related LRR protein 2", "gene_name": "PIRL2", "tax_name": "Mouse-ear cress" }, { 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"uniprot_canonical_ac": "O64566-1", "protein_name": "Plant intracellular Ras-group-related LRR protein 6", "gene_name": "PIRL6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFJ3-1", "protein_name": "Plant intracellular Ras-group-related LRR protein 1", "gene_name": "PIRL1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LRV8", "url": "https://www.uniprot.org/uniprotkb/Q9LRV8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15809230", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 9 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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}, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A novel family of cys-rich membrane proteins mediates cadmium resistance in Arabidopsis.", "journal": "Plant Physiol.", "date": "2004", "authors": "Song Won-Yong, Martinoia Enrico, Lee Joohyun, Kim Dongwoo, Kim Do-Young, Vogt Esther, Shim Donghwan, Choi Kwan Sam, Hwang Inhwan, Lee Youngsook", "reference": { "type": "PubMed", "id": "15181212", "url": "https://pubmed.ncbi.nlm.nih.gov/15181212" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LS43-1", "protein_name": "Protein PLANT CADMIUM RESISTANCE 7", "gene_name": "PCR7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LS44-1", "protein_name": "Protein PLANT CADMIUM RESISTANCE 4", "gene_name": "PCR4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LS45-1", "protein_name": "Protein PLANT CADMIUM RESISTANCE 5", "gene_name": "PCR5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M815-1", "protein_name": "Protein PLANT CADMIUM RESISTANCE 8", "gene_name": "PCR8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M9A5-1", "protein_name": "Protein PLANT CADMIUM RESISTANCE 6", "gene_name": "PCR6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LQU4-1", "protein_name": "Protein PLANT CADMIUM RESISTANCE 2", "gene_name": "PCR2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LQU2-1", "protein_name": "Protein PLANT CADMIUM RESISTANCE 1", "gene_name": "PCR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S8T8-1", "protein_name": "Protein PLANT CADMIUM RESISTANCE 10", "gene_name": "PCR10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0CW97-1", "protein_name": "Protein PLANT CADMIUM RESISTANCE 3", "gene_name": "PCR3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0CW98-1", "protein_name": "Protein PLANT CADMIUM RESISTANCE 9", "gene_name": "PCR9", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LS43", "url": "https://www.uniprot.org/uniprotkb/Q9LS43" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 29, "end_pos": 29, "sequence_org": "C", "sequence_mut": "A", "comment": "No effect on cadmium resistance. Total loss of cadmium resistance in a heterologous system; when associated with A-30; A-35; A-36 and A-37.", "evidence": [ { "database": "UniProtKB", "id": "Q9LQU2", "url": "https://www.uniprot.org/uniprotkb/Q9LQU2" }, { "database": "PubMed", "id": "15181212", "url": "https://pubmed.ncbi.nlm.nih.gov/15181212" } ], "uniprot_canonical_ac": "Q9LQU2-1" }, { "start_pos": 30, "end_pos": 30, "sequence_org": "C", "sequence_mut": "A", "comment": "No effect on cadmium resistance. Total loss of cadmium resistance in a heterologous system; when associated with A-29; A-35; A-36 and A-37.", "evidence": [ { "database": "UniProtKB", "id": "Q9LQU2", "url": "https://www.uniprot.org/uniprotkb/Q9LQU2" }, { "database": "PubMed", "id": "15181212", "url": "https://pubmed.ncbi.nlm.nih.gov/15181212" } ], "uniprot_canonical_ac": "Q9LQU2-1" }, { "start_pos": 35, "end_pos": 35, "sequence_org": "C", "sequence_mut": "A", "comment": "No effect on cadmium resistance. Decreased cadmium resistance in a heterologous system; when associated with A-36 and A-37. Total loss of cadmium resistance in a heterologous system; when associated with A-29; A-30; A-36 and A-37.", "evidence": [ { "database": "UniProtKB", "id": "Q9LQU2", "url": "https://www.uniprot.org/uniprotkb/Q9LQU2" }, { "database": "PubMed", "id": "15181212", "url": "https://pubmed.ncbi.nlm.nih.gov/15181212" } ], "uniprot_canonical_ac": "Q9LQU2-1" }, { "start_pos": 36, "end_pos": 36, "sequence_org": "P", "sequence_mut": "A", "comment": "No effect on cadmium resistance. Decreased cadmium resistance in a heterologous system; when associated with A-35 and A-37. Total loss of cadmium resistance in a heterologous system; when associated with A-29; A-30; A-35 and A-37.", "evidence": [ { "database": "UniProtKB", "id": "Q9LQU2", "url": "https://www.uniprot.org/uniprotkb/Q9LQU2" }, { "database": "PubMed", "id": "15181212", "url": "https://pubmed.ncbi.nlm.nih.gov/15181212" } ], "uniprot_canonical_ac": "Q9LQU2-1" }, { "start_pos": 37, "end_pos": 37, "sequence_org": "C", "sequence_mut": "A", "comment": "No effect on cadmium resistance. Decreased cadmium resistance in a heterologous system; when associated with A-35 and A-36. Total loss of cadmium resistance in a heterologous system; when associated with A-29; A-30; A-35 and A-36.", "evidence": [ { "database": "UniProtKB", "id": "Q9LQU2", "url": "https://www.uniprot.org/uniprotkb/Q9LQU2" }, { "database": "PubMed", "id": "15181212", "url": "https://pubmed.ncbi.nlm.nih.gov/15181212" } ], "uniprot_canonical_ac": "Q9LQU2-1" } ], "record_id": "pubmed.15181212", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 10 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of an abscisic acid transporter by functional screening using the receptor complex as a sensor.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2012-06-12", "authors": "Kanno Yuri, Hanada Atsushi, Chiba Yasutaka, Ichikawa Takanari, Nakazawa Miki, Matsui Minami, Koshiba Tomokazu, Kamiya Yuji, Seo Mitsunori", "reference": { "type": "PubMed", "id": "22645333", "url": "https://pubmed.ncbi.nlm.nih.gov/22645333" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LSE8-1", "protein_name": "Protein NRT1/ PTR FAMILY 4.2", "gene_name": "NPF4.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSF0-1", "protein_name": "Protein NRT1/ PTR FAMILY 4.1", "gene_name": "NPF4.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VYE4-1", "protein_name": "Protein NRT1/ PTR FAMILY 4.5", "gene_name": "NPF4.5; NPF45", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H157-1", "protein_name": "Protein NRT1/ PTR FAMILY 4.6", "gene_name": "NPF4.6", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LSE8", "url": "https://www.uniprot.org/uniprotkb/Q9LSE8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.22645333", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structural evidence for adaptive ligand binding of glycolipid transfer protein.", "journal": "Journal of molecular biology", "date": "2006-01-13", "authors": "Airenne Tomi T, Kidron Heidi, Nymalm Yvonne, Nylund Matts, West Gun, Mattjus Peter, Salminen Tiina A", "reference": { "type": "PubMed", "id": "16309699", "url": "https://pubmed.ncbi.nlm.nih.gov/16309699" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LU33-1", "protein_name": "Glycolipid transfer protein 3", "gene_name": "GLTP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NLQ3-1", "protein_name": "Glycolipid transfer protein 2", "gene_name": "GLTP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22797-1", "protein_name": "Glycolipid transfer protein 1", "gene_name": "GLTP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P68265-1", "protein_name": "Glycolipid transfer protein", "gene_name": "GLTP", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "O64587-1", "protein_name": "Accelerated cell death 11", "gene_name": "ACD11", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LU33", "url": "https://www.uniprot.org/uniprotkb/Q9LU33" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16309699", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis ALF5, a multidrug efflux transporter gene family member, confers resistance to toxins.", "journal": "Plant Cell", "date": "2001", "authors": "Diener A C, Gaxiola R A, Fink G R", "reference": { "type": "PubMed", "id": "11449055", "url": "https://pubmed.ncbi.nlm.nih.gov/11449055" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LUH3-1", "protein_name": "Protein DETOXIFICATION 18", "gene_name": "DTX18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LUH2-1", "protein_name": "Protein DETOXIFICATION 19", "gene_name": "ALF5; DTX19", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LUH3", "url": "https://www.uniprot.org/uniprotkb/Q9LUH3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11449055", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { 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"total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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Natl. Acad. Sci. U.S.A.", "date": "2004", "authors": "Michaels Scott D, Bezerra Isabel C, Amasino Richard M", "reference": { "type": "PubMed", "id": "14973192", "url": "https://pubmed.ncbi.nlm.nih.gov/14973192" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LUV4-1", "protein_name": "FRIGIDA-like protein 4a", "gene_name": "FRL4A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q5XV31-1", "protein_name": "FRIGIDA-like protein 5", "gene_name": "FRL5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q67ZB3-1", "protein_name": "FRIGIDA-like protein 3", "gene_name": "FRL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q940H8-1", "protein_name": "FRIGIDA-like protein 4b", "gene_name": "FRL4B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFF1-1", "protein_name": "FRIGIDA-like protein 1", "gene_name": "FRL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C6S2-1", "protein_name": "Inactive FRIGIDA-like protein 2", "gene_name": "FRL2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LUV4", "url": "https://www.uniprot.org/uniprotkb/Q9LUV4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.14973192", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "FRIGIDA and related proteins have a conserved central domain and family specific N- and C- terminal regions that are functionally important.", "journal": "Plant Mol. Biol.", "date": "2010", "authors": "Risk Joanna M, Laurie Rebecca E, Macknight Richard C, Day Catherine L", "reference": { "type": "PubMed", "id": "20405310", "url": "https://pubmed.ncbi.nlm.nih.gov/20405310" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LUV4-1", "protein_name": "FRIGIDA-like protein 4a", "gene_name": "FRL4A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q5XV31-1", "protein_name": "FRIGIDA-like protein 5", "gene_name": "FRL5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q67ZB3-1", "protein_name": "FRIGIDA-like protein 3", "gene_name": "FRL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q940H8-1", "protein_name": "FRIGIDA-like protein 4b", "gene_name": "FRL4B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFF1-1", "protein_name": "FRIGIDA-like protein 1", "gene_name": "FRL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C6S2-1", "protein_name": "Inactive FRIGIDA-like protein 2", "gene_name": "FRL2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LUV4", "url": "https://www.uniprot.org/uniprotkb/Q9LUV4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.20405310", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "An endogenous peptide signal in Arabidopsis activates components of the innate immune response.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "2006", "authors": "Huffaker Alisa, Pearce Gregory, Ryan Clarence A", "reference": { "type": "PubMed", "id": "16785434", "url": "https://pubmed.ncbi.nlm.nih.gov/16785434" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LV88-1", "protein_name": "Elicitor peptide 2", "gene_name": "PEP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIZ9-1", "protein_name": "Elicitor peptide 6", "gene_name": "PEP6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LAX3-1", "protein_name": "Elicitor peptide 3", "gene_name": "PEP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LD63-1", "protein_name": "Elicitor peptide 5", "gene_name": "PEP5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIA9-1", "protein_name": "Elicitor peptide 4", "gene_name": "PEP4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0C1T5-1", "protein_name": "Elicitor peptide 7", "gene_name": "PEP7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LV87-1", "protein_name": "Precursor of elicitor peptide 1", "gene_name": "PROPEP1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LV88", "url": "https://www.uniprot.org/uniprotkb/Q9LV88" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16785434", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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