[ { "title": "Alternative pathway of complement: recruitment of precursor properdin by the labile C3/C5 convertase and the potentiation of the pathway.", "journal": "The Journal of experimental medicine", "date": "1976", "authors": "Medicus RG, Gotze O, Muller-Eberhard HJ", "reference": { "type": "PubMed", "id": "978134", "url": "https://pubmed.ncbi.nlm.nih.gov/978134" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01700-1", "protein_name": "Immunoglobulin lambda variable 1-47", "gene_name": "IGLV1-47", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01714-1", "protein_name": "Immunoglobulin lambda variable 3-19", "gene_name": "IGLV3-19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P80748-1", "protein_name": "Immunoglobulin lambda variable 3-21", "gene_name": "IGLV3-21", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A075B6P5-1", "protein_name": "Immunoglobulin kappa variable 2-28", "gene_name": "IGKV2-28", "tax_name": "Human" }, { 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"uniprot_canonical_ac": "P01619-1", "protein_name": "Immunoglobulin kappa variable 3-20", "gene_name": "IGKV3-20", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01624-1", "protein_name": "Immunoglobulin kappa variable 3-15", "gene_name": "IGKV3-15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04433-1", "protein_name": "Immunoglobulin kappa variable 3-11", "gene_name": "IGKV3-11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01602-1", "protein_name": "Immunoglobulin kappa variable 1-5", "gene_name": "IGKV1-5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00734-1", "protein_name": "Prothrombin", "gene_name": "F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10909-1", "protein_name": "Clusterin", "gene_name": "CLU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06681-1", "protein_name": "Complement C2", "gene_name": "C2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15391-1", "protein_name": "B-lymphocyte antigen CD19", "gene_name": "CD19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08246-1", "protein_name": "Neutrophil elastase", "gene_name": "ELANE", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01767-1", "protein_name": "Immunoglobulin heavy variable 3-53", "gene_name": "IGHV3-53", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06331-1", "protein_name": "Immunoglobulin heavy variable 4-34", "gene_name": "IGHV4-34", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01597-1", "protein_name": "Immunoglobulin kappa variable 1-39", "gene_name": "IGKV1-39", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06310-1", "protein_name": "Immunoglobulin kappa variable 2-30", "gene_name": "IGKV2-30", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06312-1", "protein_name": "Immunoglobulin kappa variable 4-1", "gene_name": "IGKV4-1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01614-1", "protein_name": "Immunoglobulin kappa variable 2D-40", "gene_name": "IGKV2D-40", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DOY2-1", "protein_name": "Immunoglobulin lambda constant 2", "gene_name": "IGLC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08603-1", "protein_name": "Complement factor H", "gene_name": "CFH", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05156-1", "protein_name": "Complement factor I", "gene_name": "CFI", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16581-1", "protein_name": "C3a anaphylatoxin chemotactic receptor", "gene_name": "C3AR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00736-1", "protein_name": "Complement C1r subcomponent", "gene_name": "C1R", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09871-1", "protein_name": "Complement C1s subcomponent", "gene_name": "C1S", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04003-1", "protein_name": "C4b-binding protein alpha chain", "gene_name": "C4BPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02747-1", "protein_name": "Complement C1q subcomponent subunit C", "gene_name": "C1QC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20851-1", "protein_name": "C4b-binding protein beta chain", "gene_name": "C4BPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IY4-1", "protein_name": "Carboxypeptidase B2", "gene_name": "CPB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00746-1", "protein_name": "Complement factor D", "gene_name": "CFD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C0L5-1", "protein_name": "Complement C4-B", "gene_name": "C4B_2; C4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C0L4-1", "protein_name": "Complement C4-A", "gene_name": "C4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07360-1", "protein_name": "Complement component C8 gamma chain", "gene_name": "C8G", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13671-1", "protein_name": "Complement component C6", "gene_name": "C6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01031-1", "protein_name": "Complement C5", "gene_name": 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"P01701-1", "protein_name": "Immunoglobulin lambda variable 1-51", "gene_name": "IGLV1-51", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01704-1", "protein_name": "Immunoglobulin lambda variable 2-14", "gene_name": "IGLV2-14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01706-1", "protein_name": "Immunoglobulin lambda variable 2-11", "gene_name": "IGLV2-11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01709-1", "protein_name": "Immunoglobulin lambda variable 2-8", "gene_name": "IGLV2-8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01717-1", "protein_name": "Immunoglobulin lambda variable 3-25", "gene_name": "IGLV3-25", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01721-1", "protein_name": "Immunoglobulin lambda variable 6-57", "gene_name": "IGLV6-57", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01703-1", "protein_name": "Immunoglobulin lambda variable 1-40", "gene_name": "IGLV1-40", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01705-1", "protein_name": "Immunoglobulin lambda variable 2-23", "gene_name": "IGLV2-23", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01715-1", "protein_name": "Immunoglobulin lambda variable 3-1", "gene_name": "IGLV3-1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01718-1", "protein_name": "Immunoglobulin lambda variable 3-27", "gene_name": "IGLV3-27", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04211-1", "protein_name": "Immunoglobulin lambda variable 7-43", "gene_name": "IGLV7-43", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05155-1", "protein_name": "Plasma protease C1 inhibitor", "gene_name": "SERPING1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22792-1", "protein_name": "Carboxypeptidase N subunit 2", "gene_name": "CPN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20023-1", "protein_name": "Complement receptor type 2", "gene_name": "CR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01860-2", "protein_name": "Immunoglobulin heavy constant gamma 3", "gene_name": "IGHG3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01861-2", "protein_name": "Immunoglobulin heavy constant gamma 4", "gene_name": "IGHG4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CF74-1", "protein_name": "Immunoglobulin lambda constant 6", "gene_name": "IGLC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17927-1", "protein_name": "Complement receptor type 1", "gene_name": "CR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10643-1", "protein_name": "Complement component C7", "gene_name": "C7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07358-1", "protein_name": "Complement component C8 beta chain", "gene_name": "C8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXR6-1", "protein_name": "Complement factor H-related protein 5", "gene_name": "CFHR5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P36980-1", "protein_name": "Complement factor H-related protein 2", "gene_name": "CFHR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02985-1", "protein_name": "Complement factor H-related protein 3", "gene_name": "CFHR3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02746-1", "protein_name": "Complement C1q subcomponent subunit B", "gene_name": "C1QB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P296-1", "protein_name": "C5a anaphylatoxin chemotactic receptor 2", "gene_name": "C5AR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02745-1", "protein_name": "Complement C1q subcomponent subunit A", "gene_name": "C1QA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04004-1", "protein_name": "Vitronectin", "gene_name": "VTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51124-1", "protein_name": "Granzyme M", "gene_name": "GZMM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01825-1", "protein_name": "Immunoglobulin heavy variable 4-59", "gene_name": "IGHV4-59", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01817-1", "protein_name": "Immunoglobulin heavy variable 2-5", "gene_name": "IGHV2-5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01824-1", "protein_name": "Immunoglobulin heavy variable 4-39", "gene_name": "IGHV4-39", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23083-1", "protein_name": "Immunoglobulin heavy variable 1-2", "gene_name": "IGHV1-2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07225-1", "protein_name": "Vitamin K-dependent protein S", "gene_name": "PROS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01742-1", "protein_name": "Immunoglobulin heavy variable 1-69", "gene_name": "IGHV1-69", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01768-1", "protein_name": "Immunoglobulin heavy variable 3-30", "gene_name": "IGHV3-30", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01814-1", "protein_name": "Immunoglobulin heavy variable 2-70", "gene_name": "IGHV2-70", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92496-1", "protein_name": "Complement factor H-related protein 4", "gene_name": "CFHR4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01772-1", "protein_name": "Immunoglobulin heavy variable 3-33", "gene_name": "IGHV3-33", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01762-1", "protein_name": "Immunoglobulin heavy variable 3-11", "gene_name": "IGHV3-11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01763-1", "protein_name": "Immunoglobulin heavy variable 3-48", "gene_name": "IGHV3-48", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01764-1", "protein_name": "Immunoglobulin heavy variable 3-23", "gene_name": "IGHV3-23", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01766-1", "protein_name": "Immunoglobulin heavy variable 3-13", "gene_name": "IGHV3-13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01780-1", "protein_name": "Immunoglobulin heavy variable 3-7", "gene_name": "IGHV3-7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01782-1", "protein_name": "Immunoglobulin heavy variable 3-9", "gene_name": "IGHV3-9", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0M8Q6-1", "protein_name": "Immunoglobulin lambda constant 7", "gene_name": "IGLC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01834-1", "protein_name": "Immunoglobulin kappa constant", "gene_name": "IGKC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01859-2", "protein_name": "Immunoglobulin heavy constant gamma 2", "gene_name": "IGHG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG04-1", "protein_name": "Immunoglobulin lambda constant 1", "gene_name": "IGLC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DOY3-1", "protein_name": "Immunoglobulin lambda constant 3", "gene_name": "IGLC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60033-1", "protein_name": "CD81 antigen", "gene_name": "CD81", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21730-1", "protein_name": "C5a anaphylatoxin chemotactic receptor 1", "gene_name": "C5AR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15169-1", "protein_name": "Carboxypeptidase N catalytic chain", "gene_name": "CPN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01024-1", "protein_name": "Complement C3", "gene_name": "C3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00751-1", "protein_name": "Complement factor B", "gene_name": "CFB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01743-1", "protein_name": "Immunoglobulin heavy variable 1-46", "gene_name": "IGHV1-46", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27918-1", "protein_name": "Properdin", "gene_name": "CFP", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0C4DH73-1", "protein_name": "Immunoglobulin kappa variable 1-12", "gene_name": "IGKV1-12", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2NJV5-1", "protein_name": "Immunoglobulin kappa variable 2-29", "gene_name": "IGKV2-29", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01594-1", "protein_name": "Immunoglobulin kappa variable 1-33", "gene_name": "IGKV1-33", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04430-1", "protein_name": "Immunoglobulin kappa variable 1-16", "gene_name": "IGKV1-16", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01857-2", "protein_name": "Immunoglobulin heavy constant gamma 1", "gene_name": "IGHG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q03591-1", "protein_name": "Complement factor H-related protein 1", "gene_name": "CFHR1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01700", "url": "https://www.uniprot.org/uniprotkb/P01700" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.978134", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 112 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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A critical role for Cbl phosphotyrosine-binding domain binding to Syk phosphotyrosine 323.", "journal": "The Journal of biological chemistry", "date": "1998", "authors": "Lupher ML Jr, Rao N, Lill NL, Andoniou CE, Miyake S, Clark EA, Druker B, Band H", "reference": { "type": "PubMed", "id": "9857068", "url": "https://pubmed.ncbi.nlm.nih.gov/9857068" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01700-1", "protein_name": "Immunoglobulin lambda variable 1-47", "gene_name": "IGLV1-47", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01714-1", "protein_name": "Immunoglobulin lambda variable 3-19", "gene_name": "IGLV3-19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P80748-1", "protein_name": "Immunoglobulin lambda variable 3-21", "gene_name": "IGLV3-21", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A075B6P5-1", "protein_name": "Immunoglobulin kappa variable 2-28", "gene_name": "IGKV2-28", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"P01619-1", "protein_name": "Immunoglobulin kappa variable 3-20", "gene_name": "IGKV3-20", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01624-1", "protein_name": "Immunoglobulin kappa variable 3-15", "gene_name": "IGKV3-15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04433-1", "protein_name": "Immunoglobulin kappa variable 3-11", "gene_name": "IGKV3-11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01602-1", "protein_name": "Immunoglobulin kappa variable 1-5", "gene_name": "IGKV1-5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22694-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit beta", "gene_name": "PRKACB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08631-1", "protein_name": "Tyrosine-protein kinase HCK", "gene_name": "HCK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14643-1", "protein_name": "Inositol 1,4,5-trisphosphate-gated calcium channel ITPR1", "gene_name": "ITPR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43405-1", "protein_name": "Tyrosine-protein kinase SYK", "gene_name": "SYK", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08637-1", "protein_name": "Low affinity immunoglobulin gamma Fc region receptor III-A", "gene_name": "FCGR3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01767-1", "protein_name": "Immunoglobulin heavy variable 3-53", "gene_name": "IGHV3-53", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06331-1", "protein_name": "Immunoglobulin heavy variable 4-34", "gene_name": "IGHV4-34", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14571-1", "protein_name": "Inositol 1,4,5-trisphosphate-gated calcium channel ITPR2", "gene_name": "ITPR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01597-1", "protein_name": "Immunoglobulin kappa variable 1-39", "gene_name": "IGKV1-39", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06310-1", "protein_name": "Immunoglobulin kappa variable 2-30", "gene_name": "IGKV2-30", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06312-1", "protein_name": "Immunoglobulin kappa variable 4-1", "gene_name": "IGKV4-1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01614-1", "protein_name": "Immunoglobulin kappa variable 2D-40", "gene_name": "IGKV2D-40", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DOY2-1", "protein_name": "Immunoglobulin lambda constant 2", "gene_name": "IGLC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DP23-1", "protein_name": "Calmodulin-1", "gene_name": "CALM1; CALM2; CALM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09693-1", "protein_name": "T-cell surface glycoprotein CD3 gamma chain", "gene_name": "CD3G", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04432-1", "protein_name": "Immunoglobulin kappa variable 1D-39", "gene_name": "IGKV1D-39", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06315-1", "protein_name": "Immunoglobulin kappa variable 5-2", "gene_name": "IGKV5-2", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"protein_name": "Immunoglobulin lambda variable 1-40", "gene_name": "IGLV1-40", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01705-1", "protein_name": "Immunoglobulin lambda variable 2-23", "gene_name": "IGLV2-23", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01715-1", "protein_name": "Immunoglobulin lambda variable 3-1", "gene_name": "IGLV3-1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01718-1", "protein_name": "Immunoglobulin lambda variable 3-27", "gene_name": "IGLV3-27", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04211-1", "protein_name": "Immunoglobulin lambda variable 7-43", "gene_name": "IGLV7-43", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit gamma", "gene_name": "PRKACG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01860-2", "protein_name": "Immunoglobulin heavy constant gamma 3", "gene_name": "IGHG3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01861-2", "protein_name": "Immunoglobulin heavy constant gamma 4", "gene_name": "IGHG4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CF74-1", "protein_name": "Immunoglobulin lambda constant 6", "gene_name": "IGLC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13861-1", "protein_name": "cAMP-dependent protein kinase type II-alpha regulatory subunit", "gene_name": "PRKAR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95622-1", "protein_name": "Adenylate cyclase type 5", "gene_name": "ADCY5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08828-1", "protein_name": "Adenylate cyclase type 1", "gene_name": "ADCY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40145-1", "protein_name": "Adenylate cyclase type 8", "gene_name": "ADCY8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFM4-1", "protein_name": "Adenylate cyclase type 4", "gene_name": "ADCY4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07948-1", "protein_name": "Tyrosine-protein kinase Lyn", "gene_name": "LYN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07947-1", "protein_name": "Tyrosine-protein kinase Yes", "gene_name": "YES1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16885-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2", "gene_name": "PLCG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09769-1", "protein_name": "Tyrosine-protein kinase Fgr", "gene_name": "FGR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12314-1", "protein_name": "High affinity immunoglobulin gamma Fc receptor I", "gene_name": "FCGR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51817-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit PRKX", "gene_name": "PRKX", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43865-1", "protein_name": "S-adenosylhomocysteine hydrolase-like protein 1", "gene_name": "AHCYL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31321-1", "protein_name": "cAMP-dependent protein kinase type I-beta regulatory subunit", "gene_name": "PRKAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22301-1", "protein_name": "Interleukin-10", "gene_name": "IL10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01825-1", "protein_name": "Immunoglobulin heavy variable 4-59", "gene_name": "IGHV4-59", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01817-1", "protein_name": "Immunoglobulin heavy variable 2-5", "gene_name": "IGHV2-5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01824-1", "protein_name": "Immunoglobulin heavy variable 4-39", "gene_name": "IGHV4-39", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23083-1", "protein_name": "Immunoglobulin heavy variable 1-2", "gene_name": "IGHV1-2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01742-1", "protein_name": "Immunoglobulin heavy variable 1-69", "gene_name": "IGHV1-69", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01768-1", "protein_name": "Immunoglobulin heavy variable 3-30", "gene_name": "IGHV3-30", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01814-1", "protein_name": "Immunoglobulin heavy variable 2-70", "gene_name": "IGHV2-70", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01772-1", "protein_name": "Immunoglobulin heavy variable 3-33", "gene_name": "IGHV3-33", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01762-1", "protein_name": "Immunoglobulin heavy variable 3-11", "gene_name": "IGHV3-11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01763-1", "protein_name": "Immunoglobulin heavy variable 3-48", "gene_name": "IGHV3-48", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01764-1", "protein_name": "Immunoglobulin heavy variable 3-23", "gene_name": "IGHV3-23", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01766-1", "protein_name": "Immunoglobulin heavy variable 3-13", "gene_name": "IGHV3-13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01780-1", "protein_name": "Immunoglobulin heavy variable 3-7", "gene_name": "IGHV3-7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01782-1", "protein_name": "Immunoglobulin heavy variable 3-9", "gene_name": "IGHV3-9", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0M8Q6-1", "protein_name": "Immunoglobulin lambda constant 7", "gene_name": "IGLC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01834-1", "protein_name": "Immunoglobulin kappa constant", "gene_name": "IGKC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01859-2", "protein_name": "Immunoglobulin heavy constant gamma 2", "gene_name": "IGHG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG04-1", "protein_name": "Immunoglobulin lambda constant 1", "gene_name": "IGLC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DOY3-1", "protein_name": "Immunoglobulin lambda constant 3", "gene_name": "IGLC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01743-1", "protein_name": "Immunoglobulin heavy variable 1-46", "gene_name": "IGHV1-46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14573-1", "protein_name": "Inositol 1,4,5-trisphosphate-gated calcium channel ITPR3", "gene_name": "ITPR3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0C4DH73-1", "protein_name": "Immunoglobulin kappa variable 1-12", "gene_name": "IGKV1-12", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2NJV5-1", "protein_name": "Immunoglobulin kappa variable 2-29", "gene_name": "IGKV2-29", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01594-1", "protein_name": "Immunoglobulin kappa variable 1-33", "gene_name": "IGKV1-33", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04430-1", "protein_name": "Immunoglobulin kappa variable 1-16", "gene_name": "IGKV1-16", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01857-2", "protein_name": "Immunoglobulin heavy constant gamma 1", "gene_name": "IGHG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12318-1", "protein_name": "Low affinity immunoglobulin gamma Fc region receptor II-a", "gene_name": "FCGR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06241-1", "protein_name": "Tyrosine-protein kinase Fyn", "gene_name": "FYN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51828-1", "protein_name": "Adenylate cyclase type 7", "gene_name": "ADCY7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43306-1", "protein_name": "Adenylate cyclase type 6", "gene_name": "ADCY6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08462-1", "protein_name": "Adenylate cyclase type 2", "gene_name": "ADCY2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01700", "url": "https://www.uniprot.org/uniprotkb/P01700" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 323, "end_pos": 323, "kinase_uniprot_canonical_ac": "P43405-1", "kinase_gene_name": "SYK", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "P43405", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P43405" }, { "database": "PubMed", "id": "16497976", "url": "https://pubmed.ncbi.nlm.nih.gov/16497976" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "20058876", "url": "https://pubmed.ncbi.nlm.nih.gov/20058876" }, { "database": "PubMed", "id": "9857068", "url": "https://pubmed.ncbi.nlm.nih.gov/9857068" }, { "database": "PubMed", "id": "9820500", "url": "https://pubmed.ncbi.nlm.nih.gov/9820500" } ], "site_lbl": "Tyr323", "uniprot_canonical_ac": "P43405-1" } ], "record_id": "pubmed.9857068", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 99 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, 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"uniprot_canonical_ac": "P01700-1", "protein_name": "Immunoglobulin lambda variable 1-47", "gene_name": "IGLV1-47", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01714-1", "protein_name": "Immunoglobulin lambda variable 3-19", "gene_name": "IGLV3-19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P80748-1", "protein_name": "Immunoglobulin lambda variable 3-21", "gene_name": "IGLV3-21", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A075B6P5-1", "protein_name": "Immunoglobulin kappa variable 2-28", "gene_name": "IGKV2-28", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A075B6S6-1", "protein_name": "Immunoglobulin kappa variable 2D-30", "gene_name": "IGKV2D-30", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0C4DH25-1", "protein_name": "Immunoglobulin kappa variable 3D-20", "gene_name": "IGKV3D-20", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01593-1", "protein_name": "Immunoglobulin kappa variable 1D-33", "gene_name": "IGKV1D-33", "tax_name": "Human" }, { 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"evidence": [ { "database": "UniProtKB", "id": "P35329", "url": "https://www.uniprot.org/uniprotkb/P35329" }, { "database": "PubMed", "id": "10373493", "url": "https://pubmed.ncbi.nlm.nih.gov/10373493" }, { "database": "IntAct", "id": "P35329", "url": "https://www.ebi.ac.uk/intact/interactors/id:P35329*" }, { "database": "iPTMnet", "id": "P35329", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P35329" }, { "database": "PubMed", "id": "9890995", "url": "https://pubmed.ncbi.nlm.nih.gov/9890995" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P35329-1" }, { "start_pos": 843, "end_pos": 843, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine", "evidence": [ { "database": "UniProtKB", "id": "P35329", "url": "https://www.uniprot.org/uniprotkb/P35329" }, { "database": "PubMed", "id": "10373493", "url": "https://pubmed.ncbi.nlm.nih.gov/10373493" }, { "database": "IntAct", "id": "P35329", "url": 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Fc gamma receptor-mediated activation of phospholipase D regulates macrophage phagocytosis of IgG-opsonized particles.", "journal": "Journal of immunology (Baltimore, Md. : 1950)", "date": "1999", "authors": "Kusner DJ, Hall CF, Jackson S", "reference": { "type": "PubMed", "id": "9973503", "url": "https://pubmed.ncbi.nlm.nih.gov/9973503" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01700-1", "protein_name": "Immunoglobulin lambda variable 1-47", "gene_name": "IGLV1-47", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01714-1", "protein_name": "Immunoglobulin lambda variable 3-19", "gene_name": "IGLV3-19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P80748-1", "protein_name": "Immunoglobulin lambda variable 3-21", "gene_name": "IGLV3-21", "tax_name": "Human" }, { "uniprot_canonical_ac": 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variable 2-30", "gene_name": "IGKV2-30", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06312-1", "protein_name": "Immunoglobulin kappa variable 4-1", "gene_name": "IGKV4-1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01614-1", "protein_name": "Immunoglobulin kappa variable 2D-40", "gene_name": "IGKV2D-40", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q05655-1", "protein_name": "Protein kinase C delta type", "gene_name": "PRKCD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13393-1", "protein_name": "Phospholipase D1", "gene_name": "PLD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14939-1", "protein_name": "Phospholipase D2", "gene_name": "PLD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DOY2-1", "protein_name": "Immunoglobulin lambda constant 2", "gene_name": "IGLC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09693-1", "protein_name": "T-cell surface glycoprotein CD3 gamma chain", "gene_name": "CD3G", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04432-1", "protein_name": "Immunoglobulin kappa variable 1D-39", "gene_name": "IGKV1D-39", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06315-1", "protein_name": "Immunoglobulin kappa variable 5-2", "gene_name": "IGKV5-2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01699-1", "protein_name": "Immunoglobulin lambda variable 1-44", "gene_name": "IGLV1-44", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01701-1", "protein_name": "Immunoglobulin lambda variable 1-51", "gene_name": "IGLV1-51", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01704-1", "protein_name": "Immunoglobulin lambda variable 2-14", "gene_name": "IGLV2-14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01706-1", "protein_name": "Immunoglobulin lambda variable 2-11", "gene_name": "IGLV2-11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01709-1", "protein_name": "Immunoglobulin lambda variable 2-8", "gene_name": "IGLV2-8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01717-1", "protein_name": "Immunoglobulin lambda variable 3-25", "gene_name": "IGLV3-25", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01721-1", "protein_name": "Immunoglobulin lambda variable 6-57", "gene_name": "IGLV6-57", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01703-1", "protein_name": "Immunoglobulin lambda variable 1-40", "gene_name": "IGLV1-40", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01705-1", "protein_name": "Immunoglobulin lambda variable 2-23", "gene_name": "IGLV2-23", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01715-1", "protein_name": "Immunoglobulin lambda variable 3-1", "gene_name": "IGLV3-1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01718-1", "protein_name": "Immunoglobulin lambda variable 3-27", "gene_name": "IGLV3-27", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04211-1", "protein_name": "Immunoglobulin lambda variable 7-43", "gene_name": "IGLV7-43", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01860-2", "protein_name": "Immunoglobulin heavy constant gamma 3", "gene_name": "IGHG3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01861-2", "protein_name": "Immunoglobulin heavy constant gamma 4", "gene_name": "IGHG4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CF74-1", "protein_name": "Immunoglobulin lambda constant 6", "gene_name": "IGLC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02156-1", "protein_name": "Protein kinase C epsilon type", "gene_name": "PRKCE", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00459-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit beta", "gene_name": "PIK3R2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16885-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2", "gene_name": "PLCG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12314-1", "protein_name": "High affinity immunoglobulin gamma Fc receptor I", "gene_name": "FCGR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43865-1", "protein_name": "S-adenosylhomocysteine hydrolase-like protein 1", "gene_name": "AHCYL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01825-1", "protein_name": "Immunoglobulin heavy variable 4-59", "gene_name": "IGHV4-59", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42338-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform", "gene_name": "PIK3CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01817-1", "protein_name": "Immunoglobulin heavy variable 2-5", "gene_name": "IGHV2-5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01824-1", "protein_name": "Immunoglobulin heavy variable 4-39", "gene_name": "IGHV4-39", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23083-1", "protein_name": "Immunoglobulin heavy variable 1-2", "gene_name": "IGHV1-2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60733-1", "protein_name": "85/88 kDa calcium-independent phospholipase A2", "gene_name": "PLA2G6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZY2-1", "protein_name": "Phospholipid phosphatase 4", "gene_name": "PLPP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEB5-1", "protein_name": "Phospholipid phosphatase 5", "gene_name": "PLPP5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ4-1", "protein_name": "5'-3' exonuclease PLD4", "gene_name": "PLD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01742-1", "protein_name": "Immunoglobulin heavy variable 1-69", "gene_name": "IGHV1-69", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01768-1", "protein_name": "Immunoglobulin heavy variable 3-30", "gene_name": "IGHV3-30", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01814-1", "protein_name": "Immunoglobulin heavy variable 2-70", "gene_name": "IGHV2-70", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01772-1", "protein_name": "Immunoglobulin heavy variable 3-33", "gene_name": "IGHV3-33", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01762-1", "protein_name": "Immunoglobulin heavy variable 3-11", "gene_name": "IGHV3-11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01763-1", "protein_name": "Immunoglobulin heavy variable 3-48", "gene_name": "IGHV3-48", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01764-1", "protein_name": "Immunoglobulin heavy variable 3-23", "gene_name": "IGHV3-23", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01766-1", "protein_name": "Immunoglobulin heavy variable 3-13", "gene_name": "IGHV3-13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01780-1", "protein_name": "Immunoglobulin heavy variable 3-7", "gene_name": "IGHV3-7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01782-1", "protein_name": "Immunoglobulin heavy variable 3-9", "gene_name": "IGHV3-9", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0M8Q6-1", "protein_name": "Immunoglobulin lambda constant 7", "gene_name": "IGLC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01834-1", "protein_name": "Immunoglobulin kappa constant", "gene_name": "IGKC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01859-2", "protein_name": "Immunoglobulin heavy constant gamma 2", "gene_name": "IGHG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG04-1", "protein_name": "Immunoglobulin lambda constant 1", "gene_name": "IGLC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DOY3-1", "protein_name": "Immunoglobulin lambda constant 3", "gene_name": "IGLC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV08-1", "protein_name": "5'-3' exonuclease PLD3", "gene_name": "PLD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01743-1", "protein_name": "Immunoglobulin heavy variable 1-46", "gene_name": "IGHV1-46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14573-1", "protein_name": "Inositol 1,4,5-trisphosphate-gated calcium channel ITPR3", "gene_name": "ITPR3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0C4DH73-1", "protein_name": "Immunoglobulin kappa variable 1-12", "gene_name": "IGKV1-12", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2NJV5-1", "protein_name": "Immunoglobulin kappa variable 2-29", "gene_name": "IGKV2-29", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01594-1", "protein_name": "Immunoglobulin kappa variable 1-33", "gene_name": "IGKV1-33", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04430-1", "protein_name": "Immunoglobulin kappa variable 1-16", "gene_name": "IGKV1-16", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01857-2", "protein_name": "Immunoglobulin heavy constant gamma 1", "gene_name": "IGHG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12318-1", "protein_name": "Low affinity immunoglobulin gamma Fc region receptor II-a", "gene_name": "FCGR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27986-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit alpha", "gene_name": "PIK3R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01700", "url": "https://www.uniprot.org/uniprotkb/P01700" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9973503", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 88 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mechanism of activation of Pak1 kinase by membrane localization.", "journal": "Oncogene", "date": "1999", "authors": "Lu W, Mayer BJ", "reference": { "type": "PubMed", "id": "9989831", "url": "https://pubmed.ncbi.nlm.nih.gov/9989831" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01700-1", "protein_name": "Immunoglobulin lambda variable 1-47", "gene_name": "IGLV1-47", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01714-1", "protein_name": "Immunoglobulin lambda variable 3-19", "gene_name": "IGLV3-19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P80748-1", "protein_name": "Immunoglobulin lambda variable 3-21", "gene_name": "IGLV3-21", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A075B6P5-1", "protein_name": "Immunoglobulin kappa variable 2-28", "gene_name": "IGKV2-28", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A075B6S6-1", "protein_name": "Immunoglobulin kappa variable 2D-30", "gene_name": "IGKV2D-30", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0C4DH25-1", "protein_name": "Immunoglobulin kappa variable 3D-20", "gene_name": "IGKV3D-20", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01593-1", "protein_name": "Immunoglobulin kappa variable 1D-33", "gene_name": "IGKV1D-33", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01599-1", "protein_name": "Immunoglobulin kappa variable 1-17", "gene_name": "IGKV1-17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01601-1", "protein_name": "Immunoglobulin kappa variable 1D-16", "gene_name": "IGKV1D-16", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01611-1", "protein_name": "Immunoglobulin kappa variable 1D-12", "gene_name": "IGKV1D-12", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01615-1", "protein_name": "Immunoglobulin kappa variable 2D-28", "gene_name": "IGKV2D-28", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01619-1", "protein_name": "Immunoglobulin kappa variable 3-20", "gene_name": "IGKV3-20", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01624-1", "protein_name": "Immunoglobulin kappa variable 3-15", "gene_name": "IGKV3-15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04433-1", "protein_name": "Immunoglobulin kappa variable 3-11", "gene_name": "IGKV3-11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01602-1", "protein_name": "Immunoglobulin kappa variable 1-5", "gene_name": "IGKV1-5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28482-1", "protein_name": "Mitogen-activated protein kinase 1", "gene_name": "MAPK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45984-1", "protein_name": "Mitogen-activated protein kinase 9", "gene_name": "MAPK9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13233-1", "protein_name": "Mitogen-activated protein kinase kinase kinase 1", "gene_name": "MAP3K1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13153-1", "protein_name": "Serine/threonine-protein kinase PAK 1", "gene_name": "PAK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13177-1", "protein_name": "Serine/threonine-protein kinase PAK 2", "gene_name": "PAK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01112-1", "protein_name": "GTPase HRas", "gene_name": "HRAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53779-1", "protein_name": "Mitogen-activated protein kinase 10", "gene_name": "MAPK10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43405-1", "protein_name": "Tyrosine-protein kinase SYK", "gene_name": "SYK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01362-1", "protein_name": "High affinity immunoglobulin epsilon receptor subunit beta", "gene_name": "MS4A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30273-1", "protein_name": "High affinity immunoglobulin epsilon receptor subunit gamma", "gene_name": "FCER1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01767-1", "protein_name": "Immunoglobulin heavy variable 3-53", "gene_name": "IGHV3-53", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06331-1", "protein_name": "Immunoglobulin heavy variable 4-34", "gene_name": "IGHV4-34", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01597-1", "protein_name": "Immunoglobulin kappa variable 1-39", "gene_name": "IGKV1-39", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06310-1", "protein_name": "Immunoglobulin kappa variable 2-30", "gene_name": "IGKV2-30", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06312-1", "protein_name": "Immunoglobulin kappa variable 4-1", "gene_name": "IGKV4-1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01614-1", "protein_name": "Immunoglobulin kappa variable 2D-40", "gene_name": "IGKV2D-40", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14733-1", "protein_name": "Dual specificity mitogen-activated protein kinase kinase 7", "gene_name": "MAP2K7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01111-1", "protein_name": "GTPase NRas", "gene_name": "NRAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DOY2-1", "protein_name": "Immunoglobulin lambda constant 2", "gene_name": "IGLC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75791-1", "protein_name": "GRB2-related adapter protein 2", "gene_name": "GRAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04432-1", "protein_name": "Immunoglobulin kappa variable 1D-39", "gene_name": "IGKV1D-39", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06315-1", "protein_name": "Immunoglobulin kappa variable 5-2", "gene_name": "IGKV5-2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01699-1", "protein_name": "Immunoglobulin lambda variable 1-44", "gene_name": "IGLV1-44", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01701-1", "protein_name": "Immunoglobulin lambda variable 1-51", "gene_name": "IGLV1-51", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01704-1", "protein_name": "Immunoglobulin lambda variable 2-14", "gene_name": "IGLV2-14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01706-1", "protein_name": "Immunoglobulin lambda variable 2-11", "gene_name": "IGLV2-11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01709-1", "protein_name": "Immunoglobulin lambda variable 2-8", "gene_name": "IGLV2-8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01717-1", "protein_name": "Immunoglobulin lambda variable 3-25", "gene_name": "IGLV3-25", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01721-1", "protein_name": "Immunoglobulin lambda variable 6-57", "gene_name": "IGLV6-57", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01703-1", "protein_name": "Immunoglobulin lambda variable 1-40", "gene_name": "IGLV1-40", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01705-1", "protein_name": "Immunoglobulin lambda variable 2-23", "gene_name": "IGLV2-23", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01715-1", "protein_name": "Immunoglobulin lambda variable 3-1", "gene_name": "IGLV3-1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01718-1", "protein_name": "Immunoglobulin lambda variable 3-27", "gene_name": "IGLV3-27", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04211-1", "protein_name": "Immunoglobulin lambda variable 7-43", "gene_name": "IGLV7-43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07889-1", "protein_name": "Son of sevenless homolog 1", "gene_name": "SOS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45985-1", "protein_name": "Dual specificity mitogen-activated protein kinase kinase 4", "gene_name": "MAP2K4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CF74-1", "protein_name": "Immunoglobulin lambda constant 6", "gene_name": "IGLC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52735-1", "protein_name": "Guanine nucleotide exchange factor VAV2", "gene_name": "VAV2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63000-1", "protein_name": "Ras-related C3 botulinum toxin substrate 1", "gene_name": "RAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07948-1", "protein_name": "Tyrosine-protein kinase Lyn", "gene_name": "LYN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16885-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2", "gene_name": "PLCG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKW4-1", "protein_name": "Guanine nucleotide exchange factor VAV3", "gene_name": "VAV3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45983-1", "protein_name": "Mitogen-activated protein kinase 8", "gene_name": "MAPK8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01825-1", "protein_name": "Immunoglobulin heavy variable 4-59", "gene_name": "IGHV4-59", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01817-1", "protein_name": "Immunoglobulin heavy variable 2-5", "gene_name": "IGHV2-5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01824-1", "protein_name": "Immunoglobulin heavy variable 4-39", "gene_name": "IGHV4-39", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23083-1", "protein_name": "Immunoglobulin heavy variable 1-2", "gene_name": "IGHV1-2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01742-1", "protein_name": "Immunoglobulin heavy variable 1-69", "gene_name": "IGHV1-69", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01768-1", "protein_name": "Immunoglobulin heavy variable 3-30", "gene_name": "IGHV3-30", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01814-1", "protein_name": "Immunoglobulin heavy variable 2-70", "gene_name": "IGHV2-70", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01772-1", "protein_name": "Immunoglobulin heavy variable 3-33", "gene_name": "IGHV3-33", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01762-1", "protein_name": "Immunoglobulin heavy variable 3-11", "gene_name": "IGHV3-11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01763-1", "protein_name": "Immunoglobulin heavy variable 3-48", "gene_name": "IGHV3-48", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01764-1", "protein_name": "Immunoglobulin heavy variable 3-23", "gene_name": "IGHV3-23", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01766-1", "protein_name": "Immunoglobulin heavy variable 3-13", "gene_name": "IGHV3-13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01780-1", "protein_name": "Immunoglobulin heavy variable 3-7", "gene_name": "IGHV3-7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01782-1", "protein_name": "Immunoglobulin heavy variable 3-9", "gene_name": "IGHV3-9", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0M8Q6-1", "protein_name": "Immunoglobulin lambda constant 7", "gene_name": "IGLC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01834-1", "protein_name": "Immunoglobulin kappa constant", "gene_name": "IGKC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG04-1", "protein_name": "Immunoglobulin lambda constant 1", "gene_name": "IGLC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DOY3-1", "protein_name": "Immunoglobulin lambda constant 3", "gene_name": "IGLC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13094-1", "protein_name": "Lymphocyte cytosolic protein 2", "gene_name": "LCP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27361-1", "protein_name": "Mitogen-activated protein kinase 3", "gene_name": "MAPK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01743-1", "protein_name": "Immunoglobulin heavy variable 1-46", "gene_name": "IGHV1-46", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01854-2", "protein_name": "Immunoglobulin heavy constant epsilon", "gene_name": "IGHE", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A0C4DH73-1", "protein_name": "Immunoglobulin kappa variable 1-12", "gene_name": "IGKV1-12", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2NJV5-1", "protein_name": "Immunoglobulin kappa variable 2-29", "gene_name": "IGKV2-29", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01594-1", "protein_name": "Immunoglobulin kappa variable 1-33", "gene_name": "IGKV1-33", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04430-1", "protein_name": "Immunoglobulin kappa variable 1-16", "gene_name": "IGKV1-16", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12319-1", "protein_name": "High affinity immunoglobulin epsilon receptor subunit alpha", "gene_name": "FCER1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01100-1", "protein_name": "Protein c-Fos", "gene_name": "FOS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05412-1", "protein_name": "Transcription factor Jun", "gene_name": "JUN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15498-1", "protein_name": "Proto-oncogene vav", "gene_name": "VAV1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01700", "url": "https://www.uniprot.org/uniprotkb/P01700" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9989831", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 89 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The amino acid sequence of a lambda type Bence-Jones protein. 3. The complete amino acid sequence and the location of the disulfide bridges.", "journal": "J. Biol. Chem.", "date": "1970", "authors": "Titani K, Wikler M, Shinoda T, Putnam F W", "reference": { "type": "PubMed", "id": "4909564", "url": "https://pubmed.ncbi.nlm.nih.gov/4909564" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01714-1", "protein_name": "Immunoglobulin lambda variable 3-19", "gene_name": "IGLV3-19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DOY2-1", "protein_name": "Immunoglobulin lambda constant 2", "gene_name": "IGLC2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01714", "url": "https://www.uniprot.org/uniprotkb/P01714" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.4909564", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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"gene_name": "SLC17A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZS9-1", "protein_name": "Carbohydrate sulfotransferase 5", "gene_name": "CHST5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX3-1", "protein_name": "Carbohydrate sulfotransferase 6", "gene_name": "CHST6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16112-1", "protein_name": "Aggrecan core protein", "gene_name": "ACAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE9-1", "protein_name": "N-acylneuraminate-9-phosphatase", "gene_name": "NANP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UQ49-1", "protein_name": "Sialidase-3", "gene_name": "NEU3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3R4-1", "protein_name": "Sialidase-2", "gene_name": "NEU2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99983-1", "protein_name": "Osteomodulin", "gene_name": "OMD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10619-1", "protein_name": "Lysosomal protective protein", 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2", "gene_name": "ST3GAL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ37-1", "protein_name": "Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2", "gene_name": "ST6GALNAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15907-1", "protein_name": "Beta-galactoside alpha-2,6-sialyltransferase 1", "gene_name": "ST6GAL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNP4-1", "protein_name": "Lactosylceramide alpha-2,3-sialyltransferase", "gene_name": "ST3GAL5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92185-1", "protein_name": "Alpha-N-acetylneuraminide alpha-2,8-sialyltransferase", "gene_name": "ST8SIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92186-1", "protein_name": "Alpha-2,8-sialyltransferase 8B", "gene_name": "ST8SIA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVH7-1", "protein_name": "Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5", "gene_name": "ST6GALNAC5", "tax_name": "Human" }, { 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"B3GALT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LGC8-1", "protein_name": "Carbohydrate sulfotransferase 3", "gene_name": "CHST3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60938-1", "protein_name": "Keratocan", "gene_name": "KERA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y274-1", "protein_name": "Type 2 lactosamine alpha-2,3-sialyltransferase", "gene_name": "ST3GAL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61647-1", "protein_name": "Alpha-2,8-sialyltransferase 8F", "gene_name": "ST8SIA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92187-1", "protein_name": "CMP-N-acetylneuraminate-poly-alpha-2,8-sialyltransferase", "gene_name": "ST8SIA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43173-1", "protein_name": "Alpha-N-acetylneuraminate alpha-2,8-sialyltransferase ST8SIA3", "gene_name": "ST8SIA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR45-1", "protein_name": "N-acetylneuraminate-9-phosphate synthase", "gene_name": "NANS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20774-1", "protein_name": "Mimecan", "gene_name": "OGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99519-1", "protein_name": "Sialidase-1", "gene_name": "NEU1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWR8-1", "protein_name": "Sialidase-4", "gene_name": "NEU4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51993-1", "protein_name": "4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase FUT6", "gene_name": "FUT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11128-1", "protein_name": "4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase FUT5", "gene_name": "FUT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q10981-1", "protein_name": "Galactoside alpha-(1,2)-fucosyltransferase 2", "gene_name": "FUT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60909-1", "protein_name": "Beta-1,4-galactosyltransferase 2", "gene_name": "B4GALT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96024-1", "protein_name": "Beta-1,3-galactosyltransferase 4", "gene_name": "B3GALT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y223-1", "protein_name": "Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase", "gene_name": "GNE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBX8-1", "protein_name": "Beta-1,4-galactosyltransferase 6", "gene_name": "B4GALT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60512-1", "protein_name": "Beta-1,4-galactosyltransferase 3", "gene_name": "B4GALT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15291-1", "protein_name": "Beta-1,4-galactosyltransferase 1", "gene_name": "B4GALT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFL0-1", "protein_name": "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7", "gene_name": "B3GNT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2A9-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3", "gene_name": "B3GNT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51888-1", "protein_name": "Prolargin", "gene_name": "PRELP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFW8-1", "protein_name": "N-acylneuraminate cytidylyltransferase", "gene_name": "CMAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9C0J1-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4", "gene_name": "B3GNT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21217-1", "protein_name": "3-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferase FUT3", "gene_name": "FUT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22083-1", "protein_name": "Alpha-(1,3)-fucosyltransferase 4", "gene_name": "FUT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11130-1", "protein_name": "Alpha-(1,3)-fucosyltransferase 7", "gene_name": "FUT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y231-1", "protein_name": "4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9", "gene_name": "FUT9", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P51884", "url": "https://www.uniprot.org/uniprotkb/P51884" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10206952", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 69 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cloning and characterization of a mammalian N-acetylglucosamine-6-sulfotransferase that is highly restricted to intestinal tissue.", "journal": "Biochemical and biophysical research communications", "date": "1999", "authors": "Lee JK, Bhakta S, Rosen SD, Hemmerich S", "reference": { "type": "PubMed", "id": "10491328", "url": "https://pubmed.ncbi.nlm.nih.gov/10491328" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43916-1", "protein_name": "Carbohydrate sulfotransferase 1", "gene_name": "CHST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06828-1", "protein_name": "Fibromodulin", "gene_name": "FMOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4C5-1", "protein_name": "Carbohydrate sulfotransferase 2", "gene_name": "CHST2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZS9-1", "protein_name": "Carbohydrate sulfotransferase 5", "gene_name": "CHST5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX3-1", "protein_name": "Carbohydrate sulfotransferase 6", "gene_name": "CHST6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16112-1", "protein_name": "Aggrecan core protein", "gene_name": "ACAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99983-1", "protein_name": "Osteomodulin", "gene_name": "OMD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76EJ3-1", "protein_name": "Nucleotide sugar transporter SLC35D2", "gene_name": "SLC35D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11201-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1", "gene_name": "ST3GAL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11206-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4", "gene_name": "ST3GAL4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16842-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2", "gene_name": "ST3GAL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11203-1", "protein_name": "CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase", "gene_name": "ST3GAL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43505-1", "protein_name": "Beta-1,4-glucuronyltransferase 1", "gene_name": "B4GAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY97-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2", "gene_name": "B3GNT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60513-1", "protein_name": "Beta-1,4-galactosyltransferase 4", "gene_name": "B4GALT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43286-1", "protein_name": "Beta-1,4-galactosyltransferase 5", "gene_name": "B4GALT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LGC8-1", "protein_name": "Carbohydrate sulfotransferase 3", "gene_name": "CHST3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60938-1", "protein_name": "Keratocan", "gene_name": "KERA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y274-1", "protein_name": "Type 2 lactosamine alpha-2,3-sialyltransferase", "gene_name": "ST3GAL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20774-1", "protein_name": "Mimecan", "gene_name": "OGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60909-1", "protein_name": "Beta-1,4-galactosyltransferase 2", "gene_name": "B4GALT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBX8-1", "protein_name": "Beta-1,4-galactosyltransferase 6", "gene_name": "B4GALT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60512-1", "protein_name": "Beta-1,4-galactosyltransferase 3", "gene_name": "B4GALT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15291-1", "protein_name": "Beta-1,4-galactosyltransferase 1", "gene_name": "B4GALT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFL0-1", "protein_name": "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7", "gene_name": "B3GNT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2A9-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3", "gene_name": "B3GNT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51888-1", "protein_name": "Prolargin", "gene_name": "PRELP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9C0J1-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4", "gene_name": "B3GNT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9QUP4-1", "protein_name": "Carbohydrate sulfotransferase 5", "gene_name": "Chst5", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P51884", "url": "https://www.uniprot.org/uniprotkb/P51884" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10491328", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 30 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular cloning and expression of Galbeta1,3GalNAc alpha2, 3-sialyltransferase from human fetal liver.", "journal": "European journal of biochemistry", "date": "1999", "authors": "Shang J, Qiu R, Wang J, Liu J, Zhou R, Ding H, Yang S, Zhang S, Jin C", "reference": { "type": "PubMed", "id": "10504389", "url": "https://pubmed.ncbi.nlm.nih.gov/10504389" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78382-1", "protein_name": "CMP-sialic acid transporter", "gene_name": "SLC35A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15466-1", "protein_name": "Alpha-2,8-sialyltransferase 8E", "gene_name": "ST8SIA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXD5-1", "protein_name": "N-acetylneuraminate lyase", "gene_name": "NPL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H195-1", "protein_name": "Mucin-3B", "gene_name": "MUC3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43916-1", "protein_name": "Carbohydrate sulfotransferase 1", "gene_name": "CHST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06828-1", "protein_name": "Fibromodulin", "gene_name": "FMOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4C5-1", "protein_name": "Carbohydrate sulfotransferase 2", "gene_name": "CHST2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRA2-1", "protein_name": "Sialin", "gene_name": "SLC17A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZS9-1", "protein_name": "Carbohydrate sulfotransferase 5", "gene_name": "CHST5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX3-1", "protein_name": "Carbohydrate sulfotransferase 6", "gene_name": "CHST6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16112-1", "protein_name": "Aggrecan core protein", "gene_name": "ACAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE9-1", "protein_name": "N-acylneuraminate-9-phosphatase", "gene_name": "NANP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UQ49-1", "protein_name": "Sialidase-3", "gene_name": "NEU3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3R4-1", "protein_name": "Sialidase-2", "gene_name": "NEU2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99983-1", "protein_name": "Osteomodulin", "gene_name": "OMD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10619-1", "protein_name": "Lysosomal protective protein", "gene_name": "CTSA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76EJ3-1", "protein_name": "Nucleotide sugar transporter SLC35D2", "gene_name": "SLC35D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11201-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1", "gene_name": "ST3GAL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NSC7-1", "protein_name": "Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1", "gene_name": "ST6GALNAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11206-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4", "gene_name": "ST3GAL4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NDV1-1", "protein_name": "Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3", "gene_name": "ST6GALNAC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16842-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2", "gene_name": "ST3GAL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ37-1", "protein_name": "Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2", "gene_name": "ST6GALNAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15907-1", "protein_name": "Beta-galactoside alpha-2,6-sialyltransferase 1", "gene_name": "ST6GAL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNP4-1", "protein_name": "Lactosylceramide alpha-2,3-sialyltransferase", "gene_name": "ST3GAL5", "tax_name": "Human" }, { 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"protein_name": "Alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase", "gene_name": "ST6GALNAC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43505-1", "protein_name": "Beta-1,4-glucuronyltransferase 1", "gene_name": "B4GAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16278-1", "protein_name": "Beta-galactosidase", "gene_name": "GLB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY97-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2", "gene_name": "B3GNT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60513-1", "protein_name": "Beta-1,4-galactosyltransferase 4", "gene_name": "B4GALT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43286-1", "protein_name": "Beta-1,4-galactosyltransferase 5", "gene_name": "B4GALT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LGC8-1", "protein_name": "Carbohydrate sulfotransferase 3", "gene_name": "CHST3", "tax_name": "Human" 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"protein_name": "Mimecan", "gene_name": "OGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCL4-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 6", "gene_name": "GALNT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCQ5-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 9", "gene_name": "GALNT9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q10472-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 1", "gene_name": "GALNT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY28-1", "protein_name": "Probable polypeptide N-acetylgalactosaminyltransferase 8", "gene_name": "GALNT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IS24-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 17", "gene_name": "GALNT17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z7M9-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 5", "gene_name": "GALNT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q10471-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 2", "gene_name": "GALNT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4A0-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 4", "gene_name": "GALNT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02817-1", "protein_name": "Mucin-2", "gene_name": "MUC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TAX7-1", "protein_name": "Mucin-7", "gene_name": "MUC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCW6-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 11", "gene_name": "GALNT11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SF2-1", "protein_name": "N-acetylgalactosaminyltransferase 7", "gene_name": "GALNT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUC8-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 13", "gene_name": "GALNT13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FL9-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 14", "gene_name": "GALNT14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02742-1", "protein_name": "Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase", "gene_name": "GCNT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60909-1", "protein_name": "Beta-1,4-galactosyltransferase 2", "gene_name": "B4GALT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UX72-1", "protein_name": "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9", "gene_name": "B3GNT9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBX8-1", "protein_name": "Beta-1,4-galactosyltransferase 6", "gene_name": "B4GALT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q67FW5-1", "protein_name": "Queuosine-tRNA galactosyltransferase", "gene_name": "QTGAL", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60512-1", "protein_name": "Beta-1,4-galactosyltransferase 3", "gene_name": "B4GALT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15291-1", "protein_name": "Beta-1,4-galactosyltransferase 1", "gene_name": "B4GALT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z7M8-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 8", "gene_name": "B3GNT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFL0-1", "protein_name": "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7", "gene_name": "B3GNT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2A9-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3", "gene_name": "B3GNT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BYG0-1", "protein_name": "Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase", "gene_name": "B3GNT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NS00-1", "protein_name": "Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1", "gene_name": "C1GALT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EU7-1", "protein_name": "C1GALT1-specific chaperone 1", "gene_name": "C1GALT1C1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N387-1", "protein_name": "Mucin-15", "gene_name": "MUC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N307-1", "protein_name": "Mucin-20", "gene_name": "MUC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H3R2-1", "protein_name": "Mucin-13", "gene_name": "MUC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z5P9-1", "protein_name": "Mucin-19", "gene_name": "MUC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6W4X9-1", "protein_name": "Mucin-6", "gene_name": "MUC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51888-1", "protein_name": "Prolargin", "gene_name": "PRELP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZMB0-1", "protein_name": "Acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase", "gene_name": "B3GNT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9C0J1-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4", "gene_name": "B3GNT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P109-1", "protein_name": "Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4", "gene_name": "GCNT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q49A17-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase-like 6", "gene_name": "GALNTL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95395-1", "protein_name": "Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3", "gene_name": "GCNT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZNI0-1", "protein_name": "Probable beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 7", "gene_name": "GCNT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4T8-1", "protein_name": "Inactive polypeptide N-acetylgalactosaminyltransferase-like protein 5", "gene_name": "GALNTL5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N3T1-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 15", "gene_name": "GALNT15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI7-1", "protein_name": "Mucin-16", "gene_name": "MUC16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5SSG8-1", "protein_name": "Mucin-21", "gene_name": "MUC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q685J3-1", "protein_name": "Mucin-17", "gene_name": "MUC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02505-1", "protein_name": "Mucin-3A", "gene_name": "MUC3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKN1-1", "protein_name": "Mucin-12", "gene_name": "MUC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNA3-1", "protein_name": "Alpha-1,4-N-acetylglucosaminyltransferase", "gene_name": "A4GNT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15941-1", "protein_name": "Mucin-1", "gene_name": "MUC1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P51884", "url": "https://www.uniprot.org/uniprotkb/P51884" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11042166", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 80 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Functional expression and genomic structure of human N-acetylglucosamine-6-O-sulfotransferase that transfers sulfate to beta-N-acetylglucosamine at the nonreducing end of an N-acetyllactosamine sequence.", "journal": "Biochimica et biophysica acta", "date": "2000", "authors": "Sakaguchi H, Kitagawa H, Sugahara K", "reference": { "type": "PubMed", "id": "11042394", "url": "https://pubmed.ncbi.nlm.nih.gov/11042394" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43916-1", "protein_name": "Carbohydrate sulfotransferase 1", "gene_name": "CHST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06828-1", "protein_name": "Fibromodulin", "gene_name": "FMOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4C5-1", "protein_name": "Carbohydrate sulfotransferase 2", "gene_name": "CHST2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZS9-1", "protein_name": "Carbohydrate sulfotransferase 5", "gene_name": "CHST5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX3-1", "protein_name": "Carbohydrate sulfotransferase 6", "gene_name": "CHST6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16112-1", "protein_name": "Aggrecan core protein", "gene_name": "ACAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99983-1", "protein_name": "Osteomodulin", "gene_name": "OMD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76EJ3-1", "protein_name": "Nucleotide sugar transporter SLC35D2", "gene_name": "SLC35D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11201-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1", "gene_name": "ST3GAL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11206-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4", "gene_name": "ST3GAL4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16842-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2", "gene_name": "ST3GAL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11203-1", "protein_name": "CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase", "gene_name": "ST3GAL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43505-1", "protein_name": "Beta-1,4-glucuronyltransferase 1", "gene_name": "B4GAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY97-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2", "gene_name": "B3GNT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60513-1", "protein_name": "Beta-1,4-galactosyltransferase 4", "gene_name": "B4GALT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43286-1", "protein_name": "Beta-1,4-galactosyltransferase 5", "gene_name": "B4GALT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LGC8-1", "protein_name": "Carbohydrate sulfotransferase 3", "gene_name": "CHST3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60938-1", "protein_name": "Keratocan", "gene_name": "KERA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y274-1", "protein_name": "Type 2 lactosamine alpha-2,3-sialyltransferase", "gene_name": "ST3GAL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20774-1", "protein_name": "Mimecan", "gene_name": "OGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60909-1", "protein_name": "Beta-1,4-galactosyltransferase 2", "gene_name": "B4GALT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBX8-1", "protein_name": "Beta-1,4-galactosyltransferase 6", "gene_name": "B4GALT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60512-1", "protein_name": "Beta-1,4-galactosyltransferase 3", "gene_name": "B4GALT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15291-1", "protein_name": "Beta-1,4-galactosyltransferase 1", "gene_name": "B4GALT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFL0-1", "protein_name": "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7", "gene_name": "B3GNT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2A9-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3", "gene_name": "B3GNT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51888-1", "protein_name": "Prolargin", "gene_name": "PRELP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9C0J1-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4", "gene_name": "B3GNT4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P51884", "url": "https://www.uniprot.org/uniprotkb/P51884" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11042394", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 29 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular cloning and characterization of UDP-GlcNAc:lactosylceramide beta 1,3-N-acetylglucosaminyltransferase (beta 3Gn-T5), an essential enzyme for the expression of HNK-1 and Lewis X epitopes on glycolipids.", "journal": "The Journal of biological chemistry", "date": "2001", "authors": "Togayachi A, Akashima T, Ookubo R, Kudo T, Nishihara S, Iwasaki H, Natsume A, Mio H, Inokuchi J, Irimura T, Sasaki K, Narimatsu H", "reference": { "type": "PubMed", "id": "11283017", "url": "https://pubmed.ncbi.nlm.nih.gov/11283017" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15466-1", "protein_name": "Alpha-2,8-sialyltransferase 8E", "gene_name": "ST8SIA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H195-1", "protein_name": "Mucin-3B", "gene_name": "MUC3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43916-1", "protein_name": "Carbohydrate sulfotransferase 1", "gene_name": "CHST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14435-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 3", "gene_name": "GALNT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99NB2-1", "protein_name": "Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase", "gene_name": "B3gnt5", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q06828-1", "protein_name": "Fibromodulin", "gene_name": "FMOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P9A2-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 18", "gene_name": "GALNT18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SR1-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 10", "gene_name": "GALNT10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IXK2-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 12", "gene_name": "GALNT12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N428-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 16", "gene_name": "GALNT16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4C5-1", "protein_name": "Carbohydrate sulfotransferase 2", "gene_name": "CHST2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCG5-1", "protein_name": "Carbohydrate sulfotransferase 4", "gene_name": "CHST4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZS9-1", "protein_name": "Carbohydrate sulfotransferase 5", "gene_name": "CHST5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX3-1", "protein_name": "Carbohydrate sulfotransferase 6", "gene_name": "CHST6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16112-1", "protein_name": "Aggrecan core protein", "gene_name": "ACAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99983-1", "protein_name": "Osteomodulin", "gene_name": "OMD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76EJ3-1", "protein_name": "Nucleotide sugar transporter SLC35D2", "gene_name": "SLC35D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11201-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1", "gene_name": "ST3GAL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11206-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4", "gene_name": "ST3GAL4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16842-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2", "gene_name": "ST3GAL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNP4-1", "protein_name": "Lactosylceramide alpha-2,3-sialyltransferase", "gene_name": "ST3GAL5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75752-1", "protein_name": "UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1", "gene_name": "B3GALNT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVH7-1", "protein_name": "Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5", "gene_name": "ST6GALNAC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11203-1", "protein_name": "CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase", "gene_name": "ST3GAL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q969X2-1", "protein_name": "Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6", "gene_name": "ST6GALNAC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43505-1", "protein_name": "Beta-1,4-glucuronyltransferase 1", "gene_name": "B4GAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY97-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2", "gene_name": "B3GNT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60513-1", "protein_name": "Beta-1,4-galactosyltransferase 4", "gene_name": "B4GALT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43286-1", "protein_name": "Beta-1,4-galactosyltransferase 5", "gene_name": "B4GALT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16880-1", "protein_name": "2-hydroxyacylsphingosine 1-beta-galactosyltransferase", "gene_name": "UGT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16739-1", "protein_name": "Ceramide glucosyltransferase", "gene_name": "UGCG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LGC8-1", "protein_name": "Carbohydrate sulfotransferase 3", "gene_name": "CHST3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCT0-1", "protein_name": "Ceramide kinase", "gene_name": "CERK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99102-1", "protein_name": "Mucin-4", "gene_name": "MUC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DR8-1", "protein_name": "Mucin-like protein 1", "gene_name": "MUCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P98088-1", "protein_name": "Mucin-5AC", "gene_name": "MUC5AC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC84-1", "protein_name": "Mucin-5B", "gene_name": "MUC5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60938-1", "protein_name": "Keratocan", "gene_name": "KERA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y274-1", "protein_name": "Type 2 lactosamine alpha-2,3-sialyltransferase", "gene_name": "ST3GAL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20774-1", "protein_name": "Mimecan", "gene_name": "OGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCL4-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 6", "gene_name": "GALNT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCQ5-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 9", "gene_name": "GALNT9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q10472-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 1", "gene_name": "GALNT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY28-1", "protein_name": "Probable polypeptide N-acetylgalactosaminyltransferase 8", "gene_name": "GALNT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IS24-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 17", "gene_name": "GALNT17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z7M9-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 5", "gene_name": "GALNT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q10471-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 2", "gene_name": "GALNT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4A0-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 4", "gene_name": "GALNT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02817-1", "protein_name": "Mucin-2", "gene_name": "MUC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TAX7-1", "protein_name": "Mucin-7", "gene_name": "MUC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8BGY6-1", "protein_name": "Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase", "gene_name": "B3gnt5", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q99999-1", "protein_name": "Galactosylceramide sulfotransferase", "gene_name": "GAL3ST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19526-1", "protein_name": "Galactoside alpha-(1,2)-fucosyltransferase 1", "gene_name": "FUT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q10981-1", "protein_name": "Galactoside alpha-(1,2)-fucosyltransferase 2", "gene_name": "FUT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCW6-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 11", "gene_name": "GALNT11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SF2-1", "protein_name": "N-acetylgalactosaminyltransferase 7", "gene_name": "GALNT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUC8-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 13", "gene_name": "GALNT13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FL9-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 14", "gene_name": "GALNT14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02742-1", "protein_name": "Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase", "gene_name": "GCNT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60909-1", "protein_name": "Beta-1,4-galactosyltransferase 2", "gene_name": "B4GALT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96024-1", "protein_name": "Beta-1,3-galactosyltransferase 4", "gene_name": "B3GALT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UX72-1", "protein_name": "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9", "gene_name": "B3GNT9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBX8-1", "protein_name": "Beta-1,4-galactosyltransferase 6", "gene_name": "B4GALT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q67FW5-1", "protein_name": "Queuosine-tRNA galactosyltransferase", "gene_name": "QTGAL", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60512-1", "protein_name": "Beta-1,4-galactosyltransferase 3", "gene_name": "B4GALT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15291-1", "protein_name": "Beta-1,4-galactosyltransferase 1", "gene_name": "B4GALT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z7M8-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 8", "gene_name": "B3GNT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFL0-1", "protein_name": "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7", "gene_name": "B3GNT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2A9-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3", "gene_name": "B3GNT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BYG0-1", "protein_name": "Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase", "gene_name": "B3GNT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NS00-1", "protein_name": "Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1", "gene_name": "C1GALT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EU7-1", "protein_name": "C1GALT1-specific chaperone 1", "gene_name": "C1GALT1C1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N387-1", "protein_name": "Mucin-15", "gene_name": "MUC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N307-1", "protein_name": "Mucin-20", "gene_name": "MUC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H3R2-1", "protein_name": "Mucin-13", "gene_name": "MUC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z5P9-1", "protein_name": "Mucin-19", "gene_name": "MUC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6W4X9-1", "protein_name": "Mucin-6", "gene_name": "MUC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51888-1", "protein_name": "Prolargin", "gene_name": "PRELP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00973-1", "protein_name": "Beta-1,4 N-acetylgalactosaminyltransferase 1", "gene_name": "B4GALNT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZMB0-1", "protein_name": "Acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase", "gene_name": "B3GNT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9C0J1-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4", "gene_name": "B3GNT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P109-1", "protein_name": "Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4", "gene_name": "GCNT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q49A17-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase-like 6", "gene_name": "GALNTL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95395-1", "protein_name": "Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3", "gene_name": "GCNT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZNI0-1", "protein_name": "Probable beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 7", "gene_name": "GCNT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4T8-1", "protein_name": "Inactive polypeptide N-acetylgalactosaminyltransferase-like protein 5", "gene_name": "GALNTL5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N3T1-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 15", "gene_name": "GALNT15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI7-1", "protein_name": "Mucin-16", "gene_name": "MUC16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5SSG8-1", "protein_name": "Mucin-21", "gene_name": "MUC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q685J3-1", "protein_name": "Mucin-17", "gene_name": "MUC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02505-1", "protein_name": "Mucin-3A", "gene_name": "MUC3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKN1-1", "protein_name": "Mucin-12", "gene_name": "MUC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPC4-1", "protein_name": "Lactosylceramide 4-alpha-galactosyltransferase", "gene_name": "A4GALT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNA3-1", "protein_name": "Alpha-1,4-N-acetylglucosaminyltransferase", "gene_name": "A4GNT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15941-1", "protein_name": "Mucin-1", "gene_name": "MUC1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P51884", "url": "https://www.uniprot.org/uniprotkb/P51884" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11283017", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 96 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Galactosylation of N-linked oligosaccharides by human beta-1,4-galactosyltransferases I, II, III, IV, V, and VI expressed in Sf-9 cells.", "journal": "Glycobiology", "date": "2001", "authors": "Guo S, Sato T, Shirane K, Furukawa K", "reference": { "type": "PubMed", "id": "11588157", "url": "https://pubmed.ncbi.nlm.nih.gov/11588157" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43916-1", "protein_name": "Carbohydrate sulfotransferase 1", "gene_name": "CHST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06828-1", "protein_name": "Fibromodulin", "gene_name": "FMOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09328-1", "protein_name": "Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A", "gene_name": "MGAT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4C5-1", "protein_name": "Carbohydrate sulfotransferase 2", "gene_name": "CHST2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZS9-1", "protein_name": "Carbohydrate sulfotransferase 5", "gene_name": "CHST5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX3-1", "protein_name": "Carbohydrate sulfotransferase 6", "gene_name": "CHST6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16112-1", "protein_name": "Aggrecan core protein", "gene_name": "ACAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99983-1", "protein_name": "Osteomodulin", "gene_name": "OMD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76EJ3-1", "protein_name": "Nucleotide sugar transporter SLC35D2", "gene_name": "SLC35D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11201-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1", "gene_name": "ST3GAL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11206-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4", "gene_name": "ST3GAL4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16842-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2", "gene_name": "ST3GAL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15907-1", "protein_name": "Beta-galactoside alpha-2,6-sialyltransferase 1", "gene_name": "ST6GAL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92186-1", "protein_name": "Alpha-2,8-sialyltransferase 8B", "gene_name": "ST8SIA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11203-1", "protein_name": "CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase", "gene_name": "ST3GAL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43505-1", "protein_name": "Beta-1,4-glucuronyltransferase 1", "gene_name": "B4GAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY97-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2", "gene_name": "B3GNT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60513-1", "protein_name": "Beta-1,4-galactosyltransferase 4", "gene_name": "B4GALT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43286-1", "protein_name": "Beta-1,4-galactosyltransferase 5", "gene_name": "B4GALT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LGC8-1", "protein_name": "Carbohydrate sulfotransferase 3", "gene_name": "CHST3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60938-1", "protein_name": "Keratocan", "gene_name": "KERA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y274-1", "protein_name": "Type 2 lactosamine alpha-2,3-sialyltransferase", "gene_name": "ST3GAL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61647-1", "protein_name": "Alpha-2,8-sialyltransferase 8F", "gene_name": "ST8SIA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43173-1", "protein_name": "Alpha-N-acetylneuraminate alpha-2,8-sialyltransferase ST8SIA3", "gene_name": "ST8SIA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20774-1", "protein_name": "Mimecan", "gene_name": "OGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60909-1", "protein_name": "Beta-1,4-galactosyltransferase 2", "gene_name": "B4GALT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBX8-1", "protein_name": "Beta-1,4-galactosyltransferase 6", "gene_name": "B4GALT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60512-1", "protein_name": "Beta-1,4-galactosyltransferase 3", "gene_name": "B4GALT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15291-1", "protein_name": "Beta-1,4-galactosyltransferase 1", "gene_name": "B4GALT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFL0-1", "protein_name": "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7", "gene_name": "B3GNT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2A9-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3", "gene_name": "B3GNT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51888-1", "protein_name": "Prolargin", "gene_name": "PRELP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9C0J1-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4", "gene_name": "B3GNT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UQ53-1", "protein_name": "Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B", "gene_name": "MGAT4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBM8-1", "protein_name": "Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C", "gene_name": "MGAT4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM21-1", "protein_name": "Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A", "gene_name": "MGAT4A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P51884", "url": "https://www.uniprot.org/uniprotkb/P51884" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11588157", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 37 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular cloning and characterization of a novel UDP-GlcNAc:GalNAc-peptide beta1,3-N-acetylglucosaminyltransferase (beta 3Gn-T6), an enzyme synthesizing the core 3 structure of O-glycans.", "journal": "The Journal of biological chemistry", "date": "2002", "authors": "Iwai T, Inaba N, Naundorf A, Zhang Y, Gotoh M, Iwasaki H, Kudo T, Togayachi A, Ishizuka Y, Nakanishi H, Narimatsu H", "reference": { "type": "PubMed", "id": "11821425", "url": "https://pubmed.ncbi.nlm.nih.gov/11821425" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H195-1", "protein_name": "Mucin-3B", "gene_name": "MUC3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43916-1", "protein_name": "Carbohydrate sulfotransferase 1", "gene_name": "CHST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14435-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 3", "gene_name": "GALNT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06828-1", "protein_name": "Fibromodulin", "gene_name": "FMOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P9A2-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 18", "gene_name": "GALNT18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SR1-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 10", "gene_name": "GALNT10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IXK2-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 12", "gene_name": "GALNT12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N428-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 16", "gene_name": "GALNT16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4C5-1", "protein_name": "Carbohydrate sulfotransferase 2", "gene_name": "CHST2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCG5-1", "protein_name": "Carbohydrate sulfotransferase 4", "gene_name": "CHST4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZS9-1", "protein_name": "Carbohydrate sulfotransferase 5", "gene_name": "CHST5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX3-1", "protein_name": "Carbohydrate sulfotransferase 6", "gene_name": "CHST6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16112-1", "protein_name": "Aggrecan core protein", "gene_name": "ACAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99983-1", "protein_name": "Osteomodulin", "gene_name": "OMD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76EJ3-1", "protein_name": "Nucleotide sugar transporter SLC35D2", "gene_name": "SLC35D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11201-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1", "gene_name": "ST3GAL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11206-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4", "gene_name": "ST3GAL4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16842-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2", "gene_name": "ST3GAL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11203-1", "protein_name": "CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase", "gene_name": "ST3GAL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43505-1", "protein_name": "Beta-1,4-glucuronyltransferase 1", "gene_name": "B4GAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY97-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2", "gene_name": "B3GNT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60513-1", "protein_name": "Beta-1,4-galactosyltransferase 4", "gene_name": "B4GALT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43286-1", "protein_name": "Beta-1,4-galactosyltransferase 5", "gene_name": "B4GALT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LGC8-1", "protein_name": "Carbohydrate sulfotransferase 3", "gene_name": "CHST3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99102-1", "protein_name": "Mucin-4", "gene_name": "MUC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DR8-1", "protein_name": "Mucin-like protein 1", "gene_name": "MUCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P98088-1", "protein_name": "Mucin-5AC", "gene_name": "MUC5AC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC84-1", "protein_name": "Mucin-5B", "gene_name": "MUC5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60938-1", "protein_name": "Keratocan", "gene_name": "KERA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y274-1", "protein_name": "Type 2 lactosamine alpha-2,3-sialyltransferase", "gene_name": "ST3GAL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20774-1", "protein_name": "Mimecan", "gene_name": "OGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCL4-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 6", "gene_name": "GALNT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCQ5-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 9", "gene_name": "GALNT9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q10472-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 1", "gene_name": "GALNT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY28-1", "protein_name": "Probable polypeptide N-acetylgalactosaminyltransferase 8", "gene_name": "GALNT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IS24-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 17", "gene_name": "GALNT17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z7M9-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 5", "gene_name": "GALNT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q10471-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 2", "gene_name": "GALNT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4A0-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 4", "gene_name": "GALNT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02817-1", "protein_name": "Mucin-2", "gene_name": "MUC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TAX7-1", "protein_name": "Mucin-7", "gene_name": "MUC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCW6-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 11", "gene_name": "GALNT11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SF2-1", "protein_name": "N-acetylgalactosaminyltransferase 7", "gene_name": "GALNT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUC8-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 13", "gene_name": "GALNT13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FL9-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 14", "gene_name": "GALNT14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02742-1", "protein_name": "Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase", "gene_name": "GCNT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60909-1", "protein_name": "Beta-1,4-galactosyltransferase 2", "gene_name": "B4GALT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UX72-1", "protein_name": "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9", "gene_name": "B3GNT9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBX8-1", "protein_name": "Beta-1,4-galactosyltransferase 6", "gene_name": "B4GALT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q67FW5-1", "protein_name": "Queuosine-tRNA galactosyltransferase", "gene_name": "QTGAL", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60512-1", "protein_name": "Beta-1,4-galactosyltransferase 3", "gene_name": "B4GALT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15291-1", "protein_name": "Beta-1,4-galactosyltransferase 1", "gene_name": "B4GALT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z7M8-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 8", "gene_name": "B3GNT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFL0-1", "protein_name": "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7", "gene_name": "B3GNT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2A9-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3", "gene_name": "B3GNT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BYG0-1", "protein_name": "Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase", "gene_name": "B3GNT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NS00-1", "protein_name": "Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1", "gene_name": "C1GALT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EU7-1", "protein_name": "C1GALT1-specific chaperone 1", "gene_name": "C1GALT1C1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N387-1", "protein_name": "Mucin-15", "gene_name": "MUC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N307-1", "protein_name": "Mucin-20", "gene_name": "MUC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H3R2-1", "protein_name": "Mucin-13", "gene_name": "MUC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z5P9-1", "protein_name": "Mucin-19", "gene_name": "MUC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6W4X9-1", "protein_name": "Mucin-6", "gene_name": "MUC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51888-1", "protein_name": "Prolargin", "gene_name": "PRELP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZMB0-1", "protein_name": "Acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase", "gene_name": "B3GNT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9C0J1-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4", "gene_name": "B3GNT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P109-1", "protein_name": "Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4", "gene_name": "GCNT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q49A17-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase-like 6", "gene_name": "GALNTL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95395-1", "protein_name": "Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3", "gene_name": "GCNT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZNI0-1", "protein_name": "Probable beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 7", "gene_name": "GCNT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4T8-1", "protein_name": "Inactive polypeptide N-acetylgalactosaminyltransferase-like protein 5", "gene_name": "GALNTL5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N3T1-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 15", "gene_name": "GALNT15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI7-1", "protein_name": "Mucin-16", "gene_name": "MUC16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5SSG8-1", "protein_name": "Mucin-21", "gene_name": "MUC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q685J3-1", "protein_name": "Mucin-17", "gene_name": "MUC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02505-1", "protein_name": "Mucin-3A", "gene_name": "MUC3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKN1-1", "protein_name": "Mucin-12", "gene_name": "MUC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNA3-1", "protein_name": "Alpha-1,4-N-acetylglucosaminyltransferase", "gene_name": "A4GNT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15941-1", "protein_name": "Mucin-1", "gene_name": "MUC1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P51884", "url": "https://www.uniprot.org/uniprotkb/P51884" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11821425", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 80 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Deficiency of UDP-galactose:N-acetylglucosamine beta-1,4-galactosyltransferase I causes the congenital disorder of glycosylation type IId.", "journal": "The Journal of clinical investigation", "date": "2002", "authors": "Hansske B, Thiel C, Lubke T, Hasilik M, Honing S, Peters V, Heidemann PH, Hoffmann GF, Berger EG, von Figura K, Korner C", "reference": { "type": "PubMed", "id": "11901181", "url": "https://pubmed.ncbi.nlm.nih.gov/11901181" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43916-1", "protein_name": "Carbohydrate sulfotransferase 1", "gene_name": "CHST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06828-1", "protein_name": "Fibromodulin", "gene_name": "FMOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09328-1", "protein_name": "Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A", "gene_name": "MGAT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4C5-1", "protein_name": "Carbohydrate sulfotransferase 2", "gene_name": "CHST2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZS9-1", "protein_name": "Carbohydrate sulfotransferase 5", "gene_name": "CHST5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX3-1", "protein_name": "Carbohydrate sulfotransferase 6", "gene_name": "CHST6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16112-1", "protein_name": "Aggrecan core protein", "gene_name": "ACAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99983-1", "protein_name": "Osteomodulin", "gene_name": "OMD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76EJ3-1", "protein_name": "Nucleotide sugar transporter SLC35D2", "gene_name": "SLC35D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11201-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1", "gene_name": "ST3GAL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11206-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4", "gene_name": "ST3GAL4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16842-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2", "gene_name": "ST3GAL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15907-1", "protein_name": "Beta-galactoside alpha-2,6-sialyltransferase 1", "gene_name": "ST6GAL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92186-1", "protein_name": "Alpha-2,8-sialyltransferase 8B", "gene_name": "ST8SIA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11203-1", "protein_name": "CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase", "gene_name": "ST3GAL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43505-1", "protein_name": "Beta-1,4-glucuronyltransferase 1", "gene_name": "B4GAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY97-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2", "gene_name": "B3GNT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60513-1", "protein_name": "Beta-1,4-galactosyltransferase 4", "gene_name": "B4GALT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43286-1", "protein_name": "Beta-1,4-galactosyltransferase 5", "gene_name": "B4GALT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LGC8-1", "protein_name": "Carbohydrate sulfotransferase 3", "gene_name": "CHST3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60938-1", "protein_name": "Keratocan", "gene_name": "KERA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y274-1", "protein_name": "Type 2 lactosamine alpha-2,3-sialyltransferase", "gene_name": "ST3GAL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61647-1", "protein_name": "Alpha-2,8-sialyltransferase 8F", "gene_name": "ST8SIA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43173-1", "protein_name": "Alpha-N-acetylneuraminate alpha-2,8-sialyltransferase ST8SIA3", "gene_name": "ST8SIA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20774-1", "protein_name": "Mimecan", "gene_name": "OGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60909-1", "protein_name": "Beta-1,4-galactosyltransferase 2", "gene_name": "B4GALT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBX8-1", "protein_name": "Beta-1,4-galactosyltransferase 6", "gene_name": "B4GALT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60512-1", "protein_name": "Beta-1,4-galactosyltransferase 3", "gene_name": "B4GALT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15291-1", "protein_name": "Beta-1,4-galactosyltransferase 1", "gene_name": "B4GALT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFL0-1", "protein_name": "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7", "gene_name": "B3GNT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2A9-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3", "gene_name": "B3GNT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51888-1", "protein_name": "Prolargin", "gene_name": "PRELP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9C0J1-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4", "gene_name": "B3GNT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UQ53-1", "protein_name": "Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B", "gene_name": "MGAT4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBM8-1", "protein_name": "Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C", "gene_name": "MGAT4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM21-1", "protein_name": "Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A", "gene_name": "MGAT4A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P51884", "url": "https://www.uniprot.org/uniprotkb/P51884" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "snv": [ { "evidence": [ { "id": "rs1564035076", "database": "dbSNP", "url": "https://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?type=rs&rs=rs1564035076" }, { "id": "11901181", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/11901181" } ], "glycoeffect": [], "start_pos": 345, "end_pos": 345, "sequence_org": "R", "sequence_mut": "null", "comment": "Germline mutation passed 1 filters: glycogene of type=glycogene, glycosyltransferase.", "chr_id": "9", "chr_pos": "33113807", "ref_nt": "p", "alt_nt": "null", "minor_allelic_frequency": "", "site_lbl": "R345", "disease": [ { "disease_id": "DOID:0070256", "recommended_name": { "id": "DOID:0070256", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0070256", "name": "congenital disorder of glycosylation type IId", "description": "A congenital disorder of glycosylation type II that has_material_basis_in an autosomal recessive mutation of the B4GALT1 gene on chromosome 9p21.1." }, "synonyms": [ { "id": "DOID:0070256", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0070256", "name": "CDG IId", "description": "" }, { "id": "DOID:0070256", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0070256", "name": "CDG2D", "description": "" }, { "id": "DOID:0070256", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0070256", "name": "CDGIId", "description": "" }, { "id": "MONDO:0011772", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011772", "name": "B4GALT1-congenital disorder of glycosylation", "description": "B4GALT1-CDG is a congenital disorder of glycosylation characterized by macrocephaly due to Dandy-Walker malformation, hydrocephaly, hypotonia, myopathy and coagulation anomalies. To date, only one case has been reported. The syndrome is associated with mutations in the GALT1 gene (localized to region q13 of chromosome 9) leading to a deficiency in the Golgi apparatus enzyme beta-1,4-galactosyl transferase." }, { "id": "MONDO:0011772", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011772", "name": "B4GALT1-CDG", "description": "" }, { "id": "MONDO:0011772", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011772", "name": "B4GALT1-congenital disorder of glycosylation", "description": "" }, { "id": "MONDO:0011772", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011772", "name": "Beta-1,4-galactosyltransferase deficiency", "description": "" }, { "id": "MONDO:0011772", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011772", "name": "CDG syndrome type IId", "description": "" }, { "id": "MONDO:0011772", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011772", "name": "CDG-IId", "description": "" }, { "id": "MONDO:0011772", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011772", "name": "CDG2D", "description": "" }, { "id": "MONDO:0011772", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011772", "name": "carbohydrate deficient glycoprotein syndrome type IId", "description": "" }, { "id": "MONDO:0011772", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011772", "name": "congenital disorder of glycosylation type 2d", "description": "" }, { "id": "MONDO:0011772", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011772", "name": "congenital disorder of glycosylation type IId", "description": "" }, { "id": "MONDO:0011772", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011772", "name": "B4GALT1-CDG (CDG-IId)", "description": "" }, { "id": "MONDO:0011772", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011772", "name": "CDG 2D", "description": "" }, { "id": "MONDO:0011772", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011772", "name": "congenital disorder of glycosylation, type IId", "description": "" }, { "id": "MIM:607091", "resource": "MIM", "url": "https://www.omim.org/entry/607091", "name": "Congenital disorder of glycosylation 2D", "description": "Congenital disorder of glycosylation 2D" } ], "unlinked_id_list": [], "evidence": [ { "id": "0011772", "database": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011772" }, { "id": "607091", "database": "MIM", "url": "https://www.omim.org/entry/607091" }, { "id": "B4GALT1", "database": "Genomics England", "url": "https://panelapp.genomicsengland.co.uk/panels/25/gene/B4GALT1/#!details" }, { "id": "2683", "database": "GlyCosmos", "url": "https://glycosmos.org/glycogenes/show/2683#disease" }, { "id": "0070256", "database": "AGR", "url": 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[] } ] }, { "title": "Enzymatic synthesis in vitro of the disulfated disaccharide unit of corneal keratan sulfate.", "journal": "The Journal of biological chemistry", "date": "2002", "authors": "Akama TO, Misra AK, Hindsgaul O, Fukuda MN", "reference": { "type": "PubMed", "id": "12218059", "url": "https://pubmed.ncbi.nlm.nih.gov/12218059" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43916-1", "protein_name": "Carbohydrate sulfotransferase 1", "gene_name": "CHST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06828-1", "protein_name": "Fibromodulin", "gene_name": "FMOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4C5-1", "protein_name": "Carbohydrate sulfotransferase 2", "gene_name": "CHST2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZS9-1", "protein_name": "Carbohydrate sulfotransferase 5", "gene_name": "CHST5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX3-1", "protein_name": "Carbohydrate sulfotransferase 6", "gene_name": "CHST6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16112-1", "protein_name": "Aggrecan core protein", "gene_name": "ACAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99983-1", "protein_name": "Osteomodulin", "gene_name": "OMD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76EJ3-1", "protein_name": "Nucleotide sugar transporter SLC35D2", "gene_name": "SLC35D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11201-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1", "gene_name": "ST3GAL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11206-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4", "gene_name": "ST3GAL4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16842-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2", "gene_name": "ST3GAL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11203-1", "protein_name": "CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase", "gene_name": "ST3GAL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43505-1", "protein_name": "Beta-1,4-glucuronyltransferase 1", "gene_name": "B4GAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY97-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2", "gene_name": "B3GNT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60513-1", "protein_name": "Beta-1,4-galactosyltransferase 4", "gene_name": "B4GALT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43286-1", "protein_name": "Beta-1,4-galactosyltransferase 5", "gene_name": "B4GALT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LGC8-1", "protein_name": "Carbohydrate sulfotransferase 3", "gene_name": "CHST3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60938-1", "protein_name": "Keratocan", "gene_name": "KERA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y274-1", "protein_name": "Type 2 lactosamine alpha-2,3-sialyltransferase", "gene_name": "ST3GAL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20774-1", "protein_name": "Mimecan", "gene_name": "OGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60909-1", "protein_name": "Beta-1,4-galactosyltransferase 2", "gene_name": "B4GALT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBX8-1", "protein_name": "Beta-1,4-galactosyltransferase 6", "gene_name": "B4GALT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60512-1", "protein_name": "Beta-1,4-galactosyltransferase 3", "gene_name": "B4GALT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15291-1", "protein_name": "Beta-1,4-galactosyltransferase 1", "gene_name": "B4GALT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFL0-1", "protein_name": "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7", "gene_name": "B3GNT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2A9-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3", "gene_name": "B3GNT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51888-1", "protein_name": "Prolargin", "gene_name": "PRELP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9C0J1-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4", "gene_name": "B3GNT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9QUP4-1", "protein_name": "Carbohydrate sulfotransferase 5", "gene_name": "Chst5", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P51884", "url": "https://www.uniprot.org/uniprotkb/P51884" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12218059", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 30 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of tyrosine sulfation in extracellular leucine-rich repeat proteins using mass spectrometry.", "journal": "The Journal of biological chemistry", "date": "2004", "authors": "Onnerfjord P, Heathfield TF, Heinegard D", "reference": { "type": "PubMed", "id": "14551184", "url": "https://pubmed.ncbi.nlm.nih.gov/14551184" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13605-1", "protein_name": "Fibromodulin", "gene_name": "FMOD", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "Q05443-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "Q06828-1", "protein_name": "Fibromodulin", "gene_name": "FMOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99983-1", "protein_name": "Osteomodulin", "gene_name": "OMD", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P51884", "url": "https://www.uniprot.org/uniprotkb/P51884" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.14551184", 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"n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A cDNA clone for human glucosamine-6-sulphatase reveals differences between arylsulphatases and non-arylsulphatases.", "journal": "The Biochemical journal", "date": "1992", "authors": "Robertson DA, Freeman C, Morris CP, Hopwood JJ", "reference": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "Q99983-1", "protein_name": "Osteomodulin", "gene_name": "OMD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16278-1", "protein_name": "Beta-galactosidase", "gene_name": "GLB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60938-1", "protein_name": "Keratocan", "gene_name": "KERA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20774-1", "protein_name": "Mimecan", "gene_name": "OGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IW92-1", "protein_name": "Beta-galactosidase-1-like protein 2", "gene_name": "GLB1L2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCI6-1", "protein_name": "Beta-galactosidase-1-like protein 3", "gene_name": "GLB1L3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51888-1", "protein_name": "Prolargin", "gene_name": "PRELP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UWU2-1", "protein_name": "Beta-galactosidase-1-like protein", "gene_name": "GLB1L", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P51884", "url": "https://www.uniprot.org/uniprotkb/P51884" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 422, "start_aa": "Asn", "end_pos": 422, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn422", "evidence": [ { "id": "P15586", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P15586#ptm_processing" }, { "id": "19159218", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/19159218" }, { "id": "1463457", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/1463457" } ], "filter_code": 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"count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Screening for N-glycosylated proteins by liquid chromatography mass spectrometry.", "journal": "Proteomics", "date": "2004", "authors": "Bunkenborg J, Pilch BJ, Podtelejnikov AV, Wisniewski JR", "reference": { "type": "PubMed", "id": "14760718", "url": "https://pubmed.ncbi.nlm.nih.gov/14760718" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00734-1", 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}, { "uniprot_canonical_ac": "Q6W4X9-1", "protein_name": "Mucin-6", "gene_name": "MUC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51888-1", "protein_name": "Prolargin", "gene_name": "PRELP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZMB0-1", "protein_name": "Acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase", "gene_name": "B3GNT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9C0J1-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4", "gene_name": "B3GNT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P109-1", "protein_name": "Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4", "gene_name": "GCNT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q49A17-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase-like 6", "gene_name": "GALNTL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95395-1", "protein_name": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of a cDNA encoding a protein with limited similarity to beta1, 3-N-acetylglucosaminyltransferase.", "journal": "Molecular biology reports", "date": "2004", "authors": "Zheng H, Li Y, Ji C, Li J, Zhang J, Yin G, Xu J, Ye X, Wu M, Zou X, Gu S, Xie Y, Mao Y", "reference": { "type": "PubMed", "id": "15560372", "url": "https://pubmed.ncbi.nlm.nih.gov/15560372" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H195-1", "protein_name": "Mucin-3B", "gene_name": "MUC3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43916-1", "protein_name": "Carbohydrate sulfotransferase 1", "gene_name": "CHST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14435-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 3", "gene_name": "GALNT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06828-1", "protein_name": "Fibromodulin", "gene_name": "FMOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P9A2-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 18", "gene_name": "GALNT18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SR1-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 10", "gene_name": "GALNT10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IXK2-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 12", "gene_name": "GALNT12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N428-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 16", "gene_name": "GALNT16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4C5-1", "protein_name": "Carbohydrate sulfotransferase 2", "gene_name": "CHST2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCG5-1", "protein_name": "Carbohydrate sulfotransferase 4", "gene_name": "CHST4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZS9-1", "protein_name": "Carbohydrate sulfotransferase 5", "gene_name": "CHST5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX3-1", "protein_name": "Carbohydrate sulfotransferase 6", "gene_name": "CHST6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16112-1", "protein_name": "Aggrecan core protein", "gene_name": "ACAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99983-1", "protein_name": "Osteomodulin", "gene_name": "OMD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76EJ3-1", "protein_name": "Nucleotide sugar transporter SLC35D2", "gene_name": "SLC35D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11201-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1", "gene_name": "ST3GAL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11206-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4", "gene_name": "ST3GAL4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16842-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2", "gene_name": "ST3GAL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11203-1", "protein_name": "CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase", "gene_name": "ST3GAL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43505-1", "protein_name": "Beta-1,4-glucuronyltransferase 1", "gene_name": "B4GAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY97-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2", "gene_name": "B3GNT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60513-1", "protein_name": "Beta-1,4-galactosyltransferase 4", "gene_name": "B4GALT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43286-1", "protein_name": "Beta-1,4-galactosyltransferase 5", "gene_name": "B4GALT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LGC8-1", "protein_name": "Carbohydrate sulfotransferase 3", "gene_name": "CHST3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99102-1", "protein_name": "Mucin-4", "gene_name": "MUC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DR8-1", "protein_name": "Mucin-like protein 1", "gene_name": "MUCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P98088-1", "protein_name": "Mucin-5AC", "gene_name": "MUC5AC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC84-1", "protein_name": "Mucin-5B", "gene_name": "MUC5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60938-1", "protein_name": "Keratocan", "gene_name": "KERA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y274-1", "protein_name": "Type 2 lactosamine alpha-2,3-sialyltransferase", "gene_name": "ST3GAL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20774-1", "protein_name": "Mimecan", "gene_name": "OGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCL4-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 6", "gene_name": "GALNT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCQ5-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 9", "gene_name": "GALNT9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q10472-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 1", "gene_name": "GALNT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY28-1", "protein_name": "Probable polypeptide N-acetylgalactosaminyltransferase 8", "gene_name": "GALNT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IS24-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 17", "gene_name": "GALNT17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z7M9-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 5", "gene_name": "GALNT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q10471-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 2", "gene_name": "GALNT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4A0-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 4", "gene_name": "GALNT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02817-1", "protein_name": "Mucin-2", "gene_name": "MUC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TAX7-1", "protein_name": "Mucin-7", "gene_name": "MUC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCW6-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 11", "gene_name": "GALNT11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SF2-1", "protein_name": "N-acetylgalactosaminyltransferase 7", "gene_name": "GALNT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUC8-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 13", "gene_name": "GALNT13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FL9-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 14", "gene_name": "GALNT14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02742-1", "protein_name": "Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase", "gene_name": "GCNT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60909-1", "protein_name": "Beta-1,4-galactosyltransferase 2", "gene_name": "B4GALT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UX72-1", "protein_name": "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9", "gene_name": "B3GNT9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBX8-1", "protein_name": "Beta-1,4-galactosyltransferase 6", "gene_name": "B4GALT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q67FW5-1", "protein_name": "Queuosine-tRNA galactosyltransferase", "gene_name": "QTGAL", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60512-1", "protein_name": "Beta-1,4-galactosyltransferase 3", "gene_name": "B4GALT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15291-1", "protein_name": "Beta-1,4-galactosyltransferase 1", "gene_name": "B4GALT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z7M8-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 8", "gene_name": "B3GNT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFL0-1", "protein_name": "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7", "gene_name": "B3GNT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2A9-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3", "gene_name": "B3GNT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BYG0-1", "protein_name": "Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase", "gene_name": "B3GNT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NS00-1", "protein_name": "Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1", "gene_name": "C1GALT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EU7-1", "protein_name": "C1GALT1-specific chaperone 1", "gene_name": "C1GALT1C1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N387-1", "protein_name": "Mucin-15", "gene_name": "MUC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N307-1", "protein_name": "Mucin-20", "gene_name": "MUC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H3R2-1", "protein_name": "Mucin-13", "gene_name": "MUC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z5P9-1", "protein_name": "Mucin-19", "gene_name": "MUC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6W4X9-1", "protein_name": "Mucin-6", "gene_name": "MUC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51888-1", "protein_name": "Prolargin", "gene_name": "PRELP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZMB0-1", "protein_name": "Acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase", "gene_name": "B3GNT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9C0J1-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4", "gene_name": "B3GNT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P109-1", "protein_name": "Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4", "gene_name": "GCNT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q49A17-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase-like 6", "gene_name": "GALNTL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95395-1", "protein_name": "Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3", "gene_name": "GCNT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZNI0-1", "protein_name": "Probable beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 7", "gene_name": "GCNT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4T8-1", "protein_name": "Inactive polypeptide N-acetylgalactosaminyltransferase-like protein 5", "gene_name": "GALNTL5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N3T1-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 15", "gene_name": "GALNT15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI7-1", "protein_name": "Mucin-16", "gene_name": "MUC16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5SSG8-1", "protein_name": "Mucin-21", "gene_name": "MUC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q685J3-1", "protein_name": "Mucin-17", "gene_name": "MUC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02505-1", "protein_name": "Mucin-3A", "gene_name": "MUC3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKN1-1", "protein_name": "Mucin-12", "gene_name": "MUC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNA3-1", "protein_name": "Alpha-1,4-N-acetylglucosaminyltransferase", "gene_name": "A4GNT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15941-1", "protein_name": "Mucin-1", "gene_name": "MUC1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P51884", "url": "https://www.uniprot.org/uniprotkb/P51884" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15560372", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 80 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A novel beta1,3-N-acetylglucosaminyltransferase (beta3Gn-T8), which synthesizes poly-N-acetyllactosamine, is dramatically upregulated in colon cancer.", "journal": "FEBS letters", "date": "2005", "authors": "Ishida H, Togayachi A, Sakai T, Iwai T, Hiruma T, Sato T, Okubo R, Inaba N, Kudo T, Gotoh M, Shoda J, Tanaka N, Narimatsu H", "reference": { "type": "PubMed", "id": "15620693", "url": "https://pubmed.ncbi.nlm.nih.gov/15620693" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H195-1", "protein_name": "Mucin-3B", "gene_name": "MUC3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43916-1", "protein_name": "Carbohydrate sulfotransferase 1", "gene_name": "CHST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14435-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 3", "gene_name": "GALNT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06828-1", "protein_name": "Fibromodulin", "gene_name": "FMOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P9A2-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 18", "gene_name": "GALNT18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SR1-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 10", "gene_name": "GALNT10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IXK2-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 12", "gene_name": "GALNT12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N428-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 16", "gene_name": "GALNT16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4C5-1", "protein_name": "Carbohydrate sulfotransferase 2", "gene_name": "CHST2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCG5-1", "protein_name": "Carbohydrate sulfotransferase 4", "gene_name": "CHST4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZS9-1", "protein_name": "Carbohydrate sulfotransferase 5", "gene_name": "CHST5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX3-1", "protein_name": "Carbohydrate sulfotransferase 6", "gene_name": "CHST6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16112-1", "protein_name": "Aggrecan core protein", "gene_name": "ACAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99983-1", "protein_name": "Osteomodulin", "gene_name": "OMD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76EJ3-1", "protein_name": "Nucleotide sugar transporter SLC35D2", "gene_name": "SLC35D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11201-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1", "gene_name": "ST3GAL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11206-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4", "gene_name": "ST3GAL4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16842-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2", "gene_name": "ST3GAL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11203-1", "protein_name": "CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase", "gene_name": "ST3GAL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43505-1", "protein_name": "Beta-1,4-glucuronyltransferase 1", "gene_name": "B4GAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY97-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2", "gene_name": "B3GNT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60513-1", "protein_name": "Beta-1,4-galactosyltransferase 4", "gene_name": "B4GALT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43286-1", "protein_name": "Beta-1,4-galactosyltransferase 5", "gene_name": "B4GALT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LGC8-1", "protein_name": "Carbohydrate sulfotransferase 3", "gene_name": "CHST3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99102-1", "protein_name": "Mucin-4", "gene_name": "MUC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DR8-1", "protein_name": "Mucin-like protein 1", "gene_name": "MUCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P98088-1", "protein_name": "Mucin-5AC", "gene_name": "MUC5AC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC84-1", "protein_name": "Mucin-5B", "gene_name": "MUC5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60938-1", "protein_name": "Keratocan", "gene_name": "KERA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y274-1", "protein_name": "Type 2 lactosamine alpha-2,3-sialyltransferase", "gene_name": "ST3GAL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20774-1", "protein_name": "Mimecan", "gene_name": "OGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCL4-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 6", "gene_name": "GALNT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCQ5-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 9", "gene_name": "GALNT9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q10472-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 1", "gene_name": "GALNT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY28-1", "protein_name": "Probable polypeptide N-acetylgalactosaminyltransferase 8", "gene_name": "GALNT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IS24-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 17", "gene_name": "GALNT17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z7M9-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 5", "gene_name": "GALNT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q10471-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 2", "gene_name": "GALNT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4A0-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 4", "gene_name": "GALNT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02817-1", "protein_name": "Mucin-2", "gene_name": "MUC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TAX7-1", "protein_name": "Mucin-7", "gene_name": "MUC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCW6-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 11", "gene_name": "GALNT11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SF2-1", "protein_name": "N-acetylgalactosaminyltransferase 7", "gene_name": "GALNT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUC8-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 13", "gene_name": "GALNT13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FL9-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 14", "gene_name": "GALNT14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02742-1", "protein_name": "Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase", "gene_name": "GCNT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60909-1", "protein_name": "Beta-1,4-galactosyltransferase 2", "gene_name": "B4GALT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UX72-1", "protein_name": "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9", "gene_name": "B3GNT9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBX8-1", "protein_name": "Beta-1,4-galactosyltransferase 6", "gene_name": "B4GALT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q67FW5-1", "protein_name": "Queuosine-tRNA galactosyltransferase", "gene_name": "QTGAL", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60512-1", "protein_name": "Beta-1,4-galactosyltransferase 3", "gene_name": "B4GALT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15291-1", "protein_name": "Beta-1,4-galactosyltransferase 1", "gene_name": "B4GALT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z7M8-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 8", "gene_name": "B3GNT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFL0-1", "protein_name": "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7", "gene_name": "B3GNT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2A9-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3", "gene_name": "B3GNT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BYG0-1", "protein_name": "Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase", "gene_name": "B3GNT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NS00-1", "protein_name": "Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1", "gene_name": "C1GALT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EU7-1", "protein_name": "C1GALT1-specific chaperone 1", "gene_name": "C1GALT1C1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N387-1", "protein_name": "Mucin-15", "gene_name": "MUC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N307-1", "protein_name": "Mucin-20", "gene_name": "MUC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H3R2-1", "protein_name": "Mucin-13", "gene_name": "MUC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z5P9-1", "protein_name": "Mucin-19", "gene_name": "MUC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6W4X9-1", "protein_name": "Mucin-6", "gene_name": "MUC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51888-1", "protein_name": "Prolargin", "gene_name": "PRELP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZMB0-1", "protein_name": "Acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase", "gene_name": "B3GNT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9C0J1-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4", "gene_name": "B3GNT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P109-1", "protein_name": "Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4", "gene_name": "GCNT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q49A17-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase-like 6", "gene_name": "GALNTL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95395-1", "protein_name": "Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3", "gene_name": "GCNT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZNI0-1", "protein_name": "Probable beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 7", "gene_name": "GCNT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4T8-1", "protein_name": "Inactive polypeptide N-acetylgalactosaminyltransferase-like protein 5", "gene_name": "GALNTL5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N3T1-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 15", "gene_name": "GALNT15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI7-1", "protein_name": "Mucin-16", "gene_name": "MUC16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5SSG8-1", "protein_name": "Mucin-21", "gene_name": "MUC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q685J3-1", "protein_name": "Mucin-17", "gene_name": "MUC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02505-1", "protein_name": "Mucin-3A", "gene_name": "MUC3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKN1-1", "protein_name": "Mucin-12", "gene_name": "MUC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNA3-1", "protein_name": "Alpha-1,4-N-acetylglucosaminyltransferase", "gene_name": "A4GNT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15941-1", "protein_name": "Mucin-1", "gene_name": "MUC1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P51884", "url": "https://www.uniprot.org/uniprotkb/P51884" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15620693", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 80 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Transition of galactosyltransferase 1 from trans-Golgi cisterna to the trans-Golgi network is signal mediated.", "journal": "Molecular biology of the cell", "date": "2006", "authors": "Schaub BE, Berger B, Berger EG, Rohrer J", "reference": { "type": "PubMed", "id": "17021253", "url": "https://pubmed.ncbi.nlm.nih.gov/17021253" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43916-1", "protein_name": "Carbohydrate sulfotransferase 1", "gene_name": "CHST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06828-1", "protein_name": "Fibromodulin", "gene_name": "FMOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09328-1", "protein_name": "Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A", "gene_name": "MGAT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4C5-1", "protein_name": "Carbohydrate sulfotransferase 2", "gene_name": "CHST2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZS9-1", "protein_name": "Carbohydrate sulfotransferase 5", "gene_name": "CHST5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX3-1", "protein_name": "Carbohydrate sulfotransferase 6", "gene_name": "CHST6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16112-1", "protein_name": "Aggrecan core protein", "gene_name": "ACAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99983-1", "protein_name": "Osteomodulin", "gene_name": "OMD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76EJ3-1", "protein_name": "Nucleotide sugar transporter SLC35D2", "gene_name": "SLC35D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11201-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1", "gene_name": "ST3GAL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11206-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4", "gene_name": "ST3GAL4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16842-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2", "gene_name": "ST3GAL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15907-1", "protein_name": "Beta-galactoside alpha-2,6-sialyltransferase 1", "gene_name": "ST6GAL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92186-1", "protein_name": "Alpha-2,8-sialyltransferase 8B", "gene_name": "ST8SIA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11203-1", "protein_name": "CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase", "gene_name": "ST3GAL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43505-1", "protein_name": "Beta-1,4-glucuronyltransferase 1", "gene_name": "B4GAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY97-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2", "gene_name": "B3GNT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60513-1", "protein_name": "Beta-1,4-galactosyltransferase 4", "gene_name": "B4GALT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43286-1", "protein_name": "Beta-1,4-galactosyltransferase 5", "gene_name": "B4GALT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LGC8-1", "protein_name": "Carbohydrate sulfotransferase 3", "gene_name": "CHST3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60938-1", "protein_name": "Keratocan", "gene_name": "KERA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y274-1", "protein_name": "Type 2 lactosamine alpha-2,3-sialyltransferase", "gene_name": "ST3GAL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61647-1", "protein_name": "Alpha-2,8-sialyltransferase 8F", "gene_name": "ST8SIA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43173-1", "protein_name": "Alpha-N-acetylneuraminate alpha-2,8-sialyltransferase ST8SIA3", "gene_name": "ST8SIA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20774-1", "protein_name": "Mimecan", "gene_name": "OGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60909-1", "protein_name": "Beta-1,4-galactosyltransferase 2", "gene_name": "B4GALT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBX8-1", "protein_name": "Beta-1,4-galactosyltransferase 6", "gene_name": "B4GALT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60512-1", "protein_name": "Beta-1,4-galactosyltransferase 3", "gene_name": "B4GALT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15291-1", "protein_name": "Beta-1,4-galactosyltransferase 1", "gene_name": "B4GALT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFL0-1", "protein_name": "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7", "gene_name": "B3GNT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2A9-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3", "gene_name": "B3GNT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51888-1", "protein_name": "Prolargin", "gene_name": "PRELP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9C0J1-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4", "gene_name": "B3GNT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UQ53-1", "protein_name": "Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B", "gene_name": "MGAT4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBM8-1", "protein_name": "Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase 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"total_sites", "count": 11 }, { "field": "n_linked_sites", "count": 11 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 11 }, { "field": "exact_n_linked_sites", "count": 11 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl", "mining_tool", "filter_code", "uniprot_canonical_ac", "icn3d_view.label", "icn3d_view.url" ] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 11 }, { "field": "total_sites", "count": 11 }, { "field": "n_linked_sites", "count": 11 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 11 }, { "field": "exact_n_linked_sites", "count": 11 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl", "mining_tool", "filter_code", "uniprot_canonical_ac", "icn3d_view.label", "icn3d_view.url" ] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 11 }, { "field": "total_sites", "count": 11 }, { "field": "n_linked_sites", "count": 11 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 11 }, { "field": "exact_n_linked_sites", "count": 11 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl", "mining_tool", "filter_code", "uniprot_canonical_ac", "icn3d_view.label", "icn3d_view.url" ] } ] }, { "title": "Human glucosamine-6-sulfatase cDNA reveals homology with steroid sulfatase.", "journal": "Biochemical and biophysical research communications", "date": "1988", "authors": "Robertson DA, Freeman C, Nelson PV, Morris CP, Hopwood JJ", "reference": { "type": "PubMed", "id": "3196333", "url": "https://pubmed.ncbi.nlm.nih.gov/3196333" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34059-1", "protein_name": "N-acetylgalactosamine-6-sulfatase", "gene_name": "GALNS", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06828-1", "protein_name": "Fibromodulin", "gene_name": "FMOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15586-1", "protein_name": "N-acetylglucosamine-6-sulfatase", "gene_name": "GNS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06865-1", "protein_name": "Beta-hexosaminidase subunit alpha", "gene_name": "HEXA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07686-1", "protein_name": "Beta-hexosaminidase subunit beta", "gene_name": "HEXB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16112-1", "protein_name": "Aggrecan core protein", "gene_name": "ACAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99983-1", "protein_name": "Osteomodulin", "gene_name": "OMD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16278-1", "protein_name": "Beta-galactosidase", "gene_name": "GLB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60938-1", "protein_name": "Keratocan", "gene_name": "KERA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20774-1", "protein_name": "Mimecan", "gene_name": "OGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IW92-1", "protein_name": "Beta-galactosidase-1-like protein 2", "gene_name": "GLB1L2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCI6-1", "protein_name": "Beta-galactosidase-1-like protein 3", "gene_name": "GLB1L3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51888-1", "protein_name": "Prolargin", "gene_name": "PRELP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UWU2-1", "protein_name": "Beta-galactosidase-1-like protein", "gene_name": "GLB1L", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P51884", "url": "https://www.uniprot.org/uniprotkb/P51884" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.3196333", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 15 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Lumican silencing alleviates tumor necrosis factor-alpha-induced nucleus pulposus cell inflammation and senescence by inhibiting apoptosis signal regulating kinase 1/p38 signaling pathway via inactivating Fas ligand expression.", "journal": "Bioengineered", "date": "2021", "authors": "Li Z, Sun C, Chen M, Wang B", "reference": { "type": "PubMed", "id": "34516336", "url": "https://pubmed.ncbi.nlm.nih.gov/34516336" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P51884", "url": "https://www.uniprot.org/uniprotkb/P51884" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.34516336", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Community evaluation of glycoproteomics informatics solutions reveals high-performance search strategies for serum glycopeptide analysis.", "journal": "Nature methods", "date": "2021", "authors": "Kawahara R, Chernykh A, Alagesan K, Bern M, Cao W, Chalkley RJ, Cheng K, Choo MS, Edwards N, Goldman R, Hoffmann M, Hu Y, Huang Y, Kim JY, Kletter D, Liquet B, Liu M, Mechref Y, Meng B, Neelamegham S, Nguyen-Khuong T, Nilsson J, Pap A, Park GW, Parker BL, Pegg CL, Penninger JM, Phung TK, Pioch M, Rapp E, Sakalli E, Sanda M, Schulz BL, Scott NE, Sofronov G, Stadlmann J, Vakhrushev SY, Woo CM, Wu HY, Yang P, Ying W, Zhang H, Zhang Y, Zhao J, Zaia J, Haslam SM, Palmisano G, Yoo JS, Larson G, Khoo KH, Medzihradszky KF, Kolarich D, Packer NH, Thaysen-Andersen M", "reference": { "type": "PubMed", "id": "34725484", "url": "https://pubmed.ncbi.nlm.nih.gov/34725484" }, "referenced_glycans": [ { "glytoucan_ac": "G79568CQ" }, { "glytoucan_ac": "G52527GH" }, { "glytoucan_ac": "G82463GQ" }, { "glytoucan_ac": "G26403SG" }, { "glytoucan_ac": "G72291OX" }, { "glytoucan_ac": "G72735IY" }, { "glytoucan_ac": "G66088HZ" }, { "glytoucan_ac": "G66538GV" }, { "glytoucan_ac": "G11629QQ" }, { "glytoucan_ac": "G12793SR" }, { "glytoucan_ac": "G74722FL" }, { "glytoucan_ac": "G66760KM" }, { "glytoucan_ac": "G60145BJ" }, { "glytoucan_ac": "G91473PK" }, { "glytoucan_ac": "G91636VS" }, { "glytoucan_ac": "G81006GJ" }, { "glytoucan_ac": "G81295CK" }, { "glytoucan_ac": "G06110VR" }, { "glytoucan_ac": "G06356OH" }, { "glytoucan_ac": "G84452RH" }, { "glytoucan_ac": "G22310AV" }, { "glytoucan_ac": "G15169WU" }, { "glytoucan_ac": "G33609NS" }, { "glytoucan_ac": "G02030ZB" }, { "glytoucan_ac": "G93656SY" }, { "glytoucan_ac": "G50045TK" }, { "glytoucan_ac": "G46687AB" }, { "glytoucan_ac": "G47518TP" }, { "glytoucan_ac": "G47681UP" }, { "glytoucan_ac": "G03382KH" }, { "glytoucan_ac": "G48414YA" }, { "glytoucan_ac": "G49874UX" }, { "glytoucan_ac": "G29931IJ" }, { "glytoucan_ac": "G46524LG" }, { "glytoucan_ac": "G39188ZX" }, { "glytoucan_ac": "G23294PN" }, { "glytoucan_ac": "G23432EQ" }, { "glytoucan_ac": "G23863VK" }, { "glytoucan_ac": "G75983OB" }, { "glytoucan_ac": "G31916IQ" }, { "glytoucan_ac": "G31936TA" }, { "glytoucan_ac": "G69834CE" } ], "referenced_proteins": [ { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00734-1", "protein_name": "Prothrombin", "gene_name": "F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43652-1", "protein_name": "Afamin", "gene_name": "AFM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01008-1", "protein_name": "Antithrombin-III", "gene_name": "SERPINC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02765-1", "protein_name": "Alpha-2-HS-glycoprotein", "gene_name": "AHSG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PD5-1", "protein_name": "N-acetylmuramoyl-L-alanine amidase", "gene_name": "PGLYRP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04278-1", "protein_name": "Sex hormone-binding globulin", "gene_name": "SHBG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05156-1", "protein_name": "Complement factor I", "gene_name": "CFI", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75882-1", "protein_name": "Attractin", "gene_name": "ATRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08185-1", "protein_name": "Corticosteroid-binding globulin", "gene_name": "SERPINA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00450-1", "protein_name": "Ceruloplasmin", "gene_name": "CP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C0L5-1", "protein_name": "Complement C4-B", "gene_name": "C4B_2; C4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C0L4-1", "protein_name": "Complement C4-A", "gene_name": "C4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P03952-1", "protein_name": "Plasma kallikrein", "gene_name": "KLKB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05155-1", "protein_name": "Plasma protease C1 inhibitor", "gene_name": "SERPING1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01861-2", "protein_name": "Immunoglobulin heavy constant gamma 4", "gene_name": "IGHG4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01876-2", "protein_name": "Immunoglobulin heavy constant alpha 1", "gene_name": "IGHA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02749-1", "protein_name": "Beta-2-glycoprotein 1", "gene_name": "APOH", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00738-1", "protein_name": "Haptoglobin", "gene_name": "HP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04070-1", 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Gao L, Zeng Z, Cheng M, Jin X, Chen J, Wen F, Wang T", "reference": { "type": "PubMed", "id": "36059026", "url": "https://pubmed.ncbi.nlm.nih.gov/36059026" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P51884", "url": "https://www.uniprot.org/uniprotkb/P51884" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.36059026", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 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"n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Exploiting Substrate Specificities of 6-O-Sulfotransferases to Enzymatically Synthesize Keratan Sulfate Oligosaccharides.", "journal": "JACS Au", "date": "2023-11-27", "authors": "Wu Yunfei, Vos Ga\u00ebl M, Huang Chin, Chapla Digantkumar, Kimpel Anne L M, Moremen Kelley W, de Vries Robert P, Boons Geert-Jan", "reference": { "type": "PubMed", "id": "38034954", "url": "https://pubmed.ncbi.nlm.nih.gov/38034954" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43916-1", "protein_name": "Carbohydrate sulfotransferase 1", "gene_name": "CHST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06828-1", "protein_name": "Fibromodulin", "gene_name": "FMOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4C5-1", "protein_name": "Carbohydrate sulfotransferase 2", "gene_name": "CHST2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZS9-1", "protein_name": "Carbohydrate sulfotransferase 5", "gene_name": "CHST5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX3-1", "protein_name": "Carbohydrate sulfotransferase 6", "gene_name": "CHST6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16112-1", "protein_name": "Aggrecan core protein", "gene_name": "ACAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99983-1", "protein_name": "Osteomodulin", "gene_name": "OMD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76EJ3-1", "protein_name": "Nucleotide sugar transporter SLC35D2", "gene_name": "SLC35D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11201-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1", "gene_name": "ST3GAL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11206-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4", "gene_name": "ST3GAL4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16842-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2", "gene_name": "ST3GAL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11203-1", "protein_name": "CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase", "gene_name": "ST3GAL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43505-1", "protein_name": "Beta-1,4-glucuronyltransferase 1", "gene_name": "B4GAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY97-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2", "gene_name": "B3GNT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60513-1", "protein_name": "Beta-1,4-galactosyltransferase 4", "gene_name": "B4GALT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43286-1", "protein_name": "Beta-1,4-galactosyltransferase 5", "gene_name": "B4GALT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LGC8-1", "protein_name": "Carbohydrate sulfotransferase 3", "gene_name": "CHST3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60938-1", "protein_name": "Keratocan", "gene_name": "KERA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y274-1", "protein_name": "Type 2 lactosamine alpha-2,3-sialyltransferase", "gene_name": "ST3GAL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20774-1", "protein_name": "Mimecan", "gene_name": "OGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60909-1", "protein_name": "Beta-1,4-galactosyltransferase 2", "gene_name": "B4GALT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBX8-1", "protein_name": "Beta-1,4-galactosyltransferase 6", "gene_name": "B4GALT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60512-1", "protein_name": "Beta-1,4-galactosyltransferase 3", "gene_name": "B4GALT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15291-1", "protein_name": "Beta-1,4-galactosyltransferase 1", "gene_name": "B4GALT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFL0-1", "protein_name": "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7", "gene_name": "B3GNT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2A9-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3", "gene_name": "B3GNT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51888-1", "protein_name": "Prolargin", "gene_name": "PRELP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9C0J1-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4", "gene_name": "B3GNT4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P51884", "url": "https://www.uniprot.org/uniprotkb/P51884" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.38034954", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 29 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { 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"common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.38129820", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Purification and properties of human N-acetylgalactosamine-6-sulfate sulfatase.", "journal": "Biochimica et biophysica acta", "date": "1981", "authors": "Lim CT, Horwitz AL", "reference": { "type": "PubMed", "id": "7213753", "url": "https://pubmed.ncbi.nlm.nih.gov/7213753" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34059-1", "protein_name": "N-acetylgalactosamine-6-sulfatase", "gene_name": "GALNS", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06828-1", "protein_name": "Fibromodulin", "gene_name": "FMOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15586-1", "protein_name": "N-acetylglucosamine-6-sulfatase", "gene_name": "GNS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06865-1", "protein_name": "Beta-hexosaminidase subunit alpha", "gene_name": "HEXA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07686-1", "protein_name": "Beta-hexosaminidase subunit beta", "gene_name": "HEXB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16112-1", "protein_name": "Aggrecan core protein", "gene_name": "ACAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99983-1", "protein_name": "Osteomodulin", "gene_name": "OMD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16278-1", "protein_name": "Beta-galactosidase", "gene_name": "GLB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60938-1", "protein_name": "Keratocan", "gene_name": "KERA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20774-1", "protein_name": "Mimecan", "gene_name": "OGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IW92-1", "protein_name": "Beta-galactosidase-1-like protein 2", "gene_name": "GLB1L2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCI6-1", "protein_name": "Beta-galactosidase-1-like protein 3", "gene_name": "GLB1L3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51888-1", "protein_name": "Prolargin", "gene_name": "PRELP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UWU2-1", "protein_name": "Beta-galactosidase-1-like protein", "gene_name": "GLB1L", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P51884", "url": "https://www.uniprot.org/uniprotkb/P51884" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7213753", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 15 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Primary structure of human lumican (keratan sulfate proteoglycan) and localization of the gene (LUM) to chromosome 12q21.3-q22.", "journal": "Genomics", "date": "1995", "authors": "Chakravarti S, Stallings RL, SundarRaj N, Cornuet PK, Hassell JR", "reference": { "type": "PubMed", "id": "7558030", "url": "https://pubmed.ncbi.nlm.nih.gov/7558030" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P51884", "url": "https://www.uniprot.org/uniprotkb/P51884" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7558030", "abstract": "", "glycosylation": [], "mutagenesis": 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Organization, chromosomal location, and expression in articular cartilage.", "journal": "J. Biol. Chem.", "date": "1995", "authors": "Grover J, Chen X N, Korenberg J R, Roughley P J", "reference": { "type": "PubMed", "id": "7665616", "url": "https://pubmed.ncbi.nlm.nih.gov/7665616" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P51884", "url": "https://www.uniprot.org/uniprotkb/P51884" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7665616", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { 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"protein_name": "Alpha-N-acetylneuraminate alpha-2,8-sialyltransferase ST8SIA3", "gene_name": "ST8SIA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR45-1", "protein_name": "N-acetylneuraminate-9-phosphate synthase", "gene_name": "NANS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20774-1", "protein_name": "Mimecan", "gene_name": "OGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99519-1", "protein_name": "Sialidase-1", "gene_name": "NEU1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWR8-1", "protein_name": "Sialidase-4", "gene_name": "NEU4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02817-1", "protein_name": "Mucin-2", "gene_name": "MUC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TAX7-1", "protein_name": "Mucin-7", "gene_name": "MUC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51993-1", "protein_name": "4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase FUT6", "gene_name": "FUT6", "tax_name": "Human" }, { 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"protein_name": "Mucin-6", "gene_name": "MUC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51888-1", "protein_name": "Prolargin", "gene_name": "PRELP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFW8-1", "protein_name": "N-acylneuraminate cytidylyltransferase", "gene_name": "CMAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9C0J1-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4", "gene_name": "B3GNT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21217-1", "protein_name": "3-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferase FUT3", "gene_name": "FUT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22083-1", "protein_name": "Alpha-(1,3)-fucosyltransferase 4", "gene_name": "FUT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11130-1", "protein_name": "Alpha-(1,3)-fucosyltransferase 7", "gene_name": "FUT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y231-1", "protein_name": "4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9", "gene_name": "FUT9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI7-1", "protein_name": "Mucin-16", "gene_name": "MUC16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5SSG8-1", "protein_name": "Mucin-21", "gene_name": "MUC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q685J3-1", "protein_name": "Mucin-17", "gene_name": "MUC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02505-1", "protein_name": "Mucin-3A", "gene_name": "MUC3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKN1-1", "protein_name": "Mucin-12", "gene_name": "MUC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15941-1", "protein_name": "Mucin-1", "gene_name": "MUC1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P51884", "url": "https://www.uniprot.org/uniprotkb/P51884" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8333853", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 87 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of two glycolipid: alpha 2-3sialyltransferases, SAT-3 (CMP-NeuAc:nLcOse4Cer alpha 2-3sialyltransferase) and SAT-4 (CMP-NeuAc:GgOse4Cer alpha 2-3sialyltransferase), from human colon carcinoma (Colo 205) cell line.", "journal": "Biochemistry", "date": "1996", "authors": "Basu SS, Basu M, Li Z, Basu S", "reference": { "type": "PubMed", "id": "8611500", "url": "https://pubmed.ncbi.nlm.nih.gov/8611500" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78382-1", "protein_name": "CMP-sialic acid transporter", "gene_name": "SLC35A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15466-1", "protein_name": "Alpha-2,8-sialyltransferase 8E", "gene_name": "ST8SIA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXD5-1", "protein_name": "N-acetylneuraminate lyase", "gene_name": "NPL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H195-1", "protein_name": "Mucin-3B", "gene_name": "MUC3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43916-1", "protein_name": "Carbohydrate sulfotransferase 1", "gene_name": "CHST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06828-1", "protein_name": "Fibromodulin", "gene_name": "FMOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4C5-1", "protein_name": "Carbohydrate sulfotransferase 2", "gene_name": "CHST2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRA2-1", "protein_name": "Sialin", "gene_name": "SLC17A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZS9-1", "protein_name": "Carbohydrate sulfotransferase 5", "gene_name": "CHST5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX3-1", "protein_name": "Carbohydrate sulfotransferase 6", "gene_name": "CHST6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16112-1", "protein_name": "Aggrecan core protein", "gene_name": "ACAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE9-1", "protein_name": "N-acylneuraminate-9-phosphatase", "gene_name": "NANP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UQ49-1", "protein_name": "Sialidase-3", "gene_name": "NEU3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3R4-1", "protein_name": "Sialidase-2", "gene_name": "NEU2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99983-1", "protein_name": "Osteomodulin", "gene_name": "OMD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10619-1", "protein_name": "Lysosomal protective protein", "gene_name": "CTSA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76EJ3-1", "protein_name": "Nucleotide sugar transporter SLC35D2", "gene_name": "SLC35D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11201-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1", "gene_name": "ST3GAL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NSC7-1", "protein_name": "Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1", "gene_name": "ST6GALNAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11206-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4", "gene_name": "ST3GAL4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NDV1-1", "protein_name": "Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3", "gene_name": "ST6GALNAC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16842-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2", "gene_name": "ST3GAL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ37-1", "protein_name": "Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2", "gene_name": "ST6GALNAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15907-1", "protein_name": "Beta-galactoside alpha-2,6-sialyltransferase 1", "gene_name": "ST6GAL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNP4-1", "protein_name": "Lactosylceramide alpha-2,3-sialyltransferase", "gene_name": "ST3GAL5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92185-1", "protein_name": "Alpha-N-acetylneuraminide alpha-2,8-sialyltransferase", "gene_name": "ST8SIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92186-1", "protein_name": "Alpha-2,8-sialyltransferase 8B", "gene_name": "ST8SIA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVH7-1", "protein_name": "Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5", "gene_name": "ST6GALNAC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11203-1", "protein_name": "CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase", "gene_name": "ST3GAL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q969X2-1", "protein_name": "Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6", "gene_name": "ST6GALNAC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JF0-1", "protein_name": "Beta-galactoside alpha-2,6-sialyltransferase 2", "gene_name": "ST6GAL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4F1-1", "protein_name": "Alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase", "gene_name": "ST6GALNAC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43505-1", "protein_name": "Beta-1,4-glucuronyltransferase 1", "gene_name": "B4GAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16278-1", "protein_name": "Beta-galactosidase", "gene_name": "GLB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY97-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2", "gene_name": "B3GNT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60513-1", "protein_name": "Beta-1,4-galactosyltransferase 4", "gene_name": "B4GALT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43286-1", "protein_name": "Beta-1,4-galactosyltransferase 5", "gene_name": "B4GALT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LGC8-1", "protein_name": "Carbohydrate sulfotransferase 3", "gene_name": "CHST3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99102-1", "protein_name": "Mucin-4", "gene_name": "MUC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DR8-1", "protein_name": "Mucin-like protein 1", "gene_name": "MUCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P98088-1", "protein_name": "Mucin-5AC", "gene_name": "MUC5AC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC84-1", "protein_name": "Mucin-5B", "gene_name": "MUC5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60938-1", "protein_name": "Keratocan", "gene_name": "KERA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y274-1", "protein_name": "Type 2 lactosamine alpha-2,3-sialyltransferase", "gene_name": "ST3GAL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61647-1", "protein_name": "Alpha-2,8-sialyltransferase 8F", "gene_name": "ST8SIA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92187-1", "protein_name": "CMP-N-acetylneuraminate-poly-alpha-2,8-sialyltransferase", "gene_name": "ST8SIA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43173-1", "protein_name": "Alpha-N-acetylneuraminate alpha-2,8-sialyltransferase ST8SIA3", "gene_name": "ST8SIA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR45-1", "protein_name": "N-acetylneuraminate-9-phosphate synthase", "gene_name": "NANS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20774-1", "protein_name": "Mimecan", "gene_name": "OGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99519-1", "protein_name": "Sialidase-1", "gene_name": "NEU1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWR8-1", "protein_name": "Sialidase-4", "gene_name": "NEU4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02817-1", "protein_name": "Mucin-2", "gene_name": "MUC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TAX7-1", "protein_name": "Mucin-7", "gene_name": "MUC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60909-1", "protein_name": "Beta-1,4-galactosyltransferase 2", "gene_name": "B4GALT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y223-1", "protein_name": "Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase", "gene_name": "GNE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBX8-1", "protein_name": "Beta-1,4-galactosyltransferase 6", "gene_name": "B4GALT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60512-1", "protein_name": "Beta-1,4-galactosyltransferase 3", "gene_name": "B4GALT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15291-1", "protein_name": "Beta-1,4-galactosyltransferase 1", "gene_name": "B4GALT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFL0-1", "protein_name": "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7", "gene_name": "B3GNT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2A9-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3", "gene_name": "B3GNT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N387-1", "protein_name": "Mucin-15", "gene_name": "MUC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N307-1", "protein_name": "Mucin-20", "gene_name": "MUC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H3R2-1", "protein_name": "Mucin-13", "gene_name": "MUC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z5P9-1", "protein_name": "Mucin-19", "gene_name": "MUC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6W4X9-1", "protein_name": "Mucin-6", "gene_name": "MUC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51888-1", "protein_name": "Prolargin", "gene_name": "PRELP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFW8-1", "protein_name": "N-acylneuraminate cytidylyltransferase", "gene_name": "CMAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9C0J1-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4", "gene_name": "B3GNT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI7-1", "protein_name": "Mucin-16", "gene_name": "MUC16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5SSG8-1", "protein_name": "Mucin-21", "gene_name": "MUC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q685J3-1", "protein_name": "Mucin-17", "gene_name": "MUC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02505-1", "protein_name": "Mucin-3A", "gene_name": "MUC3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKN1-1", "protein_name": "Mucin-12", "gene_name": "MUC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15941-1", "protein_name": "Mucin-1", "gene_name": "MUC1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P51884", "url": "https://www.uniprot.org/uniprotkb/P51884" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8611500", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 75 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular cloning and expression of human Gal beta 1,3GalNAc alpha 2,3-sialytransferase (hST3Gal II).", "journal": "Biochemical and biophysical research communications", "date": "1996", "authors": "Kim YJ, Kim KS, Kim SH, Kim CH, Ko JH, Choe IS, Tsuji S, Lee YC", "reference": { "type": "PubMed", "id": "8920913", "url": "https://pubmed.ncbi.nlm.nih.gov/8920913" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78382-1", "protein_name": "CMP-sialic acid transporter", "gene_name": "SLC35A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15466-1", "protein_name": "Alpha-2,8-sialyltransferase 8E", "gene_name": "ST8SIA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXD5-1", "protein_name": "N-acetylneuraminate lyase", "gene_name": "NPL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H195-1", "protein_name": "Mucin-3B", "gene_name": "MUC3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43916-1", "protein_name": "Carbohydrate sulfotransferase 1", "gene_name": "CHST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06828-1", "protein_name": "Fibromodulin", "gene_name": "FMOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4C5-1", "protein_name": "Carbohydrate sulfotransferase 2", "gene_name": "CHST2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRA2-1", "protein_name": "Sialin", "gene_name": "SLC17A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZS9-1", "protein_name": "Carbohydrate sulfotransferase 5", "gene_name": "CHST5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX3-1", "protein_name": "Carbohydrate sulfotransferase 6", "gene_name": "CHST6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16112-1", "protein_name": "Aggrecan core protein", "gene_name": "ACAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE9-1", "protein_name": "N-acylneuraminate-9-phosphatase", "gene_name": "NANP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UQ49-1", "protein_name": "Sialidase-3", "gene_name": "NEU3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3R4-1", "protein_name": "Sialidase-2", "gene_name": "NEU2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99983-1", "protein_name": "Osteomodulin", "gene_name": "OMD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10619-1", "protein_name": "Lysosomal protective protein", "gene_name": "CTSA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76EJ3-1", "protein_name": "Nucleotide sugar transporter SLC35D2", "gene_name": "SLC35D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11201-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1", "gene_name": "ST3GAL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NSC7-1", "protein_name": "Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1", "gene_name": "ST6GALNAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11206-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4", "gene_name": "ST3GAL4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NDV1-1", "protein_name": "Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3", "gene_name": "ST6GALNAC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16842-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2", "gene_name": "ST3GAL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ37-1", "protein_name": "Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2", "gene_name": "ST6GALNAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15907-1", "protein_name": "Beta-galactoside alpha-2,6-sialyltransferase 1", "gene_name": "ST6GAL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNP4-1", "protein_name": "Lactosylceramide alpha-2,3-sialyltransferase", "gene_name": "ST3GAL5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92185-1", "protein_name": "Alpha-N-acetylneuraminide alpha-2,8-sialyltransferase", "gene_name": "ST8SIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92186-1", "protein_name": "Alpha-2,8-sialyltransferase 8B", "gene_name": "ST8SIA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75752-1", "protein_name": "UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1", "gene_name": "B3GALNT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVH7-1", "protein_name": "Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5", "gene_name": "ST6GALNAC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11203-1", "protein_name": "CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase", "gene_name": "ST3GAL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q969X2-1", "protein_name": "Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6", "gene_name": "ST6GALNAC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JF0-1", "protein_name": "Beta-galactoside alpha-2,6-sialyltransferase 2", "gene_name": "ST6GAL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4F1-1", "protein_name": "Alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase", "gene_name": "ST6GALNAC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43505-1", "protein_name": "Beta-1,4-glucuronyltransferase 1", "gene_name": "B4GAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16278-1", "protein_name": "Beta-galactosidase", "gene_name": "GLB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY97-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2", "gene_name": "B3GNT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60513-1", "protein_name": "Beta-1,4-galactosyltransferase 4", "gene_name": "B4GALT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43286-1", "protein_name": "Beta-1,4-galactosyltransferase 5", "gene_name": "B4GALT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16880-1", "protein_name": "2-hydroxyacylsphingosine 1-beta-galactosyltransferase", "gene_name": "UGT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16739-1", "protein_name": "Ceramide glucosyltransferase", "gene_name": "UGCG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LGC8-1", "protein_name": "Carbohydrate sulfotransferase 3", "gene_name": "CHST3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCT0-1", "protein_name": "Ceramide kinase", "gene_name": "CERK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99102-1", "protein_name": "Mucin-4", "gene_name": "MUC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DR8-1", "protein_name": "Mucin-like protein 1", "gene_name": "MUCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P98088-1", "protein_name": "Mucin-5AC", "gene_name": "MUC5AC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC84-1", "protein_name": "Mucin-5B", "gene_name": "MUC5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60938-1", "protein_name": "Keratocan", "gene_name": "KERA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y274-1", "protein_name": "Type 2 lactosamine alpha-2,3-sialyltransferase", "gene_name": "ST3GAL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61647-1", "protein_name": "Alpha-2,8-sialyltransferase 8F", "gene_name": "ST8SIA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92187-1", "protein_name": "CMP-N-acetylneuraminate-poly-alpha-2,8-sialyltransferase", "gene_name": "ST8SIA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43173-1", "protein_name": "Alpha-N-acetylneuraminate alpha-2,8-sialyltransferase ST8SIA3", "gene_name": "ST8SIA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR45-1", "protein_name": "N-acetylneuraminate-9-phosphate synthase", "gene_name": "NANS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20774-1", "protein_name": "Mimecan", "gene_name": "OGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99519-1", "protein_name": "Sialidase-1", "gene_name": "NEU1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWR8-1", "protein_name": "Sialidase-4", "gene_name": "NEU4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02817-1", "protein_name": "Mucin-2", "gene_name": "MUC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TAX7-1", "protein_name": "Mucin-7", "gene_name": "MUC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99999-1", "protein_name": "Galactosylceramide sulfotransferase", "gene_name": "GAL3ST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19526-1", "protein_name": "Galactoside alpha-(1,2)-fucosyltransferase 1", "gene_name": "FUT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q10981-1", "protein_name": "Galactoside alpha-(1,2)-fucosyltransferase 2", "gene_name": "FUT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60909-1", "protein_name": "Beta-1,4-galactosyltransferase 2", "gene_name": "B4GALT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96024-1", "protein_name": "Beta-1,3-galactosyltransferase 4", "gene_name": "B3GALT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y223-1", "protein_name": "Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase", "gene_name": "GNE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBX8-1", "protein_name": "Beta-1,4-galactosyltransferase 6", "gene_name": "B4GALT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60512-1", "protein_name": "Beta-1,4-galactosyltransferase 3", "gene_name": "B4GALT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15291-1", "protein_name": "Beta-1,4-galactosyltransferase 1", "gene_name": "B4GALT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFL0-1", "protein_name": "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7", "gene_name": "B3GNT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2A9-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3", "gene_name": "B3GNT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BYG0-1", "protein_name": "Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase", "gene_name": "B3GNT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N387-1", "protein_name": "Mucin-15", "gene_name": "MUC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N307-1", "protein_name": "Mucin-20", "gene_name": "MUC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H3R2-1", "protein_name": "Mucin-13", "gene_name": "MUC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z5P9-1", "protein_name": "Mucin-19", "gene_name": "MUC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6W4X9-1", "protein_name": "Mucin-6", "gene_name": "MUC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51888-1", "protein_name": "Prolargin", "gene_name": "PRELP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFW8-1", "protein_name": "N-acylneuraminate cytidylyltransferase", "gene_name": "CMAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00973-1", "protein_name": "Beta-1,4 N-acetylgalactosaminyltransferase 1", "gene_name": "B4GALNT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9C0J1-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4", "gene_name": "B3GNT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI7-1", "protein_name": "Mucin-16", "gene_name": "MUC16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5SSG8-1", "protein_name": "Mucin-21", "gene_name": "MUC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q685J3-1", "protein_name": "Mucin-17", "gene_name": "MUC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02505-1", "protein_name": "Mucin-3A", "gene_name": "MUC3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKN1-1", "protein_name": "Mucin-12", "gene_name": "MUC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPC4-1", "protein_name": "Lactosylceramide 4-alpha-galactosyltransferase", "gene_name": "A4GALT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15941-1", "protein_name": "Mucin-1", "gene_name": "MUC1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P51884", "url": "https://www.uniprot.org/uniprotkb/P51884" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8920913", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 86 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular cloning and characterization of human keratan sulfate Gal-6-sulfotransferase.", "journal": "The Journal of biological chemistry", "date": "1997", "authors": "Fukuta M, Inazawa J, Torii T, Tsuzuki K, Shimada E, Habuchi O", "reference": { "type": "PubMed", "id": "9405439", "url": "https://pubmed.ncbi.nlm.nih.gov/9405439" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43916-1", "protein_name": "Carbohydrate sulfotransferase 1", "gene_name": "CHST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06828-1", "protein_name": "Fibromodulin", "gene_name": "FMOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4C5-1", "protein_name": "Carbohydrate sulfotransferase 2", "gene_name": "CHST2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZS9-1", "protein_name": "Carbohydrate sulfotransferase 5", "gene_name": "CHST5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX3-1", "protein_name": "Carbohydrate sulfotransferase 6", "gene_name": "CHST6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16112-1", "protein_name": "Aggrecan core protein", "gene_name": "ACAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99983-1", "protein_name": "Osteomodulin", "gene_name": "OMD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76EJ3-1", "protein_name": "Nucleotide sugar transporter SLC35D2", "gene_name": "SLC35D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11201-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1", "gene_name": "ST3GAL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11206-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4", "gene_name": "ST3GAL4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16842-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2", "gene_name": "ST3GAL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11203-1", "protein_name": "CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase", "gene_name": "ST3GAL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43505-1", "protein_name": "Beta-1,4-glucuronyltransferase 1", "gene_name": "B4GAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY97-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2", "gene_name": "B3GNT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60513-1", "protein_name": "Beta-1,4-galactosyltransferase 4", "gene_name": "B4GALT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43286-1", "protein_name": "Beta-1,4-galactosyltransferase 5", "gene_name": "B4GALT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LGC8-1", "protein_name": "Carbohydrate sulfotransferase 3", "gene_name": "CHST3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60938-1", "protein_name": "Keratocan", "gene_name": "KERA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y274-1", "protein_name": "Type 2 lactosamine alpha-2,3-sialyltransferase", "gene_name": "ST3GAL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20774-1", "protein_name": "Mimecan", "gene_name": "OGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60909-1", "protein_name": "Beta-1,4-galactosyltransferase 2", "gene_name": "B4GALT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBX8-1", "protein_name": "Beta-1,4-galactosyltransferase 6", "gene_name": "B4GALT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60512-1", "protein_name": "Beta-1,4-galactosyltransferase 3", "gene_name": "B4GALT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15291-1", "protein_name": "Beta-1,4-galactosyltransferase 1", "gene_name": "B4GALT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFL0-1", "protein_name": "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7", "gene_name": "B3GNT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2A9-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3", "gene_name": "B3GNT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51888-1", "protein_name": "Prolargin", "gene_name": "PRELP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9C0J1-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4", "gene_name": "B3GNT4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P51884", "url": "https://www.uniprot.org/uniprotkb/P51884" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9405439", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 29 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cloning of a human UDP-galactose:2-acetamido-2-deoxy-D-glucose 3beta-galactosyltransferase catalyzing the formation of type 1 chains.", "journal": "The Journal of biological chemistry", "date": "1998", "authors": "Kolbinger F, Streiff MB, Katopodis AG", "reference": { "type": "PubMed", "id": "9417100", "url": "https://pubmed.ncbi.nlm.nih.gov/9417100" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H195-1", "protein_name": "Mucin-3B", "gene_name": "MUC3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43916-1", "protein_name": "Carbohydrate sulfotransferase 1", "gene_name": "CHST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14435-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 3", "gene_name": "GALNT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06828-1", "protein_name": "Fibromodulin", "gene_name": "FMOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P9A2-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 18", "gene_name": "GALNT18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SR1-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 10", "gene_name": "GALNT10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IXK2-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 12", "gene_name": "GALNT12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N428-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 16", "gene_name": "GALNT16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4C5-1", "protein_name": "Carbohydrate sulfotransferase 2", "gene_name": "CHST2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCG5-1", "protein_name": "Carbohydrate sulfotransferase 4", "gene_name": "CHST4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZS9-1", "protein_name": "Carbohydrate sulfotransferase 5", "gene_name": "CHST5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZX3-1", "protein_name": "Carbohydrate sulfotransferase 6", "gene_name": "CHST6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16112-1", "protein_name": "Aggrecan core protein", "gene_name": "ACAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99983-1", "protein_name": "Osteomodulin", "gene_name": "OMD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76EJ3-1", "protein_name": "Nucleotide sugar transporter SLC35D2", "gene_name": "SLC35D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11201-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1", "gene_name": "ST3GAL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11206-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4", "gene_name": "ST3GAL4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16842-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2", "gene_name": "ST3GAL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11203-1", "protein_name": "CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase", "gene_name": "ST3GAL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43505-1", "protein_name": "Beta-1,4-glucuronyltransferase 1", "gene_name": "B4GAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43825-1", "protein_name": "Beta-1,3-galactosyltransferase 2", "gene_name": "B3GALT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY97-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2", "gene_name": "B3GNT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60513-1", "protein_name": "Beta-1,4-galactosyltransferase 4", "gene_name": "B4GALT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43286-1", "protein_name": "Beta-1,4-galactosyltransferase 5", "gene_name": "B4GALT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LGC8-1", "protein_name": "Carbohydrate sulfotransferase 3", "gene_name": "CHST3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99102-1", "protein_name": "Mucin-4", "gene_name": "MUC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DR8-1", "protein_name": "Mucin-like protein 1", "gene_name": "MUCL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P98088-1", "protein_name": "Mucin-5AC", "gene_name": "MUC5AC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC84-1", "protein_name": "Mucin-5B", "gene_name": "MUC5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60938-1", "protein_name": "Keratocan", "gene_name": "KERA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y274-1", "protein_name": "Type 2 lactosamine alpha-2,3-sialyltransferase", "gene_name": "ST3GAL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20774-1", "protein_name": "Mimecan", "gene_name": "OGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCL4-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 6", "gene_name": "GALNT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCQ5-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 9", "gene_name": "GALNT9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q10472-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 1", "gene_name": "GALNT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY28-1", "protein_name": "Probable polypeptide N-acetylgalactosaminyltransferase 8", "gene_name": "GALNT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IS24-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 17", "gene_name": "GALNT17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z7M9-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 5", "gene_name": "GALNT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q10471-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 2", "gene_name": "GALNT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4A0-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 4", "gene_name": "GALNT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02817-1", "protein_name": "Mucin-2", "gene_name": "MUC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TAX7-1", "protein_name": "Mucin-7", "gene_name": "MUC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCW6-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 11", "gene_name": "GALNT11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SF2-1", "protein_name": "N-acetylgalactosaminyltransferase 7", "gene_name": "GALNT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUC8-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 13", "gene_name": "GALNT13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FL9-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 14", "gene_name": "GALNT14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02742-1", "protein_name": "Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase", "gene_name": "GCNT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60909-1", "protein_name": "Beta-1,4-galactosyltransferase 2", "gene_name": "B4GALT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UX72-1", "protein_name": "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9", "gene_name": "B3GNT9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBX8-1", "protein_name": "Beta-1,4-galactosyltransferase 6", "gene_name": "B4GALT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q67FW5-1", "protein_name": "Queuosine-tRNA galactosyltransferase", "gene_name": "QTGAL", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60512-1", "protein_name": "Beta-1,4-galactosyltransferase 3", "gene_name": "B4GALT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15291-1", "protein_name": "Beta-1,4-galactosyltransferase 1", "gene_name": "B4GALT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z7M8-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 8", "gene_name": "B3GNT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFL0-1", "protein_name": "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7", "gene_name": "B3GNT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2A9-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3", "gene_name": "B3GNT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BYG0-1", "protein_name": "Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase", "gene_name": "B3GNT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NS00-1", "protein_name": "Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1", "gene_name": "C1GALT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EU7-1", "protein_name": "C1GALT1-specific chaperone 1", "gene_name": "C1GALT1C1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N387-1", "protein_name": "Mucin-15", "gene_name": "MUC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N307-1", "protein_name": "Mucin-20", "gene_name": "MUC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H3R2-1", "protein_name": "Mucin-13", "gene_name": "MUC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z5P9-1", "protein_name": "Mucin-19", "gene_name": "MUC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6W4X9-1", "protein_name": "Mucin-6", "gene_name": "MUC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51888-1", "protein_name": "Prolargin", "gene_name": "PRELP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZMB0-1", "protein_name": "Acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase", "gene_name": "B3GNT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9C0J1-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4", "gene_name": "B3GNT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P109-1", "protein_name": "Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4", "gene_name": "GCNT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q49A17-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase-like 6", "gene_name": "GALNTL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95395-1", "protein_name": "Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3", "gene_name": "GCNT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZNI0-1", "protein_name": "Probable beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 7", "gene_name": "GCNT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4T8-1", "protein_name": "Inactive polypeptide N-acetylgalactosaminyltransferase-like protein 5", "gene_name": "GALNTL5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N3T1-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 15", "gene_name": "GALNT15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI7-1", "protein_name": "Mucin-16", "gene_name": "MUC16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5SSG8-1", "protein_name": "Mucin-21", "gene_name": "MUC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q685J3-1", "protein_name": "Mucin-17", "gene_name": "MUC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02505-1", "protein_name": "Mucin-3A", "gene_name": "MUC3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKN1-1", "protein_name": "Mucin-12", "gene_name": "MUC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNA3-1", "protein_name": "Alpha-1,4-N-acetylglucosaminyltransferase", "gene_name": "A4GNT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15941-1", "protein_name": "Mucin-1", "gene_name": "MUC1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P51884", "url": "https://www.uniprot.org/uniprotkb/P51884" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9417100", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 81 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The expanding beta 4-galactosyltransferase gene family: messages from the databanks.", "journal": "Glycobiology", "date": "1998", "authors": "Lo NW, Shaper JH, Pevsner J, Shaper NL", "reference": { "type": "PubMed", "id": "9597550", "url": "https://pubmed.ncbi.nlm.nih.gov/9597550" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { 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"Osteomodulin", "gene_name": "OMD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76EJ3-1", "protein_name": "Nucleotide sugar transporter SLC35D2", "gene_name": "SLC35D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11201-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1", "gene_name": "ST3GAL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11206-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4", "gene_name": "ST3GAL4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16842-1", "protein_name": "CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2", "gene_name": "ST3GAL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15907-1", "protein_name": "Beta-galactoside alpha-2,6-sialyltransferase 1", "gene_name": "ST6GAL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92186-1", "protein_name": "Alpha-2,8-sialyltransferase 8B", "gene_name": "ST8SIA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q11203-1", "protein_name": "CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase", "gene_name": "ST3GAL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43505-1", "protein_name": "Beta-1,4-glucuronyltransferase 1", "gene_name": "B4GAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY97-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2", "gene_name": "B3GNT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60513-1", "protein_name": "Beta-1,4-galactosyltransferase 4", "gene_name": "B4GALT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43286-1", "protein_name": "Beta-1,4-galactosyltransferase 5", "gene_name": "B4GALT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LGC8-1", "protein_name": "Carbohydrate sulfotransferase 3", "gene_name": "CHST3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9JJ04-1", "protein_name": "Beta-1,4-galactosyltransferase 4", "gene_name": "B4galt4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O60938-1", "protein_name": "Keratocan", "gene_name": "KERA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y274-1", "protein_name": "Type 2 lactosamine alpha-2,3-sialyltransferase", "gene_name": "ST3GAL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61647-1", "protein_name": "Alpha-2,8-sialyltransferase 8F", "gene_name": "ST8SIA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43173-1", "protein_name": "Alpha-N-acetylneuraminate alpha-2,8-sialyltransferase ST8SIA3", "gene_name": "ST8SIA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20774-1", "protein_name": "Mimecan", "gene_name": "OGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Z2Y2-1", "protein_name": "Beta-1,4-galactosyltransferase 2", "gene_name": "B4galt2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q91YY2-1", "protein_name": "Beta-1,4-galactosyltransferase 3", "gene_name": "B4galt3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O60909-1", "protein_name": "Beta-1,4-galactosyltransferase 2", "gene_name": "B4GALT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBX8-1", "protein_name": "Beta-1,4-galactosyltransferase 6", "gene_name": "B4GALT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60512-1", "protein_name": "Beta-1,4-galactosyltransferase 3", "gene_name": "B4GALT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15291-1", "protein_name": "Beta-1,4-galactosyltransferase 1", "gene_name": "B4GALT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFL0-1", "protein_name": "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7", "gene_name": "B3GNT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2A9-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3", "gene_name": "B3GNT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51888-1", "protein_name": "Prolargin", "gene_name": "PRELP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9C0J1-1", "protein_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4", "gene_name": "B3GNT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UQ53-1", "protein_name": "Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B", "gene_name": "MGAT4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBM8-1", "protein_name": "Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C", "gene_name": "MGAT4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM21-1", "protein_name": "Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A", "gene_name": "MGAT4A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P51884", "url": "https://www.uniprot.org/uniprotkb/P51884" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9597550", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 40 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": 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Immunol.", "date": "1999", "authors": "Jokiranta T S, Solomon A, Pangburn M K, Zipfel P F, Meri S", "reference": { "type": "PubMed", "id": "10510403", "url": "https://pubmed.ncbi.nlm.nih.gov/10510403" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P80748-1", "protein_name": "Immunoglobulin lambda variable 3-21", "gene_name": "IGLV3-21", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P80748", "url": "https://www.uniprot.org/uniprotkb/P80748" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10510403", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A new subgroup of human L-chains of the lambda-type. Primary structure of Bence-Jones protein DEL.", "journal": "Eur. J. Biochem.", "date": "1974", "authors": "Eulitz M", "reference": { "type": "PubMed", "id": "4452363", "url": "https://pubmed.ncbi.nlm.nih.gov/4452363" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P80748-1", "protein_name": "Immunoglobulin lambda variable 3-21", "gene_name": "IGLV3-21", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P80748", "url": "https://www.uniprot.org/uniprotkb/P80748" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.4452363", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Amino acid sequence of the lambda type light chain of a human IgGl myeloma protein (MOT) with unusual antigenicity: a possible new subgroup of lambda chain having a unique N-terminal sequence.", "journal": "Mol. 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Cell. 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Ontology", "url": "https://disease-ontology.org/term/DOID:10283", "name": "prostatic neoplasm", "description": "" }, { "id": "DOID:10283", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:10283", "name": "tumor of the prostate", "description": "" }, { "id": "MONDO:0010257", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010257", "name": "prostate cancer, hereditary, X-linked 1", "description": "" }, { "id": "MONDO:0010257", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010257", "name": "HPCX1", "description": "" }, { "id": "MONDO:0010257", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010257", "name": "prostate cancer, hereditary, X-linked 1", "description": "" }, { "id": "MONDO:0010405", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010405", "name": "prostate cancer, hereditary, X-linked 2", "description": "" }, { "id": "MONDO:0010405", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010405", "name": "HPCX2", "description": "" }, { "id": "MONDO:0010405", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010405", "name": "prostate cancer, hereditary, X-linked 2", "description": "" }, { "id": "MONDO:0011098", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011098", "name": "prostate cancer, hereditary, 1", "description": "Any familial prostate cancer in which the cause of the disease is a mutation in the RNASEL gene." }, { "id": "MONDO:0011098", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011098", "name": "RNASEL familial prostate cancer", "description": "" }, { "id": "MONDO:0011098", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011098", "name": "familial prostate cancer caused by mutation in RNASEL", "description": "" }, { "id": "MONDO:0011098", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011098", "name": "prostate cancer 1", "description": "" }, { "id": "MONDO:0011098", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011098", "name": "prostate cancer, hereditary, 1", "description": "" }, { "id": "MONDO:0011098", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011098", "name": "prostate cancer, hereditary, type 1", "description": "" }, { "id": "MONDO:0011098", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011098", "name": "HPC1", "description": "" }, { "id": "MONDO:0011270", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011270", "name": "prostate cancer, hereditary, 8", "description": "" }, { "id": "MONDO:0011270", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011270", "name": "prostate cancer, hereditary, 8", "description": "" }, { "id": "MONDO:0011270", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011270", "name": "prostate cancer, hereditary, type 8", "description": "" }, { "id": "MONDO:0011270", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011270", "name": "HPC8", "description": "" }, { "id": "MONDO:0012093", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012093", "name": "prostate cancer, hereditary, 3", "description": "" }, { "id": "MONDO:0012093", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012093", "name": "prostate cancer, hereditary, 3", "description": "" }, { "id": "MONDO:0012093", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012093", "name": "prostate cancer, hereditary, type 3", "description": "" }, { "id": "MONDO:0012093", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012093", "name": "prostate cancer, susceptibility to, 3", "description": "" }, { "id": "MONDO:0012093", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012093", "name": "HPC3", "description": "" }, { "id": "MONDO:0012094", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012094", "name": "prostate cancer, hereditary, 4", "description": "" }, { "id": "MONDO:0012094", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012094", "name": "prostate cancer, hereditary, 4", "description": "" }, { "id": "MONDO:0012094", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012094", "name": "prostate cancer, hereditary, type 4", "description": "" }, { "id": "MONDO:0012094", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012094", "name": "prostate cancer, susceptibility to, 4", "description": "" }, { "id": "MONDO:0012094", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012094", "name": "HPC4", "description": "" }, { "id": "MONDO:0012244", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012244", "name": "prostate cancer, hereditary, 5", "description": "" }, { "id": "MONDO:0012244", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012244", "name": "prostate cancer, hereditary, 5", "description": "" }, { "id": "MONDO:0012244", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012244", "name": "prostate cancer, hereditary, type 5", "description": "" }, { "id": "MONDO:0012244", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012244", "name": "HPC5", "description": "" }, { "id": "MONDO:0012300", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012300", "name": "prostate cancer, hereditary, 6", "description": "" }, { "id": "MONDO:0012300", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012300", "name": "prostate cancer, hereditary, 6", "description": "" }, { "id": "MONDO:0012300", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012300", "name": "prostate cancer, hereditary, type 6", "description": "" }, { "id": "MONDO:0012300", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012300", "name": "HPC6", "description": "" }, { "id": "MONDO:0012470", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012470", "name": "prostate cancer, hereditary, 7", "description": "" }, { "id": "MONDO:0012470", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012470", "name": "HPC7", "description": "" }, { "id": "MONDO:0012470", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012470", "name": "prostate cancer, hereditary, 7", "description": "" }, { "id": "MONDO:0012597", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012597", "name": "prostate cancer, hereditary, 9", "description": "" }, { "id": "MONDO:0012597", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012597", "name": "prostate cancer, hereditary, 9", "description": "" }, { "id": "MONDO:0012597", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012597", "name": "prostate cancer, hereditary, type 9", "description": "" }, { "id": "MONDO:0012597", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012597", "name": "HPC9", "description": "" }, { "id": "MONDO:0012620", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012620", "name": "prostate cancer, hereditary, 10", "description": "" }, { "id": "MONDO:0012620", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012620", "name": "HPC10", "description": "" }, { "id": "MONDO:0012620", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012620", "name": "prostate cancer, hereditary, 10", "description": "" }, { "id": "MONDO:0012741", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012741", "name": "prostate cancer, hereditary, 12", "description": "Any familial prostate cancer in which the cause of the disease is a mutation in the EHBP1 gene." }, { "id": "MONDO:0012741", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012741", "name": "EHBP1 familial prostate cancer", "description": "" }, { "id": "MONDO:0012741", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012741", "name": "familial prostate cancer caused by mutation in EHBP1", "description": "" }, { "id": "MONDO:0012741", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012741", "name": "prostate cancer, hereditary, 12", "description": "" }, { "id": "MONDO:0012741", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012741", "name": "prostate cancer, hereditary, type 12", "description": "" }, { "id": "MONDO:0012741", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012741", "name": "HPC12", "description": "" }, { "id": "MONDO:0012758", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012758", "name": "prostate cancer, hereditary, 13", "description": "Any familial prostate cancer in which the cause of the disease is a mutation in the MSMB gene." }, { "id": "MONDO:0012758", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012758", "name": "MSMB familial prostate cancer", "description": "" }, { "id": "MONDO:0012758", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012758", "name": "familial prostate cancer caused by mutation in MSMB", "description": "" }, { "id": "MONDO:0012758", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012758", "name": "prostate cancer, hereditary, 13", "description": "" }, { "id": "MONDO:0012758", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012758", "name": "prostate cancer, hereditary, type 13", "description": "" }, { "id": "MONDO:0012758", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012758", "name": "HPC13", "description": "" }, { "id": "MONDO:0012768", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012768", "name": "prostate cancer, hereditary, 11", "description": "" }, { "id": "MONDO:0012768", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012768", "name": "HPC11", "description": "" }, { "id": "MONDO:0012768", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012768", "name": "prostate cancer, hereditary, 11", "description": "" }, { "id": "MONDO:0012769", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012769", "name": "prostate cancer, hereditary, 14", "description": "" }, { "id": "MONDO:0012769", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012769", "name": "HPC14", "description": "" }, { "id": "MONDO:0012769", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012769", "name": "prostate cancer, hereditary, 14", "description": "" }, { "id": "MONDO:0012770", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012770", "name": "prostate cancer, hereditary, 15", "description": "" }, { "id": "MONDO:0012770", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012770", "name": "HPC15", "description": "" }, { "id": "MONDO:0012770", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0012770", "name": "prostate cancer, hereditary, 15", "description": "" }, { "id": "MONDO:0700275", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0700275", "name": "prostate cancer, hereditary", "description": "An instance of prostate cancer that is caused by an inherited genomic modification in an individual. Familial prostate cancer (FPC) is a malignant tumor of the prostate with an early onset. FPC is either asymptomatic or causes mictionary symptoms, erectile dysfunction, bone pain, venous compression and infectious or inflammatory syndrome (for the metastatic forms). It is also characterized by familial antecedents." }, { "id": "MIM:601518", "resource": "MIM", "url": "https://www.omim.org/entry/601518", "name": "Prostate cancer, hereditary, 1", "description": "Prostate cancer, hereditary, 1" }, { "id": "MIM:610997", "resource": "MIM", "url": "https://www.omim.org/entry/610997", "name": "Prostate cancer, hereditary, 9", "description": "Prostate cancer, hereditary, 9" }, { "id": "MIM:611868", "resource": "MIM", "url": "https://www.omim.org/entry/611868", "name": "Prostate cancer, hereditary, 12", "description": "Prostate cancer, hereditary, 12" }, { "id": "MIM:611928", "resource": "MIM", "url": "https://www.omim.org/entry/611928", "name": "Prostate cancer, hereditary, 13", "description": "Prostate cancer, hereditary, 13" }, { "id": "MIM:611955", "resource": "MIM", "url": "https://www.omim.org/entry/611955", "name": "Prostate cancer, hereditary, 11", "description": "Prostate cancer, hereditary, 11" }, { "id": "MIM:176807", "resource": "MIM", "url": "https://www.omim.org/entry/176807", "name": "Prostate cancer", "description": "Prostate cancer" } ], "unlinked_id_list": [], "evidence": [ { "id": "10283", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:10283" } ] }, { "disease_id": "DOID:0090075", "recommended_name": { "id": "DOID:0090075", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0090075", "name": "hypogonadotropic hypogonadism 15 with or without anosmia", "description": "A hypogonadotropic hypogonadism that has_material_basis_in mutation in the HS6ST1 gene on chromosome 2q14, sometimes in association with mutations in other genes." }, "synonyms": [ { "id": "MONDO:0013946", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0013946", "name": "hypogonadotropic hypogonadism 15 with or without anosmia", "description": "Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the HS6ST1 gene." }, { "id": "MONDO:0013946", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0013946", "name": "HS6ST1 hypogonadotropic hypogonadism", "description": "" }, { "id": "MONDO:0013946", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0013946", "name": "hypogonadotropic hypogonadism 15 with or without anosmia", "description": "" }, { "id": "MONDO:0013946", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0013946", "name": "hypogonadotropic hypogonadism caused by mutation in HS6ST1", "description": "" }, { "id": "MONDO:0013946", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0013946", "name": "HH15", "description": "" }, { "id": "MIM:614880", "resource": "MIM", "url": "https://www.omim.org/entry/614880", "name": "Hypogonadotropic hypogonadism 15 with or without anosmia", "description": "Hypogonadotropic hypogonadism 15 with or without anosmia" } ], "unlinked_id_list": [], "evidence": [ { "id": "614880", "database": "MIM", "url": "https://www.omim.org/entry/614880" }, { "id": "0090075", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:0090075" } ] }, { "disease_id": "DOID:0090078", "recommended_name": { "id": "DOID:0090078", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0090078", "name": "hypogonadotropic hypogonadism 7 with or without anosmia", "description": "A hypogonadotropic hypogonadism that has_material_basis_in homozygous or compound heterozygous mutation in the GNRHR gene on chromosome 4q13, sometimes in association with mutation in another gene. No patients with anosmia have been reported." }, "synonyms": [ { "id": "MONDO:0007794", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007794", "name": "hypogonadotropic hypogonadism 7 with or without anosmia", "description": "A hypogonadotropic hypogonadism that has material basis in homozygous or compound heterozygous mutation in the GNRHR gene on chromosome 4q13, sometimes in association with mutation in another gene. No patients with anosmia have been reported." }, { "id": "MONDO:0007794", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007794", "name": "hypogonadotropic hypogonadism 7 with or without anosmia", "description": "" }, { "id": "MONDO:0007794", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007794", "name": "hypogonadotropic hypogonadism 7 without anosmia", "description": "" }, { "id": "MONDO:0007794", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007794", "name": "HH7", "description": "" }, { "id": "MIM:146110", "resource": "MIM", "url": "https://www.omim.org/entry/146110", "name": "Hypogonadotropic hypogonadism 7 with or without anosmia", "description": "Hypogonadotropic hypogonadism 7 with or without anosmia" } ], "unlinked_id_list": [], "evidence": [ { "id": "0090078", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:0090078" } ] } ], "keywords": [ "biomuta", "somatic", "cancer", "disease", "ebi", "germline" ], "filter_code": "010000000000000000000.00000000000000.000000000001000000.00001.11.000.000", "uniprot_canonical_ac": "O60243-1" }, { "evidence": [ { "id": "rs121908627", "database": "dbSNP", "url": "https://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?type=rs&rs=rs121908627" }, { "id": "rs121908627", "database": "1000Genomes", "url": "https://www.ensembl.org/homo_sapiens/Variation/Explore?v=rs121908627" }, { "id": "rs121908627", "database": "ExAC", "url": "https://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?type=rs&rs=rs121908627" }, { "id": "rs121908627", "database": "TOPMed", "url": "https://www.ncbi.nlm.nih.gov/snp/rs121908627#frequency_tab" }, { "id": "rs121908627", "database": "gnomAD", "url": "http://gnomad.broadinstitute.org/awesome?query=rs121908627" }, { "id": "11528398", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/11528398" }, { "id": "27535533", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/27535533" } ], "glycoeffect": [], "start_pos": 696, "end_pos": 696, "sequence_org": "V", "sequence_mut": "M", "comment": "Germline mutation passed 1 filters: glycogene of type=glycogene, carbohydrate synthesis and metabolism/nucleotide synthesis.", "chr_id": "9", "chr_pos": "36217448", "ref_nt": "T", "alt_nt": "null", "minor_allelic_frequency": "", "site_lbl": "V696", "disease": [ { "disease_id": "DOID:0080718", "recommended_name": { "id": "DOID:0080718", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0080718", "name": "GNE myopathy", "description": "A myopathy that is characterized by progressive skeletal muscle atrophy, distal muscle weakness and bilateral foot drop caused by weakness of the anterior tibialis muscles with onset in early adulthood, and that has_material_basis_in mutations in the GNE gene which encodes the rate-limiting enzyme of sialic acid biosynthesis." }, "synonyms": [ { "id": "DOID:0080718", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0080718", "name": "Distal myopathy, Nonaka type", "description": "" }, { "id": "DOID:0080718", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0080718", "name": "Hereditary Inclusion Body Myopathy", "description": "" }, { "id": "DOID:0080718", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0080718", "name": "Nonaka myopathy", "description": "" }, { "id": "DOID:0080718", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:0080718", "name": "inclusion body myopathy 2", "description": "" }, { "id": "MONDO:0011603", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011603", "name": "GNE myopathy", "description": "Nonaka distal myopathy (described in Japan) and the quadriceps-sparing autosomal recessive inclusion body myopathy type 2 (IBM2; independently described in Iranian Jews and later in other Jewish and non-Jewish populations) constitute the same pathological entity, distinguished by the sparing of quadriceps." }, { "id": "MONDO:0011603", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011603", "name": "DMRV", "description": "" }, { "id": "MONDO:0011603", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011603", "name": "HIBM2", "description": "" }, { "id": "MONDO:0011603", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011603", "name": "IBM2", "description": "" }, { "id": "MONDO:0011603", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011603", "name": "Nonaka myopathy", "description": "" }, { "id": "MONDO:0011603", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011603", "name": "distal myopathy with rimmed vacuoles", "description": "" }, { "id": "MONDO:0011603", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011603", "name": "distal myopathy, Nonaka type", "description": "" }, { "id": "MONDO:0011603", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011603", "name": "hereditary inclusion body myopathy type 2", "description": "" }, { "id": "MONDO:0011603", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011603", "name": "inclusion body myopathy autosomal recessive", "description": "" }, { "id": "MONDO:0011603", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011603", "name": "inclusion body myopathy type 2", "description": "" }, { "id": "MONDO:0011603", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011603", "name": "quadriceps-sparing myopathy", "description": "" }, { "id": "MONDO:0011603", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011603", "name": "NM", "description": "" }, { "id": "MONDO:0011603", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011603", "name": "QSM", "description": "" }, { "id": "MONDO:0011603", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011603", "name": "inclusion body myopathy 2, autosomal recessive", "description": "" }, { "id": "MONDO:0011603", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011603", "name": "inclusion body myopathy, autosomal recessive", "description": "" }, { "id": "MONDO:0011603", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011603", "name": "inclusion body myopathy, quadriceps-sparing", "description": "" }, { "id": "MONDO:0011603", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011603", "name": "quadriceps sparing myopathy", "description": "" }, { "id": "MONDO:0011603", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011603", "name": "rimmed vacuole myopathy", "description": "" }, { "id": "MIM:605820", "resource": "MIM", "url": "https://www.omim.org/entry/605820", "name": "Nonaka myopathy", "description": "Nonaka myopathy" } ], "unlinked_id_list": [], "evidence": [ { "id": "0011603", "database": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011603" }, { "id": "605820", "database": "MIM", "url": "https://www.omim.org/entry/605820" }, { "id": "GNE", "database": "Genomics England", "url": "https://panelapp.genomicsengland.co.uk/panels/25/gene/GNE/#!details" }, { "id": "10020", "database": "GlyCosmos", "url": "https://glycosmos.org/glycogenes/show/10020#disease" }, { "id": "0080718", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:0080718" } ] }, { "disease_id": "DOID:3659", "recommended_name": { "id": "DOID:3659", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:3659", "name": "sialuria", "description": "A lysosomal storage disease characterized by increased sialic acid in the urine." }, "synonyms": [ { "id": "MONDO:0010028", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010028", "name": "sialuria", "description": "Sialuria is an extremely rare metabolic disorder described in fewer than 10 patients to date and characterized by variable signs and symptoms, mostly in infancy, including transient failure to thrive, slightly prolonged neonatal jaundice, equivocal or mild hepatomegaly, microcytic anemia, frequent upper respiratory infections, gastroenteritis, dehydration and flat and coarse facies. Learning difficulties and seizures may occur in childhood." }, { "id": "MONDO:0010028", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010028", "name": "sialuria", "description": "" }, { "id": "MONDO:0010028", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0010028", "name": "sialuria, French type", "description": "" }, { "id": "MONDO:0011449", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011449", "name": "Salla disease", "description": "Salla disease is the mildest form of the free sialic acid storage disorders, which primarily affect the nervous system. Infants with Salla disease typically begin to experience poor muscle tone (hypotonia) during the first year of life,followed by slowly progressive neurological problems. Signs and symptoms include intellectual disability and developmental delay; seizures ; ataxia ; muscle spasticity; and involuntary slow movements of the limbs (athetosis). About one-third of affected children learn to walk. It is caused by mutations in the SLC17A5 gene and is inherited in an autosomal recessive manner. Treatment is generally symptomatic and supportive." }, { "id": "MONDO:0011449", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011449", "name": "Salla disease", "description": "" }, { "id": "MONDO:0011449", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011449", "name": "sialic acid storage disease", "description": "" }, { "id": "MONDO:0011449", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0011449", "name": "SD", "description": "" }, { "id": "MIM:269921", "resource": "MIM", "url": "https://www.omim.org/entry/269921", "name": "Sialuria", "description": "Sialuria" }, { "id": "MIM:604369", "resource": "MIM", "url": "https://www.omim.org/entry/604369", "name": "Salla disease", "description": "Salla disease" } ], "unlinked_id_list": [], "evidence": [ { "id": "269921", "database": "MIM", "url": "https://www.omim.org/entry/269921" }, { "id": "3659", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:3659" }, { "id": "3659", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:3659" } ] } ], "keywords": [ "ebi", "germline", "disease" ], "filter_code": "000000000000000000010.00000000000000.000000000001000000.00001.11.000.000", "uniprot_canonical_ac": "Q9Y223-1" } ], "record_id": "pubmed.27535533", "abstract": "", "glycosylation": [], "mutagenesis": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 39 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Heterozygous lamin B1 and lamin B2 variants cause primary microcephaly and define a novel laminopathy.", "journal": "Genetics in medicine : official journal of the American College of Medical Genetics", "date": "2021", "authors": "Parry DA, Martin CA, Greene P, Marsh JA, Blyth M, Cox H, Donnelly D, Greenhalgh L, Greville-Heygate S, Harrison V, Lachlan K, McKenna C, Quigley AJ, Rea G, Robertson L, Suri M, Jackson AP", "reference": { "type": "PubMed", "id": "33033404", "url": "https://pubmed.ncbi.nlm.nih.gov/33033404" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q03252-1", "protein_name": "Lamin-B2", "gene_name": "LMNB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20700-1", "protein_name": "Lamin-B1", "gene_name": "LMNB1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q03252", "url": "https://www.uniprot.org/uniprotkb/Q03252" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.33033404", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Lamin B2 contributes to the proliferation of bladder cancer cells via activating the expression of cell division cycle\u2011associated protein 3.", "journal": "International journal of molecular medicine", "date": "2022", "authors": "Ji J, Li H, Chen J, Wang W", "reference": { "type": "PubMed", "id": "35775376", "url": "https://pubmed.ncbi.nlm.nih.gov/35775376" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q03252-1", "protein_name": "Lamin-B2", "gene_name": "LMNB2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q03252", "url": "https://www.uniprot.org/uniprotkb/Q03252" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.35775376", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "The human E48 antigen, highly homologous to the murine Ly-6 antigen ThB, is a GPI-anchored molecule apparently involved in keratinocyte cell-cell adhesion.", "journal": "J. Cell Biol.", "date": "1995", "authors": "Brakenhoff R H, Gerretsen M, Knippels E M, van Dijk M, van Essen H, Weghuis D O, Sinke R J, Snow G B, van Dongen G A", "reference": { "type": "PubMed", "id": "7790363", "url": "https://pubmed.ncbi.nlm.nih.gov/7790363" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q14210-1", "protein_name": "Lymphocyte antigen 6D", "gene_name": "LY6D", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q14210", "url": "https://www.uniprot.org/uniprotkb/Q14210" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7790363", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A gain of novel tissue specificity in the human Ly-6 gene E48.", "journal": "J. Immunol.", "date": "1997", "authors": "Brakenhoff RH, van Dijk M, Rood-Knippels EM, Snow GB", "reference": { "type": "PubMed", "id": "9366413", "url": "https://pubmed.ncbi.nlm.nih.gov/9366413" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q14210-1", "protein_name": "Lymphocyte antigen 6D", "gene_name": "LY6D", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q14210", "url": "https://www.uniprot.org/uniprotkb/Q14210" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9366413", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization and mapping to human chromosome 8q24.3 of Ly-6-related gene 9804 encoding an apparent homologue of mouse TSA-1.", "journal": "J. Immunol.", "date": "1998", "authors": "Shan X, Bourdeau A, Rhoton A, Wells D E, Cohen E H, Landgraf B E, Palfree R G", "reference": { "type": "PubMed", "id": "9551972", "url": "https://pubmed.ncbi.nlm.nih.gov/9551972" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q14210-1", "protein_name": "Lymphocyte antigen 6D", "gene_name": "LY6D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16553-1", "protein_name": "Lymphocyte antigen 6E", "gene_name": "LY6E", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q14210", "url": "https://www.uniprot.org/uniprotkb/Q14210" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9551972", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Adaptor signalling proteins Grb2 and Grb7 are recruited by human G6f, a novel member of the immunoglobulin superfamily encoded in the MHC.", "journal": "The Biochemical journal", "date": "2003", "authors": "De Vet EC, Aguado B, Campbell RD", "reference": { "type": "PubMed", "id": "12852788", "url": "https://pubmed.ncbi.nlm.nih.gov/12852788" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q5SQ64-1", "protein_name": "Lymphocyte antigen 6 complex locus protein G6f", "gene_name": "LY6G6F", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q5SQ64", "url": "https://www.uniprot.org/uniprotkb/Q5SQ64" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 281, "end_pos": 281, "sequence_org": "Y", "sequence_mut": "F", "comment": "No phosphorylation. No interaction with GRB2 and GRB7. No phosphorylation increase of p42/44 MAP kinase.", "evidence": [ { "database": "UniProtKB", "id": "Q5SQ64", "url": "https://www.uniprot.org/uniprotkb/Q5SQ64" }, { "database": "PubMed", "id": "12852788", "url": "https://pubmed.ncbi.nlm.nih.gov/12852788" } ], "uniprot_canonical_ac": "Q5SQ64-1" } ], "phosphorylation": [ { "start_pos": 281, "end_pos": 281, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine", "evidence": [ { "database": "UniProtKB", "id": "Q5SQ64", "url": "https://www.uniprot.org/uniprotkb/Q5SQ64" }, { "database": "PubMed", "id": "12852788", "url": "https://pubmed.ncbi.nlm.nih.gov/12852788" }, { "database": "iPTMnet", "id": "Q5SQ64", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q5SQ64" }, { "database": "PubMed", "id": "16941570", "url": "https://pubmed.ncbi.nlm.nih.gov/16941570" } ], "site_lbl": "Tyr281", "uniprot_canonical_ac": "Q5SQ64-1" } ], "record_id": "pubmed.12852788", "abstract": "", 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"residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Elucidation of N-glycosylation sites on human platelet proteins: a glycoproteomic approach.", "journal": "Molecular & cellular proteomics : MCP", "date": "2006", "authors": "Lewandrowski U, Moebius J, Walter U, Sickmann A", "reference": { "type": "PubMed", "id": "16263699", "url": "https://pubmed.ncbi.nlm.nih.gov/16263699" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q5SQ64-1", "protein_name": "Lymphocyte antigen 6 complex locus protein G6f", "gene_name": "LY6G6F", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UWL2-1", "protein_name": "Sushi domain-containing protein 1", "gene_name": "SUSD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99523-1", "protein_name": "Sortilin", "gene_name": "SORT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01008-1", "protein_name": "Antithrombin-III", "gene_name": "SERPINC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13510-1", "protein_name": "Acid ceramidase", "gene_name": "ASAH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10909-1", "protein_name": "Clusterin", "gene_name": "CLU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42892-1", "protein_name": "Endothelin-converting enzyme 1", "gene_name": "ECE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13586-1", "protein_name": "Stromal interaction molecule 1", "gene_name": "STIM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02679-1", "protein_name": "Fibrinogen gamma chain", "gene_name": "FGG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YB8-1", "protein_name": "ERO1-like protein beta", "gene_name": "ERO1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07359-1", "protein_name": "Platelet glycoprotein Ib alpha chain", "gene_name": "GP1BA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13201-1", "protein_name": "Multimerin-1", "gene_name": "MMRN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10619-1", "protein_name": "Lysosomal protective protein", "gene_name": "CTSA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92854-1", "protein_name": "Semaphorin-4D", "gene_name": "SEMA4D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01033-1", "protein_name": "Metalloproteinase inhibitor 1", "gene_name": "TIMP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6C2-1", "protein_name": "EMILIN-1", "gene_name": "EMILIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34810-1", "protein_name": "Macrosialin", "gene_name": "CD68", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96G23-1", "protein_name": "Ceramide synthase 2", "gene_name": "CERS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16278-1", "protein_name": "Beta-galactosidase", "gene_name": "GLB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07996-1", "protein_name": "Thrombospondin-1", "gene_name": "THBS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96005-1", "protein_name": "Putative lipid scramblase CLPTM1", "gene_name": "CLPTM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16671-1", "protein_name": "Platelet glycoprotein 4", "gene_name": "CD36", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02748-1", "protein_name": "Complement component C9", "gene_name": "C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02675-1", "protein_name": "Fibrinogen beta chain", "gene_name": "FGB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05106-1", "protein_name": "Integrin beta-3", "gene_name": "ITGB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4L1-1", "protein_name": "Hypoxia up-regulated protein 1", "gene_name": "HYOU1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23229-1", "protein_name": "Integrin alpha-6", "gene_name": "ITGA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17301-1", "protein_name": "Integrin alpha-2", "gene_name": "ITGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y251-1", "protein_name": "Heparanase", "gene_name": "HPSE", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"title": "High-density SNP screening of the major histocompatibility complex in systemic lupus erythematosus demonstrates strong evidence for independent susceptibility regions.", "journal": "PLoS genetics", "date": "2009", "authors": "Barcellos LF, May SL, Ramsay PP, Quach HL, Lane JA, Nititham J, Noble JA, Taylor KE, Quach DL, Chung SA, Kelly JA, Moser KL, Behrens TW, Seldin MF, Thomson G, Harley JB, Gaffney PM, Criswell LA", "reference": { "type": "PubMed", "id": "19851445", "url": "https://pubmed.ncbi.nlm.nih.gov/19851445" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q5SQ64-1", "protein_name": "Lymphocyte antigen 6 complex locus protein G6f", "gene_name": "LY6G6F", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H633-1", "protein_name": "Ribonuclease P protein subunit p21", "gene_name": "RPP21; TRIM39-RPP21", "tax_name": "Human" }, { "uniprot_canonical_ac": "O76002-1", "protein_name": "Olfactory receptor 2J2", "gene_name": "OR2J2", 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identifies three Loci influencing adiposity and fat distribution.", "journal": "PLoS genetics", "date": "2009", "authors": "Lindgren CM, Heid IM, Randall JC, Lamina C, Steinthorsdottir V, Qi L, Speliotes EK, Thorleifsson G, Willer CJ, Herrera BM, Jackson AU, Lim N, Scheet P, Soranzo N, Amin N, Aulchenko YS, Chambers JC, Drong A, Luan J, Lyon HN, Rivadeneira F, Sanna S, Timpson NJ, Zillikens MC, Zhao JH, Almgren P, Bandinelli S, Bennett AJ, Bergman RN, Bonnycastle LL, Bumpstead SJ, Chanock SJ, Cherkas L, Chines P, Coin L, Cooper C, Crawford G, Doering A, Dominiczak A, Doney AS, Ebrahim S, Elliott P, Erdos MR, Estrada K, Ferrucci L, Fischer G, Forouhi NG, Gieger C, Grallert H, Groves CJ, Grundy S, Guiducci C, Hadley D, Hamsten A, Havulinna AS, Hofman A, Holle R, Holloway JW, Illig T, Isomaa B, Jacobs LC, Jameson K, Jousilahti P, Karpe F, Kuusisto J, Laitinen J, Lathrop GM, Lawlor DA, Mangino M, McArdle WL, Meitinger T, Morken MA, Morris AP, Munroe P, Narisu N, Nordstrom A, Nordstrom P, Oostra BA, Palmer CN, Payne F, Peden JF, Prokopenko I, Renstrom F, Ruokonen A, Salomaa V, Sandhu MS, Scott LJ, Scuteri A, Silander K, Song K, Yuan X, Stringham HM, Swift AJ, Tuomi T, Uda M, Vollenweider P, Waeber G, Wallace C, Walters GB, Weedon MN, Witteman JC, Zhang C, Zhang W, Caulfield MJ, Collins FS, Davey Smith G, Day IN, Franks PW, Hattersley AT, Hu FB, Jarvelin MR, Kong A, Kooner JS, Laakso M, Lakatta E, Mooser V, Morris AD, Peltonen L, Samani NJ, Spector TD, Strachan DP, Tanaka T, Tuomilehto J, Uitterlinden AG, van Duijn CM, Wareham NJ, Hugh Watkins, Waterworth DM, Boehnke M, Deloukas P, Groop L, Hunter DJ, Thorsteinsdottir U, Schlessinger D, Wichmann HE, Frayling TM, Abecasis GR, Hirschhorn JN, Loos RJ, Stefansson K, Mohlke KL, Barroso I, McCarthy MI", "reference": { "type": "PubMed", "id": "19557161", "url": "https://pubmed.ncbi.nlm.nih.gov/19557161" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q5VWZ2-1", "protein_name": 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Natl. Acad. Sci. 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Teixeira J, Cabral Fernandes H, Verhoeven NM, Salomons GS, Santorelli FM, Cabral P, Amorim A, Jakobs C", "reference": { "type": "PubMed", "id": "16134148", "url": "https://pubmed.ncbi.nlm.nih.gov/16134148" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9H9P8-1", "protein_name": "L-2-hydroxyglutarate dehydrogenase, mitochondrial", "gene_name": "L2HGDH", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9H9P8", "url": "https://www.uniprot.org/uniprotkb/Q9H9P8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16134148", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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