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Purification and characterization of ATP-induced structural changes.", "journal": "The Journal of biological chemistry", "date": "1994-02-11", "authors": "Parsell D A, Kowal A S, Lindquist S", "reference": { "type": "PubMed", "id": "8308017", "url": "https://pubmed.ncbi.nlm.nih.gov/8308017" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P31539-1", "protein_name": "Heat shock protein 104", "gene_name": "HSP104", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P31539", "url": "https://www.uniprot.org/uniprotkb/P31539" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "mutagenesis": [ { "start_pos": 218, "end_pos": 218, "sequence_org": "K", "sequence_mut": "T", "comment": "Abolishes substrate binding. Unable to confer thermotolerance. 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Reduces ATP hydrolysis rate. Unable to confer thermotolerance. 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Biophys. Res. Commun.", "date": "1998", "authors": "Fujita K, Kawai R, Iwahashi H, Komatsu Y", "reference": { "type": "PubMed", "id": "9703962", "url": "https://pubmed.ncbi.nlm.nih.gov/9703962" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P31539-1", "protein_name": "Heat shock protein 104", "gene_name": "HSP104", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P31539", "url": "https://www.uniprot.org/uniprotkb/P31539" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.9703962", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Protein phosphatase 2A in Saccharomyces cerevisiae: effects on cell growth and bud morphogenesis.", "journal": "Mol. Cell. Biol.", "date": "1991", "authors": "Ronne H, Carlberg M, Hu G Z, Nehlin J O", "reference": { "type": "PubMed", "id": "1656215", "url": "https://pubmed.ncbi.nlm.nih.gov/1656215" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P31688-1", "protein_name": "Trehalose-phosphatase", "gene_name": "TPS2", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P32345-1", "protein_name": "Serine/threonine-protein phosphatase 4 catalytic subunit", "gene_name": "PPH3", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q05672-1", "protein_name": "RNA-binding suppressor of PAS kinase protein 1", "gene_name": "RBS1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P17255-1", "protein_name": "V-type proton ATPase catalytic subunit A", "gene_name": "VMA1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P23594-1", "protein_name": "Serine/threonine-protein phosphatase PP2A-1 catalytic subunit", "gene_name": "PPH21", "tax_name": "Baker's 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J. Biochem.", "date": "1993", "authors": "De Virgilio C, B\u00fcrckert N, Bell W, Jen\u00f6 P, Boller T, Wiemken A", "reference": { "type": "PubMed", "id": "8444170", "url": "https://pubmed.ncbi.nlm.nih.gov/8444170" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P31688-1", "protein_name": "Trehalose-phosphatase", "gene_name": "TPS2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P31688", "url": "https://www.uniprot.org/uniprotkb/P31688" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.8444170", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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Biol. Chem.", "date": "1998", "authors": "Bell W, Sun W, Hohmann S, Wera S, Reinders A, De Virgilio C, Wiemken A, Thevelein J M", "reference": { "type": "PubMed", "id": "9837904", "url": "https://pubmed.ncbi.nlm.nih.gov/9837904" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P31688-1", "protein_name": "Trehalose-phosphatase", "gene_name": "TPS2", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P38426-1", "protein_name": "Trehalose synthase complex regulatory subunit TPS3", "gene_name": "TPS3", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P38427-1", "protein_name": "Trehalose synthase complex regulatory subunit TSL1", "gene_name": "TSL1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q00764-1", "protein_name": "Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 56 kDa subunit", "gene_name": "TPS1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { 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[] } ] }, { "title": "Defects in protein glycosylation cause SHO1-dependent activation of a STE12 signaling pathway in yeast.", "journal": "Genetics", "date": "2000", "authors": "Cullen P J, Schultz J, Horecka J, Stevenson B J, Jigami Y, Sprague G F", "reference": { "type": "PubMed", "id": "10880465", "url": "https://pubmed.ncbi.nlm.nih.gov/10880465" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P31755-1", "protein_name": "Initiation-specific alpha-1,6-mannosyltransferase", "gene_name": "OCH1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P31755", "url": "https://www.uniprot.org/uniprotkb/P31755" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.10880465", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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transcription factor, Skn7p.", "journal": "Mol. 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alpha-1,6-polymannose outer chain from och1, och1 mnn1, and och1 mnn1 alg3 mutants of Saccharomyces cerevisiae.", "journal": "The Journal of biological chemistry", "date": "1993-12-15", "authors": "Nakanishi-Shindo Y, Nakayama K, Tanaka A, Toda Y, Jigami Y", "reference": { "type": "PubMed", "id": "8253757", "url": "https://pubmed.ncbi.nlm.nih.gov/8253757" }, "referenced_glycans": [ { "glytoucan_ac": "G72606LT" }, { "glytoucan_ac": "G43475FH" }, { "glytoucan_ac": "G97455PT" }, { "glytoucan_ac": "G98048XD" }, { "glytoucan_ac": "G91013DE" }, { "glytoucan_ac": "G01954TO" }, { "glytoucan_ac": "G51119RL" }, { "glytoucan_ac": "G30505TQ" } ], "referenced_proteins": [ { "uniprot_canonical_ac": "P31755-1", "protein_name": "Initiation-specific alpha-1,6-mannosyltransferase", "gene_name": "OCH1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P31755", "url": 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Bacteriol.", "date": "1992", "authors": "Minehart P L, Magasanik B", "reference": { "type": "PubMed", "id": "1347768", "url": "https://pubmed.ncbi.nlm.nih.gov/1347768" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32288-1", "protein_name": "Glutamine synthetase", "gene_name": "GLN1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32288", "url": "https://www.uniprot.org/uniprotkb/P32288" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.1347768", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Sequence of peptides from Saccharomyces cerevisiae glutamine synthetase. N-terminal peptide and ATP-binding domain.", "journal": "J. Biol. Chem.", "date": "1988", "authors": "Kim K H, Rhee S G", "reference": { "type": "PubMed", "id": "2891705", "url": "https://pubmed.ncbi.nlm.nih.gov/2891705" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32288-1", "protein_name": "Glutamine synthetase", "gene_name": "GLN1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32288", "url": "https://www.uniprot.org/uniprotkb/P32288" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.2891705", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Thiamin biosynthesis in eukaryotes: characterization of the enzyme-bound product of thiazole synthase from Saccharomyces cerevisiae and its implications in thiazole biosynthesis.", "journal": "Journal of the American Chemical Society", "date": "2006-06-07", "authors": "Chatterjee Abhishek, Jurgenson Christopher T, Schroeder Frank C, Ealick Steven E, Begley Tadhg P", "reference": { "type": "PubMed", "id": "16734458", "url": "https://pubmed.ncbi.nlm.nih.gov/16734458" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32318-1", "protein_name": "Thiamine thiazole synthase", "gene_name": "THI4", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32318", "url": "https://www.uniprot.org/uniprotkb/P32318" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structural insights into the function of the thiamin biosynthetic enzyme Thi4 from Saccharomyces cerevisiae.", "journal": "Biochemistry", "date": "2006", "authors": "Jurgenson Christopher T, Chatterjee Abhishek, Begley Tadhg P, Ealick Steven E", "reference": { "type": "PubMed", "id": "16964967", "url": "https://pubmed.ncbi.nlm.nih.gov/16964967" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32318-1", "protein_name": "Thiamine thiazole synthase", "gene_name": "THI4", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32318", "url": "https://www.uniprot.org/uniprotkb/P32318" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.16964967", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Saccharomyces cerevisiae THI4p is a suicide thiamine thiazole synthase.", "journal": "Nature", "date": "2011-10-26", "authors": "Chatterjee Abhishek, Abeydeera N Dinuka, Bale Shridhar, Pai Pei-Jing, Dorrestein Pieter C, Russell David H, Ealick Steven E, Begley Tadhg P", "reference": { "type": "PubMed", "id": "22031445", "url": "https://pubmed.ncbi.nlm.nih.gov/22031445" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32318-1", "protein_name": "Thiamine thiazole synthase", 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prevacuolar compartments in its function as the sorting receptor for multiple yeast vacuolar hydrolases.", "journal": "The Journal of cell biology", "date": "1996-05", "authors": "Cooper A A, Stevens T H", "reference": { "type": "PubMed", "id": "8636229", "url": "https://pubmed.ncbi.nlm.nih.gov/8636229" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32319-1", "protein_name": "Vacuolar protein sorting/targeting protein VPS10", "gene_name": "PEP1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P40438-1", "protein_name": "VPS10 homolog 1", "gene_name": "VTH1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P40890-1", "protein_name": "VPS10 homolog 2", "gene_name": "VTH2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32319", "url": "https://www.uniprot.org/uniprotkb/P32319" } ], "common_name": "Baker's yeast", 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"date": "1996-05-17", "authors": "Westphal V, Marcusson E G, Winther J R, Emr S D, van den Hazel H B", "reference": { "type": "PubMed", "id": "8662642", "url": "https://pubmed.ncbi.nlm.nih.gov/8662642" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32319-1", "protein_name": "Vacuolar protein sorting/targeting protein VPS10", "gene_name": "PEP1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P40438-1", "protein_name": "VPS10 homolog 1", "gene_name": "VTH1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P40890-1", "protein_name": "VPS10 homolog 2", "gene_name": "VTH2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32319", "url": "https://www.uniprot.org/uniprotkb/P32319" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": 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J, Jue C K, Zhao H, de Nobel H, Kurjan J, Lipke P N", "reference": { "type": "PubMed", "id": "11278672", "url": "https://pubmed.ncbi.nlm.nih.gov/11278672" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32323-1", "protein_name": "A-agglutinin anchorage subunit", "gene_name": "AGA1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32323", "url": "https://www.uniprot.org/uniprotkb/P32323" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.11278672", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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Cell. Biol.", "date": "1991", "authors": "Roy A, Lu C F, Marykwas D L, Lipke P N, Kurjan J", "reference": { "type": "PubMed", "id": "2072914", "url": "https://pubmed.ncbi.nlm.nih.gov/2072914" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32323-1", "protein_name": "A-agglutinin anchorage subunit", "gene_name": "AGA1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32323", "url": "https://www.uniprot.org/uniprotkb/P32323" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.2072914", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mating type-specific cell-cell recognition of Saccharomyces cerevisiae: cell wall attachment and active sites of a- and alpha-agglutinin.", "journal": "EMBO J.", "date": "1994", "authors": "Cappellaro C, Baldermann C, Rachel R, Tanner W", "reference": { "type": "PubMed", "id": "7957044", "url": "https://pubmed.ncbi.nlm.nih.gov/7957044" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32323-1", "protein_name": "A-agglutinin anchorage subunit", "gene_name": "AGA1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P32781-1", "protein_name": "A-agglutinin-binding subunit", "gene_name": "AGA2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32323", "url": "https://www.uniprot.org/uniprotkb/P32323" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "mutagenesis": [ { "start_pos": 25, "end_pos": 25, "sequence_org": "C", "sequence_mut": "S", "comment": "Abolishes agglutination; 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Gen. Genet.", "date": "1991", "authors": "Stucka R, Dequin S, Salmon J M, Gancedo C", "reference": { "type": "PubMed", "id": "1921979", "url": "https://pubmed.ncbi.nlm.nih.gov/1921979" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32327-1", "protein_name": "Pyruvate carboxylase 2", "gene_name": "PYC2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32327", "url": "https://www.uniprot.org/uniprotkb/P32327" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.1921979", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Polymorphism of the yeast pyruvate carboxylase 2 gene and protein: effects on protein biotinylation.", "journal": "Biochem. J.", "date": "1995", "authors": "Val D L, Chapman-Smith A, Walker M E, Cronan J E, Wallace J C", "reference": { "type": "PubMed", "id": "8554526", "url": "https://pubmed.ncbi.nlm.nih.gov/8554526" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32327-1", "protein_name": "Pyruvate carboxylase 2", "gene_name": "PYC2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32327", "url": "https://www.uniprot.org/uniprotkb/P32327" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.8554526", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Purification and characterization of a paired basic residue-specific yeast aspartic protease encoded by the YAP3 gene. Similarity to the mammalian pro-opiomelanocortin-converting enzyme.", "journal": "J. Biol. Chem.", "date": "1993", "authors": "Azaryan A V, Wong M, Friedman T C, Cawley N X, Estivariz F E, Chen H C, Loh Y P", "reference": { "type": "PubMed", "id": "8389368", "url": "https://pubmed.ncbi.nlm.nih.gov/8389368" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32329-1", "protein_name": "Aspartic proteinase 3", "gene_name": "YPS1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32329", "url": "https://www.uniprot.org/uniprotkb/P32329" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.8389368", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cleavage efficiency of the novel aspartic protease yapsin 1 (Yap3p) enhanced for substrates with arginine residues flanking the P1 site: correlation with electronegative active-site pockets predicted by molecular modeling.", "journal": "Biochemistry", "date": "1998", "authors": "Olsen V, Guruprasad K, Cawley N X, Chen H C, Blundell T L, Loh Y P", "reference": { "type": "PubMed", "id": "9485427", "url": "https://pubmed.ncbi.nlm.nih.gov/9485427" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P32329-1", "protein_name": "Aspartic proteinase 3", "gene_name": "YPS1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P32329", "url": "https://www.uniprot.org/uniprotkb/P32329" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.9485427", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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