[ { "title": "Rab10 regulates membrane transport through early endosomes of polarized Madin-Darby canine kidney cells.", "journal": "Molecular biology of the cell", "date": "2006", "authors": "Babbey CM, Ahktar N, Wang E, Chen CC, Grant BD, Dunn KW", "reference": { "type": "PubMed", "id": "16641372", "url": "https://pubmed.ncbi.nlm.nih.gov/16641372" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16641372", "abstract": "", "glycosylation": 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serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKX5-1", "protein_name": "Integrin alpha-11", "gene_name": "ITGA11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08648-1", "protein_name": "Integrin alpha-5", "gene_name": "ITGA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05556-1", "protein_name": "Integrin beta-1", "gene_name": "ITGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23229-1", "protein_name": "Integrin alpha-6", "gene_name": "ITGA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17301-1", "protein_name": "Integrin alpha-2", "gene_name": "ITGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56199-1", "protein_name": "Integrin alpha-1", "gene_name": "ITGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 31, "end_pos": 31, "sequence_org": "T", "sequence_mut": "N", "comment": "Defects in GTP-binding. Decrease in integrin-binding.", "evidence": [ { "database": "UniProtKB", "id": "P35282", "url": "https://www.uniprot.org/uniprotkb/P35282" }, { "database": "PubMed", "id": "16754960", "url": "https://pubmed.ncbi.nlm.nih.gov/16754960" } ], "uniprot_canonical_ac": "P35282-1" }, { "start_pos": 76, "end_pos": 76, "sequence_org": "Q", "sequence_mut": "L", "comment": "Defects in GTP hydrolysis. Increase in integrin-binding.", "evidence": [ { "database": "UniProtKB", "id": "P35282", "url": "https://www.uniprot.org/uniprotkb/P35282" }, { "database": "PubMed", "id": "16754960", "url": "https://pubmed.ncbi.nlm.nih.gov/16754960" } ], "uniprot_canonical_ac": "P35282-1" }, { "start_pos": 1170, "end_pos": 1170, "sequence_org": "R", "sequence_mut": "A", "comment": "No effect on RAB21-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9UKX5", "url": "https://www.uniprot.org/uniprotkb/Q9UKX5" }, { "database": "PubMed", "id": "16754960", "url": "https://pubmed.ncbi.nlm.nih.gov/16754960" } ], "uniprot_canonical_ac": "Q9UKX5-1" }, { "start_pos": 1159, "end_pos": 1159, "sequence_org": "F", "sequence_mut": "A", "comment": "No significant reduction of RAB21-binding by co-immunoprecipitation assay; when associated with A-1160 and A-1162.", "evidence": [ { "database": "UniProtKB", "id": "P17301", "url": "https://www.uniprot.org/uniprotkb/P17301" }, { "database": "PubMed", "id": "16754960", "url": "https://pubmed.ncbi.nlm.nih.gov/16754960" } ], "uniprot_canonical_ac": "P17301-1" }, { "start_pos": 1160, "end_pos": 1160, "sequence_org": "K", "sequence_mut": "A", "comment": "No effect on RAB21-binding. Significant reduction of RAB21-binding; when associated with A-1161. Shows defective cytokinesis on collagen, but not on fibronectin; when associated with A-1161.", "evidence": [ { "database": "UniProtKB", "id": "P17301", "url": "https://www.uniprot.org/uniprotkb/P17301" }, { "database": "PubMed", "id": "16754960", "url": "https://pubmed.ncbi.nlm.nih.gov/16754960" }, { "database": "PubMed", "id": "18804435", "url": "https://pubmed.ncbi.nlm.nih.gov/18804435" } ], "uniprot_canonical_ac": "P17301-1" }, { "start_pos": 1161, "end_pos": 1161, "sequence_org": "R", "sequence_mut": "A", "comment": "Significant reduction of RAB21-binding; when associated with A-1160. Shows defective cytokinesis on collagen, but not on fibronectin; when associated with A-1160.", "evidence": [ { "database": "UniProtKB", "id": "P17301", "url": "https://www.uniprot.org/uniprotkb/P17301" }, { "database": "PubMed", "id": "16754960", "url": "https://pubmed.ncbi.nlm.nih.gov/16754960" }, { "database": "PubMed", "id": "18804435", "url": "https://pubmed.ncbi.nlm.nih.gov/18804435" } ], "uniprot_canonical_ac": "P17301-1" }, { "start_pos": 1162, "end_pos": 1162, "sequence_org": "K", "sequence_mut": "A", "comment": "No significant reduction of RAB21-binding by co-immunoprecipitation assay; when associated with A-1159 and A-1160.", "evidence": [ { "database": "UniProtKB", "id": "P17301", "url": "https://www.uniprot.org/uniprotkb/P17301" }, { "database": "PubMed", "id": "16754960", "url": "https://pubmed.ncbi.nlm.nih.gov/16754960" }, { "database": "PubMed", "id": "18804435", "url": "https://pubmed.ncbi.nlm.nih.gov/18804435" } ], "uniprot_canonical_ac": "P17301-1" }, { "start_pos": 1162, "end_pos": 1162, "sequence_org": "K", "sequence_mut": "P", "comment": "Markedly weakens RAB21-binding. Shows defective cytokinesis on collagen, but not on fibronectin.", "evidence": [ { "database": "UniProtKB", "id": "P17301", "url": "https://www.uniprot.org/uniprotkb/P17301" }, { "database": "PubMed", "id": "16754960", "url": "https://pubmed.ncbi.nlm.nih.gov/16754960" }, { "database": "PubMed", "id": "18804435", "url": "https://pubmed.ncbi.nlm.nih.gov/18804435" } ], "uniprot_canonical_ac": "P17301-1" }, { "start_pos": 1164, "end_pos": 1164, "sequence_org": "E", "sequence_mut": "A", "comment": "Significant reduction of RAB21-binding; when associated with A-1160; A-1161 and A-1165.", "evidence": [ { "database": "UniProtKB", "id": "P17301", "url": "https://www.uniprot.org/uniprotkb/P17301" }, { "database": "PubMed", "id": "16754960", "url": "https://pubmed.ncbi.nlm.nih.gov/16754960" } ], "uniprot_canonical_ac": "P17301-1" }, { "start_pos": 1165, "end_pos": 1165, "sequence_org": "K", "sequence_mut": "A", "comment": "Significant reduction of RAB21-binding; when associated with A-1160; A-1161 and A-1164.", "evidence": [ { "database": "UniProtKB", "id": "P17301", "url": "https://www.uniprot.org/uniprotkb/P17301" }, { "database": "PubMed", "id": "16754960", "url": "https://pubmed.ncbi.nlm.nih.gov/16754960" } ], "uniprot_canonical_ac": "P17301-1" } ], "record_id": "pubmed.16754960", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 97 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Constitutive GDP/GTP exchange and secretion-dependent GTP hydrolysis activity for Rab27 in platelets.", "journal": "The Journal of biological chemistry", "date": "2006", "authors": "Kondo H, Shirakawa R, Higashi T, Kawato M, Fukuda M, Kita T, Horiuchi H", "reference": { "type": "PubMed", "id": "16880209", "url": "https://pubmed.ncbi.nlm.nih.gov/16880209" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16880209", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 89 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Rab35 regulates an endocytic recycling pathway essential for the terminal steps of cytokinesis.", "journal": "Current biology : CB", "date": "2006", "authors": "Kouranti I, Sachse M, Arouche N, Goud B, Echard A", "reference": { "type": "PubMed", "id": "16950109", "url": "https://pubmed.ncbi.nlm.nih.gov/16950109" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 22, "end_pos": 22, "sequence_org": "S", "sequence_mut": "N", "comment": "Destabilization of the intercellular bridge during cytokinesis. Strong reduction in fast recycling.", "evidence": [ { "database": "UniProtKB", "id": "Q15286", "url": "https://www.uniprot.org/uniprotkb/Q15286" }, { "database": "PubMed", "id": "16950109", "url": "https://pubmed.ncbi.nlm.nih.gov/16950109" } ], "uniprot_canonical_ac": "Q15286-1" }, { "start_pos": 67, "end_pos": 67, "sequence_org": "Q", "sequence_mut": "L", "comment": "Loss of GTPase activity. Increased fast recycling.", "evidence": [ { "database": "UniProtKB", "id": "Q15286", "url": "https://www.uniprot.org/uniprotkb/Q15286" }, { "database": "PubMed", "id": "16950109", "url": "https://pubmed.ncbi.nlm.nih.gov/16950109" } ], "uniprot_canonical_ac": "Q15286-1" } ], "record_id": "pubmed.16950109", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 89 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Rab38 and Rab32 control post-Golgi trafficking of melanogenic enzymes.", "journal": "The Journal of cell biology", "date": "2006", "authors": "Wasmeier C, Romao M, Plowright L, Bennett DC, Raposo G, Seabra MC", "reference": { "type": "PubMed", "id": "17043139", "url": "https://pubmed.ncbi.nlm.nih.gov/17043139" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", 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}, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": 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"gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": 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}, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Rab GTPases containing a CAAX motif are processed post-geranylgeranylation by proteolysis and methylation.", "journal": "The Journal of biological chemistry", "date": "2007", "authors": "Leung KF, Baron R, Ali BR, Magee AI, Seabra MC", "reference": { "type": "PubMed", "id": "17114793", "url": "https://pubmed.ncbi.nlm.nih.gov/17114793" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXH6-1", "protein_name": "Ras-related protein Rab-40A", "gene_name": "RAB40A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14088-1", "protein_name": "Ras-related protein Rab-33A", "gene_name": "RAB33A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULW5-1", "protein_name": "Ras-related protein Rab-26", "gene_name": "RAB26", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53611-1", "protein_name": "Geranylgeranyl transferase type-2 subunit beta", "gene_name": "RABGGTB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0T7-1", "protein_name": "Ras-related protein Rab-17", "gene_name": "RAB17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4Z0-2", "protein_name": "Ras-related protein Rab-42", "gene_name": "RAB42", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YS6-1", "protein_name": "Ras-related protein Rab-43", "gene_name": "RAB43", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62491-1", "protein_name": "Ras-related protein Rab-11A", "gene_name": "RAB11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92696-1", "protein_name": "Geranylgeranyl transferase type-2 subunit alpha", "gene_name": "RABGGTA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P59190-1", "protein_name": "Ras-related protein Rab-15", "gene_name": "RAB15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15771-1", "protein_name": "Ras-related protein Rab-30", "gene_name": "RAB30", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "A4D1S5-1", "protein_name": "Ras-related protein Rab-19", "gene_name": "RAB19", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95755-1", "protein_name": "Ras-related protein Rab-36", "gene_name": "RAB36", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57735-1", "protein_name": "Ras-related protein Rab-25", "gene_name": "RAB25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96E17-1", "protein_name": "Ras-related protein Rab-3C", "gene_name": "RAB3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULC3-1", "protein_name": "Ras-related protein Rab-23", "gene_name": "RAB23", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q969Q5-1", "protein_name": "Ras-related protein Rab-24", "gene_name": "RAB24", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z6P3-1", "protein_name": "Ras-related protein Rab-44", "gene_name": "RAB44", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95716-1", "protein_name": "Ras-related protein Rab-3D", "gene_name": "RAB3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20337-1", "protein_name": "Ras-related protein Rab-3B", "gene_name": "RAB3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NX57-1", "protein_name": "Ras-related protein Rab-20", "gene_name": "RAB20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14966-1", "protein_name": "Ras-related protein Rab-29", "gene_name": "RAB29", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61018-1", "protein_name": "Ras-related protein Rab-4B", "gene_name": "RAB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20338-1", "protein_name": "Ras-related protein Rab-4A", "gene_name": "RAB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WUD1-1", "protein_name": "Ras-related protein Rab-2B", "gene_name": "RAB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BZG1-1", "protein_name": "Ras-related protein Rab-34", "gene_name": "RAB34", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15907-1", "protein_name": "Ras-related protein Rab-11B", "gene_name": "RAB11B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12829-1", "protein_name": "Ras-related protein Rab-40B", "gene_name": "RAB40B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H082-1", "protein_name": "Ras-related protein Rab-33B", "gene_name": "RAB33B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JT25-1", "protein_name": "Ras-related protein Rab-41", "gene_name": "RAB41", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96S21-1", "protein_name": "Ras-related protein Rab-40C", "gene_name": "RAB40C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12974-1", "protein_name": "Protein tyrosine phosphatase type IVA 2", "gene_name": "PTP4A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein 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"protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP 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"tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": 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"Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17132146", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 89 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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{ "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Gapex-5, a Rab31 guanine nucleotide exchange factor that regulates Glut4 trafficking in adipocytes.", "journal": "Cell metabolism", "date": "2007", "authors": "Lodhi IJ, Chiang SH, Chang L, Vollenweider D, Watson RT, Inoue M, Pessin JE, Saltiel AR", "reference": { "type": "PubMed", "id": "17189207", "url": "https://pubmed.ncbi.nlm.nih.gov/17189207" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { 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"uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": 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{ "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"gene_name": "Rab31", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8CJ53-1", "protein_name": "Cdc42-interacting protein 4", "gene_name": "Trip10", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17189207", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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"tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17208202", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 89 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "ALS2CL, a novel ALS2-interactor, modulates ALS2-mediated endosome dynamics.", "journal": "Biochemical and biophysical research communications", "date": "2007", "authors": "Suzuki-Utsunomiya K, Hadano S, Otomo A, Kunita R, Mizumura H, Osuga H, Ikeda JE", "reference": { "type": "PubMed", "id": "17239822", "url": "https://pubmed.ncbi.nlm.nih.gov/17239822" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": 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"P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I26-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "Als2cl", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein 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"Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 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"gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": 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"gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17239822", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 90 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "TRAPPI tethers COPII vesicles by binding the coat subunit Sec23.", "journal": "Nature", "date": "2007", "authors": "Cai H, Yu S, Menon S, Cai Y, Lazarova D, Fu C, Reinisch K, Hay JC, Ferro-Novick S", "reference": { "type": "PubMed", "id": "17287728", "url": "https://pubmed.ncbi.nlm.nih.gov/17287728" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15498-1", "protein_name": "Synaptobrevin homolog YKT6", "gene_name": "YKT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQW1-1", "protein_name": "Protein transport protein Sec31B", "gene_name": "SEC31B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00743-1", "protein_name": "Serine/threonine-protein phosphatase 6 catalytic subunit", "gene_name": "PPP6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9R7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 3", "gene_name": "PPP6R3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H115-1", "protein_name": "Beta-soluble NSF attachment protein", "gene_name": "NAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15514-1", "protein_name": "Amphiregulin", "gene_name": "AREG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49257-1", "protein_name": "Protein ERGIC-53", "gene_name": "LMAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42261-1", "protein_name": "Glutamate receptor 1", "gene_name": "GRIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR2-1", "protein_name": "Cathepsin Z", "gene_name": "CTSZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95406-1", "protein_name": "Protein cornichon homolog 1", "gene_name": "CNIH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", "protein_name": "Protein SEC13 homolog", "gene_name": "SEC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75396-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "SEC22B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JE7-1", "protein_name": "Protein transport protein Sec16B", "gene_name": "SEC16B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95487-1", "protein_name": "Protein transport protein Sec24B", "gene_name": "SEC24B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56962-1", "protein_name": "Syntaxin-17", "gene_name": "STX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 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"Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15303-1", "protein_name": "Protein transport protein SEC23", "gene_name": "SEC23", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17287728", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 147 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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Benetka W, Schneider G, Sirota FL, Eisenhaber F", "reference": { "type": "PubMed", "id": "17411337", "url": "https://pubmed.ncbi.nlm.nih.gov/17411337" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXH6-1", "protein_name": "Ras-related protein Rab-40A", "gene_name": "RAB40A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14088-1", "protein_name": "Ras-related protein Rab-33A", "gene_name": "RAB33A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULW5-1", "protein_name": "Ras-related protein Rab-26", "gene_name": "RAB26", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53611-1", "protein_name": "Geranylgeranyl transferase type-2 subunit beta", "gene_name": "RABGGTB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0T7-1", "protein_name": "Ras-related protein Rab-17", "gene_name": "RAB17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4Z0-2", "protein_name": "Ras-related protein Rab-42", "gene_name": "RAB42", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YS6-1", "protein_name": "Ras-related protein Rab-43", "gene_name": "RAB43", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62491-1", "protein_name": "Ras-related protein Rab-11A", "gene_name": "RAB11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein 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"uniprot_canonical_ac": "P57735-1", "protein_name": "Ras-related protein Rab-25", "gene_name": "RAB25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96E17-1", "protein_name": "Ras-related protein Rab-3C", "gene_name": "RAB3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULC3-1", "protein_name": "Ras-related protein Rab-23", "gene_name": "RAB23", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q969Q5-1", "protein_name": "Ras-related protein Rab-24", "gene_name": "RAB24", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z6P3-1", "protein_name": "Ras-related protein Rab-44", "gene_name": "RAB44", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95716-1", "protein_name": "Ras-related protein Rab-3D", "gene_name": 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"Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14966-1", "protein_name": "Ras-related protein Rab-29", "gene_name": "RAB29", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61018-1", "protein_name": "Ras-related protein Rab-4B", "gene_name": "RAB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20338-1", "protein_name": "Ras-related protein Rab-4A", "gene_name": "RAB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFA0-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 32", "gene_name": "USP32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WUD1-1", "protein_name": "Ras-related protein Rab-2B", "gene_name": "RAB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VW32-1", "protein_name": "BRO1 domain-containing protein BROX", "gene_name": "BROX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BZG1-1", "protein_name": "Ras-related protein Rab-34", "gene_name": "RAB34", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15907-1", "protein_name": "Ras-related protein Rab-11B", "gene_name": "RAB11B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12829-1", "protein_name": "Ras-related protein Rab-40B", "gene_name": "RAB40B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H082-1", "protein_name": "Ras-related protein Rab-33B", "gene_name": "RAB33B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JT25-1", "protein_name": "Ras-related protein Rab-41", "gene_name": "RAB41", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z3G6-1", "protein_name": "Prickle-like protein 2", "gene_name": "PRICKLE2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96S21-1", "protein_name": "Ras-related protein Rab-40C", "gene_name": "RAB40C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12974-1", "protein_name": "Protein tyrosine phosphatase type IVA 2", "gene_name": "PTP4A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL26-1", "protein_name": "Ras-related protein Rab-22A", "gene_name": "RAB22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61019-1", "protein_name": "Ras-related protein Rab-2A", "gene_name": "RAB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MT3-1", "protein_name": "Prickle-like protein 1", "gene_name": "PRICKLE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AX2-1", "protein_name": "Ras-related protein Rab-37", "gene_name": "RAB37", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17411337", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 70 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Rab18 inhibits secretory activity in neuroendocrine cells by interacting with secretory granules.", "journal": "Traffic (Copenhagen, Denmark)", "date": "2007", "authors": "Vazquez-Martinez R, Cruz-Garcia D, Duran-Prado M, Peinado JR, Castano JP, Malagon MM", "reference": { "type": "PubMed", "id": "17488286", "url": "https://pubmed.ncbi.nlm.nih.gov/17488286" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14203-1", "protein_name": "Dynactin subunit 1", "gene_name": "DCTN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZ32-1", "protein_name": "Actin-related protein 10", "gene_name": "ACTR10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PEY2-1", "protein_name": "Tubulin alpha-3E chain", "gene_name": "TUBA3E", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00399-1", "protein_name": "Dynactin subunit 6", "gene_name": "DCTN6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43034-1", "protein_name": "Platelet-activating factor acetylhydrolase IB subunit beta", "gene_name": "PAFAH1B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68402-1", "protein_name": "Platelet-activating factor acetylhydrolase IB subunit alpha2", "gene_name": "PAFAH1B2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRZ7-1", "protein_name": "1-acyl-sn-glycerol-3-phosphate acyltransferase gamma", "gene_name": "AGPAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P47756-2", "protein_name": "F-actin-capping protein subunit beta", "gene_name": "CAPZB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P47755-1", "protein_name": "F-actin-capping protein subunit alpha-2", "gene_name": "CAPZA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52907-1", "protein_name": "F-actin-capping protein subunit alpha-1", "gene_name": "CAPZA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13409-1", "protein_name": "Cytoplasmic dynein 1 intermediate chain 2", "gene_name": "DYNC1I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14576-1", "protein_name": "Cytoplasmic dynein 1 intermediate chain 1", "gene_name": "DYNC1I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6G9-1", "protein_name": "Cytoplasmic dynein 1 light intermediate chain 1", "gene_name": "DYNC1LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15102-1", "protein_name": "Platelet-activating factor acetylhydrolase IB subunit alpha1", "gene_name": "PAFAH1B3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NNZ2-1", "protein_name": "Tubulin beta 8B", "gene_name": "TUBB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3ZCM7-1", "protein_name": "Tubulin beta-8 chain", "gene_name": "TUBB8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q10472-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 1", "gene_name": "GALNT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q10471-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 2", "gene_name": "GALNT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P47712-1", "protein_name": "Cytosolic phospholipase A2", "gene_name": "PLA2G4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5EB77-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "Rab18", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61163-1", "protein_name": "Alpha-centractin", "gene_name": "ACTR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96G01-1", "protein_name": "Protein bicaudal D homolog 1", "gene_name": "BICD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TD16-1", "protein_name": "Protein bicaudal D homolog 2", "gene_name": "BICD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13561-1", "protein_name": "Dynactin subunit 2", "gene_name": "DCTN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJW0-1", "protein_name": "Dynactin subunit 4", "gene_name": "DCTN4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTE1-1", "protein_name": "Dynactin subunit 5", "gene_name": "DCTN5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60733-1", "protein_name": "85/88 kDa calcium-independent phospholipase A2", "gene_name": "PLA2G6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H853-1", "protein_name": "Tubulin-like protein alpha-4B", "gene_name": "TUBA4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KX2-1", "protein_name": "F-actin-capping protein subunit alpha-3", "gene_name": "CAPZA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75935-1", "protein_name": "Dynactin subunit 3", "gene_name": "DCTN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43237-1", "protein_name": "Cytoplasmic dynein 1 light intermediate chain 2", "gene_name": "DYNC1LI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14204-1", "protein_name": "Cytoplasmic dynein 1 heavy chain 1", "gene_name": "DYNC1H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NHL2-1", "protein_name": "Tubulin alpha chain-like 3", "gene_name": "TUBAL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY65-1", "protein_name": "Tubulin alpha-8 chain", "gene_name": "TUBA8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17488286", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 138 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Specific Rab GTPase-activating proteins define the Shiga toxin and epidermal growth factor uptake pathways.", "journal": "The Journal of cell biology", "date": "2007", "authors": "Fuchs E, Haas AK, Spooner RA, Yoshimura S, Lord JM, Barr FA", "reference": { "type": "PubMed", "id": "17562788", "url": "https://pubmed.ncbi.nlm.nih.gov/17562788" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N2H4-1", "protein_name": "Protein SYS1 homolog", "gene_name": "SYS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15498-1", "protein_name": "Synaptobrevin homolog YKT6", "gene_name": "YKT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQW1-1", "protein_name": "Protein transport protein Sec31B", "gene_name": "SEC31B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00743-1", "protein_name": "Serine/threonine-protein phosphatase 6 catalytic subunit", "gene_name": "PPP6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9R7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 3", "gene_name": "PPP6R3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H115-1", "protein_name": "Beta-soluble NSF attachment protein", "gene_name": "NAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15514-1", "protein_name": "Amphiregulin", "gene_name": "AREG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13795-1", "protein_name": "ADP-ribosylation factor-related protein 1", "gene_name": "ARFRP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40616-1", "protein_name": "ADP-ribosylation factor-like protein 1", "gene_name": "ARL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49257-1", "protein_name": "Protein ERGIC-53", "gene_name": "LMAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42261-1", "protein_name": "Glutamate receptor 1", "gene_name": "GRIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YS6-1", "protein_name": "Ras-related protein Rab-43", "gene_name": "RAB43", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR2-1", "protein_name": "Cathepsin Z", "gene_name": "CTSZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MW5-1", "protein_name": "Conserved oligomeric Golgi complex subunit 8", "gene_name": "COG8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95406-1", "protein_name": "Protein cornichon homolog 1", "gene_name": "CNIH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", "protein_name": "Protein SEC13 homolog", "gene_name": "SEC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75396-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "SEC22B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JE7-1", "protein_name": "Protein transport protein Sec16B", "gene_name": "SEC16B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95487-1", "protein_name": "Protein transport protein Sec24B", "gene_name": "SEC24B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60499-1", "protein_name": "Syntaxin-10", "gene_name": "STX10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56962-1", "protein_name": "Syntaxin-17", "gene_name": "STX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96HU1-1", "protein_name": "Small G protein signaling modulator 3", "gene_name": "SGSM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2V7-1", "protein_name": "Conserved oligomeric Golgi complex subunit 6", "gene_name": "COG6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15836-1", "protein_name": "Vesicle-associated membrane protein 3", "gene_name": "VAMP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92805-1", "protein_name": "Golgin subfamily A member 1", "gene_name": "GOLGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43493-2", "protein_name": "Trans-Golgi network integral membrane protein 2", "gene_name": "TGOLN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75379-1", "protein_name": "Vesicle-associated membrane protein 4", "gene_name": "VAMP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing protein 10", "gene_name": "TMED10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VIR6-4", "protein_name": "Vacuolar protein sorting-associated protein 53 homolog", "gene_name": "VPS53", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14653-1", "protein_name": "Golgi SNAP receptor complex member 2", "gene_name": "GOSR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWJ2-1", "protein_name": "GRIP and coiled-coil domain-containing protein 2", "gene_name": "GCC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43752-1", "protein_name": "Syntaxin-6", "gene_name": "STX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRA0-1", "protein_name": "N-alpha-acetyltransferase 38, NatC auxiliary subunit", "gene_name": "NAA38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N1B4-1", "protein_name": "Vacuolar protein sorting-associated protein 52 homolog", "gene_name": "VPS52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53365-1", "protein_name": "Arfaptin-2", "gene_name": "ARFIP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13439-1", "protein_name": "Golgin subfamily A member 4", "gene_name": "GOLGA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WTW3-1", "protein_name": "Conserved oligomeric Golgi complex subunit 1", "gene_name": "COG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JB2-1", "protein_name": "Conserved oligomeric Golgi complex subunit 3", "gene_name": "COG3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9E3-1", "protein_name": "Conserved oligomeric Golgi complex subunit 4", "gene_name": "COG4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P83436-1", "protein_name": "Conserved oligomeric Golgi complex subunit 7", "gene_name": "COG7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14746-1", "protein_name": "Conserved oligomeric Golgi complex subunit 2", "gene_name": "COG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UP83-2", "protein_name": "Conserved oligomeric Golgi complex subunit 5", "gene_name": "COG5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94955-1", "protein_name": "Rho-related BTB domain-containing protein 3", "gene_name": "RHOBTB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q147X3-1", "protein_name": "N-alpha-acetyltransferase 30", "gene_name": "NAA30", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZE5-1", "protein_name": "N-alpha-acetyltransferase 35, NatC auxiliary subunit", "gene_name": "NAA35", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z6M1-1", "protein_name": "Rab9 effector protein with kelch motifs", "gene_name": "RABEPK", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UIL1-1", "protein_name": "Short coiled-coil protein", "gene_name": "SCOC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P1Q0-1", "protein_name": "Vacuolar protein sorting-associated protein 54", "gene_name": "VPS54", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UID3-1", "protein_name": "Vacuolar protein sorting-associated protein 51 homolog", "gene_name": "VPS51", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ9-2", "protein_name": "Vesicle transport through interaction with t-SNAREs homolog 1A", "gene_name": "VTI1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60664-1", "protein_name": "Perilipin-3", "gene_name": "PLIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P82094-1", "protein_name": "TATA element modulatory factor", "gene_name": "TMF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11717-1", "protein_name": "Cation-independent mannose-6-phosphate receptor", "gene_name": "IGF2R", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14662-1", "protein_name": "Syntaxin-16", "gene_name": "STX16", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20645-1", "protein_name": "Cation-dependent mannose-6-phosphate receptor", "gene_name": "M6PR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92738-1", "protein_name": "USP6 N-terminal-like protein", "gene_name": "USP6NL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96CN9-1", "protein_name": "GRIP and coiled-coil domain-containing protein 1", "gene_name": "GCC1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 150, "end_pos": 150, "sequence_org": "R", "sequence_mut": "A", "comment": "Loss of GAP activity on RAB5A and RAB43.", "evidence": [ { "database": "UniProtKB", "id": "Q92738", "url": "https://www.uniprot.org/uniprotkb/Q92738" }, { "database": "PubMed", "id": "11099046", "url": "https://pubmed.ncbi.nlm.nih.gov/11099046" }, { "database": "PubMed", "id": "17562788", "url": "https://pubmed.ncbi.nlm.nih.gov/17562788" }, { "database": "PubMed", "id": "16086013", "url": "https://pubmed.ncbi.nlm.nih.gov/16086013" } ], "uniprot_canonical_ac": "Q92738-1" } ], "record_id": "pubmed.17562788", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 186 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A core complex of BBS proteins cooperates with the GTPase Rab8 to promote ciliary membrane biogenesis.", "journal": "Cell", "date": "2007", "authors": "Nachury MV, Loktev AV, Zhang Q, Westlake CJ, Peranen J, Merdes A, Slusarski DC, Scheller RH, Bazan JF, Sheffield VC, Jackson PK", "reference": { "type": "PubMed", "id": "17574030", "url": "https://pubmed.ncbi.nlm.nih.gov/17574030" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SQ7-1", "protein_name": "Serologically defined colon cancer antigen 8", "gene_name": "SDCCAG8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TAP6-1", "protein_name": "Centrosomal protein of 76 kDa", "gene_name": "CEP76", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51955-1", "protein_name": "Serine/threonine-protein kinase Nek2", "gene_name": "NEK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15154-1", "protein_name": "Pericentriolar material 1 protein", "gene_name": "PCM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULH1-1", "protein_name": "Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1", "gene_name": "ASAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00471-1", "protein_name": "Exocyst complex component 5", "gene_name": "EXOC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5BJF6-1", "protein_name": "Outer dense fiber protein 2", "gene_name": "ODF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14008-1", "protein_name": "Cytoskeleton-associated protein 5", "gene_name": "CKAP5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96GX1-1", "protein_name": "Tectonic-2", "gene_name": "TCTN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95684-1", "protein_name": "Centrosomal protein 43", "gene_name": "CEP43", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEP8-3", "protein_name": "Centrosomal protein of 192 kDa", "gene_name": "CEP192", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KP1-1", "protein_name": "Exocyst complex component 2", "gene_name": "EXOC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13563-1", "protein_name": "Polycystin-2", "gene_name": "PKD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49368-1", "protein_name": "T-complex protein 1 subunit gamma", "gene_name": "CCT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62491-1", "protein_name": "Ras-related protein Rab-11A", "gene_name": "RAB11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV77-1", "protein_name": "Cyclic nucleotide-gated channel alpha-4", "gene_name": "CNGA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BV73-1", "protein_name": "Centrosome-associated protein CEP250", "gene_name": "CEP250", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43034-1", "protein_name": "Platelet-activating factor acetylhydrolase IB subunit beta", "gene_name": "PAFAH1B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08100-1", "protein_name": "Rhodopsin", "gene_name": "RHO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50991-1", "protein_name": "T-complex protein 1 subunit delta", "gene_name": "CCT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ55-1", "protein_name": "Tau-tubulin kinase 2", "gene_name": "TTBK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXR1-2", "protein_name": "Nuclear distribution protein nudE homolog 1", "gene_name": "NDE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32745-1", "protein_name": "Somatostatin receptor type 3", "gene_name": "SSTR3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75154-1", "protein_name": "Rab11 family-interacting protein 3", "gene_name": "RAB11FIP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NL6-1", "protein_name": "Sodium channel and clathrin linker 1", "gene_name": "SCLT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15078-1", "protein_name": "Centrosomal protein of 290 kDa", "gene_name": "CEP290", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53350-1", "protein_name": "Serine/threonine-protein kinase PLK1", "gene_name": "PLK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15051-1", "protein_name": "IQ calmodulin-binding motif-containing protein 1", "gene_name": "IQCB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3SYG4-1", "protein_name": "Protein PTHB1", "gene_name": "BBS9", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95613-1", "protein_name": "Pericentrin", "gene_name": "PCNT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N3I7-1", "protein_name": "BBSome complex member BBS5", "gene_name": "BBS5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JTW2-1", "protein_name": "Centrosomal protein of 78 kDa", "gene_name": "CEP78", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BYV8-1", "protein_name": "Centrosomal protein of 41 kDa", "gene_name": "CEP41", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96SN8-1", "protein_name": "CDK5 regulatory subunit-associated protein 2", "gene_name": "CDK5RAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0F7-1", "protein_name": "ADP-ribosylation factor-like protein 6", "gene_name": "ARL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99871-1", "protein_name": "HAUS augmin-like complex subunit 7", "gene_name": "HAUS7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06493-1", "protein_name": "Cyclin-dependent kinase 1", "gene_name": "CDK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2K1-4", "protein_name": "Coiled-coil and C2 domain-containing protein 2A", "gene_name": "CC2D2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2I6-1", "protein_name": "Ninein-like protein", "gene_name": "NINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8K8P3-1", "protein_name": "Protein SFI1 homolog", "gene_name": "SFI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPV0-1", "protein_name": "Centrosomal protein of 164 kDa", "gene_name": "CEP164", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43303-1", "protein_name": "Centriolar coiled-coil protein of 110 kDa", "gene_name": "CCP110", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94986-4", "protein_name": "Centrosomal protein of 152 kDa", "gene_name": "CEP152", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41208-1", "protein_name": "Centrin-2", "gene_name": "CETN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5TB80-1", "protein_name": "Centrosomal protein of 162 kDa", "gene_name": "CEP162", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q66GS9-1", "protein_name": "Centrosomal protein of 135 kDa", "gene_name": "CEP135", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86XR8-1", "protein_name": "Centrosomal protein of 57 kDa", "gene_name": "CEP57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96ST8-1", "protein_name": "Centrosomal protein of 89 kDa", "gene_name": "CEP89", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y592-1", "protein_name": "Centrosomal protein of 83 kDa", "gene_name": "CEP83", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN4-1", "protein_name": "Centrosomal protein of 131 kDa", "gene_name": "CEP131", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z7A1-1", "protein_name": "Centriolin", "gene_name": "CNTRL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14028-1", "protein_name": "Cyclic nucleotide-gated channel beta-1", "gene_name": "CNGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13409-1", "protein_name": "Cytoplasmic dynein 1 intermediate chain 2", "gene_name": "DYNC1I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07437-1", "protein_name": "Tubulin beta chain", "gene_name": "TUBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TAM2-1", "protein_name": "Tetratricopeptide repeat protein 8", "gene_name": "TTC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2MV58-1", "protein_name": "Tectonic-1", "gene_name": "TCTN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ6-1", "protein_name": "HAUS augmin-like complex subunit 3", "gene_name": "HAUS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17987-1", "protein_name": "T-complex protein 1 subunit alpha", "gene_name": "TCP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75161-1", "protein_name": "Nephrocystin-4", "gene_name": "NPHP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IW35-1", "protein_name": "Centrosomal protein of 97 kDa", "gene_name": "CEP97", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00444-1", "protein_name": "Serine/threonine-protein kinase PLK4", "gene_name": "PLK4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC77-1", "protein_name": "Centrosomal P4.1-associated protein", "gene_name": "CPAP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NHQ1-1", "protein_name": "Centrosomal protein of 70 kDa", "gene_name": "CEP70", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61163-1", "protein_name": "Alpha-centractin", "gene_name": "ACTR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99996-2", "protein_name": "A-kinase anchor protein 9", "gene_name": "AKAP9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49674-1", "protein_name": "Casein kinase I isoform epsilon", "gene_name": "CSNK1E", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15691-1", "protein_name": "Microtubule-associated protein RP/EB family member 1", "gene_name": "MAPRE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFJ9-1", "protein_name": "BBSome complex member BBS1", "gene_name": "BBS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18085-1", "protein_name": "ADP-ribosylation factor 4", "gene_name": "ARF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCU4-1", "protein_name": "Centrosome-associated protein ALMS1", "gene_name": "ALMS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWZ6-1", "protein_name": "BBSome complex member BBS7", "gene_name": "BBS7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MT8-1", "protein_name": "Centrosomal protein of 63 kDa", "gene_name": "CEP63", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07900-1", "protein_name": "Heat shock protein HSP 90-alpha", "gene_name": "HSP90AA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RK4-1", "protein_name": "BBSome complex member BBS4", "gene_name": "BBS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96CS2-1", "protein_name": "HAUS augmin-like complex subunit 1", "gene_name": "HAUS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15259-1", "protein_name": "Nephrocystin-1", "gene_name": "NPHP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXC9-1", "protein_name": "BBSome complex member BBS2", "gene_name": "BBS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N157-1", "protein_name": "Jouberin", "gene_name": "AHI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92538-4", "protein_name": "Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1", "gene_name": "GBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16280-1", "protein_name": "Cyclic nucleotide-gated channel alpha-2", "gene_name": "CNGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BPU9-1", "protein_name": "B9 domain-containing protein 2", "gene_name": "B9D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TAM1-1", "protein_name": "BBSome complex assembly protein BBS10", "gene_name": "BBS10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZW61-1", "protein_name": "Chaperonin-containing T-complex member BBS12", "gene_name": "BBS12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IYI6-1", "protein_name": "Exocyst complex component 8", "gene_name": "EXOC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPM9-1", "protein_name": "B9 domain-containing protein 1", "gene_name": "B9D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13561-1", "protein_name": "Dynactin subunit 2", "gene_name": "DCTN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8MTZ0-1", "protein_name": "BBSome-interacting protein 1", "gene_name": "BBIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78371-1", "protein_name": "T-complex protein 1 subunit beta", "gene_name": "CCT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPJ1-1", "protein_name": "Molecular chaperone MKKS", "gene_name": "MKKS", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A65-1", "protein_name": "Exocyst complex component 4", "gene_name": "EXOC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23258-1", "protein_name": "Tubulin gamma-1 chain", "gene_name": "TUBG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4AC94-5", "protein_name": "C2 domain-containing protein 3", "gene_name": "C2CD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVX0-1", "protein_name": "HAUS augmin-like complex subunit 2", "gene_name": "HAUS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4H7-1", "protein_name": "HAUS augmin-like complex subunit 6", "gene_name": "HAUS6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15019-1", "protein_name": "Septin-2", "gene_name": "SEPTIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6D7-1", "protein_name": "HAUS augmin-like complex subunit 4", "gene_name": "HAUS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT25-1", "protein_name": "HAUS augmin-like complex subunit 8", "gene_name": "HAUS8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48643-1", "protein_name": "T-complex protein 1 subunit epsilon", "gene_name": "CCT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P98161-1", "protein_name": "Polycystin-1", "gene_name": "PKD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P209-1", "protein_name": "Centrosomal protein of 72 kDa", "gene_name": "CEP72", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75935-1", "protein_name": "Dynactin subunit 3", "gene_name": "DCTN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z460-1", "protein_name": "CLIP-associating protein 1", "gene_name": "CLASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5T7B8-1", "protein_name": "Kinesin-like protein KIF24", "gene_name": "KIF24", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14204-1", "protein_name": "Cytoplasmic dynein 1 heavy chain 1", "gene_name": "DYNC1H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43805-1", "protein_name": "Microtubule nucleation factor SSNA1", "gene_name": "SSNA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60645-1", "protein_name": "Exocyst complex component 3", "gene_name": "EXOC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPT5-3", "protein_name": "Exocyst complex component 7", "gene_name": "EXOC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NV70-1", "protein_name": "Exocyst complex component 1", "gene_name": "EXOC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TES7-1", "protein_name": "Fas-binding factor 1", "gene_name": "FBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94927-1", "protein_name": "HAUS augmin-like complex subunit 5", "gene_name": "HAUS5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NHV4-1", "protein_name": "Protein NEDD1", "gene_name": "NEDD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TAG9-1", "protein_name": "Exocyst complex component 6", "gene_name": "EXOC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQ48-1", "protein_name": "Leucine zipper transcription factor-like protein 1", "gene_name": "LZTFL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5HYA8-1", "protein_name": "Meckelin", "gene_name": "TMEM67", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99705-1", "protein_name": "Melanin-concentrating hormone receptor 1", "gene_name": "MCHR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50990-1", "protein_name": "T-complex protein 1 subunit theta", "gene_name": "CCT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6NUS6-1", "protein_name": "Tectonic-3", "gene_name": "TCTN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0N5-1", "protein_name": "Transmembrane protein 216", "gene_name": "TMEM216", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61981-1", "protein_name": "14-3-3 protein gamma", "gene_name": "YWHAG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30153-1", "protein_name": "Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform", "gene_name": "PPP2R1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96L34-1", "protein_name": "MAP/microtubule affinity-regulating kinase 4", "gene_name": "MARK4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17574030", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 271 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Functional dissection of Rab GTPases involved in primary cilium formation.", "journal": "The Journal of cell biology", "date": "2007", "authors": "Yoshimura S, Egerer J, Fuchs E, Haas AK, Barr FA", "reference": { "type": "PubMed", "id": "17646400", "url": "https://pubmed.ncbi.nlm.nih.gov/17646400" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SQ7-1", "protein_name": "Serologically defined colon cancer antigen 8", "gene_name": "SDCCAG8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TAP6-1", "protein_name": "Centrosomal protein of 76 kDa", "gene_name": "CEP76", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51955-1", "protein_name": "Serine/threonine-protein kinase Nek2", "gene_name": "NEK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15154-1", "protein_name": "Pericentriolar material 1 protein", "gene_name": "PCM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULH1-1", "protein_name": "Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1", "gene_name": "ASAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00471-1", "protein_name": "Exocyst complex component 5", "gene_name": "EXOC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5BJF6-1", "protein_name": "Outer dense fiber protein 2", "gene_name": "ODF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14008-1", "protein_name": "Cytoskeleton-associated protein 5", "gene_name": "CKAP5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96GX1-1", "protein_name": "Tectonic-2", "gene_name": "TCTN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95684-1", "protein_name": "Centrosomal protein 43", "gene_name": "CEP43", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEP8-3", "protein_name": "Centrosomal protein of 192 kDa", "gene_name": "CEP192", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KP1-1", "protein_name": "Exocyst complex component 2", "gene_name": "EXOC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13563-1", "protein_name": "Polycystin-2", "gene_name": "PKD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62491-1", "protein_name": "Ras-related protein Rab-11A", "gene_name": "RAB11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV77-1", "protein_name": "Cyclic nucleotide-gated channel alpha-4", "gene_name": "CNGA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BV73-1", "protein_name": "Centrosome-associated protein CEP250", "gene_name": "CEP250", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43034-1", "protein_name": "Platelet-activating factor acetylhydrolase IB subunit beta", "gene_name": "PAFAH1B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08100-1", "protein_name": "Rhodopsin", "gene_name": "RHO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ55-1", "protein_name": "Tau-tubulin kinase 2", "gene_name": "TTBK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXR1-2", "protein_name": "Nuclear distribution protein nudE homolog 1", "gene_name": "NDE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75154-1", "protein_name": "Rab11 family-interacting protein 3", "gene_name": "RAB11FIP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NL6-1", "protein_name": "Sodium channel and clathrin linker 1", "gene_name": "SCLT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15078-1", "protein_name": "Centrosomal protein of 290 kDa", "gene_name": "CEP290", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53350-1", "protein_name": "Serine/threonine-protein kinase PLK1", "gene_name": "PLK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15051-1", "protein_name": "IQ calmodulin-binding motif-containing protein 1", "gene_name": "IQCB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95613-1", "protein_name": "Pericentrin", "gene_name": "PCNT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JTW2-1", "protein_name": "Centrosomal protein of 78 kDa", "gene_name": "CEP78", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BYV8-1", "protein_name": "Centrosomal protein of 41 kDa", "gene_name": "CEP41", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96SN8-1", "protein_name": "CDK5 regulatory subunit-associated protein 2", "gene_name": "CDK5RAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99871-1", "protein_name": "HAUS augmin-like complex subunit 7", "gene_name": "HAUS7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06493-1", "protein_name": "Cyclin-dependent kinase 1", "gene_name": "CDK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2K1-4", "protein_name": "Coiled-coil and C2 domain-containing protein 2A", "gene_name": "CC2D2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2I6-1", "protein_name": "Ninein-like protein", "gene_name": "NINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8K8P3-1", "protein_name": "Protein SFI1 homolog", "gene_name": "SFI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPV0-1", "protein_name": "Centrosomal protein of 164 kDa", "gene_name": "CEP164", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43303-1", "protein_name": "Centriolar coiled-coil protein of 110 kDa", "gene_name": "CCP110", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94986-4", "protein_name": "Centrosomal protein of 152 kDa", "gene_name": "CEP152", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41208-1", "protein_name": "Centrin-2", "gene_name": "CETN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5TB80-1", "protein_name": "Centrosomal protein of 162 kDa", "gene_name": "CEP162", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q66GS9-1", "protein_name": "Centrosomal protein of 135 kDa", "gene_name": "CEP135", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86XR8-1", "protein_name": "Centrosomal protein of 57 kDa", "gene_name": "CEP57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96ST8-1", "protein_name": "Centrosomal protein of 89 kDa", "gene_name": "CEP89", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y592-1", "protein_name": "Centrosomal protein of 83 kDa", "gene_name": "CEP83", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN4-1", "protein_name": "Centrosomal protein of 131 kDa", "gene_name": "CEP131", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z7A1-1", "protein_name": "Centriolin", "gene_name": "CNTRL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14028-1", "protein_name": "Cyclic nucleotide-gated channel beta-1", "gene_name": "CNGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13409-1", "protein_name": "Cytoplasmic dynein 1 intermediate chain 2", "gene_name": "DYNC1I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07437-1", "protein_name": "Tubulin beta chain", "gene_name": "TUBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2MV58-1", "protein_name": "Tectonic-1", "gene_name": "TCTN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ6-1", "protein_name": "HAUS augmin-like complex subunit 3", "gene_name": "HAUS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75161-1", "protein_name": "Nephrocystin-4", "gene_name": "NPHP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IW35-1", "protein_name": "Centrosomal protein of 97 kDa", "gene_name": "CEP97", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00444-1", "protein_name": "Serine/threonine-protein kinase PLK4", "gene_name": "PLK4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC77-1", "protein_name": "Centrosomal P4.1-associated protein", "gene_name": "CPAP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NHQ1-1", "protein_name": "Centrosomal protein of 70 kDa", "gene_name": "CEP70", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61163-1", "protein_name": "Alpha-centractin", "gene_name": "ACTR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99996-2", "protein_name": "A-kinase anchor protein 9", "gene_name": "AKAP9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49674-1", "protein_name": "Casein kinase I isoform epsilon", "gene_name": "CSNK1E", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15691-1", "protein_name": "Microtubule-associated protein RP/EB family member 1", "gene_name": "MAPRE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18085-1", "protein_name": "ADP-ribosylation factor 4", "gene_name": "ARF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCU4-1", "protein_name": "Centrosome-associated protein ALMS1", "gene_name": "ALMS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MT8-1", "protein_name": "Centrosomal protein of 63 kDa", "gene_name": "CEP63", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07900-1", "protein_name": "Heat shock protein HSP 90-alpha", "gene_name": "HSP90AA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96CS2-1", "protein_name": "HAUS augmin-like complex subunit 1", "gene_name": "HAUS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15259-1", "protein_name": "Nephrocystin-1", "gene_name": "NPHP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N157-1", "protein_name": "Jouberin", "gene_name": "AHI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92538-4", "protein_name": "Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1", "gene_name": "GBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16280-1", "protein_name": "Cyclic nucleotide-gated channel alpha-2", "gene_name": "CNGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BPU9-1", "protein_name": "B9 domain-containing protein 2", "gene_name": "B9D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IYI6-1", "protein_name": "Exocyst complex component 8", "gene_name": "EXOC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPM9-1", "protein_name": "B9 domain-containing protein 1", "gene_name": "B9D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13561-1", "protein_name": "Dynactin subunit 2", "gene_name": "DCTN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A65-1", "protein_name": "Exocyst complex component 4", "gene_name": "EXOC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23258-1", "protein_name": "Tubulin gamma-1 chain", "gene_name": "TUBG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4AC94-5", "protein_name": "C2 domain-containing protein 3", "gene_name": "C2CD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVX0-1", "protein_name": "HAUS augmin-like complex subunit 2", "gene_name": "HAUS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4H7-1", "protein_name": "HAUS augmin-like complex subunit 6", "gene_name": "HAUS6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15019-1", "protein_name": "Septin-2", "gene_name": "SEPTIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6D7-1", "protein_name": "HAUS augmin-like complex subunit 4", "gene_name": "HAUS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT25-1", "protein_name": "HAUS augmin-like complex subunit 8", "gene_name": "HAUS8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P98161-1", "protein_name": "Polycystin-1", "gene_name": "PKD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P209-1", "protein_name": "Centrosomal protein of 72 kDa", "gene_name": "CEP72", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75935-1", "protein_name": "Dynactin subunit 3", "gene_name": "DCTN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z460-1", "protein_name": "CLIP-associating protein 1", "gene_name": "CLASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5T7B8-1", "protein_name": "Kinesin-like protein KIF24", "gene_name": "KIF24", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14204-1", "protein_name": "Cytoplasmic dynein 1 heavy chain 1", "gene_name": "DYNC1H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43805-1", "protein_name": "Microtubule nucleation factor SSNA1", "gene_name": "SSNA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60645-1", "protein_name": "Exocyst complex component 3", "gene_name": "EXOC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPT5-3", "protein_name": "Exocyst complex component 7", "gene_name": "EXOC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NV70-1", "protein_name": "Exocyst complex component 1", "gene_name": "EXOC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TES7-1", "protein_name": "Fas-binding factor 1", "gene_name": "FBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94927-1", "protein_name": "HAUS augmin-like complex subunit 5", "gene_name": "HAUS5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NHV4-1", "protein_name": "Protein NEDD1", "gene_name": "NEDD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TAG9-1", "protein_name": "Exocyst complex component 6", "gene_name": "EXOC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5HYA8-1", "protein_name": "Meckelin", "gene_name": "TMEM67", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6NUS6-1", "protein_name": "Tectonic-3", "gene_name": "TCTN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0N5-1", "protein_name": "Transmembrane protein 216", "gene_name": "TMEM216", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61981-1", "protein_name": "14-3-3 protein gamma", "gene_name": "YWHAG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30153-1", "protein_name": "Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform", "gene_name": "PPP2R1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96L34-1", "protein_name": "MAP/microtubule affinity-regulating kinase 4", "gene_name": "MARK4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17646400", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 200 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of TBC7 having TBC domain as a novel binding protein to TSC1-TSC2 complex.", "journal": "Biochemical and biophysical research communications", "date": "2007", "authors": "Nakashima A, Yoshino K, Miyamoto T, Eguchi S, Oshiro N, Kikkawa U, Yonezawa K", "reference": { "type": "PubMed", "id": "17658474", "url": "https://pubmed.ncbi.nlm.nih.gov/17658474" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IYJ3-1", "protein_name": "Synaptotagmin-like protein 1", "gene_name": "SYTL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4KMP7-1", "protein_name": "TBC1 domain family member 10B", "gene_name": "TBC1D10B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14088-1", "protein_name": "Ras-related protein Rab-33A", "gene_name": "RAB33A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95166-1", "protein_name": "Gamma-aminobutyric acid receptor-associated protein", "gene_name": "GABARAP", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15276-1", "protein_name": "Rab GTPase-binding effector protein 1", "gene_name": "RABEP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62491-1", "protein_name": "Ras-related protein Rab-11A", "gene_name": "RAB11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HA65-1", "protein_name": "TBC1 domain family member 17", "gene_name": "TBC1D17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2M4-1", "protein_name": "TBC1 domain family member 14", "gene_name": "TBC1D14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92574-1", "protein_name": "Hamartin", "gene_name": "TSC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVG8-1", "protein_name": "TBC1 domain family member 13", "gene_name": "TBC1D13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0N9-1", "protein_name": "TBC1 domain family member 7", "gene_name": "TBC1D7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJY5-1", "protein_name": "ADP-ribosylation factor-binding protein GGA1", "gene_name": "GGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96CV9-1", "protein_name": "Optineurin", "gene_name": "OPTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60520-1", "protein_name": "Gamma-aminobutyric acid receptor-associated protein-like 2", "gene_name": "GABARAPL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZQ8-1", "protein_name": "Microtubule-associated protein 1 light chain 3 beta", "gene_name": "MAP1LC3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62330-1", "protein_name": "ADP-ribosylation factor 6", "gene_name": "ARF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20338-1", "protein_name": "Ras-related protein Rab-4A", "gene_name": "RAB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZ52-1", "protein_name": "ADP-ribosylation factor-binding protein GGA3", "gene_name": "GGA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TC07-1", "protein_name": "TBC1 domain family member 15", "gene_name": "TBC1D15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJY4-1", "protein_name": "ADP-ribosylation factor-binding protein GGA2", "gene_name": "GGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15907-1", "protein_name": "Ras-related protein Rab-11B", "gene_name": "RAB11B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H082-1", "protein_name": "Ras-related protein Rab-33B", "gene_name": "RAB33B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZP1-1", "protein_name": "TBC1 domain family member 3", "gene_name": "TBC1D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBP0-1", "protein_name": "TBC1 domain family member 16", "gene_name": "TBC1D16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULP9-1", "protein_name": "TBC1 domain family member 24", "gene_name": "TBC1D24", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3MII6-1", "protein_name": "TBC1 domain family member 25", "gene_name": "TBC1D25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3P9-1", "protein_name": "Rab GTPase-activating protein 1", "gene_name": "RABGAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV04-1", "protein_name": "Carabin", "gene_name": "TBC1D10C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BYX2-1", "protein_name": "TBC1 domain family member 2A", "gene_name": "TBC1D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49815-1", "protein_name": "Tuberin", "gene_name": "TSC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXI6-1", "protein_name": "TBC1 domain family member 10A", "gene_name": "TBC1D10A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17658474", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 44 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Melanosome maturation defect in Rab38-deficient retinal pigment epithelium results in instability of immature melanosomes during transient melanogenesis.", "journal": "Molecular biology of the cell", "date": "2007", "authors": "Lopes VS, Wasmeier C, Seabra MC, Futter CE", "reference": { "type": "PubMed", "id": "17671165", "url": "https://pubmed.ncbi.nlm.nih.gov/17671165" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab 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subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17671165", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 89 } ], "sort_fields": [ 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"uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", 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domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17678623", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 90 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], 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}, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "TBC1D20 is a Rab1 GTPase-activating protein that mediates hepatitis C virus replication.", "journal": "The Journal of biological chemistry", "date": "2007", "authors": "Sklan EH, Serrano RL, Einav S, Pfeffer SR, Lambright DG, Glenn JS", "reference": { "type": "PubMed", "id": "17901050", "url": "https://pubmed.ncbi.nlm.nih.gov/17901050" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IYJ3-1", "protein_name": "Synaptotagmin-like protein 1", "gene_name": "SYTL1", "tax_name": 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}, { "uniprot_canonical_ac": "Q9UJY5-1", "protein_name": "ADP-ribosylation factor-binding protein GGA1", "gene_name": "GGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96CV9-1", "protein_name": "Optineurin", "gene_name": "OPTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60520-1", "protein_name": "Gamma-aminobutyric acid receptor-associated protein-like 2", "gene_name": "GABARAPL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZQ8-1", "protein_name": "Microtubule-associated protein 1 light chain 3 beta", "gene_name": "MAP1LC3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62330-1", "protein_name": "ADP-ribosylation factor 6", "gene_name": "ARF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": 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3", "gene_name": "TBC1D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBP0-1", "protein_name": "TBC1 domain family member 16", "gene_name": "TBC1D16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULP9-1", "protein_name": "TBC1 domain family member 24", "gene_name": "TBC1D24", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3MII6-1", "protein_name": "TBC1 domain family member 25", "gene_name": "TBC1D25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3P9-1", "protein_name": "Rab GTPase-activating protein 1", "gene_name": "RABGAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV04-1", "protein_name": "Carabin", "gene_name": "TBC1D10C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BYX2-1", "protein_name": "TBC1 domain family member 2A", "gene_name": "TBC1D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49815-1", "protein_name": "Tuberin", "gene_name": "TSC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXI6-1", "protein_name": "TBC1 domain family member 10A", "gene_name": "TBC1D10A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17901050", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": 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"uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex 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domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein 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"sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The interaction of JRAB/MICAL-L2 with Rab8 and Rab13 coordinates the assembly of tight junctions and adherens junctions.", "journal": "Molecular biology of the cell", "date": "2008", "authors": "Yamamura R, Nishimura N, Nakatsuji H, Arase S, Sasaki T", "reference": { "type": "PubMed", "id": "18094055", "url": "https://pubmed.ncbi.nlm.nih.gov/18094055" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", 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"gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": 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"uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", 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"gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55258-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "Rab8a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": 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Troglio F, Troilo A, Fukuda M, Di Fiore PP, Scita G, Confalonieri S", "reference": { "type": "PubMed", "id": "18199687", "url": "https://pubmed.ncbi.nlm.nih.gov/18199687" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IYJ3-1", "protein_name": "Synaptotagmin-like protein 1", "gene_name": "SYTL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4KMP7-1", "protein_name": "TBC1 domain family member 10B", "gene_name": "TBC1D10B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14088-1", "protein_name": "Ras-related protein Rab-33A", "gene_name": "RAB33A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95166-1", "protein_name": "Gamma-aminobutyric acid receptor-associated protein", 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"uniprot_canonical_ac": "Q92574-1", "protein_name": "Hamartin", "gene_name": "TSC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVG8-1", "protein_name": "TBC1 domain family member 13", "gene_name": "TBC1D13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0N9-1", "protein_name": "TBC1 domain family member 7", "gene_name": "TBC1D7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJY5-1", "protein_name": "ADP-ribosylation factor-binding protein GGA1", "gene_name": "GGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96CV9-1", "protein_name": "Optineurin", "gene_name": "OPTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60520-1", "protein_name": "Gamma-aminobutyric acid receptor-associated protein-like 2", "gene_name": "GABARAPL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZQ8-1", "protein_name": "Microtubule-associated protein 1 light chain 3 beta", "gene_name": "MAP1LC3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62330-1", "protein_name": "ADP-ribosylation factor 6", "gene_name": "ARF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20338-1", "protein_name": "Ras-related protein Rab-4A", "gene_name": "RAB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZ52-1", "protein_name": "ADP-ribosylation factor-binding protein GGA3", "gene_name": "GGA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TC07-1", "protein_name": "TBC1 domain family member 15", "gene_name": "TBC1D15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJY4-1", "protein_name": "ADP-ribosylation factor-binding protein GGA2", "gene_name": "GGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15907-1", "protein_name": "Ras-related protein Rab-11B", "gene_name": "RAB11B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H082-1", "protein_name": "Ras-related protein Rab-33B", "gene_name": "RAB33B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZP1-1", "protein_name": "TBC1 domain family member 3", "gene_name": "TBC1D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBP0-1", "protein_name": "TBC1 domain family member 16", "gene_name": "TBC1D16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULP9-1", "protein_name": "TBC1 domain family member 24", "gene_name": "TBC1D24", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3MII6-1", "protein_name": "TBC1 domain family member 25", "gene_name": "TBC1D25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The hominoid-specific oncogene TBC1D3 activates Ras and modulates epidermal growth factor receptor signaling and trafficking.", "journal": "The Journal of biological chemistry", "date": "2008", "authors": "Wainszelbaum MJ, Charron AJ, Kong C, Kirkpatrick DS, Srikanth P, Barbieri MA, Gygi SP, Stahl PD", "reference": { "type": "PubMed", "id": "18319245", "url": "https://pubmed.ncbi.nlm.nih.gov/18319245" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IYJ3-1", "protein_name": "Synaptotagmin-like protein 1", "gene_name": "SYTL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4KMP7-1", "protein_name": "TBC1 domain family member 10B", "gene_name": "TBC1D10B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14088-1", "protein_name": "Ras-related protein Rab-33A", "gene_name": "RAB33A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95166-1", "protein_name": "Gamma-aminobutyric acid receptor-associated protein", "gene_name": "GABARAP", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15276-1", "protein_name": "Rab GTPase-binding effector protein 1", "gene_name": "RABEP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62491-1", "protein_name": "Ras-related protein Rab-11A", "gene_name": "RAB11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HA65-1", "protein_name": "TBC1 domain family member 17", "gene_name": "TBC1D17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2M4-1", "protein_name": "TBC1 domain family member 14", "gene_name": "TBC1D14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92574-1", "protein_name": "Hamartin", "gene_name": "TSC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVG8-1", "protein_name": "TBC1 domain family member 13", "gene_name": "TBC1D13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0N9-1", "protein_name": "TBC1 domain family member 7", "gene_name": "TBC1D7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJY5-1", "protein_name": "ADP-ribosylation factor-binding protein GGA1", "gene_name": "GGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96CV9-1", "protein_name": "Optineurin", "gene_name": "OPTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60520-1", "protein_name": "Gamma-aminobutyric acid receptor-associated protein-like 2", "gene_name": "GABARAPL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZQ8-1", "protein_name": "Microtubule-associated protein 1 light chain 3 beta", "gene_name": "MAP1LC3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62330-1", "protein_name": "ADP-ribosylation factor 6", "gene_name": "ARF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20338-1", "protein_name": "Ras-related protein Rab-4A", "gene_name": "RAB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZ52-1", "protein_name": "ADP-ribosylation factor-binding protein GGA3", "gene_name": "GGA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TC07-1", "protein_name": "TBC1 domain family member 15", "gene_name": "TBC1D15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJY4-1", "protein_name": "ADP-ribosylation factor-binding protein GGA2", "gene_name": "GGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15907-1", "protein_name": "Ras-related protein Rab-11B", "gene_name": "RAB11B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H082-1", "protein_name": "Ras-related protein Rab-33B", "gene_name": "RAB33B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZP1-1", "protein_name": "TBC1 domain family member 3", "gene_name": "TBC1D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBP0-1", "protein_name": "TBC1 domain family member 16", "gene_name": "TBC1D16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULP9-1", "protein_name": "TBC1 domain family member 24", "gene_name": "TBC1D24", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3MII6-1", "protein_name": "TBC1 domain family member 25", "gene_name": "TBC1D25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3P9-1", "protein_name": "Rab GTPase-activating protein 1", "gene_name": "RABGAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV04-1", "protein_name": "Carabin", "gene_name": "TBC1D10C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", 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"protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins 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"protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18354496", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 89 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, 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"RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N2H4-1", "protein_name": "Protein SYS1 homolog", "gene_name": "SYS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H115-1", "protein_name": "Beta-soluble NSF attachment protein", "gene_name": "NAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13795-1", "protein_name": "ADP-ribosylation factor-related protein 1", "gene_name": "ARFRP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40616-1", "protein_name": "ADP-ribosylation factor-like protein 1", "gene_name": "ARL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YS6-1", "protein_name": "Ras-related protein Rab-43", "gene_name": "RAB43", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MW5-1", "protein_name": "Conserved oligomeric Golgi complex subunit 8", "gene_name": "COG8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60499-1", "protein_name": "Syntaxin-10", "gene_name": "STX10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2V7-1", "protein_name": "Conserved oligomeric Golgi complex subunit 6", "gene_name": "COG6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15836-1", "protein_name": "Vesicle-associated membrane protein 3", "gene_name": "VAMP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92805-1", "protein_name": "Golgin subfamily A member 1", "gene_name": "GOLGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43493-2", "protein_name": "Trans-Golgi network integral membrane protein 2", "gene_name": "TGOLN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75379-1", "protein_name": "Vesicle-associated membrane protein 4", "gene_name": "VAMP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VIR6-4", "protein_name": "Vacuolar protein sorting-associated protein 53 homolog", "gene_name": "VPS53", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWJ2-1", "protein_name": "GRIP and coiled-coil domain-containing protein 2", "gene_name": "GCC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43752-1", "protein_name": "Syntaxin-6", "gene_name": "STX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRA0-1", "protein_name": "N-alpha-acetyltransferase 38, NatC auxiliary subunit", "gene_name": "NAA38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N1B4-1", "protein_name": "Vacuolar protein sorting-associated protein 52 homolog", "gene_name": "VPS52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53365-1", "protein_name": "Arfaptin-2", "gene_name": "ARFIP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13439-1", "protein_name": "Golgin subfamily A member 4", "gene_name": "GOLGA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WTW3-1", "protein_name": "Conserved oligomeric Golgi complex subunit 1", "gene_name": "COG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JB2-1", "protein_name": "Conserved oligomeric Golgi complex subunit 3", "gene_name": "COG3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9E3-1", "protein_name": "Conserved oligomeric Golgi complex subunit 4", "gene_name": "COG4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P83436-1", "protein_name": "Conserved oligomeric Golgi complex subunit 7", "gene_name": "COG7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14746-1", "protein_name": "Conserved oligomeric Golgi complex subunit 2", "gene_name": "COG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UP83-2", "protein_name": "Conserved oligomeric Golgi complex subunit 5", "gene_name": "COG5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94955-1", "protein_name": "Rho-related BTB domain-containing protein 3", "gene_name": "RHOBTB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q147X3-1", "protein_name": "N-alpha-acetyltransferase 30", "gene_name": "NAA30", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZE5-1", "protein_name": "N-alpha-acetyltransferase 35, NatC auxiliary subunit", "gene_name": "NAA35", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z6M1-1", "protein_name": "Rab9 effector protein with kelch motifs", "gene_name": "RABEPK", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UIL1-1", "protein_name": "Short coiled-coil protein", "gene_name": "SCOC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P1Q0-1", "protein_name": "Vacuolar protein sorting-associated protein 54", "gene_name": "VPS54", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UID3-1", "protein_name": "Vacuolar protein sorting-associated protein 51 homolog", "gene_name": "VPS51", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ9-2", "protein_name": "Vesicle transport through interaction with t-SNAREs homolog 1A", "gene_name": "VTI1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60664-1", "protein_name": "Perilipin-3", "gene_name": "PLIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P82094-1", "protein_name": "TATA element modulatory factor", "gene_name": "TMF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11717-1", "protein_name": "Cation-independent mannose-6-phosphate receptor", "gene_name": "IGF2R", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14662-1", "protein_name": "Syntaxin-16", "gene_name": "STX16", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20645-1", "protein_name": "Cation-dependent mannose-6-phosphate receptor", "gene_name": "M6PR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92738-1", "protein_name": "USP6 N-terminal-like protein", "gene_name": "USP6NL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96CN9-1", "protein_name": "GRIP and coiled-coil domain-containing protein 1", "gene_name": "GCC1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18367545", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 132 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", 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"uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"Human" }, { "uniprot_canonical_ac": "P62330-1", "protein_name": "ADP-ribosylation factor 6", "gene_name": "ARF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20338-1", "protein_name": "Ras-related protein Rab-4A", "gene_name": "RAB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZ52-1", "protein_name": "ADP-ribosylation factor-binding protein GGA3", "gene_name": "GGA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TC07-1", "protein_name": "TBC1 domain family member 15", "gene_name": "TBC1D15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJY4-1", "protein_name": "ADP-ribosylation factor-binding protein GGA2", "gene_name": "GGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15907-1", "protein_name": "Ras-related protein Rab-11B", "gene_name": "RAB11B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H082-1", "protein_name": "Ras-related protein Rab-33B", "gene_name": "RAB33B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZP1-1", "protein_name": "TBC1 domain family member 3", "gene_name": "TBC1D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBP0-1", "protein_name": "TBC1 domain family member 16", "gene_name": "TBC1D16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULP9-1", "protein_name": "TBC1 domain family member 24", "gene_name": "TBC1D24", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3MII6-1", "protein_name": "TBC1 domain family member 25", "gene_name": "TBC1D25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3P9-1", "protein_name": "Rab GTPase-activating protein 1", "gene_name": "RABGAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV04-1", "protein_name": "Carabin", "gene_name": "TBC1D10C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BYX2-1", "protein_name": "TBC1 domain family member 2A", "gene_name": "TBC1D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49815-1", "protein_name": "Tuberin", "gene_name": "TSC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXI6-1", "protein_name": "TBC1 domain family member 10A", "gene_name": "TBC1D10A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18466115", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 44 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Varp interacts with Rab38 and functions as its potential effector.", "journal": "Biochemical and biophysical research communications", "date": "2008", "authors": "Wang F, Zhang H, Zhang X, Wang Y, Ren F, Zhang X, Zhai Y, Chang Z", "reference": { "type": "PubMed", "id": "18477474", "url": "https://pubmed.ncbi.nlm.nih.gov/18477474" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma 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and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": 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"Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18477474", "abstract": "", "glycosylation": 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"count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Rab geranylgeranylation occurs preferentially via the pre-formed REP-RGGT complex and is regulated by geranylgeranyl pyrophosphate.", "journal": "The Biochemical journal", "date": "2008", "authors": "Baron RA, Seabra MC", "reference": { "type": "PubMed", "id": 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"RAB25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q53FA7-1", "protein_name": "Quinone oxidoreductase PIG3", "gene_name": "TP53I3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96E17-1", "protein_name": "Ras-related protein Rab-3C", "gene_name": "RAB3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULC3-1", "protein_name": "Ras-related protein Rab-23", "gene_name": "RAB23", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q969Q5-1", "protein_name": "Ras-related protein Rab-24", "gene_name": "RAB24", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z6P3-1", "protein_name": "Ras-related protein Rab-44", "gene_name": "RAB44", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95716-1", "protein_name": "Ras-related protein Rab-3D", "gene_name": "RAB3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20337-1", "protein_name": "Ras-related protein Rab-3B", "gene_name": "RAB3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NX57-1", "protein_name": "Ras-related protein Rab-20", "gene_name": "RAB20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15392-1", "protein_name": "Baculoviral IAP repeat-containing protein 5", "gene_name": "BIRC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15350-1", "protein_name": "Tumor protein p73", "gene_name": "TP73", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H3D4-1", "protein_name": "Tumor protein 63", "gene_name": "TP63", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14966-1", "protein_name": "Ras-related protein Rab-29", "gene_name": "RAB29", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41182-1", "protein_name": "B-cell lymphoma 6 protein", "gene_name": "BCL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61018-1", "protein_name": "Ras-related protein Rab-4B", "gene_name": "RAB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20338-1", "protein_name": "Ras-related protein Rab-4A", "gene_name": "RAB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WUD1-1", "protein_name": "Ras-related protein Rab-2B", "gene_name": "RAB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BZG1-1", "protein_name": "Ras-related protein Rab-34", "gene_name": "RAB34", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92597-1", "protein_name": "Protein NDRG1", "gene_name": "NDRG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BZR8-1", "protein_name": "Apoptosis facilitator Bcl-2-like protein 14", "gene_name": "BCL2L14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FX8-1", "protein_name": "p53 apoptosis effector related to PMP-22", "gene_name": "PERP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15907-1", "protein_name": "Ras-related protein Rab-11B", "gene_name": "RAB11B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12829-1", "protein_name": "Ras-related protein Rab-40B", "gene_name": "RAB40B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { 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phosphatase type IVA 2", "gene_name": "PTP4A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL26-1", "protein_name": "Ras-related protein Rab-22A", "gene_name": "RAB22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61019-1", "protein_name": "Ras-related protein Rab-2A", "gene_name": "RAB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AX2-1", "protein_name": "Ras-related protein Rab-37", "gene_name": "RAB37", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13625-1", "protein_name": "Apoptosis-stimulating of p53 protein 2", "gene_name": "TP53BP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 282, "end_pos": 282, "sequence_org": "F", "sequence_mut": "L", "comment": "Abolishes prenylation of RAB1A and association with RGGT.", "evidence": [ { "database": "UniProtKB", "id": "P24386", "url": "https://www.uniprot.org/uniprotkb/P24386" }, { "database": "PubMed", "id": "18532927", "url": "https://pubmed.ncbi.nlm.nih.gov/18532927" } ], "uniprot_canonical_ac": "P24386-1" }, { "start_pos": 290, "end_pos": 290, "sequence_org": "V", "sequence_mut": "F", "comment": "Impairs prenylation of RAB1A and abolishes association with RGGT.", "evidence": [ { "database": "UniProtKB", "id": "P24386", "url": "https://www.uniprot.org/uniprotkb/P24386" }, { "database": "PubMed", "id": "18532927", "url": "https://pubmed.ncbi.nlm.nih.gov/18532927" } ], "uniprot_canonical_ac": "P24386-1" } ], "record_id": "pubmed.18532927", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 76 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Rab3GEP is the non-redundant guanine nucleotide exchange factor for Rab27a in melanocytes.", "journal": "The Journal of biological chemistry", "date": "2008", "authors": "Figueiredo AC, Wasmeier C, Tarafder AK, Ramalho JS, Baron RA, Seabra MC", "reference": { "type": "PubMed", "id": "18559336", "url": "https://pubmed.ncbi.nlm.nih.gov/18559336" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q80U28-1", "protein_name": "MAP kinase-activating death domain protein", "gene_name": "Madd", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXG6-1", "protein_name": "MAP kinase-activating death domain protein", "gene_name": "MADD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18559336", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 91 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The structural basis for activation of the Rab Ypt1p by the TRAPP membrane-tethering complexes.", "journal": "Cell", "date": "2008", "authors": "Cai Y, Chin HF, Lazarova D, Menon S, Fu C, Cai H, Sclafani A, Rodgers DW, De La Cruz EM, Ferro-Novick S, Reinisch KM", "reference": { "type": "PubMed", "id": "18585354", "url": "https://pubmed.ncbi.nlm.nih.gov/18585354" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01123-1", "protein_name": "GTP-binding protein YPT1", "gene_name": "YPT1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18585354", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 90 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Rab18 and Rab43 have key roles in ER-Golgi trafficking.", "journal": "Journal of cell science", "date": "2008", "authors": "Dejgaard SY, Murshid A, Erman A, Kizilay O, Verbich D, Lodge R, Dejgaard K, Ly-Hartig TB, Pepperkok R, Simpson JC, Presley JF", "reference": { "type": "PubMed", "id": "18664496", "url": "https://pubmed.ncbi.nlm.nih.gov/18664496" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N2H4-1", "protein_name": "Protein SYS1 homolog", "gene_name": "SYS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H115-1", "protein_name": "Beta-soluble NSF attachment protein", "gene_name": "NAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14203-1", "protein_name": "Dynactin subunit 1", "gene_name": "DCTN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13795-1", "protein_name": "ADP-ribosylation factor-related protein 1", "gene_name": "ARFRP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40616-1", "protein_name": "ADP-ribosylation factor-like protein 1", "gene_name": "ARL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZ32-1", "protein_name": "Actin-related protein 10", "gene_name": "ACTR10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PEY2-1", "protein_name": "Tubulin alpha-3E chain", "gene_name": "TUBA3E", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00399-1", "protein_name": "Dynactin subunit 6", "gene_name": "DCTN6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YS6-1", "protein_name": "Ras-related protein Rab-43", "gene_name": "RAB43", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MW5-1", "protein_name": "Conserved oligomeric Golgi complex subunit 8", "gene_name": "COG8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43034-1", "protein_name": "Platelet-activating factor acetylhydrolase IB subunit beta", "gene_name": "PAFAH1B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68402-1", "protein_name": "Platelet-activating factor acetylhydrolase IB subunit alpha2", "gene_name": "PAFAH1B2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRZ7-1", "protein_name": "1-acyl-sn-glycerol-3-phosphate acyltransferase gamma", "gene_name": "AGPAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60499-1", "protein_name": "Syntaxin-10", "gene_name": "STX10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2V7-1", "protein_name": "Conserved oligomeric Golgi complex subunit 6", "gene_name": "COG6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15836-1", "protein_name": "Vesicle-associated membrane protein 3", "gene_name": "VAMP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92805-1", "protein_name": "Golgin subfamily A member 1", "gene_name": "GOLGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P47756-2", "protein_name": "F-actin-capping protein subunit beta", "gene_name": "CAPZB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P47755-1", "protein_name": "F-actin-capping protein subunit alpha-2", "gene_name": "CAPZA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52907-1", "protein_name": "F-actin-capping protein subunit alpha-1", "gene_name": "CAPZA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13409-1", "protein_name": "Cytoplasmic dynein 1 intermediate chain 2", "gene_name": "DYNC1I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14576-1", "protein_name": "Cytoplasmic dynein 1 intermediate chain 1", "gene_name": "DYNC1I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6G9-1", "protein_name": "Cytoplasmic dynein 1 light intermediate chain 1", "gene_name": "DYNC1LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15102-1", "protein_name": "Platelet-activating factor acetylhydrolase IB subunit alpha1", "gene_name": "PAFAH1B3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43493-2", "protein_name": "Trans-Golgi network integral membrane protein 2", "gene_name": "TGOLN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75379-1", "protein_name": "Vesicle-associated membrane protein 4", "gene_name": "VAMP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NNZ2-1", "protein_name": "Tubulin beta 8B", "gene_name": "TUBB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3ZCM7-1", "protein_name": "Tubulin beta-8 chain", "gene_name": "TUBB8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VIR6-4", "protein_name": "Vacuolar protein sorting-associated protein 53 homolog", "gene_name": "VPS53", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWJ2-1", "protein_name": "GRIP and coiled-coil domain-containing protein 2", "gene_name": "GCC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q10472-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 1", "gene_name": "GALNT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43752-1", "protein_name": "Syntaxin-6", "gene_name": "STX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q10471-1", "protein_name": "Polypeptide N-acetylgalactosaminyltransferase 2", "gene_name": "GALNT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRA0-1", "protein_name": "N-alpha-acetyltransferase 38, NatC auxiliary subunit", "gene_name": "NAA38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P47712-1", "protein_name": "Cytosolic phospholipase A2", "gene_name": "PLA2G4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N1B4-1", "protein_name": "Vacuolar protein sorting-associated protein 52 homolog", "gene_name": "VPS52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61163-1", "protein_name": "Alpha-centractin", "gene_name": "ACTR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53365-1", "protein_name": "Arfaptin-2", "gene_name": "ARFIP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13439-1", "protein_name": "Golgin subfamily A member 4", "gene_name": "GOLGA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WTW3-1", "protein_name": "Conserved oligomeric Golgi complex subunit 1", "gene_name": "COG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JB2-1", "protein_name": "Conserved oligomeric Golgi complex subunit 3", "gene_name": "COG3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9E3-1", "protein_name": "Conserved oligomeric Golgi complex subunit 4", "gene_name": "COG4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P83436-1", "protein_name": "Conserved oligomeric Golgi complex subunit 7", "gene_name": "COG7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14746-1", "protein_name": "Conserved oligomeric Golgi complex subunit 2", "gene_name": "COG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UP83-2", "protein_name": "Conserved oligomeric Golgi complex subunit 5", "gene_name": "COG5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96G01-1", "protein_name": "Protein bicaudal D homolog 1", "gene_name": "BICD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94955-1", "protein_name": "Rho-related BTB domain-containing protein 3", "gene_name": "RHOBTB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TD16-1", "protein_name": "Protein bicaudal D homolog 2", "gene_name": "BICD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13561-1", "protein_name": "Dynactin subunit 2", "gene_name": "DCTN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJW0-1", "protein_name": "Dynactin subunit 4", "gene_name": "DCTN4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTE1-1", "protein_name": "Dynactin subunit 5", "gene_name": "DCTN5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q147X3-1", "protein_name": "N-alpha-acetyltransferase 30", "gene_name": "NAA30", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZE5-1", "protein_name": "N-alpha-acetyltransferase 35, NatC auxiliary subunit", "gene_name": "NAA35", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60733-1", "protein_name": "85/88 kDa calcium-independent phospholipase A2", "gene_name": "PLA2G6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z6M1-1", "protein_name": "Rab9 effector protein with kelch motifs", "gene_name": "RABEPK", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UIL1-1", "protein_name": "Short coiled-coil protein", "gene_name": "SCOC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H853-1", "protein_name": "Tubulin-like protein alpha-4B", "gene_name": "TUBA4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P1Q0-1", "protein_name": "Vacuolar protein sorting-associated protein 54", "gene_name": "VPS54", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UID3-1", "protein_name": "Vacuolar protein sorting-associated protein 51 homolog", "gene_name": "VPS51", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ9-2", "protein_name": "Vesicle transport through interaction with t-SNAREs homolog 1A", "gene_name": "VTI1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KX2-1", "protein_name": "F-actin-capping protein subunit alpha-3", "gene_name": "CAPZA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60664-1", "protein_name": "Perilipin-3", "gene_name": "PLIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75935-1", "protein_name": "Dynactin subunit 3", "gene_name": "DCTN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43237-1", "protein_name": "Cytoplasmic dynein 1 light intermediate chain 2", "gene_name": "DYNC1LI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14204-1", "protein_name": "Cytoplasmic dynein 1 heavy chain 1", "gene_name": "DYNC1H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P82094-1", "protein_name": "TATA element modulatory factor", "gene_name": "TMF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11717-1", "protein_name": "Cation-independent mannose-6-phosphate receptor", "gene_name": "IGF2R", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14662-1", "protein_name": "Syntaxin-16", "gene_name": "STX16", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20645-1", "protein_name": "Cation-dependent mannose-6-phosphate receptor", "gene_name": "M6PR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NHL2-1", "protein_name": "Tubulin alpha chain-like 3", "gene_name": "TUBAL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY65-1", "protein_name": "Tubulin alpha-8 chain", "gene_name": "TUBA8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92738-1", "protein_name": "USP6 N-terminal-like protein", "gene_name": "USP6NL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96CN9-1", "protein_name": "GRIP and coiled-coil domain-containing protein 1", "gene_name": "GCC1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 32, "end_pos": 32, "sequence_org": "T", "sequence_mut": "N", "comment": "Constitutively inactive (GDP-bound) mutant. Disruption of Golgi structure. Localized to the cytoplasm. Loss of interaction with ADRA2B. 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"tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05556-1", "protein_name": "Integrin beta-1", "gene_name": "ITGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09055-1", "protein_name": "Integrin beta-1", "gene_name": "Itgb1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17301-1", "protein_name": "Integrin alpha-2", "gene_name": "ITGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 783, "end_pos": 783, "sequence_org": "Y", "sequence_mut": "F", "comment": "Reduced endocytosis; when associated with F-795.", "evidence": [ { "database": "UniProtKB", "id": "P09055", "url": "https://www.uniprot.org/uniprotkb/P09055" }, { "database": "PubMed", "id": "18804435", "url": "https://pubmed.ncbi.nlm.nih.gov/18804435" } ], "uniprot_canonical_ac": "P09055-1" }, { "start_pos": 795, "end_pos": 795, "sequence_org": "Y", "sequence_mut": "F", "comment": "Reduced endocytosis; when associated with F-783.", "evidence": [ { "database": "UniProtKB", "id": "P09055", "url": "https://www.uniprot.org/uniprotkb/P09055" }, { "database": "PubMed", "id": "18804435", "url": "https://pubmed.ncbi.nlm.nih.gov/18804435" } ], "uniprot_canonical_ac": "P09055-1" }, { "start_pos": 1160, "end_pos": 1160, "sequence_org": "K", "sequence_mut": "A", "comment": "No effect on RAB21-binding. Significant reduction of RAB21-binding; when associated with A-1161. Shows defective cytokinesis on collagen, but not on fibronectin; when associated with A-1161.", "evidence": [ { "database": "UniProtKB", "id": "P17301", "url": "https://www.uniprot.org/uniprotkb/P17301" }, { "database": "PubMed", "id": "16754960", "url": "https://pubmed.ncbi.nlm.nih.gov/16754960" }, { "database": "PubMed", "id": "18804435", "url": "https://pubmed.ncbi.nlm.nih.gov/18804435" } ], "uniprot_canonical_ac": "P17301-1" }, { "start_pos": 1161, "end_pos": 1161, "sequence_org": "R", "sequence_mut": "A", "comment": "Significant reduction of RAB21-binding; when associated with A-1160. Shows defective cytokinesis on collagen, but not on fibronectin; when associated with A-1160.", "evidence": [ { "database": "UniProtKB", "id": "P17301", "url": "https://www.uniprot.org/uniprotkb/P17301" }, { "database": "PubMed", "id": "16754960", "url": "https://pubmed.ncbi.nlm.nih.gov/16754960" }, { "database": "PubMed", "id": "18804435", "url": "https://pubmed.ncbi.nlm.nih.gov/18804435" } ], "uniprot_canonical_ac": "P17301-1" }, { "start_pos": 1162, "end_pos": 1162, "sequence_org": "K", "sequence_mut": "A", "comment": "No significant reduction of RAB21-binding by co-immunoprecipitation assay; when associated with A-1159 and A-1160.", "evidence": [ { "database": "UniProtKB", "id": "P17301", "url": "https://www.uniprot.org/uniprotkb/P17301" }, { "database": "PubMed", "id": "16754960", "url": "https://pubmed.ncbi.nlm.nih.gov/16754960" }, { "database": "PubMed", "id": "18804435", "url": "https://pubmed.ncbi.nlm.nih.gov/18804435" } ], "uniprot_canonical_ac": "P17301-1" }, { "start_pos": 1162, "end_pos": 1162, "sequence_org": "K", "sequence_mut": "P", "comment": "Markedly weakens RAB21-binding. Shows defective cytokinesis on collagen, but not on fibronectin.", "evidence": [ { "database": "UniProtKB", "id": "P17301", "url": "https://www.uniprot.org/uniprotkb/P17301" }, { "database": "PubMed", "id": "16754960", "url": "https://pubmed.ncbi.nlm.nih.gov/16754960" }, { "database": "PubMed", "id": "18804435", "url": "https://pubmed.ncbi.nlm.nih.gov/18804435" } ], "uniprot_canonical_ac": "P17301-1" } ], "record_id": "pubmed.18804435", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 93 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "rab5 controls early endosome fusion in vitro.", "journal": "Cell", "date": "1991", "authors": "Gorvel JP, Chavrier P, Zerial M, Gruenberg J", "reference": { "type": "PubMed", "id": "1900457", "url": "https://pubmed.ncbi.nlm.nih.gov/1900457" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.1900457", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 89 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Tracing the retrograde route in protein trafficking.", "journal": "Cell", "date": "2008", "authors": "Johannes L, Popoff V", "reference": { "type": "PubMed", "id": "19109890", "url": "https://pubmed.ncbi.nlm.nih.gov/19109890" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19109890", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 89 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Transport of mannose-6-phosphate receptors from the trans-Golgi network to endosomes requires Rab31.", "journal": "Experimental cell research", "date": "2009", "authors": "Rodriguez-Gabin AG, Yin X, Si Q, Larocca JN", "reference": { "type": "PubMed", "id": "19345684", "url": "https://pubmed.ncbi.nlm.nih.gov/19345684" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6GQP4-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "Rab31", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q921E2-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "Rab31", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19345684", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 91 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Varp is a novel Rab32/38-binding protein that regulates Tyrp1 trafficking in melanocytes.", "journal": "Molecular biology of the cell", "date": "2009", "authors": "Tamura K, Ohbayashi N, Maruta Y, Kanno E, Itoh T, Fukuda M", "reference": { "type": "PubMed", "id": "19403694", "url": "https://pubmed.ncbi.nlm.nih.gov/19403694" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9CZE3-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "Rab32", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3UMR0-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "Ankrd27", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19403694", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 91 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "RhoBTB3: a Rho GTPase-family ATPase required for endosome to Golgi transport.", "journal": "Cell", "date": "2009", "authors": "Espinosa EJ, Calero M, Sridevi K, Pfeffer SR", "reference": { "type": "PubMed", "id": "19490898", "url": "https://pubmed.ncbi.nlm.nih.gov/19490898" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor 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"O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MW5-1", "protein_name": "Conserved oligomeric Golgi complex subunit 8", "gene_name": "COG8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", 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"Q9Y2V7-1", "protein_name": "Conserved oligomeric Golgi complex subunit 6", "gene_name": "COG6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15836-1", "protein_name": "Vesicle-associated membrane protein 3", "gene_name": "VAMP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92805-1", "protein_name": "Golgin subfamily A member 1", "gene_name": "GOLGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43493-2", "protein_name": "Trans-Golgi network integral membrane protein 2", "gene_name": "TGOLN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75379-1", "protein_name": "Vesicle-associated membrane protein 4", "gene_name": "VAMP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VIR6-4", "protein_name": "Vacuolar protein sorting-associated protein 53 homolog", "gene_name": "VPS53", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing 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"GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94955-1", "protein_name": "Rho-related BTB domain-containing protein 3", "gene_name": "RHOBTB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24864-1", "protein_name": "G1/S-specific cyclin-E1", "gene_name": "CCNE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q147X3-1", "protein_name": "N-alpha-acetyltransferase 30", "gene_name": "NAA30", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZE5-1", "protein_name": "N-alpha-acetyltransferase 35, NatC auxiliary subunit", "gene_name": "NAA35", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z6M1-1", "protein_name": "Rab9 effector protein with kelch motifs", "gene_name": "RABEPK", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UIL1-1", "protein_name": "Short coiled-coil protein", "gene_name": "SCOC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P1Q0-1", "protein_name": "Vacuolar protein sorting-associated protein 54", "gene_name": "VPS54", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UID3-1", "protein_name": "Vacuolar protein sorting-associated protein 51 homolog", "gene_name": "VPS51", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ9-2", "protein_name": "Vesicle transport through interaction with t-SNAREs homolog 1A", "gene_name": "VTI1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", 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"P83436-1", "protein_name": "Conserved oligomeric Golgi complex subunit 7", "gene_name": "COG7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14746-1", "protein_name": "Conserved oligomeric Golgi complex subunit 2", "gene_name": "COG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UP83-2", "protein_name": "Conserved oligomeric Golgi complex subunit 5", "gene_name": "COG5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94955-1", "protein_name": "Rho-related BTB domain-containing protein 3", "gene_name": "RHOBTB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q147X3-1", "protein_name": "N-alpha-acetyltransferase 30", "gene_name": "NAA30", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZE5-1", "protein_name": "N-alpha-acetyltransferase 35, NatC auxiliary subunit", "gene_name": "NAA35", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z6M1-1", "protein_name": "Rab9 effector protein with kelch motifs", "gene_name": "RABEPK", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UIL1-1", "protein_name": "Short coiled-coil protein", "gene_name": "SCOC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P1Q0-1", "protein_name": "Vacuolar protein sorting-associated protein 54", "gene_name": "VPS54", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UID3-1", "protein_name": "Vacuolar protein sorting-associated protein 51 homolog", "gene_name": "VPS51", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ9-2", "protein_name": "Vesicle transport through interaction with t-SNAREs homolog 1A", "gene_name": "VTI1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60664-1", "protein_name": "Perilipin-3", "gene_name": "PLIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P82094-1", "protein_name": "TATA element modulatory factor", "gene_name": "TMF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11717-1", "protein_name": "Cation-independent mannose-6-phosphate receptor", "gene_name": "IGF2R", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14662-1", "protein_name": "Syntaxin-16", "gene_name": "STX16", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20645-1", "protein_name": "Cation-dependent mannose-6-phosphate receptor", "gene_name": "M6PR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92738-1", "protein_name": "USP6 N-terminal-like protein", "gene_name": "USP6NL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96CN9-1", "protein_name": "GRIP and coiled-coil domain-containing protein 1", "gene_name": "GCC1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19620288", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 132 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "mTrs130 is a component of a mammalian TRAPPII complex, a Rab1 GEF that binds to COPI-coated vesicles.", "journal": "Molecular biology of the cell", "date": "2009", "authors": "Yamasaki A, Menon S, Yu S, Barrowman J, Meerloo T, Oorschot V, Klumperman J, Satoh A, Ferro-Novick S", "reference": { "type": "PubMed", "id": "19656848", "url": "https://pubmed.ncbi.nlm.nih.gov/19656848" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15498-1", "protein_name": "Synaptobrevin homolog YKT6", "gene_name": "YKT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQW1-1", "protein_name": "Protein transport protein Sec31B", "gene_name": "SEC31B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00743-1", "protein_name": "Serine/threonine-protein phosphatase 6 catalytic subunit", "gene_name": "PPP6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9R7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 3", "gene_name": "PPP6R3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H115-1", "protein_name": "Beta-soluble NSF attachment protein", "gene_name": "NAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15514-1", "protein_name": "Amphiregulin", "gene_name": "AREG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49257-1", "protein_name": "Protein ERGIC-53", "gene_name": "LMAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42261-1", "protein_name": "Glutamate receptor 1", "gene_name": "GRIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR2-1", "protein_name": "Cathepsin Z", "gene_name": "CTSZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95406-1", "protein_name": "Protein cornichon homolog 1", "gene_name": "CNIH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", "protein_name": "Protein SEC13 homolog", "gene_name": "SEC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75396-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "SEC22B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JE7-1", "protein_name": "Protein transport protein Sec16B", "gene_name": "SEC16B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95487-1", "protein_name": "Protein transport protein Sec24B", "gene_name": "SEC24B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56962-1", "protein_name": "Syntaxin-17", "gene_name": "STX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing protein 10", "gene_name": "TMED10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3TLI0-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "Trappc10", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O14653-1", "protein_name": "Golgi SNAP receptor complex member 2", "gene_name": "GOSR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19656848", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 147 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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"n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Rab35 controls actin bundling by recruiting fascin as an effector protein.", "journal": "Science (New York, N.Y.)", "date": "2009", "authors": "Zhang J, Fonovic M, Suyama K, Bogyo M, Scott MP", "reference": { "type": "PubMed", "id": "19729655", "url": "https://pubmed.ncbi.nlm.nih.gov/19729655" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q24524-1", "protein_name": "Protein singed", "gene_name": "sn", "tax_name": "Fruit fly" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19729655", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 90 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Role of Varp, a Rab21 exchange factor and TI-VAMP/VAMP7 partner, in neurite growth.", "journal": "EMBO reports", "date": "2009", "authors": "Burgo A, Sotirakis E, Simmler MC, Verraes A, Chamot C, Simpson JC, Lanzetti L, Proux-Gillardeaux V, Galli T", "reference": { "type": "PubMed", "id": "19745841", "url": "https://pubmed.ncbi.nlm.nih.gov/19745841" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35282-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "Rab21", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6AXT5-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "Rab21", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q3UMR0-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "Ankrd27", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19745841", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 92 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Rab13 regulates neurite outgrowth in PC12 cells through its effector protein, JRAB/MICAL-L2.", "journal": "Molecular and cellular biology", "date": "2010", "authors": "Sakane A, Honda K, Sasaki T", "reference": { "type": "PubMed", "id": "20008558", "url": "https://pubmed.ncbi.nlm.nih.gov/20008558" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35286-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "Rab13", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab 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"Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "D3ZEN0-1", "protein_name": "MICAL-like protein 2", "gene_name": "Micall2", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20008558", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 92 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { 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}, { "uniprot_canonical_ac": "Q4KMP7-1", "protein_name": "TBC1 domain family member 10B", "gene_name": "TBC1D10B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14088-1", "protein_name": "Ras-related protein Rab-33A", "gene_name": "RAB33A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95166-1", "protein_name": "Gamma-aminobutyric acid receptor-associated protein", "gene_name": "GABARAP", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15276-1", "protein_name": "Rab GTPase-binding effector protein 1", "gene_name": "RABEP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62491-1", "protein_name": "Ras-related protein Rab-11A", "gene_name": "RAB11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HA65-1", "protein_name": "TBC1 domain family member 17", "gene_name": "TBC1D17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2M4-1", "protein_name": "TBC1 domain family member 14", "gene_name": "TBC1D14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92574-1", "protein_name": "Hamartin", "gene_name": "TSC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVG8-1", "protein_name": "TBC1 domain family member 13", "gene_name": "TBC1D13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0N9-1", "protein_name": "TBC1 domain family member 7", "gene_name": "TBC1D7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJY5-1", "protein_name": "ADP-ribosylation factor-binding protein GGA1", "gene_name": "GGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96CV9-1", "protein_name": "Optineurin", "gene_name": "OPTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60520-1", "protein_name": "Gamma-aminobutyric acid receptor-associated protein-like 2", "gene_name": "GABARAPL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZQ8-1", "protein_name": "Microtubule-associated protein 1 light chain 3 beta", "gene_name": "MAP1LC3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62330-1", "protein_name": "ADP-ribosylation factor 6", "gene_name": "ARF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20338-1", "protein_name": "Ras-related protein Rab-4A", "gene_name": "RAB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZ52-1", "protein_name": "ADP-ribosylation factor-binding protein GGA3", "gene_name": "GGA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TC07-1", "protein_name": "TBC1 domain family member 15", "gene_name": "TBC1D15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJY4-1", "protein_name": "ADP-ribosylation factor-binding protein GGA2", "gene_name": "GGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15907-1", "protein_name": "Ras-related protein Rab-11B", "gene_name": "RAB11B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H082-1", "protein_name": "Ras-related protein Rab-33B", "gene_name": "RAB33B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZP1-1", "protein_name": "TBC1 domain family member 3", "gene_name": "TBC1D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBP0-1", "protein_name": "TBC1 domain family member 16", "gene_name": "TBC1D16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULP9-1", "protein_name": "TBC1 domain family member 24", "gene_name": "TBC1D24", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3MII6-1", "protein_name": "TBC1 domain family member 25", "gene_name": "TBC1D25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3P9-1", "protein_name": "Rab GTPase-activating protein 1", "gene_name": "RABGAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV04-1", "protein_name": "Carabin", "gene_name": "TBC1D10C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BYX2-1", "protein_name": "TBC1 domain family member 2A", "gene_name": "TBC1D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49815-1", "protein_name": "Tuberin", "gene_name": "TSC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXI6-1", "protein_name": "TBC1 domain family member 10A", "gene_name": "TBC1D10A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20095038", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": 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"P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVG8-1", "protein_name": "TBC1 domain family member 13", "gene_name": "TBC1D13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0N9-1", "protein_name": "TBC1 domain family member 7", "gene_name": "TBC1D7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJY5-1", "protein_name": "ADP-ribosylation factor-binding protein GGA1", "gene_name": "GGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96CV9-1", "protein_name": "Optineurin", "gene_name": "OPTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60520-1", "protein_name": "Gamma-aminobutyric acid receptor-associated protein-like 2", "gene_name": "GABARAPL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZQ8-1", "protein_name": "Microtubule-associated protein 1 light chain 3 beta", "gene_name": "MAP1LC3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62330-1", "protein_name": "ADP-ribosylation factor 6", "gene_name": "ARF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63000-1", "protein_name": "Ras-related C3 botulinum toxin substrate 1", "gene_name": "RAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20338-1", "protein_name": "Ras-related protein Rab-4A", "gene_name": "RAB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZ52-1", "protein_name": "ADP-ribosylation factor-binding protein GGA3", "gene_name": "GGA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TC07-1", "protein_name": "TBC1 domain family member 15", "gene_name": "TBC1D15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJY4-1", "protein_name": "ADP-ribosylation factor-binding protein GGA2", "gene_name": "GGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12830-1", "protein_name": "Cadherin-1", "gene_name": "CDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15907-1", "protein_name": "Ras-related protein Rab-11B", "gene_name": "RAB11B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H082-1", "protein_name": "Ras-related protein Rab-33B", "gene_name": "RAB33B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZP1-1", "protein_name": "TBC1 domain family member 3", "gene_name": "TBC1D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBP0-1", "protein_name": "TBC1 domain family member 16", "gene_name": "TBC1D16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULP9-1", "protein_name": "TBC1 domain family member 24", "gene_name": "TBC1D24", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3MII6-1", "protein_name": "TBC1 domain family member 25", "gene_name": "TBC1D25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3P9-1", "protein_name": "Rab GTPase-activating protein 1", "gene_name": "RABGAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV04-1", "protein_name": "Carabin", "gene_name": "TBC1D10C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BYX2-1", "protein_name": "TBC1 domain family member 2A", "gene_name": "TBC1D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49815-1", "protein_name": "Tuberin", "gene_name": "TSC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXI6-1", "protein_name": "TBC1 domain family member 10A", "gene_name": "TBC1D10A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20116244", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 46 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The connecdenn family, Rab35 guanine nucleotide exchange factors interfacing with the clathrin machinery.", "journal": "The Journal of biological chemistry", "date": "2010", "authors": "Marat AL, McPherson PS", "reference": { "type": "PubMed", "id": "20154091", "url": "https://pubmed.ncbi.nlm.nih.gov/20154091" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49951-1", "protein_name": "Clathrin heavy chain 1", "gene_name": "CLTC", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "P17427-1", "protein_name": "AP-2 complex subunit alpha-2", "gene_name": "Ap2a2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63010-1", "protein_name": "AP-2 complex subunit beta", "gene_name": "AP2B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 782, "end_pos": 782, "sequence_org": "Q", "sequence_mut": "A", "comment": "Reduces DENND1A- and DENND1C-binding.", "evidence": [ { "database": "UniProtKB", "id": "P17427", "url": "https://www.uniprot.org/uniprotkb/P17427" }, { "database": "PubMed", "id": "20154091", "url": "https://pubmed.ncbi.nlm.nih.gov/20154091" } ], "uniprot_canonical_ac": 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Greatly reduces DENND1B-binding.", "evidence": [ { "database": "UniProtKB", "id": "P63010", "url": "https://www.uniprot.org/uniprotkb/P63010" }, { "database": "PubMed", "id": "16903783", "url": "https://pubmed.ncbi.nlm.nih.gov/16903783" }, { "database": "PubMed", "id": "16516836", "url": "https://pubmed.ncbi.nlm.nih.gov/16516836" }, { "database": "PubMed", "id": "15728179", "url": "https://pubmed.ncbi.nlm.nih.gov/15728179" }, { "database": "PubMed", "id": "20154091", "url": "https://pubmed.ncbi.nlm.nih.gov/20154091" } ], "uniprot_canonical_ac": "P63010-1" }, { "start_pos": 849, "end_pos": 849, "sequence_org": "E", "sequence_mut": "A", "comment": "Strongly reduces interaction with LDLRAP1, ARRB1 and EPN1. No effect on DENND1B-binding.", "evidence": [ { "database": "UniProtKB", "id": "P63010", "url": "https://www.uniprot.org/uniprotkb/P63010" }, { "database": "PubMed", "id": "16516836", "url": "https://pubmed.ncbi.nlm.nih.gov/16516836" }, { "database": "PubMed", "id": "11777907", "url": "https://pubmed.ncbi.nlm.nih.gov/11777907" }, { "database": "PubMed", "id": "20154091", "url": "https://pubmed.ncbi.nlm.nih.gov/20154091" } ], "uniprot_canonical_ac": "P63010-1" }, { "start_pos": 888, "end_pos": 888, "sequence_org": "Y", "sequence_mut": "V", "comment": "Strongly reduces interaction with SNAP91, EPN1 and clathrin. No effect on EPS15 binding. Abolishes interaction with ARRB1 and with DENND1B.", "evidence": [ { "database": "UniProtKB", "id": "P63010", "url": "https://www.uniprot.org/uniprotkb/P63010" }, { "database": "PubMed", "id": "16903783", "url": "https://pubmed.ncbi.nlm.nih.gov/16903783" }, { "database": "PubMed", "id": "10944104", "url": "https://pubmed.ncbi.nlm.nih.gov/10944104" }, { "database": "PubMed", "id": "16516836", "url": "https://pubmed.ncbi.nlm.nih.gov/16516836" }, { "database": "PubMed", "id": "15728179", "url": "https://pubmed.ncbi.nlm.nih.gov/15728179" }, { "database": "PubMed", "id": "20154091", "url": "https://pubmed.ncbi.nlm.nih.gov/20154091" } ], "uniprot_canonical_ac": "P63010-1" }, { "start_pos": 902, "end_pos": 902, "sequence_org": "E", "sequence_mut": "A", "comment": "Strongly reduces interaction with LDLRAP1 and ARRB1. No effect on DENND1B-binding.", "evidence": [ { "database": "UniProtKB", "id": "P63010", "url": "https://www.uniprot.org/uniprotkb/P63010" }, { "database": "PubMed", "id": "16516836", "url": "https://pubmed.ncbi.nlm.nih.gov/16516836" }, { "database": "PubMed", "id": "11777907", "url": "https://pubmed.ncbi.nlm.nih.gov/11777907" }, { "database": "PubMed", "id": "20154091", "url": "https://pubmed.ncbi.nlm.nih.gov/20154091" } ], "uniprot_canonical_ac": "P63010-1" }, { "start_pos": 489, "end_pos": 489, "sequence_org": "K", "sequence_mut": "A", "comment": "Causes only a slight reduction in AP2B1-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q6P3S1", "url": "https://www.uniprot.org/uniprotkb/Q6P3S1" }, { "database": "PubMed", "id": "20154091", "url": "https://pubmed.ncbi.nlm.nih.gov/20154091" } ], "uniprot_canonical_ac": "Q6P3S1-1" }, { "start_pos": 500, "end_pos": 500, "sequence_org": "K", "sequence_mut": "A", "comment": "Greatly reduces AP2B1-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q6P3S1", "url": "https://www.uniprot.org/uniprotkb/Q6P3S1" }, { "database": "PubMed", "id": "20154091", "url": "https://pubmed.ncbi.nlm.nih.gov/20154091" } ], "uniprot_canonical_ac": "Q6P3S1-1" }, { "start_pos": 501, "end_pos": 501, "sequence_org": "R", "sequence_mut": "A", "comment": "No effect.", "evidence": [ { "database": "UniProtKB", "id": "Q6P3S1", "url": "https://www.uniprot.org/uniprotkb/Q6P3S1" }, { "database": "PubMed", "id": "20154091", "url": "https://pubmed.ncbi.nlm.nih.gov/20154091" } ], "uniprot_canonical_ac": "Q6P3S1-1" }, { "start_pos": 502, "end_pos": 502, "sequence_org": "K", "sequence_mut": "A", "comment": "Almost completely abolishes AP2B1-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q6P3S1", "url": "https://www.uniprot.org/uniprotkb/Q6P3S1" }, { "database": "PubMed", "id": "20154091", "url": "https://pubmed.ncbi.nlm.nih.gov/20154091" } ], "uniprot_canonical_ac": "Q6P3S1-1" }, { "start_pos": 507, "end_pos": 507, "sequence_org": "R", "sequence_mut": "A", "comment": "No effect.", "evidence": [ { "database": "UniProtKB", "id": "Q6P3S1", "url": "https://www.uniprot.org/uniprotkb/Q6P3S1" }, { "database": "PubMed", "id": "20154091", "url": "https://pubmed.ncbi.nlm.nih.gov/20154091" } ], "uniprot_canonical_ac": "Q6P3S1-1" }, { "start_pos": 509, "end_pos": 509, "sequence_org": "K", "sequence_mut": "A", "comment": "Greatly reduces AP2B1-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q6P3S1", "url": "https://www.uniprot.org/uniprotkb/Q6P3S1" }, { "database": "PubMed", "id": "20154091", "url": "https://pubmed.ncbi.nlm.nih.gov/20154091" } ], "uniprot_canonical_ac": "Q6P3S1-1" } ], "record_id": "pubmed.20154091", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 92 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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"url": "https://pubmed.ncbi.nlm.nih.gov/20159109" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", 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"uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8BHC1-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "Rab39b", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20159109", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 90 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Connecdenn DENN domain: a GEF for Rab35 mediating cargo-specific exit from early endosomes.", "journal": "Molecular cell", "date": "2010", "authors": "Allaire PD, Marat AL, Dall'Armi C, Di Paolo G, McPherson PS, Ritter B", "reference": { "type": "PubMed", "id": "20159556", "url": "https://pubmed.ncbi.nlm.nih.gov/20159556" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8K382-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "Dennd1a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PHN9-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "Rab35", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of two evolutionarily conserved genes regulating processing of engulfed apoptotic cells.", "journal": "Nature", "date": "2010", "authors": "Kinchen JM, Ravichandran KS", "reference": { "type": "PubMed", "id": "20305638", "url": "https://pubmed.ncbi.nlm.nih.gov/20305638" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", 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"uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20305638", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 92 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Coordination of Rab8 and Rab11 in primary ciliogenesis.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2010", "authors": "Knodler A, Feng S, Zhang J, Zhang X, Das A, Peranen J, Guo W", "reference": { "type": "PubMed", "id": "20308558", "url": "https://pubmed.ncbi.nlm.nih.gov/20308558" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SQ7-1", "protein_name": "Serologically defined colon cancer antigen 8", "gene_name": "SDCCAG8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TAP6-1", "protein_name": "Centrosomal protein of 76 kDa", "gene_name": "CEP76", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51955-1", "protein_name": "Serine/threonine-protein kinase Nek2", "gene_name": "NEK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15154-1", "protein_name": "Pericentriolar material 1 protein", "gene_name": "PCM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULH1-1", "protein_name": "Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1", "gene_name": "ASAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00471-1", "protein_name": "Exocyst complex component 5", "gene_name": "EXOC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5BJF6-1", "protein_name": "Outer dense fiber protein 2", "gene_name": "ODF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14008-1", "protein_name": "Cytoskeleton-associated protein 5", "gene_name": "CKAP5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96GX1-1", "protein_name": "Tectonic-2", "gene_name": "TCTN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95684-1", "protein_name": "Centrosomal protein 43", "gene_name": "CEP43", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEP8-3", "protein_name": "Centrosomal protein of 192 kDa", "gene_name": "CEP192", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KP1-1", "protein_name": "Exocyst complex component 2", "gene_name": "EXOC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13563-1", "protein_name": "Polycystin-2", "gene_name": "PKD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62491-1", "protein_name": "Ras-related protein Rab-11A", "gene_name": "RAB11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV77-1", "protein_name": "Cyclic nucleotide-gated channel alpha-4", "gene_name": "CNGA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BV73-1", "protein_name": "Centrosome-associated protein CEP250", "gene_name": "CEP250", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43034-1", "protein_name": "Platelet-activating factor acetylhydrolase IB subunit beta", "gene_name": "PAFAH1B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08100-1", "protein_name": "Rhodopsin", "gene_name": "RHO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ55-1", "protein_name": "Tau-tubulin kinase 2", "gene_name": "TTBK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXR1-2", "protein_name": "Nuclear distribution protein nudE homolog 1", "gene_name": "NDE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75154-1", "protein_name": "Rab11 family-interacting protein 3", "gene_name": "RAB11FIP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NL6-1", "protein_name": "Sodium channel and clathrin linker 1", "gene_name": "SCLT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15078-1", "protein_name": "Centrosomal protein of 290 kDa", "gene_name": "CEP290", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53350-1", "protein_name": "Serine/threonine-protein kinase PLK1", "gene_name": "PLK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15051-1", "protein_name": "IQ calmodulin-binding motif-containing protein 1", "gene_name": "IQCB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95613-1", "protein_name": "Pericentrin", "gene_name": "PCNT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JTW2-1", "protein_name": "Centrosomal protein of 78 kDa", "gene_name": "CEP78", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BYV8-1", "protein_name": "Centrosomal protein of 41 kDa", "gene_name": "CEP41", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96SN8-1", "protein_name": "CDK5 regulatory subunit-associated protein 2", "gene_name": "CDK5RAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99871-1", "protein_name": "HAUS augmin-like complex subunit 7", "gene_name": "HAUS7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06493-1", "protein_name": "Cyclin-dependent kinase 1", "gene_name": "CDK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2K1-4", "protein_name": "Coiled-coil and C2 domain-containing protein 2A", "gene_name": "CC2D2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2I6-1", "protein_name": "Ninein-like protein", "gene_name": "NINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8K8P3-1", "protein_name": "Protein SFI1 homolog", "gene_name": "SFI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPV0-1", "protein_name": "Centrosomal protein of 164 kDa", "gene_name": "CEP164", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43303-1", "protein_name": "Centriolar coiled-coil protein of 110 kDa", "gene_name": "CCP110", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94986-4", "protein_name": "Centrosomal protein of 152 kDa", "gene_name": "CEP152", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41208-1", "protein_name": "Centrin-2", "gene_name": "CETN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5TB80-1", "protein_name": "Centrosomal protein of 162 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"uniprot_canonical_ac": "Q14028-1", "protein_name": "Cyclic nucleotide-gated channel beta-1", "gene_name": "CNGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13409-1", "protein_name": "Cytoplasmic dynein 1 intermediate chain 2", "gene_name": "DYNC1I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07437-1", "protein_name": "Tubulin beta chain", "gene_name": "TUBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2MV58-1", "protein_name": "Tectonic-1", "gene_name": "TCTN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ6-1", "protein_name": "HAUS augmin-like complex subunit 3", "gene_name": "HAUS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75161-1", "protein_name": "Nephrocystin-4", "gene_name": "NPHP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IW35-1", "protein_name": "Centrosomal protein of 97 kDa", "gene_name": "CEP97", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00444-1", "protein_name": "Serine/threonine-protein kinase PLK4", "gene_name": "PLK4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC77-1", "protein_name": "Centrosomal P4.1-associated protein", "gene_name": "CPAP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NHQ1-1", "protein_name": "Centrosomal protein of 70 kDa", "gene_name": "CEP70", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61163-1", "protein_name": "Alpha-centractin", "gene_name": "ACTR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99996-2", "protein_name": "A-kinase anchor protein 9", "gene_name": "AKAP9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49674-1", "protein_name": "Casein kinase I isoform epsilon", "gene_name": "CSNK1E", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15691-1", "protein_name": "Microtubule-associated protein RP/EB family member 1", "gene_name": "MAPRE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18085-1", "protein_name": "ADP-ribosylation factor 4", "gene_name": "ARF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCU4-1", "protein_name": "Centrosome-associated protein ALMS1", "gene_name": "ALMS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MT8-1", "protein_name": "Centrosomal protein of 63 kDa", "gene_name": "CEP63", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07900-1", "protein_name": "Heat shock protein HSP 90-alpha", "gene_name": "HSP90AA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96CS2-1", "protein_name": "HAUS augmin-like complex subunit 1", "gene_name": "HAUS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15259-1", "protein_name": "Nephrocystin-1", "gene_name": "NPHP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N157-1", "protein_name": "Jouberin", "gene_name": "AHI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92538-4", "protein_name": "Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1", "gene_name": "GBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16280-1", "protein_name": "Cyclic nucleotide-gated channel alpha-2", "gene_name": "CNGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BPU9-1", "protein_name": "B9 domain-containing protein 2", "gene_name": "B9D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IYI6-1", "protein_name": "Exocyst complex component 8", "gene_name": "EXOC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPM9-1", "protein_name": "B9 domain-containing protein 1", "gene_name": "B9D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13561-1", "protein_name": "Dynactin subunit 2", "gene_name": "DCTN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A65-1", "protein_name": "Exocyst complex component 4", "gene_name": "EXOC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23258-1", "protein_name": "Tubulin gamma-1 chain", "gene_name": "TUBG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4AC94-5", "protein_name": "C2 domain-containing protein 3", "gene_name": "C2CD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVX0-1", "protein_name": "HAUS augmin-like complex subunit 2", "gene_name": "HAUS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4H7-1", "protein_name": "HAUS augmin-like complex subunit 6", "gene_name": "HAUS6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15019-1", "protein_name": "Septin-2", "gene_name": "SEPTIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6D7-1", "protein_name": "HAUS augmin-like complex subunit 4", "gene_name": "HAUS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT25-1", "protein_name": "HAUS augmin-like complex subunit 8", "gene_name": "HAUS8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P98161-1", "protein_name": "Polycystin-1", "gene_name": "PKD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P209-1", "protein_name": "Centrosomal protein of 72 kDa", "gene_name": "CEP72", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75935-1", "protein_name": "Dynactin subunit 3", "gene_name": "DCTN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z460-1", "protein_name": "CLIP-associating protein 1", "gene_name": "CLASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5T7B8-1", "protein_name": "Kinesin-like protein KIF24", "gene_name": "KIF24", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14204-1", "protein_name": "Cytoplasmic dynein 1 heavy chain 1", "gene_name": "DYNC1H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43805-1", "protein_name": "Microtubule nucleation factor SSNA1", "gene_name": "SSNA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60645-1", "protein_name": "Exocyst complex component 3", "gene_name": "EXOC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPT5-3", "protein_name": "Exocyst complex component 7", "gene_name": "EXOC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NV70-1", "protein_name": "Exocyst complex component 1", "gene_name": "EXOC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TES7-1", "protein_name": "Fas-binding factor 1", "gene_name": "FBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94927-1", "protein_name": "HAUS augmin-like complex subunit 5", "gene_name": "HAUS5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NHV4-1", "protein_name": "Protein NEDD1", "gene_name": "NEDD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TAG9-1", "protein_name": "Exocyst complex component 6", "gene_name": "EXOC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5HYA8-1", "protein_name": "Meckelin", "gene_name": "TMEM67", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6NUS6-1", "protein_name": "Tectonic-3", "gene_name": "TCTN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0N5-1", "protein_name": "Transmembrane protein 216", "gene_name": "TMEM216", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61981-1", "protein_name": "14-3-3 protein gamma", "gene_name": "YWHAG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30153-1", "protein_name": "Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform", "gene_name": "PPP2R1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96L34-1", "protein_name": "MAP/microtubule affinity-regulating kinase 4", "gene_name": "MARK4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20308558", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 200 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Differential effects of TBC1D15 and mammalian Vps39 on Rab7 activation state, lysosomal morphology, and growth factor dependence.", "journal": "The Journal of biological chemistry", "date": "2010", "authors": "Peralta ER, Martin BC, Edinger AL", "reference": { "type": "PubMed", "id": "20363736", "url": "https://pubmed.ncbi.nlm.nih.gov/20363736" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IYJ3-1", "protein_name": "Synaptotagmin-like protein 1", "gene_name": "SYTL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4KMP7-1", "protein_name": "TBC1 domain family member 10B", "gene_name": "TBC1D10B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14088-1", "protein_name": "Ras-related protein Rab-33A", "gene_name": "RAB33A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95166-1", "protein_name": "Gamma-aminobutyric acid receptor-associated protein", "gene_name": "GABARAP", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15276-1", "protein_name": "Rab GTPase-binding effector protein 1", "gene_name": "RABEP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62491-1", "protein_name": "Ras-related protein Rab-11A", "gene_name": "RAB11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HA65-1", "protein_name": "TBC1 domain family member 17", "gene_name": "TBC1D17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2M4-1", "protein_name": "TBC1 domain family member 14", "gene_name": "TBC1D14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92574-1", "protein_name": "Hamartin", "gene_name": "TSC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVG8-1", "protein_name": "TBC1 domain family member 13", "gene_name": "TBC1D13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0N9-1", "protein_name": "TBC1 domain family member 7", "gene_name": "TBC1D7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJY5-1", "protein_name": "ADP-ribosylation factor-binding protein GGA1", "gene_name": "GGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JC1-1", "protein_name": "Vam6/Vps39-like protein", "gene_name": "VPS39", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96CV9-1", "protein_name": "Optineurin", "gene_name": "OPTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60520-1", "protein_name": "Gamma-aminobutyric acid receptor-associated protein-like 2", "gene_name": "GABARAPL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZQ8-1", "protein_name": "Microtubule-associated protein 1 light chain 3 beta", "gene_name": "MAP1LC3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62330-1", "protein_name": "ADP-ribosylation factor 6", "gene_name": "ARF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9CXF4-1", "protein_name": "TBC1 domain family member 15", "gene_name": "Tbc1d15", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P20338-1", "protein_name": "Ras-related protein Rab-4A", "gene_name": "RAB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZ52-1", "protein_name": "ADP-ribosylation factor-binding protein GGA3", "gene_name": "GGA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TC07-1", "protein_name": "TBC1 domain 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"uniprot_canonical_ac": "Q9UJY4-1", "protein_name": "ADP-ribosylation factor-binding protein GGA2", "gene_name": "GGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15907-1", "protein_name": "Ras-related protein Rab-11B", "gene_name": "RAB11B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H082-1", "protein_name": "Ras-related protein Rab-33B", "gene_name": "RAB33B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZP1-1", "protein_name": "TBC1 domain family member 3", "gene_name": "TBC1D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBP0-1", "protein_name": "TBC1 domain family member 16", "gene_name": "TBC1D16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULP9-1", "protein_name": "TBC1 domain family member 24", "gene_name": "TBC1D24", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3MII6-1", "protein_name": "TBC1 domain family member 25", "gene_name": "TBC1D25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3P9-1", "protein_name": "Rab GTPase-activating protein 1", "gene_name": "RABGAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV04-1", "protein_name": "Carabin", "gene_name": "TBC1D10C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BYX2-1", "protein_name": "TBC1 domain family member 2A", "gene_name": "TBC1D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49815-1", "protein_name": "Tuberin", "gene_name": "TSC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXI6-1", "protein_name": "TBC1 domain family member 10A", "gene_name": "TBC1D10A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20404108", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 121 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of the switch in early-to-late endosome transition.", "journal": "Cell", "date": "2010", "authors": "Poteryaev D, Datta S, Ackema K, Zerial M, Spang A", "reference": { "type": "PubMed", "id": "20434987", "url": "https://pubmed.ncbi.nlm.nih.gov/20434987" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H269-1", "protein_name": "Vacuolar protein sorting-associated protein 16 homolog", "gene_name": "VPS16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AX1-1", "protein_name": "Vacuolar protein sorting-associated protein 33A", "gene_name": "VPS33A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49754-1", "protein_name": "Vacuolar protein sorting-associated protein 41 homolog", "gene_name": "VPS41", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H270-1", "protein_name": "Vacuolar protein sorting-associated protein 11 homolog", "gene_name": "VPS11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P253-1", "protein_name": "Vacuolar protein sorting-associated protein 18 homolog", "gene_name": "VPS18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20434987", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 94 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 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"uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14672-1", "protein_name": "Disintegrin and metalloproteinase domain-containing protein 10", "gene_name": "ADAM10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Rab7: role of its 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"uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein 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"gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": 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DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog 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Integr. Biol.", "date": "2010", "authors": "Bucci Cecilia, Bakke Oddmund, Progida Cinzia", "reference": { "type": "PubMed", "id": "21057625", "url": "https://pubmed.ncbi.nlm.nih.gov/21057625" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21057625", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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"protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75379-1", "protein_name": "Vesicle-associated membrane protein 4", "gene_name": "VAMP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VIR6-4", "protein_name": "Vacuolar protein sorting-associated protein 53 homolog", "gene_name": "VPS53", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", 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"tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z6M1-1", "protein_name": "Rab9 effector protein with kelch motifs", "gene_name": "RABEPK", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UIL1-1", "protein_name": "Short coiled-coil protein", "gene_name": "SCOC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P1Q0-1", "protein_name": "Vacuolar protein sorting-associated protein 54", "gene_name": "VPS54", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UID3-1", "protein_name": "Vacuolar protein sorting-associated protein 51 homolog", "gene_name": "VPS51", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ9-2", "protein_name": "Vesicle transport through interaction with t-SNAREs homolog 1A", "gene_name": "VTI1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60664-1", "protein_name": "Perilipin-3", "gene_name": "PLIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P82094-1", "protein_name": "TATA element modulatory factor", "gene_name": "TMF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11717-1", "protein_name": "Cation-independent mannose-6-phosphate receptor", "gene_name": "IGF2R", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14662-1", "protein_name": "Syntaxin-16", "gene_name": "STX16", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20645-1", "protein_name": "Cation-dependent mannose-6-phosphate receptor", "gene_name": "M6PR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92738-1", "protein_name": "USP6 N-terminal-like protein", "gene_name": "USP6NL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96CN9-1", "protein_name": "GRIP and coiled-coil domain-containing protein 1", "gene_name": "GCC1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21183348", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 132 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structure-function analysis of VPS9-ankyrin-repeat protein (Varp) in the trafficking of tyrosinase-related protein 1 in melanocytes.", "journal": "The Journal of biological chemistry", "date": "2011", "authors": "Tamura K, Ohbayashi N, Ishibashi K, Fukuda M", "reference": { "type": "PubMed", "id": "21187289", "url": "https://pubmed.ncbi.nlm.nih.gov/21187289" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9CZE3-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "Rab32", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8QZZ8-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "Rab38", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q3UMR0-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "Ankrd27", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": 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"DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": 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"Human" }, { "uniprot_canonical_ac": "Q86XR8-1", "protein_name": "Centrosomal protein of 57 kDa", "gene_name": "CEP57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96ST8-1", "protein_name": "Centrosomal protein of 89 kDa", "gene_name": "CEP89", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y592-1", "protein_name": "Centrosomal protein of 83 kDa", "gene_name": "CEP83", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN4-1", "protein_name": "Centrosomal protein of 131 kDa", "gene_name": "CEP131", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z7A1-1", "protein_name": "Centriolin", "gene_name": "CNTRL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14028-1", "protein_name": "Cyclic nucleotide-gated channel beta-1", "gene_name": "CNGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13409-1", "protein_name": "Cytoplasmic dynein 1 intermediate chain 2", "gene_name": "DYNC1I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07437-1", "protein_name": "Tubulin beta chain", "gene_name": "TUBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2MV58-1", "protein_name": "Tectonic-1", "gene_name": "TCTN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ6-1", "protein_name": "HAUS augmin-like complex subunit 3", "gene_name": "HAUS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75161-1", "protein_name": "Nephrocystin-4", "gene_name": "NPHP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IW35-1", "protein_name": "Centrosomal protein of 97 kDa", "gene_name": "CEP97", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00444-1", "protein_name": "Serine/threonine-protein kinase PLK4", "gene_name": "PLK4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC77-1", "protein_name": "Centrosomal P4.1-associated protein", "gene_name": "CPAP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NHQ1-1", "protein_name": "Centrosomal protein of 70 kDa", "gene_name": "CEP70", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61163-1", "protein_name": "Alpha-centractin", "gene_name": "ACTR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99996-2", "protein_name": "A-kinase anchor protein 9", "gene_name": "AKAP9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49674-1", "protein_name": "Casein kinase I isoform epsilon", "gene_name": "CSNK1E", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15691-1", "protein_name": "Microtubule-associated protein RP/EB family member 1", "gene_name": "MAPRE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18085-1", "protein_name": "ADP-ribosylation factor 4", "gene_name": "ARF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCU4-1", "protein_name": "Centrosome-associated protein ALMS1", "gene_name": "ALMS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MT8-1", "protein_name": "Centrosomal protein of 63 kDa", "gene_name": "CEP63", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07900-1", "protein_name": "Heat shock protein HSP 90-alpha", "gene_name": "HSP90AA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96CS2-1", "protein_name": "HAUS augmin-like complex subunit 1", "gene_name": "HAUS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15259-1", "protein_name": "Nephrocystin-1", "gene_name": "NPHP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N157-1", "protein_name": "Jouberin", "gene_name": "AHI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92538-4", "protein_name": "Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1", "gene_name": "GBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16280-1", "protein_name": "Cyclic nucleotide-gated channel alpha-2", "gene_name": "CNGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BPU9-1", "protein_name": "B9 domain-containing protein 2", "gene_name": "B9D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IYI6-1", "protein_name": "Exocyst complex component 8", "gene_name": "EXOC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPM9-1", "protein_name": "B9 domain-containing protein 1", "gene_name": "B9D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13561-1", "protein_name": "Dynactin subunit 2", "gene_name": "DCTN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A65-1", "protein_name": "Exocyst complex component 4", "gene_name": "EXOC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23258-1", "protein_name": "Tubulin gamma-1 chain", "gene_name": "TUBG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4AC94-5", "protein_name": "C2 domain-containing protein 3", "gene_name": "C2CD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVX0-1", "protein_name": "HAUS augmin-like complex subunit 2", "gene_name": "HAUS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4H7-1", "protein_name": "HAUS augmin-like complex subunit 6", "gene_name": "HAUS6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15019-1", "protein_name": "Septin-2", "gene_name": "SEPTIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6D7-1", "protein_name": "HAUS augmin-like complex subunit 4", "gene_name": "HAUS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT25-1", "protein_name": "HAUS augmin-like complex subunit 8", "gene_name": "HAUS8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P98161-1", "protein_name": "Polycystin-1", "gene_name": "PKD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P209-1", "protein_name": "Centrosomal protein of 72 kDa", "gene_name": "CEP72", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75935-1", "protein_name": "Dynactin subunit 3", "gene_name": "DCTN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z460-1", "protein_name": "CLIP-associating protein 1", "gene_name": "CLASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5T7B8-1", "protein_name": "Kinesin-like protein KIF24", "gene_name": "KIF24", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14204-1", "protein_name": "Cytoplasmic dynein 1 heavy chain 1", "gene_name": "DYNC1H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43805-1", "protein_name": "Microtubule nucleation factor SSNA1", "gene_name": "SSNA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60645-1", "protein_name": "Exocyst complex component 3", "gene_name": "EXOC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPT5-3", "protein_name": "Exocyst complex component 7", "gene_name": "EXOC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NV70-1", "protein_name": "Exocyst complex component 1", "gene_name": "EXOC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TES7-1", "protein_name": "Fas-binding factor 1", "gene_name": "FBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94927-1", "protein_name": "HAUS augmin-like complex subunit 5", "gene_name": "HAUS5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NHV4-1", "protein_name": "Protein NEDD1", "gene_name": "NEDD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TAG9-1", "protein_name": "Exocyst complex component 6", "gene_name": "EXOC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5HYA8-1", "protein_name": "Meckelin", "gene_name": "TMEM67", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6NUS6-1", "protein_name": "Tectonic-3", "gene_name": "TCTN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0N5-1", "protein_name": "Transmembrane protein 216", "gene_name": "TMEM216", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61981-1", "protein_name": "14-3-3 protein gamma", "gene_name": "YWHAG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30153-1", "protein_name": "Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform", "gene_name": "PPP2R1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96L34-1", "protein_name": "MAP/microtubule affinity-regulating kinase 4", "gene_name": "MARK4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21273506", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 202 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "DENN domain proteins: regulators of Rab GTPases.", "journal": "The Journal of biological chemistry", "date": "2011", "authors": "Marat AL, Dokainish H, McPherson PS", "reference": { "type": "PubMed", "id": "21330364", "url": "https://pubmed.ncbi.nlm.nih.gov/21330364" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", 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"gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8BH65-1", "protein_name": "Protein DENND6A", "gene_name": "Dennd6a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D9V7-1", "protein_name": "Protein DENND6B", "gene_name": "Dennd6b", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21330364", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 91 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] 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"glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "OATL1, a novel autophagosome-resident Rab33B-GAP, regulates autophagosomal maturation.", "journal": "The Journal of cell biology", "date": "2011", "authors": "Itoh T, Kanno E, Uemura T, Waguri S, Fukuda M", "reference": { "type": "PubMed", "id": "21383079", "url": "https://pubmed.ncbi.nlm.nih.gov/21383079" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IYJ3-1", "protein_name": 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}, { "uniprot_canonical_ac": "Q3MII6-1", "protein_name": "TBC1 domain family member 25", "gene_name": "TBC1D25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3P9-1", "protein_name": "Rab GTPase-activating protein 1", "gene_name": "RABGAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV04-1", "protein_name": "Carabin", "gene_name": "TBC1D10C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BYX2-1", "protein_name": "TBC1 domain family member 2A", "gene_name": "TBC1D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49815-1", "protein_name": "Tuberin", "gene_name": "TSC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXI6-1", "protein_name": "TBC1 domain family member 10A", "gene_name": "TBC1D10A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 134, "end_pos": 135, "sequence_org": "ED", "sequence_mut": "AA", "comment": "Severely affects interaction with GABARAP. Does not localize at autophagosomes.", "evidence": [ { "database": "UniProtKB", "id": "Q3MII6", "url": "https://www.uniprot.org/uniprotkb/Q3MII6" }, { "database": "PubMed", "id": "21383079", "url": "https://pubmed.ncbi.nlm.nih.gov/21383079" } ], "uniprot_canonical_ac": "Q3MII6-1" }, { "start_pos": 136, "end_pos": 136, "sequence_org": "W", "sequence_mut": "A", "comment": "Abolishes interaction with GABARAP. 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"protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53365-1", "protein_name": "Arfaptin-2", "gene_name": "ARFIP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13439-1", "protein_name": "Golgin subfamily A member 4", "gene_name": "GOLGA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WTW3-1", "protein_name": "Conserved oligomeric Golgi complex subunit 1", "gene_name": "COG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JB2-1", "protein_name": "Conserved oligomeric Golgi complex subunit 3", 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"Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q147X3-1", "protein_name": "N-alpha-acetyltransferase 30", "gene_name": "NAA30", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZE5-1", "protein_name": "N-alpha-acetyltransferase 35, NatC auxiliary subunit", "gene_name": "NAA35", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z6M1-1", "protein_name": "Rab9 effector protein with kelch motifs", "gene_name": "RABEPK", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UIL1-1", "protein_name": "Short coiled-coil protein", "gene_name": "SCOC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P1Q0-1", "protein_name": "Vacuolar protein sorting-associated protein 54", "gene_name": "VPS54", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UID3-1", "protein_name": "Vacuolar protein sorting-associated protein 51 homolog", "gene_name": "VPS51", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ9-2", "protein_name": "Vesicle transport through interaction with t-SNAREs homolog 1A", "gene_name": "VTI1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60664-1", "protein_name": "Perilipin-3", "gene_name": "PLIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P82094-1", "protein_name": "TATA element modulatory factor", "gene_name": "TMF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11717-1", "protein_name": "Cation-independent mannose-6-phosphate receptor", "gene_name": "IGF2R", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14662-1", "protein_name": "Syntaxin-16", "gene_name": "STX16", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20645-1", "protein_name": "Cation-dependent mannose-6-phosphate receptor", "gene_name": "M6PR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92738-1", "protein_name": "USP6 N-terminal-like protein", "gene_name": "USP6NL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96CN9-1", "protein_name": "GRIP and coiled-coil domain-containing protein 1", "gene_name": "GCC1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21421921", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 132 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Loss of skywalker reveals synaptic endosomes as sorting stations for synaptic vesicle proteins.", "journal": "Cell", "date": "2011", "authors": "Uytterhoeven V, Kuenen S, Kasprowicz J, Miskiewicz K, Verstreken P", "reference": { "type": "PubMed", "id": "21458671", "url": "https://pubmed.ncbi.nlm.nih.gov/21458671" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IYJ3-1", "protein_name": "Synaptotagmin-like protein 1", "gene_name": "SYTL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking 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kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14088-1", "protein_name": "Ras-related protein Rab-33A", "gene_name": "RAB33A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95166-1", "protein_name": "Gamma-aminobutyric acid receptor-associated protein", "gene_name": "GABARAP", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15276-1", "protein_name": "Rab GTPase-binding effector protein 1", "gene_name": "RABEP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62491-1", "protein_name": "Ras-related protein Rab-11A", "gene_name": "RAB11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HA65-1", "protein_name": "TBC1 domain family member 17", "gene_name": "TBC1D17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9VIH7-1", "protein_name": "GTPase-activating protein skywalker", "gene_name": "sky", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": 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"protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96CV9-1", "protein_name": "Optineurin", "gene_name": "OPTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60520-1", "protein_name": "Gamma-aminobutyric acid receptor-associated protein-like 2", "gene_name": "GABARAPL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": 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"gene_name": "GGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZP1-1", "protein_name": "TBC1 domain family member 3", "gene_name": "TBC1D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBP0-1", "protein_name": "TBC1 domain family member 16", "gene_name": "TBC1D16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULP9-1", "protein_name": "TBC1 domain family member 24", "gene_name": "TBC1D24", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"TBC1D10C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BYX2-1", "protein_name": "TBC1 domain family member 2A", "gene_name": "TBC1D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { 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"glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 543, "end_pos": 543, "sequence_org": "G", "sequence_mut": "R", "comment": "In sky-1; embryonic lethal.", "evidence": [ { "database": "UniProtKB", "id": "Q9VIH7", "url": "https://www.uniprot.org/uniprotkb/Q9VIH7" }, { "database": "PubMed", "id": "21458671", "url": "https://pubmed.ncbi.nlm.nih.gov/21458671" } ], "uniprot_canonical_ac": "Q9VIH7-1" } ], "record_id": "pubmed.21458671", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 122 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 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transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", "protein_name": "Protein SEC13 homolog", "gene_name": "SEC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75396-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "SEC22B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JE7-1", "protein_name": "Protein transport protein Sec16B", "gene_name": "SEC16B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95487-1", "protein_name": "Protein transport protein Sec24B", "gene_name": "SEC24B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56962-1", "protein_name": "Syntaxin-17", "gene_name": "STX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing protein 10", "gene_name": "TMED10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14653-1", "protein_name": "Golgi SNAP receptor complex member 2", "gene_name": "GOSR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15303-1", "protein_name": "Protein transport protein SEC23", "gene_name": "SEC23", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 555, "end_pos": 555, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "P15303", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P15303" }, { "database": "PubMed", "id": "21532587", "url": "https://pubmed.ncbi.nlm.nih.gov/21532587" }, { "database": "SGD", "id": "S000006385", "url": "https://www.yeastgenome.org/locus/S000006385" } ], "site_lbl": "Thr555", "uniprot_canonical_ac": "P15303-1" }, { "start_pos": 742, "end_pos": 742, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "P15303", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P15303" }, { "database": "PubMed", "id": "21532587", "url": "https://pubmed.ncbi.nlm.nih.gov/21532587" }, { "database": "SGD", "id": "S000006385", "url": "https://www.yeastgenome.org/locus/S000006385" } ], "site_lbl": "Ser742", "uniprot_canonical_ac": "P15303-1" }, { "start_pos": 747, "end_pos": 747, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "P15303", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P15303" }, { "database": "PubMed", "id": "21532587", "url": "https://pubmed.ncbi.nlm.nih.gov/21532587" }, { "database": "SGD", "id": "S000006385", "url": "https://www.yeastgenome.org/locus/S000006385" } ], "site_lbl": "Thr747", "uniprot_canonical_ac": "P15303-1" } ], "record_id": "pubmed.21532587", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 147 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Rab27a targeting to melanosomes requires nucleotide exchange but not effector binding.", "journal": "Traffic (Copenhagen, Denmark)", "date": "2011", "authors": "Tarafder AK, Wasmeier C, Figueiredo AC, Booth AE, Orihara A, Ramalho JS, Hume AN, Seabra MC", "reference": { "type": "PubMed", "id": "21554507", "url": "https://pubmed.ncbi.nlm.nih.gov/21554507" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange 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"protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21554507", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 89 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of RIN3 as a guanine nucleotide exchange factor for the Rab5 subfamily GTPase Rab31.", "journal": "The Journal of biological chemistry", "date": "2011", "authors": "Kajiho H, Sakurai K, Minoda T, Yoshikawa M, Nakagawa S, Fukushima S, Kontani K, Katada T", "reference": { "type": "PubMed", "id": "21586568", "url": "https://pubmed.ncbi.nlm.nih.gov/21586568" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 825, "end_pos": 825, "sequence_org": "Y", "sequence_mut": "A", "comment": "Strongly reduced guanine nucleotide exchange factor activity toward RAB31; when associated with A-828.", "evidence": [ { "database": "UniProtKB", "id": "Q8TB24", "url": "https://www.uniprot.org/uniprotkb/Q8TB24" }, { "database": "PubMed", "id": "21586568", "url": "https://pubmed.ncbi.nlm.nih.gov/21586568" } ], "uniprot_canonical_ac": "Q8TB24-1" }, { "start_pos": 828, "end_pos": 828, "sequence_org": "T", "sequence_mut": "A", "comment": "Strongly reduced guanine nucleotide exchange factor activity toward RAB31; when associated with A-825.", "evidence": [ { "database": "UniProtKB", "id": "Q8TB24", "url": "https://www.uniprot.org/uniprotkb/Q8TB24" }, { "database": "PubMed", "id": "21586568", "url": "https://pubmed.ncbi.nlm.nih.gov/21586568" } ], "uniprot_canonical_ac": "Q8TB24-1" } ], "record_id": "pubmed.21586568", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 89 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Membrane dynamics and fusion at late endosomes and vacuoles--Rab regulation, multisubunit tethering complexes and SNAREs.", "journal": "European journal of cell biology", "date": "2011", "authors": "Epp N, Rethmeier R, Kramer L, Ungermann C", "reference": { "type": "PubMed", "id": "21683469", "url": "https://pubmed.ncbi.nlm.nih.gov/21683469" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21683469", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 89 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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"field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Rab35 GTPase and OCRL phosphatase remodel lipids and F-actin for successful cytokinesis.", "journal": "Nature cell biology", "date": "2011", "authors": "Dambournet D, Machicoane M, Chesneau L, Sachse M, Rocancourt M, El Marjou A, Formstecher E, Salomon R, Goud B, Echard A", "reference": { "type": "PubMed", "id": "21706022", "url": "https://pubmed.ncbi.nlm.nih.gov/21706022" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21706022", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 89 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { 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"glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Small GTPase Rab12 regulates constitutive degradation of transferrin receptor.", "journal": "Traffic (Copenhagen, Denmark)", "date": "2011", "authors": "Matsui T, Itoh T, Fukuda M", "reference": { "type": "PubMed", "id": "21718402", "url": "https://pubmed.ncbi.nlm.nih.gov/21718402" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RT67-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "Dennd3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35283-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "Rab12", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 100, "end_pos": 100, "sequence_org": "Q", "sequence_mut": "L", "comment": "Probable constitutively active mutant unable to hydrolyze GTP; increases degradation of the transferrin receptor.", "evidence": [ { "database": "UniProtKB", "id": "P35283", "url": "https://www.uniprot.org/uniprotkb/P35283" }, { "database": "PubMed", "id": "21718402", "url": "https://pubmed.ncbi.nlm.nih.gov/21718402" } ], "uniprot_canonical_ac": "P35283-1" } ], "record_id": "pubmed.21718402", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 91 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Distinct yet overlapping roles of Rab GTPases on synaptic vesicles.", "journal": "Small GTPases", "date": "2011", "authors": "Pavlos NJ, Jahn R", "reference": { "type": "PubMed", "id": "21776405", "url": "https://pubmed.ncbi.nlm.nih.gov/21776405" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex 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"Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "MICAL-L1 is a tubular endosomal membrane hub that connects Rab35 and Arf6 with Rab8a.", "journal": "Traffic (Copenhagen, Denmark)", "date": "2012", "authors": "Rahajeng J, Giridharan SS, Cai B, Naslavsky N, Caplan S", "reference": { "type": "PubMed", "id": "21951725", "url": "https://pubmed.ncbi.nlm.nih.gov/21951725" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62330-1", "protein_name": "ADP-ribosylation factor 6", "gene_name": "ARF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N3F8-1", "protein_name": "MICAL-like protein 1", "gene_name": "MICALL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21951725", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 91 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Insights regarding guanine nucleotide exchange from the structure of a DENN-domain protein complexed with its Rab GTPase substrate.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2011", "authors": "Wu X, Bradley MJ, Cai Y, Kummel D, De La Cruz EM, Barr FA, Reinisch KM", "reference": { "type": "PubMed", "id": "22065758", "url": "https://pubmed.ncbi.nlm.nih.gov/22065758" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22065758", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 89 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Connecdenn 3/DENND1C binds actin linking Rab35 activation to the actin cytoskeleton.", "journal": "Molecular biology of the cell", "date": "2012", "authors": "Marat AL, Ioannou MS, McPherson PS", "reference": { "type": "PubMed", "id": "22072793", "url": "https://pubmed.ncbi.nlm.nih.gov/22072793" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22072793", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 89 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Rab21-GEF activity of Varp, but not its Rab32/38 effector function, is required for dendrite formation in melanocytes.", "journal": "Molecular biology of the cell", "date": "2012", "authors": "Ohbayashi N, Yatsu A, Tamura K, Fukuda M", "reference": { "type": "PubMed", "id": "22171327", "url": "https://pubmed.ncbi.nlm.nih.gov/22171327" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3UMR0-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "Ankrd27", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "EPI64 interacts with Slp1/JFC1 to coordinate Rab8a and Arf6 membrane trafficking.", "journal": "Molecular biology of the cell", "date": "2012", "authors": "Hokanson DE, Bretscher AP", "reference": { "type": "PubMed", "id": "22219378", "url": "https://pubmed.ncbi.nlm.nih.gov/22219378" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IYJ3-1", "protein_name": "Synaptotagmin-like protein 1", "gene_name": "SYTL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4KMP7-1", "protein_name": "TBC1 domain family member 10B", "gene_name": "TBC1D10B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14088-1", "protein_name": "Ras-related protein Rab-33A", "gene_name": "RAB33A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95166-1", "protein_name": "Gamma-aminobutyric acid receptor-associated protein", "gene_name": 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"GABARAPL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZQ8-1", "protein_name": "Microtubule-associated protein 1 light chain 3 beta", "gene_name": "MAP1LC3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62330-1", "protein_name": "ADP-ribosylation factor 6", "gene_name": "ARF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20338-1", "protein_name": "Ras-related protein Rab-4A", "gene_name": "RAB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZ52-1", "protein_name": "ADP-ribosylation factor-binding protein GGA3", "gene_name": "GGA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TC07-1", "protein_name": "TBC1 domain family member 15", "gene_name": "TBC1D15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJY4-1", "protein_name": "ADP-ribosylation factor-binding protein GGA2", "gene_name": "GGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15907-1", "protein_name": "Ras-related protein Rab-11B", "gene_name": "RAB11B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H082-1", "protein_name": "Ras-related protein Rab-33B", "gene_name": "RAB33B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZP1-1", "protein_name": "TBC1 domain family member 3", "gene_name": "TBC1D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBP0-1", "protein_name": "TBC1 domain family member 16", "gene_name": "TBC1D16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULP9-1", "protein_name": "TBC1 domain family member 24", "gene_name": "TBC1D24", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3MII6-1", "protein_name": "TBC1 domain family member 25", "gene_name": "TBC1D25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family 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domain family member 10A", "gene_name": "TBC1D10A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22219378", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 44 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Plk1-dependent phosphorylation of optineurin provides a negative feedback mechanism for mitotic progression.", "journal": "Molecular cell", "date": "2012", "authors": "Kachaner D, Filipe J, Laplantine E, Bauch A, Bennett KL, Superti-Furga G, Israel A, Weil R", "reference": { "type": "PubMed", "id": "22365832", "url": "https://pubmed.ncbi.nlm.nih.gov/22365832" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SQ7-1", "protein_name": "Serologically defined colon cancer antigen 8", "gene_name": "SDCCAG8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TAP6-1", "protein_name": "Centrosomal protein of 76 kDa", "gene_name": "CEP76", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51955-1", "protein_name": "Serine/threonine-protein kinase Nek2", "gene_name": "NEK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14965-1", "protein_name": "Aurora kinase A", "gene_name": "AURKA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15154-1", "protein_name": "Pericentriolar material 1 protein", "gene_name": "PCM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13616-1", "protein_name": "Cullin-1", "gene_name": "CUL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5BJF6-1", "protein_name": "Outer dense fiber protein 2", "gene_name": "ODF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14008-1", "protein_name": "Cytoskeleton-associated protein 5", "gene_name": "CKAP5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95684-1", "protein_name": "Centrosomal protein 43", "gene_name": "CEP43", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEP8-3", "protein_name": "Centrosomal protein of 192 kDa", "gene_name": "CEP192", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BV73-1", "protein_name": "Centrosome-associated protein CEP250", "gene_name": "CEP250", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43034-1", "protein_name": "Platelet-activating factor acetylhydrolase IB subunit beta", "gene_name": "PAFAH1B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXR1-2", "protein_name": "Nuclear distribution protein nudE homolog 1", "gene_name": "NDE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15078-1", "protein_name": "Centrosomal protein of 290 kDa", "gene_name": "CEP290", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53350-1", "protein_name": "Serine/threonine-protein kinase PLK1", "gene_name": "PLK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95613-1", "protein_name": "Pericentrin", "gene_name": "PCNT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JTW2-1", "protein_name": "Centrosomal protein of 78 kDa", "gene_name": "CEP78", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BYV8-1", "protein_name": "Centrosomal protein of 41 kDa", "gene_name": "CEP41", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96SN8-1", "protein_name": "CDK5 regulatory subunit-associated protein 2", "gene_name": "CDK5RAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99871-1", "protein_name": "HAUS augmin-like complex subunit 7", "gene_name": "HAUS7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06493-1", "protein_name": "Cyclin-dependent kinase 1", "gene_name": "CDK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2I6-1", "protein_name": "Ninein-like protein", "gene_name": "NINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8K8P3-1", "protein_name": "Protein SFI1 homolog", "gene_name": "SFI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPV0-1", "protein_name": "Centrosomal protein of 164 kDa", "gene_name": "CEP164", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43303-1", "protein_name": "Centriolar coiled-coil protein of 110 kDa", "gene_name": "CCP110", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94986-4", "protein_name": "Centrosomal protein of 152 kDa", "gene_name": "CEP152", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41208-1", "protein_name": "Centrin-2", "gene_name": "CETN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q66GS9-1", "protein_name": "Centrosomal protein of 135 kDa", "gene_name": "CEP135", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86XR8-1", "protein_name": "Centrosomal protein of 57 kDa", "gene_name": "CEP57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN4-1", "protein_name": "Centrosomal protein of 131 kDa", "gene_name": "CEP131", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z7A1-1", "protein_name": "Centriolin", "gene_name": "CNTRL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13409-1", "protein_name": "Cytoplasmic dynein 1 intermediate chain 2", "gene_name": "DYNC1I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07437-1", "protein_name": "Tubulin beta chain", "gene_name": "TUBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ6-1", "protein_name": "HAUS augmin-like complex subunit 3", "gene_name": "HAUS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96CV9-1", "protein_name": "Optineurin", "gene_name": "OPTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00444-1", "protein_name": "Serine/threonine-protein kinase PLK4", "gene_name": "PLK4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC77-1", "protein_name": "Centrosomal P4.1-associated protein", "gene_name": "CPAP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NHQ1-1", "protein_name": "Centrosomal protein of 70 kDa", "gene_name": "CEP70", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61163-1", "protein_name": "Alpha-centractin", "gene_name": "ACTR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IF1-1", "protein_name": "LIM domain-containing protein ajuba", "gene_name": "AJUBA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99996-2", "protein_name": "A-kinase anchor protein 9", "gene_name": "AKAP9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49674-1", "protein_name": "Casein kinase I isoform epsilon", "gene_name": "CSNK1E", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15691-1", "protein_name": "Microtubule-associated protein RP/EB family member 1", "gene_name": "MAPRE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62140-1", "protein_name": "Serine/threonine-protein phosphatase PP1-beta catalytic subunit", "gene_name": "PPP1CB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCU4-1", "protein_name": "Centrosome-associated protein ALMS1", "gene_name": "ALMS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MT8-1", "protein_name": "Centrosomal protein of 63 kDa", "gene_name": "CEP63", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07900-1", "protein_name": "Heat shock protein HSP 90-alpha", "gene_name": "HSP90AA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96CS2-1", "protein_name": "HAUS augmin-like complex subunit 1", "gene_name": "HAUS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y297-1", "protein_name": "F-box/WD repeat-containing protein 1A", "gene_name": "BTRC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKB1-1", "protein_name": "F-box/WD repeat-containing protein 11", "gene_name": "FBXW11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13561-1", "protein_name": "Dynactin subunit 2", "gene_name": "DCTN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23258-1", "protein_name": "Tubulin gamma-1 chain", "gene_name": "TUBG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVX0-1", "protein_name": "HAUS augmin-like complex subunit 2", "gene_name": "HAUS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4H7-1", "protein_name": "HAUS augmin-like complex subunit 6", "gene_name": "HAUS6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6D7-1", "protein_name": "HAUS augmin-like complex subunit 4", "gene_name": "HAUS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT25-1", "protein_name": "HAUS augmin-like complex subunit 8", "gene_name": "HAUS8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P209-1", "protein_name": "Centrosomal protein of 72 kDa", "gene_name": "CEP72", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95067-1", "protein_name": "G2/mitotic-specific cyclin-B2", "gene_name": "CCNB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14635-1", "protein_name": "G2/mitotic-specific cyclin-B1", "gene_name": "CCNB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PGQ7-1", "protein_name": "Protein aurora borealis", "gene_name": "BORA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75935-1", "protein_name": "Dynactin subunit 3", "gene_name": "DCTN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14974-1", "protein_name": "Protein phosphatase 1 regulatory subunit 12A", 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"uniprot_canonical_ac": "Q8NHV4-1", "protein_name": "Protein NEDD1", "gene_name": "NEDD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": 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"abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 172 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A Rab8 guanine nucleotide exchange factor-effector interaction network regulates primary ciliogenesis.", "journal": "The Journal of biological chemistry", "date": "2012", "authors": "Feng S, Knodler A, Ren J, Zhang J, Zhang X, Hong Y, Huang S, Peranen J, Guo W", "reference": { "type": "PubMed", "id": "22433857", "url": "https://pubmed.ncbi.nlm.nih.gov/22433857" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SQ7-1", "protein_name": "Serologically defined colon cancer antigen 8", "gene_name": "SDCCAG8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TAP6-1", "protein_name": "Centrosomal protein of 76 kDa", "gene_name": "CEP76", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51955-1", "protein_name": "Serine/threonine-protein kinase Nek2", "gene_name": "NEK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15154-1", "protein_name": "Pericentriolar material 1 protein", "gene_name": "PCM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULH1-1", "protein_name": "Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1", "gene_name": "ASAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00471-1", "protein_name": "Exocyst complex component 5", "gene_name": "EXOC5", "tax_name": "Human" }, { 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member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV77-1", "protein_name": "Cyclic nucleotide-gated channel alpha-4", "gene_name": "CNGA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BV73-1", "protein_name": "Centrosome-associated protein CEP250", "gene_name": "CEP250", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43034-1", "protein_name": "Platelet-activating factor acetylhydrolase IB subunit beta", "gene_name": "PAFAH1B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08100-1", "protein_name": "Rhodopsin", "gene_name": "RHO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ55-1", "protein_name": "Tau-tubulin kinase 2", "gene_name": "TTBK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXR1-2", "protein_name": "Nuclear distribution protein nudE homolog 1", "gene_name": "NDE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75154-1", "protein_name": "Rab11 family-interacting protein 3", "gene_name": "RAB11FIP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NL6-1", "protein_name": "Sodium channel and clathrin linker 1", "gene_name": "SCLT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15078-1", "protein_name": "Centrosomal protein of 290 kDa", "gene_name": "CEP290", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53350-1", "protein_name": "Serine/threonine-protein kinase PLK1", "gene_name": "PLK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15051-1", "protein_name": "IQ calmodulin-binding motif-containing protein 1", "gene_name": "IQCB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95613-1", "protein_name": "Pericentrin", "gene_name": "PCNT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JTW2-1", "protein_name": "Centrosomal protein of 78 kDa", "gene_name": "CEP78", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BYV8-1", "protein_name": "Centrosomal protein of 41 kDa", "gene_name": "CEP41", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96SN8-1", "protein_name": "CDK5 regulatory subunit-associated protein 2", "gene_name": "CDK5RAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99871-1", "protein_name": "HAUS augmin-like complex subunit 7", "gene_name": "HAUS7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06493-1", "protein_name": "Cyclin-dependent kinase 1", "gene_name": "CDK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2K1-4", "protein_name": "Coiled-coil and C2 domain-containing protein 2A", "gene_name": "CC2D2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2I6-1", "protein_name": "Ninein-like protein", "gene_name": "NINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8K8P3-1", "protein_name": "Protein SFI1 homolog", "gene_name": "SFI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPV0-1", "protein_name": "Centrosomal protein of 164 kDa", "gene_name": "CEP164", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43303-1", "protein_name": "Centriolar coiled-coil protein of 110 kDa", "gene_name": "CCP110", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94986-4", "protein_name": "Centrosomal protein of 152 kDa", "gene_name": "CEP152", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41208-1", "protein_name": "Centrin-2", "gene_name": "CETN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5TB80-1", "protein_name": "Centrosomal protein of 162 kDa", "gene_name": "CEP162", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q66GS9-1", "protein_name": "Centrosomal protein of 135 kDa", "gene_name": "CEP135", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86XR8-1", "protein_name": "Centrosomal protein of 57 kDa", "gene_name": "CEP57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96ST8-1", "protein_name": "Centrosomal protein of 89 kDa", "gene_name": "CEP89", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y592-1", "protein_name": "Centrosomal protein of 83 kDa", "gene_name": "CEP83", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN4-1", "protein_name": "Centrosomal protein of 131 kDa", "gene_name": "CEP131", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z7A1-1", "protein_name": "Centriolin", "gene_name": "CNTRL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14028-1", "protein_name": "Cyclic nucleotide-gated channel beta-1", "gene_name": "CNGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13409-1", "protein_name": "Cytoplasmic dynein 1 intermediate chain 2", "gene_name": "DYNC1I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07437-1", "protein_name": "Tubulin beta chain", "gene_name": "TUBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2MV58-1", "protein_name": "Tectonic-1", "gene_name": "TCTN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ6-1", "protein_name": "HAUS augmin-like complex subunit 3", "gene_name": "HAUS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75161-1", "protein_name": "Nephrocystin-4", "gene_name": "NPHP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IW35-1", "protein_name": "Centrosomal protein of 97 kDa", "gene_name": "CEP97", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00444-1", "protein_name": "Serine/threonine-protein kinase PLK4", "gene_name": "PLK4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC77-1", "protein_name": "Centrosomal P4.1-associated protein", "gene_name": "CPAP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NHQ1-1", "protein_name": "Centrosomal protein of 70 kDa", "gene_name": "CEP70", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61163-1", "protein_name": "Alpha-centractin", "gene_name": "ACTR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99996-2", "protein_name": "A-kinase anchor protein 9", "gene_name": "AKAP9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49674-1", "protein_name": "Casein kinase I isoform epsilon", "gene_name": "CSNK1E", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15691-1", "protein_name": "Microtubule-associated protein RP/EB family member 1", "gene_name": "MAPRE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18085-1", "protein_name": "ADP-ribosylation factor 4", "gene_name": "ARF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCU4-1", "protein_name": "Centrosome-associated protein ALMS1", "gene_name": "ALMS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MT8-1", "protein_name": "Centrosomal protein of 63 kDa", "gene_name": "CEP63", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07900-1", "protein_name": "Heat shock protein HSP 90-alpha", "gene_name": "HSP90AA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96CS2-1", "protein_name": "HAUS augmin-like complex subunit 1", "gene_name": "HAUS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15259-1", "protein_name": "Nephrocystin-1", "gene_name": "NPHP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N157-1", "protein_name": "Jouberin", "gene_name": "AHI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92538-4", "protein_name": "Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1", "gene_name": "GBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16280-1", "protein_name": "Cyclic nucleotide-gated channel alpha-2", "gene_name": "CNGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2D4-1", "protein_name": "Exocyst complex component 6B", "gene_name": "EXOC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BPU9-1", "protein_name": "B9 domain-containing protein 2", "gene_name": "B9D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IYI6-1", "protein_name": "Exocyst complex component 8", "gene_name": "EXOC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPM9-1", "protein_name": "B9 domain-containing protein 1", "gene_name": "B9D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13561-1", "protein_name": "Dynactin subunit 2", "gene_name": "DCTN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A65-1", "protein_name": "Exocyst complex component 4", "gene_name": "EXOC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23258-1", "protein_name": "Tubulin gamma-1 chain", "gene_name": "TUBG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4AC94-5", "protein_name": "C2 domain-containing protein 3", "gene_name": "C2CD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVX0-1", "protein_name": "HAUS augmin-like complex subunit 2", "gene_name": "HAUS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4H7-1", "protein_name": "HAUS augmin-like complex subunit 6", "gene_name": "HAUS6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15019-1", "protein_name": "Septin-2", "gene_name": "SEPTIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6D7-1", "protein_name": "HAUS augmin-like complex subunit 4", "gene_name": "HAUS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT25-1", "protein_name": "HAUS augmin-like complex subunit 8", "gene_name": "HAUS8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P98161-1", "protein_name": "Polycystin-1", "gene_name": "PKD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P209-1", "protein_name": "Centrosomal protein of 72 kDa", "gene_name": "CEP72", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75935-1", "protein_name": "Dynactin subunit 3", "gene_name": "DCTN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z460-1", "protein_name": "CLIP-associating protein 1", "gene_name": "CLASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5T7B8-1", "protein_name": "Kinesin-like protein KIF24", "gene_name": "KIF24", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14204-1", "protein_name": "Cytoplasmic dynein 1 heavy chain 1", "gene_name": "DYNC1H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43805-1", "protein_name": "Microtubule nucleation factor SSNA1", "gene_name": "SSNA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60645-1", "protein_name": "Exocyst complex component 3", "gene_name": "EXOC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPT5-3", "protein_name": "Exocyst complex component 7", "gene_name": "EXOC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NV70-1", "protein_name": "Exocyst complex component 1", "gene_name": "EXOC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TES7-1", "protein_name": "Fas-binding factor 1", "gene_name": "FBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94927-1", "protein_name": "HAUS augmin-like complex subunit 5", "gene_name": "HAUS5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NHV4-1", "protein_name": "Protein NEDD1", "gene_name": "NEDD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TAG9-1", "protein_name": "Exocyst complex component 6", "gene_name": "EXOC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5HYA8-1", "protein_name": "Meckelin", "gene_name": "TMEM67", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6NUS6-1", "protein_name": "Tectonic-3", "gene_name": "TCTN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0N5-1", "protein_name": "Transmembrane protein 216", "gene_name": "TMEM216", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61981-1", "protein_name": "14-3-3 protein gamma", "gene_name": "YWHAG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30153-1", "protein_name": "Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform", "gene_name": "PPP2R1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96L34-1", "protein_name": "MAP/microtubule affinity-regulating kinase 4", "gene_name": "MARK4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22433857", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 201 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "BLOC-2, AP-3, and AP-1 proteins function in concert with Rab38 and Rab32 proteins to mediate protein trafficking to lysosome-related organelles.", "journal": "The Journal of biological chemistry", "date": "2012", "authors": "Bultema JJ, Ambrosio AL, Burek CL, Di Pietro SM", "reference": { "type": "PubMed", "id": "22511774", "url": "https://pubmed.ncbi.nlm.nih.gov/22511774" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", 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"uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22511774", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 89 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, 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"field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Are Rab proteins the link between Golgi organization and membrane trafficking?", "journal": "Cellular and molecular life sciences : CMLS", "date": "2012", "authors": "Liu S, Storrie B", "reference": { "type": "PubMed", "id": "22581368", "url": "https://pubmed.ncbi.nlm.nih.gov/22581368" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N2H4-1", "protein_name": "Protein SYS1 homolog", "gene_name": "SYS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H115-1", "protein_name": "Beta-soluble NSF attachment protein", "gene_name": "NAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13795-1", "protein_name": "ADP-ribosylation factor-related protein 1", "gene_name": "ARFRP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40616-1", "protein_name": "ADP-ribosylation factor-like protein 1", "gene_name": "ARL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YS6-1", "protein_name": "Ras-related protein Rab-43", "gene_name": "RAB43", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MW5-1", "protein_name": "Conserved oligomeric Golgi complex subunit 8", "gene_name": "COG8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60499-1", "protein_name": "Syntaxin-10", "gene_name": "STX10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2V7-1", "protein_name": "Conserved oligomeric Golgi complex subunit 6", "gene_name": "COG6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15836-1", "protein_name": "Vesicle-associated membrane protein 3", "gene_name": "VAMP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92805-1", "protein_name": "Golgin subfamily A member 1", "gene_name": "GOLGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43493-2", "protein_name": "Trans-Golgi network integral membrane protein 2", "gene_name": "TGOLN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75379-1", "protein_name": "Vesicle-associated membrane protein 4", "gene_name": "VAMP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VIR6-4", "protein_name": "Vacuolar protein sorting-associated protein 53 homolog", "gene_name": "VPS53", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWJ2-1", "protein_name": "GRIP and coiled-coil domain-containing protein 2", "gene_name": "GCC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43752-1", "protein_name": "Syntaxin-6", "gene_name": "STX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRA0-1", "protein_name": "N-alpha-acetyltransferase 38, NatC auxiliary subunit", "gene_name": "NAA38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N1B4-1", "protein_name": "Vacuolar protein sorting-associated protein 52 homolog", "gene_name": "VPS52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53365-1", "protein_name": "Arfaptin-2", "gene_name": "ARFIP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13439-1", "protein_name": "Golgin subfamily A member 4", "gene_name": "GOLGA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WTW3-1", "protein_name": "Conserved oligomeric Golgi complex subunit 1", "gene_name": "COG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JB2-1", "protein_name": "Conserved oligomeric Golgi complex subunit 3", "gene_name": "COG3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9E3-1", "protein_name": "Conserved oligomeric Golgi complex subunit 4", "gene_name": "COG4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P83436-1", "protein_name": "Conserved oligomeric Golgi complex subunit 7", "gene_name": "COG7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14746-1", "protein_name": "Conserved oligomeric Golgi complex subunit 2", "gene_name": "COG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UP83-2", "protein_name": "Conserved oligomeric Golgi complex subunit 5", "gene_name": "COG5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94955-1", "protein_name": "Rho-related BTB domain-containing protein 3", "gene_name": "RHOBTB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q147X3-1", "protein_name": "N-alpha-acetyltransferase 30", "gene_name": "NAA30", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZE5-1", "protein_name": "N-alpha-acetyltransferase 35, NatC auxiliary subunit", "gene_name": "NAA35", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z6M1-1", "protein_name": "Rab9 effector protein with kelch motifs", "gene_name": "RABEPK", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UIL1-1", "protein_name": "Short coiled-coil protein", "gene_name": "SCOC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P1Q0-1", "protein_name": "Vacuolar protein sorting-associated protein 54", "gene_name": "VPS54", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UID3-1", "protein_name": "Vacuolar protein sorting-associated protein 51 homolog", "gene_name": "VPS51", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ9-2", "protein_name": "Vesicle transport through interaction with t-SNAREs homolog 1A", "gene_name": "VTI1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60664-1", "protein_name": "Perilipin-3", "gene_name": "PLIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P82094-1", "protein_name": "TATA element modulatory factor", "gene_name": "TMF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11717-1", "protein_name": "Cation-independent mannose-6-phosphate receptor", "gene_name": "IGF2R", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14662-1", "protein_name": "Syntaxin-16", "gene_name": "STX16", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20645-1", "protein_name": "Cation-dependent mannose-6-phosphate receptor", "gene_name": "M6PR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92738-1", "protein_name": "USP6 N-terminal-like protein", "gene_name": "USP6NL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96CN9-1", "protein_name": "GRIP and coiled-coil domain-containing protein 1", "gene_name": "GCC1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22581368", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 132 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { 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"protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 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"protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": 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"uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NBF6-1", "protein_name": "Late secretory pathway protein AVL9 homolog", "gene_name": "AVL9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22595670", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 90 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "TBC1D14 regulates autophagosome formation via Rab11- and ULK1-positive recycling endosomes.", "journal": "The Journal of cell biology", "date": "2012", "authors": "Longatti A, Lamb CA, Razi M, Yoshimura S, Barr FA, Tooze SA", "reference": { "type": "PubMed", "id": "22613832", "url": "https://pubmed.ncbi.nlm.nih.gov/22613832" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IYJ3-1", "protein_name": "Synaptotagmin-like protein 1", "gene_name": "SYTL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4KMP7-1", "protein_name": "TBC1 domain family member 10B", "gene_name": "TBC1D10B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": 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"uniprot_canonical_ac": "Q9ULP9-1", "protein_name": "TBC1 domain family member 24", "gene_name": "TBC1D24", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3MII6-1", "protein_name": "TBC1 domain family member 25", "gene_name": "TBC1D25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3P9-1", "protein_name": "Rab GTPase-activating protein 1", "gene_name": "RABGAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV04-1", "protein_name": "Carabin", "gene_name": "TBC1D10C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", 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"RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22622570", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 89 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Sbf/MTMR13 coordinates PI(3)P and Rab21 regulation in endocytic control of cellular remodeling.", "journal": "Molecular biology of the cell", "date": "2012", "authors": "Jean S, Cox S, Schmidt EJ, Robinson FL, Kiger A", "reference": { "type": "PubMed", "id": "22648168", "url": "https://pubmed.ncbi.nlm.nih.gov/22648168" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NW4-1", "protein_name": "Ankyrin repeat domain-containing protein 27", "gene_name": "ANKRD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q42-1", "protein_name": "Alsin", "gene_name": "ALS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y243-1", "protein_name": "RAC-gamma serine/threonine-protein kinase", "gene_name": "AKT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q61194-1", "protein_name": "Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha", "gene_name": "Pik3c2a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "E9PXF8-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "Sbf2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22648168", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 91 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The base of the cilium: roles for transition fibres and the transition zone in ciliary formation, maintenance and compartmentalization.", "journal": "EMBO reports", "date": "2012", "authors": "Reiter JF, Blacque OE, Leroux MR", "reference": { "type": "PubMed", "id": "22653444", "url": "https://pubmed.ncbi.nlm.nih.gov/22653444" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SQ7-1", "protein_name": "Serologically defined colon cancer antigen 8", "gene_name": "SDCCAG8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TAP6-1", "protein_name": "Centrosomal 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"TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62491-1", "protein_name": "Ras-related protein Rab-11A", "gene_name": "RAB11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BV73-1", "protein_name": "Centrosome-associated protein CEP250", "gene_name": "CEP250", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", 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"tax_name": "Human" }, { "uniprot_canonical_ac": "Q2MV58-1", "protein_name": "Tectonic-1", "gene_name": "TCTN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ6-1", "protein_name": "HAUS augmin-like complex subunit 3", "gene_name": "HAUS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75161-1", "protein_name": "Nephrocystin-4", "gene_name": "NPHP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IW35-1", "protein_name": "Centrosomal protein of 97 kDa", "gene_name": "CEP97", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00444-1", "protein_name": "Serine/threonine-protein kinase PLK4", "gene_name": "PLK4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC77-1", "protein_name": "Centrosomal P4.1-associated protein", "gene_name": "CPAP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NHQ1-1", "protein_name": "Centrosomal protein of 70 kDa", "gene_name": "CEP70", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61163-1", "protein_name": "Alpha-centractin", "gene_name": "ACTR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99996-2", "protein_name": "A-kinase anchor protein 9", "gene_name": "AKAP9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49674-1", "protein_name": "Casein kinase I isoform epsilon", "gene_name": "CSNK1E", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15691-1", "protein_name": "Microtubule-associated protein RP/EB family member 1", "gene_name": "MAPRE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCU4-1", "protein_name": "Centrosome-associated protein ALMS1", "gene_name": "ALMS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MT8-1", "protein_name": "Centrosomal protein of 63 kDa", "gene_name": "CEP63", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07900-1", "protein_name": "Heat shock protein HSP 90-alpha", "gene_name": "HSP90AA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96CS2-1", "protein_name": "HAUS augmin-like complex subunit 1", "gene_name": "HAUS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15259-1", "protein_name": "Nephrocystin-1", "gene_name": "NPHP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N157-1", "protein_name": "Jouberin", "gene_name": "AHI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BPU9-1", "protein_name": "B9 domain-containing protein 2", "gene_name": "B9D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPM9-1", "protein_name": "B9 domain-containing protein 1", "gene_name": "B9D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13561-1", "protein_name": "Dynactin subunit 2", "gene_name": "DCTN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23258-1", "protein_name": "Tubulin gamma-1 chain", "gene_name": "TUBG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4AC94-5", "protein_name": "C2 domain-containing protein 3", "gene_name": "C2CD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVX0-1", "protein_name": "HAUS augmin-like complex subunit 2", "gene_name": "HAUS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4H7-1", "protein_name": "HAUS augmin-like complex subunit 6", "gene_name": "HAUS6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15019-1", "protein_name": "Septin-2", "gene_name": "SEPTIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6D7-1", "protein_name": "HAUS augmin-like complex subunit 4", "gene_name": "HAUS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT25-1", "protein_name": "HAUS augmin-like complex subunit 8", "gene_name": "HAUS8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P209-1", "protein_name": "Centrosomal protein of 72 kDa", "gene_name": "CEP72", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75935-1", "protein_name": "Dynactin subunit 3", "gene_name": "DCTN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z460-1", "protein_name": "CLIP-associating protein 1", "gene_name": "CLASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5T7B8-1", "protein_name": "Kinesin-like protein KIF24", "gene_name": "KIF24", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14204-1", "protein_name": "Cytoplasmic dynein 1 heavy chain 1", "gene_name": "DYNC1H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43805-1", "protein_name": "Microtubule nucleation factor SSNA1", "gene_name": "SSNA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TES7-1", "protein_name": "Fas-binding factor 1", "gene_name": "FBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94927-1", "protein_name": "HAUS augmin-like complex subunit 5", "gene_name": "HAUS5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NHV4-1", "protein_name": "Protein NEDD1", "gene_name": "NEDD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5HYA8-1", "protein_name": "Meckelin", "gene_name": "TMEM67", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6NUS6-1", "protein_name": "Tectonic-3", "gene_name": "TCTN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0N5-1", "protein_name": "Transmembrane protein 216", "gene_name": "TMEM216", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61981-1", "protein_name": "14-3-3 protein gamma", "gene_name": "YWHAG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30153-1", "protein_name": "Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform", "gene_name": "PPP2R1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96L34-1", "protein_name": "MAP/microtubule affinity-regulating kinase 4", "gene_name": "MARK4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22653444", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 182 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structure, regulation and cellular functions of Rab geranylgeranyl transferase and its cellular partner Rab Escort Protein.", "journal": "Molecular membrane biology", "date": "2012", "authors": "Gutkowska M, Swiezewska E", "reference": { "type": "PubMed", "id": "22694141", "url": "https://pubmed.ncbi.nlm.nih.gov/22694141" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXH6-1", "protein_name": "Ras-related protein Rab-40A", "gene_name": "RAB40A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14088-1", "protein_name": "Ras-related protein Rab-33A", "gene_name": "RAB33A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULW5-1", "protein_name": "Ras-related protein Rab-26", "gene_name": "RAB26", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53611-1", "protein_name": "Geranylgeranyl transferase type-2 subunit beta", "gene_name": "RABGGTB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0T7-1", "protein_name": "Ras-related protein Rab-17", "gene_name": "RAB17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4Z0-2", "protein_name": "Ras-related protein Rab-42", "gene_name": "RAB42", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YS6-1", "protein_name": "Ras-related protein Rab-43", "gene_name": "RAB43", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62491-1", "protein_name": "Ras-related protein Rab-11A", "gene_name": "RAB11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92696-1", "protein_name": "Geranylgeranyl transferase type-2 subunit alpha", "gene_name": "RABGGTA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P59190-1", "protein_name": "Ras-related protein Rab-15", "gene_name": "RAB15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15771-1", "protein_name": "Ras-related protein Rab-30", "gene_name": "RAB30", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "A4D1S5-1", "protein_name": "Ras-related protein Rab-19", "gene_name": "RAB19", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95755-1", "protein_name": "Ras-related protein Rab-36", "gene_name": "RAB36", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57735-1", "protein_name": "Ras-related protein Rab-25", "gene_name": "RAB25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96E17-1", "protein_name": "Ras-related protein Rab-3C", "gene_name": "RAB3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULC3-1", "protein_name": "Ras-related protein Rab-23", "gene_name": "RAB23", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q969Q5-1", "protein_name": "Ras-related protein Rab-24", "gene_name": "RAB24", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z6P3-1", "protein_name": "Ras-related protein Rab-44", "gene_name": "RAB44", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95716-1", "protein_name": "Ras-related protein Rab-3D", "gene_name": "RAB3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20337-1", "protein_name": "Ras-related protein Rab-3B", "gene_name": "RAB3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NX57-1", "protein_name": "Ras-related protein Rab-20", "gene_name": "RAB20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": 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"uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61018-1", "protein_name": "Ras-related protein Rab-4B", "gene_name": "RAB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20338-1", "protein_name": "Ras-related protein Rab-4A", "gene_name": "RAB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WUD1-1", "protein_name": "Ras-related protein Rab-2B", "gene_name": "RAB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BZG1-1", "protein_name": "Ras-related protein Rab-34", "gene_name": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJY4-1", "protein_name": "ADP-ribosylation factor-binding protein GGA2", "gene_name": "GGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15907-1", "protein_name": "Ras-related protein Rab-11B", "gene_name": "RAB11B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H082-1", "protein_name": "Ras-related protein Rab-33B", "gene_name": "RAB33B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZP1-1", "protein_name": "TBC1 domain family member 3", "gene_name": "TBC1D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBP0-1", "protein_name": "TBC1 domain family member 16", "gene_name": "TBC1D16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULP9-1", "protein_name": "TBC1 domain family member 24", "gene_name": "TBC1D24", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3MII6-1", "protein_name": "TBC1 domain family member 25", "gene_name": "TBC1D25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3P9-1", "protein_name": "Rab GTPase-activating protein 1", "gene_name": "RABGAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV04-1", "protein_name": "Carabin", "gene_name": "TBC1D10C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BYX2-1", "protein_name": "TBC1 domain family member 2A", "gene_name": "TBC1D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61027-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "Rab10", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49815-1", "protein_name": "Tuberin", "gene_name": "TSC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXI6-1", "protein_name": "TBC1 domain family member 10A", "gene_name": "TBC1D10A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22762500", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 124 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "TBC1D7 is a third subunit of the TSC1-TSC2 complex upstream of mTORC1.", "journal": "Molecular cell", "date": "2012", "authors": "Dibble CC, Elis W, Menon S, Qin W, Klekota J, Asara JM, Finan PM, Kwiatkowski DJ, Murphy LO, Manning BD", "reference": { "type": "PubMed", "id": "22795129", "url": "https://pubmed.ncbi.nlm.nih.gov/22795129" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IYJ3-1", "protein_name": "Synaptotagmin-like protein 1", "gene_name": "SYTL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4KMP7-1", "protein_name": "TBC1 domain family member 10B", "gene_name": "TBC1D10B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14088-1", "protein_name": "Ras-related protein Rab-33A", "gene_name": "RAB33A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95166-1", "protein_name": "Gamma-aminobutyric acid receptor-associated protein", "gene_name": "GABARAP", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15276-1", "protein_name": "Rab GTPase-binding effector protein 1", "gene_name": "RABEP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62491-1", "protein_name": "Ras-related protein Rab-11A", "gene_name": "RAB11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HA65-1", "protein_name": "TBC1 domain family member 17", "gene_name": "TBC1D17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2M4-1", "protein_name": "TBC1 domain family member 14", "gene_name": "TBC1D14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92574-1", "protein_name": "Hamartin", "gene_name": "TSC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVG8-1", "protein_name": "TBC1 domain family member 13", "gene_name": "TBC1D13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0N9-1", "protein_name": "TBC1 domain family member 7", "gene_name": "TBC1D7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJY5-1", "protein_name": "ADP-ribosylation factor-binding protein GGA1", "gene_name": "GGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96CV9-1", "protein_name": "Optineurin", "gene_name": "OPTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60520-1", "protein_name": "Gamma-aminobutyric acid receptor-associated protein-like 2", "gene_name": "GABARAPL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZQ8-1", "protein_name": "Microtubule-associated protein 1 light chain 3 beta", "gene_name": "MAP1LC3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62330-1", "protein_name": "ADP-ribosylation factor 6", "gene_name": "ARF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20338-1", "protein_name": "Ras-related protein Rab-4A", "gene_name": "RAB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZ52-1", "protein_name": "ADP-ribosylation factor-binding protein GGA3", "gene_name": "GGA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TC07-1", "protein_name": "TBC1 domain family member 15", "gene_name": "TBC1D15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJY4-1", "protein_name": "ADP-ribosylation factor-binding protein GGA2", "gene_name": "GGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15907-1", "protein_name": "Ras-related protein Rab-11B", "gene_name": "RAB11B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H082-1", "protein_name": "Ras-related protein Rab-33B", "gene_name": "RAB33B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZP1-1", "protein_name": "TBC1 domain family member 3", "gene_name": "TBC1D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBP0-1", "protein_name": "TBC1 domain family member 16", "gene_name": "TBC1D16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULP9-1", "protein_name": "TBC1 domain family member 24", "gene_name": "TBC1D24", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3MII6-1", "protein_name": "TBC1 domain family member 25", "gene_name": "TBC1D25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3P9-1", "protein_name": "Rab GTPase-activating protein 1", "gene_name": "RABGAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV04-1", "protein_name": "Carabin", "gene_name": "TBC1D10C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BYX2-1", "protein_name": "TBC1 domain family member 2A", "gene_name": "TBC1D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49815-1", "protein_name": "Tuberin", "gene_name": "TSC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXI6-1", "protein_name": "TBC1 domain family member 10A", "gene_name": "TBC1D10A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9D0K0-1", "protein_name": "TBC1 domain family member 7", "gene_name": "Tbc1d7", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22795129", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 45 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Optineurin mediates a negative regulation of Rab8 by the GTPase-activating protein TBC1D17.", "journal": "Journal of cell science", "date": "2012", "authors": "Vaibhava V, Nagabhushana A, Chalasani ML, Sudhakar C, Kumari A, Swarup G", "reference": { "type": "PubMed", "id": "22854040", "url": "https://pubmed.ncbi.nlm.nih.gov/22854040" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IYJ3-1", "protein_name": "Synaptotagmin-like protein 1", "gene_name": "SYTL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4KMP7-1", "protein_name": "TBC1 domain family member 10B", "gene_name": "TBC1D10B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW1-1", "protein_name": "Ras-related protein Rab-6B", "gene_name": "RAB6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14088-1", "protein_name": "Ras-related protein Rab-33A", "gene_name": "RAB33A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95166-1", "protein_name": "Gamma-aminobutyric acid receptor-associated protein", "gene_name": "GABARAP", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75385-1", "protein_name": "Serine/threonine-protein kinase ULK1", "gene_name": "ULK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15276-1", "protein_name": 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"uniprot_canonical_ac": "Q9NVG8-1", "protein_name": "TBC1 domain family member 13", "gene_name": "TBC1D13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0N9-1", "protein_name": "TBC1 domain family member 7", "gene_name": "TBC1D7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJY5-1", "protein_name": "ADP-ribosylation factor-binding protein GGA1", "gene_name": "GGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96CV9-1", "protein_name": "Optineurin", "gene_name": "OPTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60520-1", "protein_name": "Gamma-aminobutyric acid receptor-associated protein-like 2", "gene_name": "GABARAPL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZQ8-1", "protein_name": "Microtubule-associated protein 1 light chain 3 beta", "gene_name": "MAP1LC3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62330-1", "protein_name": "ADP-ribosylation factor 6", "gene_name": "ARF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20338-1", "protein_name": "Ras-related protein Rab-4A", "gene_name": "RAB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZ52-1", "protein_name": "ADP-ribosylation factor-binding protein GGA3", "gene_name": "GGA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TC07-1", "protein_name": "TBC1 domain family member 15", "gene_name": "TBC1D15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJY4-1", "protein_name": "ADP-ribosylation factor-binding protein GGA2", "gene_name": "GGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15907-1", "protein_name": "Ras-related protein Rab-11B", "gene_name": "RAB11B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H082-1", "protein_name": "Ras-related protein Rab-33B", "gene_name": "RAB33B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZP1-1", "protein_name": "TBC1 domain family member 3", "gene_name": "TBC1D3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBP0-1", "protein_name": "TBC1 domain family member 16", "gene_name": "TBC1D16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULP9-1", "protein_name": "TBC1 domain family member 24", "gene_name": "TBC1D24", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3MII6-1", "protein_name": "TBC1 domain family member 25", "gene_name": "TBC1D25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3P9-1", "protein_name": "Rab GTPase-activating protein 1", "gene_name": "RABGAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV04-1", "protein_name": "Carabin", "gene_name": "TBC1D10C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BYX2-1", "protein_name": "TBC1 domain family member 2A", "gene_name": "TBC1D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49815-1", "protein_name": "Tuberin", "gene_name": "TSC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXI6-1", "protein_name": "TBC1 domain family member 10A", "gene_name": "TBC1D10A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 381, "end_pos": 381, "sequence_org": "R", "sequence_mut": "A", "comment": "Strongly decreased inhibition of Rab8-mediated transferrin receptor (TfR) endocytic trafficking; enhanced Rab8 localization on ERC tubules and Rab8 interaction with TfR; impaired inhibitory effect on autophagy.", "evidence": [ { "database": "UniProtKB", "id": "Q9HA65", "url": "https://www.uniprot.org/uniprotkb/Q9HA65" }, { "database": "PubMed", "id": "22854040", "url": "https://pubmed.ncbi.nlm.nih.gov/22854040" }, { "database": "PubMed", "id": "24752605", "url": "https://pubmed.ncbi.nlm.nih.gov/24752605" } ], "uniprot_canonical_ac": "Q9HA65-1" } ], "record_id": "pubmed.22854040", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 44 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Rab10 and myosin-Va mediate insulin-stimulated GLUT4 storage vesicle translocation in adipocytes.", "journal": "The Journal of cell biology", "date": "2012", "authors": "Chen Y, Wang Y, Zhang J, Deng Y, Jiang L, Song E, Wu XS, Hammer JA, Xu T, Lippincott-Schwartz J", "reference": { "type": "PubMed", "id": "22908308", "url": "https://pubmed.ncbi.nlm.nih.gov/22908308" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96AH8-1", "protein_name": "Ras-related protein Rab-7b", "gene_name": "RAB7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4ADV7-1", "protein_name": "Guanine nucleotide exchange factor subunit RIC1", "gene_name": "RIC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYP3-1", "protein_name": "Ras and Rab interactor 2", "gene_name": "RIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": 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"uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DA2-1", "protein_name": "Ras-related protein Rab-39B", "gene_name": "RAB39B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51159-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "RAB27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00194-1", "protein_name": "Ras-related protein Rab-27B", "gene_name": "RAB27B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQG7-1", "protein_name": "BLOC-3 complex member HPS4", "gene_name": "HPS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92902-1", "protein_name": "BLOC-3 complex member HPS1", "gene_name": "HPS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95248-1", "protein_name": "Myotubularin-related protein 5", "gene_name": "SBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13636-1", "protein_name": "Ras-related protein Rab-31", "gene_name": "RAB31", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", "protein_name": "Ras-related protein Rab-38", "gene_name": "RAB38", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92930-1", "protein_name": "Ras-related protein Rab-8B", "gene_name": "RAB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92546-1", "protein_name": "RAB6A-GEF complex partner protein 2", "gene_name": "RGP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZS11-1", "protein_name": "Ras and Rab interactor-like protein", "gene_name": "RINL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL25-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "RAB21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61020-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "RAB5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEH3-1", "protein_name": "DENN domain-containing protein 1A", "gene_name": "DENND1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13637-1", "protein_name": "Ras-related protein Rab-32", "gene_name": "RAB32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WG5-1", "protein_name": "Myotubularin-related protein 13", "gene_name": "SBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51151-1", "protein_name": "Ras-related protein Rab-9A", "gene_name": "RAB9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB24-1", "protein_name": "Ras and Rab interactor 3", "gene_name": "RIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RUS2-1", "protein_name": "DENN domain-containing protein 3", "gene_name": "DENND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61026-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "RAB10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ22-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "RAB12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51153-1", "protein_name": "Ras-related protein Rab-13", "gene_name": "RAB13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31749-1", "protein_name": "RAC-alpha serine/threonine-protein kinase", "gene_name": "AKT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I27-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "ALS2CL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31751-1", "protein_name": "RAC-beta serine/threonine-protein kinase", "gene_name": "AKT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20339-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "RAB5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99104-1", "protein_name": "Unconventional myosin-Va", "gene_name": "Myo5a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P61106-1", "protein_name": "Ras-related protein Rab-14", "gene_name": "RAB14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14C86-1", "protein_name": "GTPase-activating protein and VPS9 domain-containing protein 1", "gene_name": "GAPVD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31150-1", "protein_name": "Rab GDP dissociation inhibitor alpha", "gene_name": "GDI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14964-1", "protein_name": "Ras-related protein Rab-39A", "gene_name": "RAB39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZUT9-1", "protein_name": "DENN domain-containing protein 5B", "gene_name": "DENND5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG7-1", "protein_name": "Protein DENND6B", "gene_name": "DENND6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VZ89-1", "protein_name": "DENN domain-containing protein 4C", "gene_name": "DENND4C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75064-1", "protein_name": "DENN domain-containing protein 4B", "gene_name": "DENND4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68D51-1", "protein_name": "DENN domain-containing protein 2C", "gene_name": "DENND2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6A0-1", "protein_name": "DENN domain-containing protein 2D", "gene_name": "DENND2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4I1-1", "protein_name": "Unconventional myosin-Va", "gene_name": "MYO5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26374-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 2", "gene_name": "CHML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24386-1", "protein_name": "Rab proteins geranylgeranyltransferase component A 1", "gene_name": "CHM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15042-1", "protein_name": "Rab3 GTPase-activating protein catalytic subunit", "gene_name": "RAB3GAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51149-1", "protein_name": "Ras-related protein Rab-7a", "gene_name": "RAB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP72-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "RAB18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2M9-1", "protein_name": "Rab3 GTPase-activating protein non-catalytic subunit", "gene_name": "RAB3GAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP90-1", "protein_name": "Ras-related protein Rab-9B", "gene_name": "RAB9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78524-1", "protein_name": "DENN domain-containing protein 2B", "gene_name": "DENND2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ41-2", "protein_name": "Rab5 GDP/GTP exchange factor", "gene_name": "RABGEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBN0-1", "protein_name": "Guanine nucleotide exchange factor for Rab-3A", "gene_name": "RAB3IL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ26-1", "protein_name": "DENN domain-containing protein 5A", "gene_name": "DENND5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3S1-1", "protein_name": "DENN domain-containing protein 1B", "gene_name": "DENND1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWF6-1", "protein_name": "Protein DENND6A", "gene_name": "DENND6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51148-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "RAB5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50395-1", "protein_name": "Rab GDP dissociation inhibitor beta", "gene_name": "GDI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20336-1", "protein_name": "Ras-related protein Rab-3A", "gene_name": "RAB3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L1V2-1", "protein_name": "Vacuolar fusion protein MON1 homolog B", "gene_name": "MON1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VX9-1", "protein_name": "Vacuolar fusion protein MON1 homolog A", "gene_name": "MON1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15286-1", "protein_name": "Ras-related protein Rab-35", "gene_name": "RAB35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z401-1", "protein_name": "C-myc promoter-binding protein", "gene_name": "DENND4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60343-1", "protein_name": "TBC1 domain family member 4", "gene_name": "TBC1D4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61027-1", "protein_name": "Ras-related protein Rab-10", "gene_name": "Rab10", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13671-1", "protein_name": "Ras and Rab interactor 1", "gene_name": "RIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62258-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "YWHAE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96AH8", "url": "https://www.uniprot.org/uniprotkb/Q96AH8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22908308", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 93 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] } ]