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"Involvement of 90-kuD ribosomal S6 kinase in collagen type I expression in rat hepatic fibrosis.", "journal": "World journal of gastroenterology", "date": "2009", "authors": "Yang MF, Xie J, Gu XY, Zhang XH, Davey AK, Zhang SJ, Wang JP, Zhu RM", "reference": { "type": "PubMed", "id": "19418583", "url": "https://pubmed.ncbi.nlm.nih.gov/19418583" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "F1M7N7-1", "protein_name": "Ribosomal protein S6 kinase", "gene_name": "Rps6ka2", "tax_name": "Rat" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "F1M7N7", "url": "https://www.uniprot.org/uniprotkb/F1M7N7" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.19418583", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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"Long-chain acyl-CoA synthetase isoforms differ in preferences for eicosanoid species and long-chain fatty acids.", "journal": "Journal of lipid research", "date": "2017-05", "authors": "Klett Eric L, Chen Shufen, Yechoor Alekhya, Lih Fred B, Coleman Rosalind A", "reference": { "type": "PubMed", "id": "28209804", "url": "https://pubmed.ncbi.nlm.nih.gov/28209804" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O35547-1", "protein_name": "Long-chain-fatty-acid--CoA ligase 4", "gene_name": "Acsl4", "tax_name": "Rat" }, { "uniprot_canonical_ac": "O88813-1", "protein_name": "Long-chain-fatty-acid--CoA ligase 5", "gene_name": "Acsl5", "tax_name": "Rat" }, { "uniprot_canonical_ac": "P33124-1", "protein_name": "Long-chain-fatty-acid--CoA ligase 6", "gene_name": "Acsl6", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q63151-1", "protein_name": "Fatty acid CoA ligase Acsl3", "gene_name": "Acsl3", "tax_name": "Rat" }, { "uniprot_canonical_ac": "P18163-1", 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"date": "2021", "authors": "Qu XF, Liang TY, Wu DG, Lai NS, Deng RM, Ma C, Li X, Li HY, Liu YZ, Shen HT, Chen G", "reference": { "type": "PubMed", "id": "33314758", "url": "https://pubmed.ncbi.nlm.nih.gov/33314758" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O35547-1", "protein_name": "Long-chain-fatty-acid--CoA ligase 4", "gene_name": "Acsl4", "tax_name": "Rat" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "O35547", "url": "https://www.uniprot.org/uniprotkb/O35547" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.33314758", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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Jinfu, Tang Jianping, Zhang Chenran, Li Guilin, Lin Xinpei, Liao Sining, Luo Jinying, Yu Guangxia, Zheng Fuli, Guo Zhenkun, Shao Wenya, Hu Hong, Xu Liangpu, Wu Siying, Li Huangyuan", "reference": { "type": "PubMed", "id": "38734267", "url": "https://pubmed.ncbi.nlm.nih.gov/38734267" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O35547-1", "protein_name": "Long-chain-fatty-acid--CoA ligase 4", "gene_name": "Acsl4", "tax_name": "Rat" }, { "uniprot_canonical_ac": "D3ZKD3-1", "protein_name": "RNA demethylase ALKBH5", "gene_name": "Alkbh5", "tax_name": "Rat" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "O35547", "url": "https://www.uniprot.org/uniprotkb/O35547" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.38734267", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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airway smooth muscle cells are highly correlated in ovalbumin-sensitized rats.", "journal": "Molecular medicine reports", "date": "2013-10", "authors": "Lin Feng, Song Aijing, Wu Jiamin, Jiang Xuemei, Long Jiaoyue, Chen Jun, Duan Yiyuan, Shi Yanling, Deng Linhong", "reference": { "type": "PubMed", "id": "23934418", "url": "https://pubmed.ncbi.nlm.nih.gov/23934418" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "F1M8J6-1", "protein_name": "ADAM metallopeptidase domain 33", "gene_name": "Adam33", "tax_name": "Rat" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "F1M8J6", "url": "https://www.uniprot.org/uniprotkb/F1M8J6" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.23934418", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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prothrombinase in cardiac microvascular endothelial cells of rats with type 2 diabetes.", "journal": "Journal of Huazhong University of Science and Technology. 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"The histone demethylase KDM5A is required for the repression of astrocytogenesis and regulated by the translational machinery in neural progenitor cells.", "journal": "FASEB journal : official publication of the Federation of American Societies for Experimental Biology", "date": "2018", "authors": "Kong SY, Kim W, Lee HR, Kim HJ", "reference": { "type": "PubMed", "id": "29212818", "url": "https://pubmed.ncbi.nlm.nih.gov/29212818" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A096MJZ8-1", "protein_name": "Lysine-specific demethylase 5A", "gene_name": "Kdm5a", "tax_name": "Rat" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "A0A096MJZ8", "url": "https://www.uniprot.org/uniprotkb/A0A096MJZ8" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.29212818", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Constitutive expression of IL-18 and IL-18R in differentiated IEC-6 cells: effect of TNF-alpha and IFN-gamma treatment.", "journal": "Journal of interferon & cytokine research : the official journal of the International Society for Interferon and Cytokine Research", "date": "2008-05", "authors": "Kolinska Jirina, Lisa Vera, Clark Jessica A, Kozakova Hana, Zakostelecka Marie, Khailova Ludmila, Sinkora Marek, Kitanovicova Andrea, Dvorak Bohuslav", "reference": { "type": "PubMed", "id": "18547159", "url": "https://pubmed.ncbi.nlm.nih.gov/18547159" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A0G2K2K7-1", "protein_name": "Interleukin-18 receptor accessory protein", "gene_name": "Il18rap", "tax_name": "Rat" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "A0A0G2K2K7", "url": 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Abeta upregulates and colocalizes with LGI3 in cultured rat astrocytes.", "journal": "Cellular and molecular neurobiology", "date": "2007", "authors": "Kimura N, Ishii Y, Suzaki S, Negishi T, Kyuwa S, Yoshikawa Y", "reference": { "type": "PubMed", "id": "17387609", "url": "https://pubmed.ncbi.nlm.nih.gov/17387609" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "D3ZN61-1", "protein_name": "Leucine-rich repeat LGI family, member 3", "gene_name": "Lgi3", "tax_name": "Rat" }, { "uniprot_canonical_ac": "P61266-1", "protein_name": "Syntaxin-1B", "gene_name": "STX1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60359-1", "protein_name": "Voltage-dependent calcium channel gamma-3 subunit", "gene_name": "CACNG3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBN1-1", "protein_name": "Voltage-dependent calcium channel gamma-4 subunit", "gene_name": "CACNG4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y698-1", "protein_name": "Voltage-dependent calcium channel gamma-2 subunit", "gene_name": "CACNG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N0V4-1", "protein_name": "Leucine-rich repeat LGI family member 2", "gene_name": "LGI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78352-1", "protein_name": "Disks large homolog 4", "gene_name": "DLG4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95970-1", "protein_name": "Leucine-rich glioma-inactivated protein 1", "gene_name": "LGI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N145-1", "protein_name": "Leucine-rich repeat LGI family member 3", "gene_name": "LGI3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0K1-1", "protein_name": "Disintegrin and metalloproteinase domain-containing protein 22", "gene_name": "ADAM22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16623-1", "protein_name": "Syntaxin-1A", "gene_name": "STX1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXS5-1", "protein_name": "Voltage-dependent calcium channel gamma-8 subunit", "gene_name": 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"count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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