[ { "title": "Specific inhibition of type I and type II collagen fibrillogenesis by the small proteoglycan of tendon.", "journal": "The Biochemical journal", "date": "1984", "authors": "Vogel KG, Paulsson M, Heinegard D", "reference": { "type": "PubMed", "id": "6439184", "url": "https://pubmed.ncbi.nlm.nih.gov/6439184" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02452-1", "protein_name": "Collagen alpha-1(I) chain", "gene_name": "COL1A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18084-1", "protein_name": "Integrin beta-5", "gene_name": "ITGB5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00468-1", "protein_name": "Agrin", "gene_name": "AGRN", "tax_name": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "O15146-1", "protein_name": "Muscle, skeletal receptor tyrosine-protein kinase", "gene_name": "MUSK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13332-1", "protein_name": "Receptor-type tyrosine-protein phosphatase S", "gene_name": "PTPRS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20702-1", "protein_name": "Integrin alpha-X", "gene_name": "ITGAX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17301-1", "protein_name": "Integrin alpha-2", "gene_name": "ITGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15232-1", "protein_name": "Matrilin-3", "gene_name": "MATN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22105-3", "protein_name": "Tenascin-X", "gene_name": "TNXB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13591-2", "protein_name": "Neural cell adhesion molecule 1", "gene_name": "NCAM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13316-1", "protein_name": "Dentin matrix acidic 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"name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.6439184", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 76 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "The tricho-rhino-phalangeal syndrome with exostoses (or Langer-Giedion syndrome): four additional patients without mental retardation and review of the literature.", "journal": "American journal of medical genetics", "date": "1984", "authors": "Langer LO Jr, Krassikoff N, Laxova R, Scheer-Williams M, Lutter LD, Gorlin RJ, Jennings CG, Day DW", "reference": { "type": "PubMed", "id": "6496574", "url": "https://pubmed.ncbi.nlm.nih.gov/6496574" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75056-1", "protein_name": "Syndecan-3", "gene_name": "SDC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00468-1", "protein_name": "Agrin", "gene_name": "AGRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51654-1", "protein_name": 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factor Va and factor VaR506Q by activated protein C.", "journal": "The Journal of biological chemistry", "date": "1995", "authors": "Rosing J, Hoekema L, Nicolaes GA, Thomassen MC, Hemker HC, Varadi K, Schwarz HP, Tans G", "reference": { "type": "PubMed", "id": "7499257", "url": "https://pubmed.ncbi.nlm.nih.gov/7499257" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75056-1", "protein_name": "Syndecan-3", "gene_name": "SDC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07204-1", "protein_name": "Thrombomodulin", "gene_name": "THBD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00734-1", "protein_name": "Prothrombin", "gene_name": "F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4KMQ2-1", "protein_name": "Anoctamin-6", "gene_name": "ANO6", "tax_name": "Human" }, { 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"uniprot_canonical_ac": "P24158-1", "protein_name": "Myeloblastin", "gene_name": "PRTN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25116-1", "protein_name": "Proteinase-activated receptor 1", "gene_name": "F2R", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18827-1", "protein_name": "Syndecan-1", "gene_name": "SDC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04275-1", "protein_name": "von Willebrand factor", "gene_name": "VWF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17405-1", "protein_name": "Sphingomyelin phosphodiesterase", "gene_name": "SMPD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76LX8-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 13", "gene_name": "ADAMTS13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6Q3-1", "protein_name": "CD177 antigen", "gene_name": "CD177", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31431-1", "protein_name": "Syndecan-4", "gene_name": "SDC4", "tax_name": 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"table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { 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"total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Solid-phase von Willebrand factor contains a conformationally active RGD motif that mediates endothelial cell adhesion through the alpha v beta 3 receptor.", "journal": "Blood", "date": "1993", "authors": "Denis C, Williams JA, Lu X, Meyer D, Baruch D", "reference": { "type": "PubMed", "id": "7505120", "url": "https://pubmed.ncbi.nlm.nih.gov/7505120" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": 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"COL8A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08572-1", "protein_name": "Collagen alpha-2(IV) chain", "gene_name": "COL4A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25067-1", "protein_name": "Collagen alpha-2(VIII) chain", "gene_name": "COL8A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20849-1", "protein_name": "Collagen alpha-1(IX) chain", "gene_name": "COL9A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25940-1", "protein_name": "Collagen alpha-3(V) chain", "gene_name": "COL5A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01955-1", "protein_name": "Collagen alpha-3(IV) chain", "gene_name": "COL4A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16284-1", "protein_name": "Platelet endothelial cell adhesion molecule", "gene_name": "PECAM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35968-1", "protein_name": "Vascular endothelial growth factor receptor 2", "gene_name": "KDR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13683-1", "protein_name": "Integrin alpha-7", "gene_name": "ITGA7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18564-1", "protein_name": "Integrin beta-6", "gene_name": "ITGB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11215-1", "protein_name": "Integrin alpha-M", "gene_name": "ITGAM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26006-2", "protein_name": "Integrin alpha-3", "gene_name": "ITGA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08514-1", "protein_name": "Integrin alpha-IIb", "gene_name": "ITGA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38570-1", "protein_name": "Integrin alpha-E", "gene_name": "ITGAE", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75578-1", "protein_name": "Integrin alpha-10", "gene_name": "ITGA10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06756-1", "protein_name": "Integrin alpha-V", "gene_name": "ITGAV", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53708-1", "protein_name": "Integrin alpha-8", "gene_name": "ITGA8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13349-1", "protein_name": "Integrin alpha-D", "gene_name": "ITGAD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKX5-1", "protein_name": "Integrin alpha-11", "gene_name": "ITGA11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08648-1", "protein_name": "Integrin alpha-5", "gene_name": "ITGA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13612-1", "protein_name": "Integrin alpha-4", "gene_name": "ITGA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05556-1", "protein_name": "Integrin beta-1", "gene_name": "ITGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02461-1", "protein_name": "Collagen alpha-1(III) chain", "gene_name": "COL3A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07092-1", "protein_name": "Collagen alpha-1(XVI) chain", "gene_name": "COL16A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29400-1", "protein_name": "Collagen alpha-5(IV) chain", "gene_name": "COL4A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14055-1", "protein_name": "Collagen alpha-2(IX) chain", "gene_name": "COL9A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8TX70-1", "protein_name": "Collagen alpha-5(VI) chain", "gene_name": "COL6A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05997-1", "protein_name": "Collagen alpha-2(V) chain", "gene_name": "COL5A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NMZ7-1", "protein_name": "Collagen alpha-6(VI) chain", "gene_name": "COL6A6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12111-1", "protein_name": "Collagen alpha-3(VI) chain", "gene_name": "COL6A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5TAT6-1", "protein_name": "Collagen alpha-1(XIII) chain", "gene_name": "COL13A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08123-1", "protein_name": "Collagen alpha-2(I) chain", "gene_name": "COL1A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12109-1", "protein_name": "Collagen alpha-1(VI) chain", "gene_name": "COL6A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02458-2", "protein_name": "Collagen alpha-1(II) chain", "gene_name": "COL2A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14050-1", "protein_name": "Collagen alpha-3(IX) chain", "gene_name": "COL9A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02675-1", "protein_name": "Fibrinogen beta chain", "gene_name": "FGB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26010-1", "protein_name": "Integrin beta-7", "gene_name": "ITGB7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05106-1", "protein_name": "Integrin beta-3", "gene_name": "ITGB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q03692-1", "protein_name": "Collagen alpha-1(X) chain", "gene_name": "COL10A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12830-1", "protein_name": "Cadherin-1", "gene_name": "CDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04004-1", "protein_name": "Vitronectin", "gene_name": "VTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23229-1", "protein_name": "Integrin alpha-6", "gene_name": "ITGA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14773-1", "protein_name": "Intercellular adhesion molecule 4", "gene_name": "ICAM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13797-1", "protein_name": "Integrin alpha-9", "gene_name": "ITGA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32942-1", "protein_name": "Intercellular adhesion molecule 3", "gene_name": "ICAM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMF0-1", "protein_name": "Intercellular adhesion molecule 5", "gene_name": "ICAM5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20702-1", "protein_name": "Integrin alpha-X", "gene_name": "ITGAX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BX67-1", "protein_name": "Junctional adhesion molecule C", "gene_name": "JAM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17301-1", "protein_name": "Integrin alpha-2", "gene_name": "ITGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57087-1", "protein_name": "Junctional adhesion molecule B", "gene_name": "JAM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26012-1", "protein_name": "Integrin beta-8", "gene_name": "ITGB8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56199-1", "protein_name": "Integrin alpha-1", "gene_name": "ITGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19320-1", "protein_name": "Vascular cell adhesion protein 1", "gene_name": "VCAM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35555-1", "protein_name": "Fibrillin-1", "gene_name": "FBN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13598-1", "protein_name": "Intercellular adhesion molecule 2", "gene_name": "ICAM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24821-1", "protein_name": "Tenascin", "gene_name": "TNC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39060-3", "protein_name": "Collagen alpha-1(XVIII) chain", "gene_name": "COL18A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05107-1", "protein_name": "Integrin beta-2", "gene_name": "ITGB2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7505120", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 84 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Integrin alpha v beta 8. Interaction with vitronectin and functional divergence of the beta 8 cytoplasmic domain.", "journal": "The Journal of biological chemistry", "date": "1994", "authors": "Nishimura SL, Sheppard D, Pytela R", "reference": { "type": "PubMed", "id": "7525578", "url": "https://pubmed.ncbi.nlm.nih.gov/7525578" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02452-1", "protein_name": "Collagen alpha-1(I) chain", "gene_name": "COL1A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18084-1", "protein_name": "Integrin beta-5", "gene_name": "ITGB5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02671-1", "protein_name": "Fibrinogen alpha chain", "gene_name": "FGA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00468-1", "protein_name": "Agrin", "gene_name": "AGRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02751-15", "protein_name": "Fibronectin", "gene_name": "FN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08722-1", "protein_name": "Leukocyte surface antigen CD47", "gene_name": "CD47", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53420-1", "protein_name": "Collagen alpha-4(IV) chain", "gene_name": "COL4A4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02679-1", "protein_name": "Fibrinogen gamma chain", "gene_name": "FGG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86Y22-1", "protein_name": "Collagen alpha-1(XXIII) chain", "gene_name": "COL23A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20701-1", "protein_name": "Integrin alpha-L", "gene_name": "ITGAL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05362-1", "protein_name": "Intercellular adhesion molecule 1", "gene_name": "ICAM1", "tax_name": 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"protein_name": "Intercellular adhesion molecule 4", "gene_name": "ICAM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13797-1", "protein_name": "Integrin alpha-9", "gene_name": "ITGA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32942-1", "protein_name": "Intercellular adhesion molecule 3", "gene_name": "ICAM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMF0-1", "protein_name": "Intercellular adhesion molecule 5", "gene_name": "ICAM5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20702-1", "protein_name": "Integrin alpha-X", "gene_name": "ITGAX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BX67-1", "protein_name": "Junctional adhesion molecule C", "gene_name": "JAM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17301-1", "protein_name": "Integrin alpha-2", "gene_name": "ITGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57087-1", "protein_name": "Junctional adhesion molecule B", "gene_name": "JAM2", "tax_name": "Human" }, { 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"name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7525578", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 84 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Tenascin-R (J1 160/180 inhibits fibronectin-mediated cell adhesion--functional relatedness to tenascin-C.", "journal": "Journal of cell science", "date": "1994", "authors": "Pesheva P, Probstmeier R, Skubitz AP, McCarthy JB, Furcht LT, Schachner M", "reference": { "type": "PubMed", "id": "7527058", "url": "https://pubmed.ncbi.nlm.nih.gov/7527058" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02452-1", "protein_name": "Collagen alpha-1(I) chain", "gene_name": "COL1A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18084-1", "protein_name": "Integrin beta-5", "gene_name": "ITGB5", "tax_name": "Human" }, { 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{ "uniprot_canonical_ac": "Q96GW7-1", "protein_name": "Brevican core protein", "gene_name": "BCAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15146-1", "protein_name": "Muscle, skeletal receptor tyrosine-protein kinase", "gene_name": "MUSK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13332-1", "protein_name": "Receptor-type tyrosine-protein phosphatase S", "gene_name": "PTPRS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20702-1", "protein_name": "Integrin alpha-X", "gene_name": "ITGAX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17301-1", "protein_name": "Integrin alpha-2", "gene_name": "ITGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15232-1", "protein_name": "Matrilin-3", "gene_name": "MATN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22105-3", "protein_name": "Tenascin-X", "gene_name": "TNXB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13591-2", "protein_name": "Neural cell adhesion molecule 1", "gene_name": "NCAM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13316-1", "protein_name": "Dentin matrix acidic phosphoprotein 1", "gene_name": "DMP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55268-1", "protein_name": "Laminin subunit beta-2", "gene_name": "LAMB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24821-1", "protein_name": "Tenascin", "gene_name": "TNC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14594-1", "protein_name": "Neurocan core protein", "gene_name": "NCAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05067-1", "protein_name": "Amyloid-beta precursor protein", "gene_name": "APP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01137-1", "protein_name": "Transforming growth factor beta-1 proprotein", "gene_name": "TGFB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61812-1", "protein_name": "Transforming growth factor beta-2 proprotein", "gene_name": "TGFB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05121-1", "protein_name": "Plasminogen activator inhibitor 1", "gene_name": "SERPINE1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7527058", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 76 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Nitric oxide in skeletal muscle.", "journal": "Nature", "date": "1994", "authors": "Kobzik L, Reid MB, Bredt DS, Stamler JS", "reference": { "type": "PubMed", "id": "7527495", "url": "https://pubmed.ncbi.nlm.nih.gov/7527495" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43556-1", "protein_name": "Epsilon-sarcoglycan", "gene_name": "SGCE", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00468-1", "protein_name": "Agrin", "gene_name": "AGRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16585-1", "protein_name": "Beta-sarcoglycan", "gene_name": "SGCB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14714-1", "protein_name": "Sarcospan", "gene_name": "SSPN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16586-1", "protein_name": "Alpha-sarcoglycan", "gene_name": "SGCA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LD1-1", "protein_name": "Zeta-sarcoglycan", "gene_name": "SGCZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92629-1", "protein_name": "Delta-sarcoglycan", "gene_name": "SGCD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14118-1", "protein_name": "Dystroglycan 1", "gene_name": "DAG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07942-1", "protein_name": "Laminin subunit beta-1", "gene_name": "LAMB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24043-1", "protein_name": "Laminin subunit alpha-2", "gene_name": "LAMA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25391-1", "protein_name": "Laminin subunit alpha-1", "gene_name": "LAMA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6N6-1", "protein_name": "Laminin subunit gamma-3", "gene_name": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4J8-1", "protein_name": "Dystrobrevin alpha", "gene_name": "DTNA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63267-1", "protein_name": "Actin, gamma-enteric smooth muscle", "gene_name": "ACTG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68032-1", "protein_name": "Actin, alpha cardiac muscle 1", "gene_name": "ACTC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13884-1", "protein_name": "Beta-1-syntrophin", "gene_name": "SNTB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13424-1", "protein_name": "Alpha-1-syntrophin", "gene_name": "SNTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13326-1", "protein_name": "Gamma-sarcoglycan", "gene_name": "SGCG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63261-1", "protein_name": "Actin, cytoplasmic 2", "gene_name": "ACTG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62736-1", "protein_name": "Actin, aortic smooth muscle", "gene_name": "ACTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11532-1", "protein_name": "Dystrophin", "gene_name": "DMD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13425-1", "protein_name": "Beta-2-syntrophin", "gene_name": "SNTB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13474-1", "protein_name": "Dystrophin-related protein 2", "gene_name": "DRP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55268-1", "protein_name": "Laminin subunit beta-2", "gene_name": "LAMB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60941-1", "protein_name": "Dystrobrevin beta", "gene_name": "DTNB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68133-1", "protein_name": "Actin, alpha skeletal muscle", "gene_name": "ACTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7527495", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 36 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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interactions of embryonic chick motor and sensory neurons with tenascin-C.", "journal": "Neuron", "date": "1995", "authors": "Varnum-Finney B, Venstrom K, Muller U, Kypta R, Backus C, Chiquet M, Reichardt LF", "reference": { "type": "PubMed", "id": "7541634", "url": "https://pubmed.ncbi.nlm.nih.gov/7541634" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02452-1", "protein_name": "Collagen alpha-1(I) chain", "gene_name": "COL1A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18084-1", "protein_name": "Integrin beta-5", "gene_name": "ITGB5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02671-1", "protein_name": "Fibrinogen alpha chain", "gene_name": "FGA", "tax_name": 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"protein_name": "Integrin alpha-3", "gene_name": "ITGA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08514-1", "protein_name": "Integrin alpha-IIb", "gene_name": "ITGA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38570-1", "protein_name": "Integrin alpha-E", "gene_name": "ITGAE", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75578-1", "protein_name": "Integrin alpha-10", "gene_name": "ITGA10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06756-1", "protein_name": "Integrin alpha-V", "gene_name": "ITGAV", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53708-1", "protein_name": "Integrin alpha-8", "gene_name": "ITGA8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13349-1", "protein_name": "Integrin alpha-D", "gene_name": "ITGAD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKX5-1", "protein_name": "Integrin alpha-11", "gene_name": "ITGA11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08648-1", "protein_name": "Integrin alpha-5", "gene_name": "ITGA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13612-1", "protein_name": "Integrin alpha-4", "gene_name": "ITGA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05556-1", "protein_name": "Integrin beta-1", "gene_name": "ITGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02461-1", "protein_name": "Collagen alpha-1(III) chain", "gene_name": "COL3A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07092-1", "protein_name": "Collagen alpha-1(XVI) chain", "gene_name": "COL16A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29400-1", "protein_name": "Collagen alpha-5(IV) chain", "gene_name": "COL4A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14055-1", "protein_name": "Collagen alpha-2(IX) chain", "gene_name": "COL9A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8TX70-1", "protein_name": "Collagen alpha-5(VI) chain", "gene_name": "COL6A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05997-1", "protein_name": "Collagen alpha-2(V) chain", "gene_name": "COL5A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NMZ7-1", "protein_name": "Collagen alpha-6(VI) chain", "gene_name": "COL6A6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12111-1", "protein_name": "Collagen alpha-3(VI) chain", "gene_name": "COL6A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5TAT6-1", "protein_name": "Collagen alpha-1(XIII) chain", "gene_name": "COL13A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08123-1", "protein_name": "Collagen alpha-2(I) chain", "gene_name": "COL1A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12109-1", "protein_name": "Collagen alpha-1(VI) chain", "gene_name": "COL6A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02458-2", "protein_name": "Collagen alpha-1(II) chain", "gene_name": "COL2A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14050-1", "protein_name": "Collagen alpha-3(IX) chain", "gene_name": "COL9A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02675-1", "protein_name": "Fibrinogen beta chain", "gene_name": "FGB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26010-1", "protein_name": "Integrin beta-7", "gene_name": "ITGB7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05106-1", "protein_name": "Integrin beta-3", "gene_name": "ITGB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q03692-1", "protein_name": "Collagen alpha-1(X) chain", "gene_name": "COL10A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12830-1", "protein_name": "Cadherin-1", "gene_name": "CDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04004-1", "protein_name": "Vitronectin", "gene_name": "VTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23229-1", "protein_name": "Integrin alpha-6", "gene_name": "ITGA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14773-1", "protein_name": "Intercellular adhesion molecule 4", "gene_name": "ICAM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13797-1", "protein_name": "Integrin alpha-9", "gene_name": "ITGA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32942-1", "protein_name": "Intercellular adhesion molecule 3", "gene_name": "ICAM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMF0-1", "protein_name": "Intercellular adhesion molecule 5", "gene_name": "ICAM5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20702-1", "protein_name": "Integrin alpha-X", "gene_name": "ITGAX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BX67-1", "protein_name": "Junctional adhesion molecule C", "gene_name": "JAM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17301-1", "protein_name": "Integrin alpha-2", "gene_name": "ITGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57087-1", "protein_name": "Junctional adhesion molecule B", "gene_name": "JAM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26012-1", "protein_name": "Integrin beta-8", "gene_name": "ITGB8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56199-1", "protein_name": "Integrin alpha-1", "gene_name": "ITGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26009-1", "protein_name": "Integrin alpha-8", "gene_name": "ITGA8", "tax_name": "Chicken" }, { "uniprot_canonical_ac": "P19320-1", "protein_name": "Vascular cell adhesion protein 1", "gene_name": "VCAM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35555-1", "protein_name": "Fibrillin-1", "gene_name": "FBN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13598-1", "protein_name": "Intercellular adhesion molecule 2", "gene_name": "ICAM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24821-1", "protein_name": "Tenascin", "gene_name": "TNC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39060-3", "protein_name": "Collagen alpha-1(XVIII) chain", "gene_name": "COL18A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05107-1", "protein_name": "Integrin beta-2", "gene_name": "ITGB2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7541634", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 85 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "CD31/PECAM-1 is a ligand for alpha v beta 3 integrin involved in adhesion of leukocytes to endothelium.", "journal": "The Journal of cell biology", "date": "1995", "authors": "Piali L, Hammel P, Uherek C, Bachmann F, Gisler RH, Dunon D, Imhof BA", "reference": { "type": "PubMed", "id": "7542249", "url": "https://pubmed.ncbi.nlm.nih.gov/7542249" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02452-1", "protein_name": "Collagen alpha-1(I) chain", "gene_name": "COL1A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18084-1", "protein_name": "Integrin beta-5", "gene_name": "ITGB5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02671-1", "protein_name": "Fibrinogen alpha chain", "gene_name": "FGA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00468-1", "protein_name": "Agrin", "gene_name": "AGRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02751-15", "protein_name": "Fibronectin", "gene_name": "FN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08722-1", "protein_name": "Leukocyte surface antigen CD47", "gene_name": "CD47", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53420-1", "protein_name": "Collagen alpha-4(IV) chain", "gene_name": "COL4A4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02679-1", "protein_name": "Fibrinogen gamma chain", "gene_name": "FGG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86Y22-1", "protein_name": "Collagen alpha-1(XXIII) chain", "gene_name": "COL23A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20701-1", "protein_name": "Integrin alpha-L", "gene_name": "ITGAL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05362-1", "protein_name": "Intercellular adhesion molecule 1", "gene_name": "ICAM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y624-1", "protein_name": "Junctional adhesion molecule A", "gene_name": "F11R", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35613-1", "protein_name": "Basigin", "gene_name": "BSG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21815-1", "protein_name": "Integrin-binding sialoprotein", "gene_name": "IBSP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49747-1", "protein_name": "Cartilage oligomeric matrix protein", "gene_name": "COMP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04275-1", "protein_name": "von Willebrand factor", "gene_name": "VWF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07996-1", "protein_name": "Thrombospondin-1", "gene_name": "THBS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16070-1", "protein_name": "CD44 antigen", "gene_name": "CD44", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10451-1", "protein_name": "Osteopontin", "gene_name": "SPP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12110-1", "protein_name": "Collagen alpha-2(VI) chain", "gene_name": "COL6A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14031-1", "protein_name": "Collagen alpha-6(IV) chain", "gene_name": "COL4A6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20908-1", "protein_name": "Collagen alpha-1(V) chain", "gene_name": "COL5A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02462-1", "protein_name": "Collagen alpha-1(IV) chain", "gene_name": "COL4A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27658-1", "protein_name": "Collagen alpha-1(VIII) chain", "gene_name": "COL8A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08572-1", "protein_name": "Collagen alpha-2(IV) chain", "gene_name": "COL4A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25067-1", "protein_name": "Collagen alpha-2(VIII) chain", "gene_name": "COL8A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20849-1", "protein_name": "Collagen alpha-1(IX) chain", "gene_name": "COL9A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25940-1", "protein_name": "Collagen alpha-3(V) chain", "gene_name": "COL5A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01955-1", "protein_name": "Collagen alpha-3(IV) chain", "gene_name": "COL4A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16284-1", "protein_name": "Platelet endothelial cell adhesion molecule", "gene_name": "PECAM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35968-1", "protein_name": "Vascular endothelial growth factor receptor 2", "gene_name": "KDR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13683-1", "protein_name": "Integrin alpha-7", "gene_name": "ITGA7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18564-1", "protein_name": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKX5-1", "protein_name": "Integrin alpha-11", "gene_name": "ITGA11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08648-1", "protein_name": "Integrin alpha-5", "gene_name": "ITGA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13612-1", "protein_name": "Integrin alpha-4", "gene_name": "ITGA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05556-1", "protein_name": "Integrin beta-1", "gene_name": "ITGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02461-1", "protein_name": "Collagen alpha-1(III) chain", "gene_name": "COL3A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07092-1", "protein_name": "Collagen alpha-1(XVI) chain", "gene_name": "COL16A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29400-1", "protein_name": "Collagen alpha-5(IV) chain", "gene_name": "COL4A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14055-1", "protein_name": "Collagen alpha-2(IX) chain", "gene_name": "COL9A2", 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"gene_name": "VTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23229-1", "protein_name": "Integrin alpha-6", "gene_name": "ITGA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14773-1", "protein_name": "Intercellular adhesion molecule 4", "gene_name": "ICAM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13797-1", "protein_name": "Integrin alpha-9", "gene_name": "ITGA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32942-1", "protein_name": "Intercellular adhesion molecule 3", "gene_name": "ICAM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMF0-1", "protein_name": "Intercellular adhesion molecule 5", "gene_name": "ICAM5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20702-1", "protein_name": "Integrin alpha-X", "gene_name": "ITGAX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BX67-1", "protein_name": "Junctional adhesion molecule C", "gene_name": "JAM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17301-1", "protein_name": "Integrin alpha-2", "gene_name": "ITGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57087-1", "protein_name": "Junctional adhesion molecule B", "gene_name": "JAM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26012-1", "protein_name": "Integrin beta-8", "gene_name": "ITGB8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56199-1", "protein_name": "Integrin alpha-1", "gene_name": "ITGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19320-1", "protein_name": "Vascular cell adhesion protein 1", "gene_name": "VCAM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35555-1", "protein_name": "Fibrillin-1", "gene_name": "FBN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13598-1", "protein_name": "Intercellular adhesion molecule 2", "gene_name": "ICAM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24821-1", "protein_name": "Tenascin", "gene_name": "TNC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39060-3", "protein_name": "Collagen alpha-1(XVIII) chain", "gene_name": "COL18A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05107-1", "protein_name": "Integrin beta-2", "gene_name": "ITGB2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7542249", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 84 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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"protein_name": "Collagen alpha-1(I) chain", "gene_name": "COL1A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18084-1", "protein_name": "Integrin beta-5", "gene_name": "ITGB5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00468-1", "protein_name": "Agrin", "gene_name": "AGRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02751-15", "protein_name": "Fibronectin", "gene_name": "FN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21810-1", "protein_name": "Biglycan", "gene_name": "BGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92752-1", "protein_name": "Tenascin-R", "gene_name": "TNR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UQP3-1", "protein_name": "Tenascin-N", "gene_name": "TNN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53420-1", "protein_name": "Collagen alpha-4(IV) chain", "gene_name": "COL4A4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06828-1", "protein_name": "Fibromodulin", "gene_name": "FMOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75096-1", "protein_name": "Low-density lipoprotein receptor-related protein 4", "gene_name": "LRP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10915-1", "protein_name": "Hyaluronan and proteoglycan link protein 1", "gene_name": "HAPLN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16112-1", "protein_name": "Aggrecan core protein", "gene_name": "ACAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21815-1", "protein_name": "Integrin-binding sialoprotein", "gene_name": "IBSP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49747-1", "protein_name": "Cartilage oligomeric matrix protein", "gene_name": "COMP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXN1-1", "protein_name": "Asporin", "gene_name": "ASPN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12110-1", "protein_name": "Collagen alpha-2(VI) chain", "gene_name": "COL6A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14031-1", "protein_name": "Collagen alpha-6(IV) chain", "gene_name": "COL4A6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20908-1", "protein_name": "Collagen alpha-1(V) chain", "gene_name": "COL5A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02462-1", "protein_name": "Collagen alpha-1(IV) chain", "gene_name": "COL4A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08572-1", "protein_name": "Collagen alpha-2(IV) chain", "gene_name": "COL4A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20849-1", "protein_name": "Collagen alpha-1(IX) chain", "gene_name": "COL9A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25940-1", "protein_name": "Collagen alpha-3(V) chain", "gene_name": "COL5A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01955-1", "protein_name": "Collagen alpha-3(IV) chain", "gene_name": "COL4A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14118-1", "protein_name": "Dystroglycan 1", "gene_name": "DAG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07942-1", "protein_name": "Laminin subunit beta-1", "gene_name": "LAMB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24043-1", "protein_name": "Laminin subunit alpha-2", "gene_name": "LAMA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25391-1", "protein_name": "Laminin subunit alpha-1", "gene_name": "LAMA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11047-1", "protein_name": "Laminin subunit gamma-1", "gene_name": "LAMC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10600-1", "protein_name": "Transforming growth factor beta-3 proprotein", "gene_name": "TGFB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13683-1", "protein_name": "Integrin alpha-7", "gene_name": "ITGA7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16787-2", "protein_name": "Laminin subunit alpha-3", "gene_name": "LAMA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18564-1", "protein_name": "Integrin beta-6", "gene_name": "ITGB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16363-1", "protein_name": "Laminin subunit alpha-4", "gene_name": "LAMA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15230-1", "protein_name": "Laminin subunit alpha-5", "gene_name": "LAMA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95460-1", "protein_name": "Matrilin-4", "gene_name": "MATN4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08514-1", "protein_name": "Integrin alpha-IIb", "gene_name": "ITGA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06756-1", "protein_name": "Integrin alpha-V", "gene_name": "ITGAV", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53708-1", "protein_name": "Integrin alpha-8", "gene_name": "ITGA8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21941-1", "protein_name": "Matrilin-1", "gene_name": "MATN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05556-1", "protein_name": "Integrin beta-1", "gene_name": "ITGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02461-1", "protein_name": "Collagen alpha-1(III) chain", "gene_name": "COL3A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29400-1", "protein_name": "Collagen alpha-5(IV) chain", "gene_name": "COL4A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14055-1", "protein_name": "Collagen alpha-2(IX) chain", "gene_name": "COL9A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09486-1", "protein_name": "SPARC", "gene_name": "SPARC", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8TX70-1", "protein_name": "Collagen alpha-5(VI) chain", "gene_name": "COL6A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05997-1", "protein_name": "Collagen alpha-2(V) chain", "gene_name": "COL5A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NMZ7-1", "protein_name": "Collagen alpha-6(VI) chain", "gene_name": "COL6A6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12111-1", "protein_name": "Collagen alpha-3(VI) chain", "gene_name": "COL6A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08123-1", "protein_name": "Collagen alpha-2(I) chain", "gene_name": "COL1A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12109-1", "protein_name": "Collagen alpha-1(VI) chain", "gene_name": "COL6A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02458-2", "protein_name": "Collagen alpha-1(II) chain", "gene_name": "COL2A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14050-1", "protein_name": "Collagen alpha-3(IX) chain", "gene_name": "COL9A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05106-1", "protein_name": "Integrin beta-3", "gene_name": "ITGB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13611-1", "protein_name": "Versican core protein", "gene_name": "VCAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07585-1", "protein_name": "Decorin", "gene_name": "DCN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04004-1", "protein_name": "Vitronectin", "gene_name": "VTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZW4-1", "protein_name": "Dentin sialophosphoprotein", "gene_name": "DSPP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13797-1", "protein_name": "Integrin alpha-9", "gene_name": "ITGA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96GW7-1", "protein_name": "Brevican core protein", "gene_name": "BCAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15146-1", "protein_name": "Muscle, skeletal receptor tyrosine-protein kinase", "gene_name": "MUSK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13332-1", "protein_name": "Receptor-type tyrosine-protein phosphatase S", "gene_name": "PTPRS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20702-1", "protein_name": "Integrin alpha-X", "gene_name": "ITGAX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17301-1", "protein_name": "Integrin alpha-2", "gene_name": "ITGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15232-1", "protein_name": "Matrilin-3", "gene_name": "MATN3", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"uniprot_canonical_ac": "P61812-1", "protein_name": "Transforming growth factor beta-2 proprotein", "gene_name": "TGFB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05121-1", "protein_name": "Plasminogen activator inhibitor 1", "gene_name": "SERPINE1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7542669", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 76 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { 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"uniprot_canonical_ac": "P25774-1", "protein_name": "Cathepsin S", "gene_name": "CTSS", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15484-1", "protein_name": "Calpain-5", "gene_name": "CAPN5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60911-1", "protein_name": "Cathepsin L2", "gene_name": "CTSV", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07942-1", "protein_name": "Laminin subunit beta-1", "gene_name": "LAMB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49862-1", "protein_name": "Kallikrein-7", "gene_name": "KLK7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13753-1", "protein_name": "Laminin subunit gamma-2", "gene_name": "LAMC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11047-1", "protein_name": "Laminin subunit gamma-1", "gene_name": "LAMC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45452-1", "protein_name": "Collagenase 3", "gene_name": "MMP13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24347-1", "protein_name": "Stromelysin-3", "gene_name": "MMP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09238-1", "protein_name": "Stromelysin-2", "gene_name": "MMP10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51511-1", "protein_name": "Matrix metalloproteinase-15", "gene_name": "MMP15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96L46-1", "protein_name": "Calpain small subunit 2", "gene_name": "CAPNS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13751-1", "protein_name": "Laminin subunit beta-3", "gene_name": "LAMB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16787-2", "protein_name": "Laminin subunit alpha-3", "gene_name": "LAMA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15230-1", "protein_name": "Laminin subunit alpha-5", "gene_name": "LAMA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09237-1", "protein_name": "Matrilysin", "gene_name": "MMP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6L7-1", "protein_name": "Tolloid-like protein 2", "gene_name": "TLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42574-1", "protein_name": "Caspase-3", "gene_name": "CASP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00747-1", "protein_name": "Plasminogen", "gene_name": "PLG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14780-1", "protein_name": "Matrix metalloproteinase-9", "gene_name": "MMP9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07585-1", "protein_name": "Decorin", "gene_name": "DCN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6W3-1", "protein_name": "Calpain-7", "gene_name": "CAPN7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13497-1", "protein_name": "Bone morphogenetic protein 1", "gene_name": "BMP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NHC0-1", "protein_name": "Calpain-8", "gene_name": "CAPN8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14815-1", "protein_name": "Calpain-9", "gene_name": "CAPN9", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8MX76-1", "protein_name": "Calpain-14", "gene_name": "CAPN14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12830-1", "protein_name": "Cadherin-1", "gene_name": "CDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZSI9-1", "protein_name": "Calpain-12", "gene_name": "CAPN12", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17655-1", "protein_name": "Calpain-2 catalytic subunit", "gene_name": "CAPN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Q1-1", "protein_name": "Calpain-6", "gene_name": "CAPN6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08253-1", "protein_name": "72 kDa type IV collagenase", "gene_name": "MMP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IX30-1", "protein_name": "Signal peptide, CUB and EGF-like domain-containing protein 3", "gene_name": "SCUBE3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96GW7-1", "protein_name": "Brevican core protein", "gene_name": "BCAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE60-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 18", "gene_name": "ADAMTS18", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75173-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 4", "gene_name": "ADAMTS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2N4-3", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 9", "gene_name": "ADAMTS9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHI8-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 1", "gene_name": "ADAMTS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UP79-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 8", "gene_name": "ADAMTS8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20807-1", "protein_name": "Calpain-3", "gene_name": "CAPN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07384-1", "protein_name": "Calpain-1 catalytic subunit", "gene_name": "CAPN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC96-1", "protein_name": "Calpain-10", "gene_name": "CAPN10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43235-1", "protein_name": "Cathepsin K", "gene_name": "CTSK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMQ6-1", "protein_name": "Calpain-11", "gene_name": "CAPN11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35555-1", "protein_name": "Fibrillin-1", "gene_name": "FBN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35556-1", "protein_name": "Fibrillin-2", "gene_name": "FBN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q75N90-1", "protein_name": "Fibrillin-3", "gene_name": "FBN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20810-1", "protein_name": "Calpastatin", "gene_name": "CAST", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08254-1", "protein_name": "Stromelysin-1", "gene_name": "MMP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22894-1", "protein_name": "Neutrophil collagenase", "gene_name": "MMP8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99542-1", "protein_name": "Matrix metalloproteinase-19", "gene_name": "MMP19", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60882-1", "protein_name": "Matrix metalloproteinase-20", "gene_name": "MMP20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IU80-4", "protein_name": "Transmembrane protease serine 6", "gene_name": "TMPRSS6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49768-1", "protein_name": "Presenilin-1", "gene_name": "PSEN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14672-1", "protein_name": "Disintegrin and metalloproteinase domain-containing protein 10", "gene_name": "ADAM10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01023-1", "protein_name": "Alpha-2-macroglobulin", "gene_name": "A2M", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78325-1", "protein_name": "Disintegrin and metalloproteinase domain-containing protein 8", "gene_name": "ADAM8", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7547873", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 81 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Interactions between dystrophin glycoprotein complex proteins.", "journal": "Biochemistry", "date": "1995", "authors": "Madhavan R, Jarrett HW", "reference": { "type": "PubMed", "id": "7547961", "url": "https://pubmed.ncbi.nlm.nih.gov/7547961" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43556-1", "protein_name": "Epsilon-sarcoglycan", "gene_name": "SGCE", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00468-1", "protein_name": "Agrin", "gene_name": "AGRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16585-1", "protein_name": "Beta-sarcoglycan", "gene_name": "SGCB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14714-1", "protein_name": "Sarcospan", "gene_name": "SSPN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16586-1", "protein_name": "Alpha-sarcoglycan", "gene_name": "SGCA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LD1-1", "protein_name": "Zeta-sarcoglycan", "gene_name": "SGCZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92629-1", "protein_name": "Delta-sarcoglycan", "gene_name": "SGCD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14118-1", "protein_name": "Dystroglycan 1", "gene_name": "DAG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07942-1", "protein_name": "Laminin subunit beta-1", "gene_name": "LAMB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24043-1", "protein_name": "Laminin subunit alpha-2", "gene_name": "LAMA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25391-1", "protein_name": "Laminin subunit alpha-1", "gene_name": "LAMA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6N6-1", "protein_name": "Laminin subunit gamma-3", "gene_name": "LAMC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13753-1", "protein_name": "Laminin subunit gamma-2", "gene_name": "LAMC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11047-1", "protein_name": "Laminin subunit gamma-1", "gene_name": "LAMC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46939-1", "protein_name": "Utrophin", "gene_name": "UTRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY99-1", "protein_name": "Gamma-2-syntrophin", "gene_name": "SNTG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13751-1", "protein_name": "Laminin subunit beta-3", "gene_name": "LAMB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16787-2", "protein_name": "Laminin subunit alpha-3", "gene_name": "LAMA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16363-1", "protein_name": "Laminin subunit alpha-4", "gene_name": "LAMA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15230-1", "protein_name": "Laminin subunit alpha-5", "gene_name": "LAMA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4J8-1", "protein_name": "Dystrobrevin alpha", "gene_name": "DTNA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63267-1", "protein_name": "Actin, gamma-enteric smooth muscle", "gene_name": "ACTG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68032-1", "protein_name": "Actin, alpha cardiac muscle 1", "gene_name": "ACTC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13884-1", "protein_name": "Beta-1-syntrophin", "gene_name": "SNTB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13424-1", "protein_name": "Alpha-1-syntrophin", "gene_name": "SNTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13326-1", "protein_name": "Gamma-sarcoglycan", "gene_name": "SGCG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63261-1", "protein_name": "Actin, cytoplasmic 2", "gene_name": "ACTG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62736-1", "protein_name": "Actin, aortic smooth 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"Mouse" }, { "uniprot_canonical_ac": "O60941-1", "protein_name": "Dystrobrevin beta", "gene_name": "DTNB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68133-1", "protein_name": "Actin, alpha skeletal muscle", "gene_name": "ACTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P82348-1", "protein_name": "Gamma-sarcoglycan", "gene_name": "Sgcg", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7547961", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 41 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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"protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75056-1", "protein_name": "Syndecan-3", "gene_name": "SDC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00468-1", "protein_name": "Agrin", "gene_name": "AGRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51654-1", "protein_name": "Glypican-3", "gene_name": "GPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18827-1", "protein_name": "Syndecan-1", "gene_name": "SDC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31431-1", "protein_name": "Syndecan-4", "gene_name": "SDC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y625-1", "protein_name": "Glypican-6", "gene_name": "GPC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N158-1", "protein_name": "Glypican-2", "gene_name": "GPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34741-1", "protein_name": "Syndecan-2", "gene_name": "SDC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16394-1", "protein_name": "Exostosin-1", "gene_name": "EXT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78333-1", "protein_name": "Glypican-5", "gene_name": "GPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35052-1", "protein_name": "Glypican-1", "gene_name": "GPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75487-1", "protein_name": "Glypican-4", "gene_name": "GPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93063-1", "protein_name": "Exostosin-2", "gene_name": "EXT2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "snv": [ { "evidence": [ { "id": "rs886039355", "database": "dbSNP", "url": "https://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?type=rs&rs=rs886039355" }, { "id": "rs886039356", "database": "dbSNP", "url": "https://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?type=rs&rs=rs886039356" }, { "id": "7550340", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7550340" } ], "glycoeffect": [], "start_pos": 490, "end_pos": 490, "sequence_org": "L", "sequence_mut": "null", "comment": "Germline mutation passed 1 filters: glycogene of type=glycogene, glycosyltransferase.", "chr_id": "8", "chr_pos": "117819749", "ref_nt": "l", "alt_nt": "null", "minor_allelic_frequency": "", "site_lbl": "L490", "disease": [ { "disease_id": "DOID:3371", "recommended_name": { "id": "DOID:3371", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:3371", "name": "chondrosarcoma", "description": "A bone sarcoma that has_material_basis_in cells derived from transformed cells that produce cartilage." }, "synonyms": [ { "id": "DOID:3371", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:3371", "name": "Cartilaginous 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It usually affects middle-aged to elderly adults. The pelvic bones, ribs, shoulder girdle, and long bones are the most common sites of involvement. Most chondrosarcomas arise de novo, but some may develop in a preexisting benign cartilaginous lesion." }, { "id": "MONDO:0008977", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008977", "name": "chondrosarcoma", "description": "" }, { "id": "MONDO:0008977", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008977", "name": "chondrosarcoma (disease)", "description": "" }, { "id": "MONDO:0008977", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008977", "name": "chondrosarcoma, malignant", "description": "" }, { "id": "MONDO:0008977", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008977", "name": "chondrosarcoma, somatic mutation", "description": "" }, { "id": "MONDO:0008977", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0008977", "name": "chondrosarcoma of bone", "description": "" }, { "id": "MIM:215300", "resource": "MIM", "url": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P10451-1", "protein_name": "Osteopontin", "gene_name": "SPP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12110-1", "protein_name": "Collagen alpha-2(VI) chain", "gene_name": "COL6A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14031-1", "protein_name": "Collagen alpha-6(IV) chain", "gene_name": "COL4A6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20908-1", "protein_name": "Collagen alpha-1(V) chain", "gene_name": "COL5A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02462-1", "protein_name": "Collagen alpha-1(IV) chain", "gene_name": "COL4A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27658-1", "protein_name": "Collagen alpha-1(VIII) chain", "gene_name": "COL8A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08572-1", "protein_name": "Collagen alpha-2(IV) chain", "gene_name": "COL4A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25067-1", "protein_name": "Collagen alpha-2(VIII) 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"protein_name": "Laminin subunit alpha-1", "gene_name": "LAMA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11047-1", "protein_name": "Laminin subunit gamma-1", "gene_name": "LAMC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10600-1", "protein_name": "Transforming growth factor beta-3 proprotein", "gene_name": "TGFB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35968-1", "protein_name": "Vascular endothelial growth factor receptor 2", "gene_name": "KDR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13683-1", "protein_name": "Integrin alpha-7", "gene_name": "ITGA7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16787-2", "protein_name": "Laminin subunit alpha-3", "gene_name": "LAMA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18564-1", "protein_name": "Integrin beta-6", "gene_name": "ITGB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16363-1", "protein_name": "Laminin subunit alpha-4", "gene_name": "LAMA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15230-1", "protein_name": "Laminin subunit alpha-5", "gene_name": "LAMA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11215-1", "protein_name": "Integrin alpha-M", "gene_name": "ITGAM", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95460-1", "protein_name": "Matrilin-4", "gene_name": "MATN4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26006-2", "protein_name": "Integrin alpha-3", "gene_name": "ITGA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08514-1", "protein_name": "Integrin alpha-IIb", "gene_name": "ITGA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38570-1", "protein_name": "Integrin alpha-E", "gene_name": "ITGAE", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75578-1", "protein_name": "Integrin alpha-10", "gene_name": "ITGA10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06756-1", "protein_name": "Integrin alpha-V", "gene_name": "ITGAV", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53708-1", "protein_name": "Integrin alpha-8", "gene_name": "ITGA8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13349-1", "protein_name": "Integrin alpha-D", "gene_name": "ITGAD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKX5-1", "protein_name": "Integrin alpha-11", "gene_name": "ITGA11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21941-1", "protein_name": "Matrilin-1", "gene_name": "MATN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08648-1", "protein_name": "Integrin alpha-5", "gene_name": "ITGA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13612-1", "protein_name": "Integrin alpha-4", "gene_name": "ITGA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05556-1", "protein_name": "Integrin beta-1", "gene_name": "ITGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02461-1", "protein_name": "Collagen alpha-1(III) chain", "gene_name": "COL3A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07092-1", "protein_name": "Collagen alpha-1(XVI) chain", "gene_name": "COL16A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29400-1", "protein_name": "Collagen alpha-5(IV) chain", "gene_name": "COL4A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14055-1", "protein_name": "Collagen alpha-2(IX) chain", "gene_name": "COL9A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09486-1", "protein_name": "SPARC", "gene_name": "SPARC", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8TX70-1", "protein_name": "Collagen alpha-5(VI) chain", "gene_name": "COL6A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05997-1", "protein_name": "Collagen alpha-2(V) chain", "gene_name": "COL5A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NMZ7-1", "protein_name": "Collagen alpha-6(VI) chain", "gene_name": "COL6A6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12111-1", "protein_name": "Collagen alpha-3(VI) chain", "gene_name": "COL6A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5TAT6-1", "protein_name": "Collagen alpha-1(XIII) chain", "gene_name": "COL13A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08123-1", "protein_name": "Collagen alpha-2(I) chain", "gene_name": "COL1A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12109-1", "protein_name": "Collagen alpha-1(VI) chain", "gene_name": "COL6A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02458-2", "protein_name": "Collagen alpha-1(II) chain", "gene_name": "COL2A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14050-1", "protein_name": "Collagen alpha-3(IX) chain", "gene_name": "COL9A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02675-1", "protein_name": "Fibrinogen beta chain", "gene_name": "FGB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26010-1", "protein_name": "Integrin beta-7", "gene_name": "ITGB7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05106-1", "protein_name": "Integrin beta-3", "gene_name": "ITGB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13611-1", "protein_name": "Versican core protein", "gene_name": "VCAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q03692-1", "protein_name": "Collagen alpha-1(X) chain", "gene_name": "COL10A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07585-1", "protein_name": "Decorin", "gene_name": "DCN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12830-1", "protein_name": "Cadherin-1", "gene_name": "CDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04004-1", "protein_name": "Vitronectin", "gene_name": "VTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZW4-1", "protein_name": "Dentin sialophosphoprotein", "gene_name": "DSPP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23229-1", "protein_name": "Integrin alpha-6", "gene_name": "ITGA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14773-1", "protein_name": "Intercellular adhesion molecule 4", "gene_name": "ICAM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13797-1", "protein_name": "Integrin alpha-9", "gene_name": "ITGA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32942-1", "protein_name": "Intercellular adhesion molecule 3", "gene_name": "ICAM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMF0-1", "protein_name": "Intercellular adhesion molecule 5", "gene_name": "ICAM5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96GW7-1", "protein_name": "Brevican core protein", "gene_name": "BCAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15146-1", "protein_name": "Muscle, skeletal receptor tyrosine-protein kinase", "gene_name": "MUSK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13332-1", "protein_name": "Receptor-type tyrosine-protein phosphatase S", "gene_name": "PTPRS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20702-1", "protein_name": "Integrin alpha-X", "gene_name": "ITGAX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BX67-1", "protein_name": "Junctional adhesion molecule C", "gene_name": "JAM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17301-1", "protein_name": "Integrin alpha-2", "gene_name": "ITGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57087-1", "protein_name": "Junctional adhesion molecule B", "gene_name": "JAM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15232-1", "protein_name": "Matrilin-3", "gene_name": "MATN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26012-1", "protein_name": "Integrin beta-8", "gene_name": "ITGB8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56199-1", "protein_name": "Integrin alpha-1", "gene_name": "ITGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22105-3", "protein_name": "Tenascin-X", "gene_name": "TNXB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13591-2", "protein_name": "Neural cell adhesion molecule 1", "gene_name": "NCAM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19320-1", "protein_name": "Vascular cell adhesion protein 1", "gene_name": "VCAM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13316-1", "protein_name": "Dentin matrix acidic phosphoprotein 1", "gene_name": "DMP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35555-1", "protein_name": "Fibrillin-1", "gene_name": "FBN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13598-1", "protein_name": "Intercellular adhesion molecule 2", "gene_name": "ICAM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55268-1", "protein_name": "Laminin subunit beta-2", "gene_name": "LAMB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24821-1", "protein_name": "Tenascin", "gene_name": "TNC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14594-1", "protein_name": "Neurocan core protein", "gene_name": "NCAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05067-1", "protein_name": "Amyloid-beta precursor protein", "gene_name": "APP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01137-1", "protein_name": "Transforming growth factor beta-1 proprotein", "gene_name": "TGFB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61812-1", "protein_name": "Transforming growth factor beta-2 proprotein", "gene_name": "TGFB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39060-3", "protein_name": "Collagen alpha-1(XVIII) chain", "gene_name": "COL18A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05121-1", "protein_name": "Plasminogen activator inhibitor 1", "gene_name": "SERPINE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05107-1", "protein_name": "Integrin beta-2", "gene_name": "ITGB2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7559467", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 120 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification and characterization of the dystrophin anchoring site on beta-dystroglycan.", "journal": "The Journal of biological chemistry", "date": "1995-11-10", "authors": "Jung D, Yang B, Meyer J, Chamberlain J S, Campbell K P", "reference": { "type": "PubMed", "id": "7592992", "url": "https://pubmed.ncbi.nlm.nih.gov/7592992" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43556-1", "protein_name": "Epsilon-sarcoglycan", "gene_name": "SGCE", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00468-1", "protein_name": "Agrin", "gene_name": "AGRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16585-1", "protein_name": "Beta-sarcoglycan", "gene_name": "SGCB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14714-1", "protein_name": "Sarcospan", "gene_name": "SSPN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16586-1", "protein_name": "Alpha-sarcoglycan", "gene_name": "SGCA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LD1-1", "protein_name": "Zeta-sarcoglycan", "gene_name": "SGCZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92629-1", "protein_name": "Delta-sarcoglycan", "gene_name": "SGCD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14118-1", "protein_name": "Dystroglycan 1", "gene_name": "DAG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07942-1", "protein_name": "Laminin subunit beta-1", "gene_name": "LAMB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24043-1", "protein_name": "Laminin subunit alpha-2", "gene_name": "LAMA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25391-1", "protein_name": "Laminin subunit alpha-1", "gene_name": "LAMA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6N6-1", "protein_name": "Laminin subunit gamma-3", "gene_name": "LAMC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13753-1", "protein_name": "Laminin subunit gamma-2", "gene_name": "LAMC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11047-1", "protein_name": "Laminin subunit gamma-1", "gene_name": "LAMC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46939-1", "protein_name": "Utrophin", "gene_name": "UTRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY99-1", "protein_name": "Gamma-2-syntrophin", "gene_name": "SNTG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13751-1", "protein_name": "Laminin subunit beta-3", "gene_name": "LAMB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16787-2", "protein_name": "Laminin subunit alpha-3", "gene_name": "LAMA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16363-1", "protein_name": "Laminin subunit alpha-4", "gene_name": "LAMA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15230-1", "protein_name": "Laminin subunit alpha-5", "gene_name": "LAMA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4J8-1", "protein_name": "Dystrobrevin alpha", "gene_name": "DTNA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63267-1", "protein_name": "Actin, gamma-enteric smooth muscle", "gene_name": "ACTG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68032-1", "protein_name": "Actin, alpha cardiac muscle 1", "gene_name": "ACTC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13884-1", "protein_name": "Beta-1-syntrophin", "gene_name": "SNTB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13424-1", "protein_name": "Alpha-1-syntrophin", "gene_name": "SNTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13326-1", "protein_name": "Gamma-sarcoglycan", "gene_name": "SGCG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63261-1", "protein_name": "Actin, cytoplasmic 2", "gene_name": "ACTG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62736-1", "protein_name": "Actin, aortic smooth muscle", "gene_name": "ACTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11532-1", "protein_name": "Dystrophin", "gene_name": "DMD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13425-1", "protein_name": "Beta-2-syntrophin", "gene_name": "SNTB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13474-1", "protein_name": "Dystrophin-related protein 2", "gene_name": "DRP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55268-1", "protein_name": "Laminin subunit beta-2", "gene_name": "LAMB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60941-1", "protein_name": "Dystrobrevin beta", "gene_name": "DTNB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68133-1", "protein_name": "Actin, alpha skeletal muscle", "gene_name": "ACTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7592992", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 36 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", 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"https://pubmed.ncbi.nlm.nih.gov/7601448" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75056-1", "protein_name": "Syndecan-3", "gene_name": "SDC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00468-1", "protein_name": "Agrin", "gene_name": "AGRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51654-1", "protein_name": "Glypican-3", "gene_name": "GPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60243-1", "protein_name": "Heparan-sulfate 6-O-sulfotransferase 1", "gene_name": "HS6ST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZT8-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 5", "gene_name": "HS3ST5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y661-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 4", "gene_name": "HS3ST4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y278-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 2", "gene_name": "HS3ST2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76EJ3-1", "protein_name": "Nucleotide sugar transporter SLC35D2", "gene_name": "SLC35D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18827-1", "protein_name": "Syndecan-1", "gene_name": "SDC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31431-1", "protein_name": "Syndecan-4", "gene_name": "SDC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y625-1", "protein_name": "Glypican-6", "gene_name": "GPC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52848-1", "protein_name": "Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1", "gene_name": "NDST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95803-1", "protein_name": "Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 3", "gene_name": "NDST3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N158-1", "protein_name": "Glypican-2", "gene_name": "GPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94923-1", "protein_name": "D-glucuronyl C5-epimerase", "gene_name": "GLCE", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43909-1", "protein_name": "Exostosin-like 3", "gene_name": "EXTL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34741-1", "protein_name": "Syndecan-2", "gene_name": "SDC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16394-1", "protein_name": "Exostosin-1", "gene_name": "EXT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78333-1", "protein_name": "Glypican-5", "gene_name": "GPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35052-1", "protein_name": "Glypican-1", "gene_name": "GPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MM7-1", "protein_name": "Heparan-sulfate 6-O-sulfotransferase 2", "gene_name": "HS6ST2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBQ6-1", "protein_name": "Exostosin-like 2", "gene_name": "EXTL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14792-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 1", "gene_name": "HS3ST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y662-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 3B1", "gene_name": "HS3ST3B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52849-1", "protein_name": "Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2", "gene_name": "NDST2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H3R1-1", "protein_name": "N-heparan sulfate sulfotransferase 4", "gene_name": "NDST4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75487-1", "protein_name": "Glypican-4", "gene_name": "GPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93063-1", "protein_name": "Exostosin-2", "gene_name": "EXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LGA3-1", "protein_name": "Heparan sulfate 2-O-sulfotransferase 1", "gene_name": "HS2ST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZP7-1", "protein_name": "Heparan-sulfate 6-O-sulfotransferase 3", "gene_name": "HS6ST3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y663-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 3A1", "gene_name": "HS3ST3A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QI5-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 6", "gene_name": "HS3ST6", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7601448", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 33 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Role of heparan sulfate proteoglycans in the binding and uptake of apolipoprotein E-enriched remnant lipoproteins by cultured cells.", "journal": "The Journal of biological chemistry", "date": "1993", "authors": "Ji ZS, Brecht WJ, Miranda RD, Hussain MM, Innerarity TL, Mahley RW", "reference": { "type": "PubMed", "id": "7683668", "url": "https://pubmed.ncbi.nlm.nih.gov/7683668" }, "referenced_glycans": 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"uniprot_canonical_ac": "Q8TC12-1", "protein_name": "Retinol dehydrogenase 11", "gene_name": "RDH11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50120-1", "protein_name": "Retinol-binding protein 2", "gene_name": "RBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6NUM9-1", "protein_name": "All-trans-retinol 13,14-reductase", "gene_name": "RETSAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18827-1", "protein_name": "Syndecan-1", "gene_name": "SDC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02656-1", "protein_name": "Apolipoprotein C-III", "gene_name": "APOC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02649-1", "protein_name": "Apolipoprotein E", "gene_name": "APOE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAY6-1", "protein_name": "Beta,beta-carotene 15,15'-dioxygenase", "gene_name": "BCO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02766-1", "protein_name": "Transthyretin", "gene_name": "TTR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31431-1", "protein_name": "Syndecan-4", "gene_name": "SDC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16233-1", "protein_name": "Pancreatic triacylglycerol lipase", "gene_name": "PNLIP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y625-1", "protein_name": "Glypican-6", "gene_name": "GPC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N158-1", "protein_name": "Glypican-2", "gene_name": "GPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y561-1", "protein_name": "Low-density lipoprotein receptor-related protein 12", "gene_name": "LRP12", "tax_name": "Human" }, { "uniprot_canonical_ac": "P98164-1", "protein_name": "Low-density lipoprotein receptor-related protein 2", "gene_name": "LRP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02652-1", "protein_name": "Apolipoprotein A-II", "gene_name": "APOA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14114-1", "protein_name": "Low-density lipoprotein receptor-related 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Interaction of biglycan with type I collagen.", "journal": "The Journal of biological chemistry", "date": "1995", "authors": "Schonherr E, Witsch-Prehm P, Harrach B, Robenek H, Rauterberg J, Kresse H", "reference": { "type": "PubMed", "id": "7852349", "url": "https://pubmed.ncbi.nlm.nih.gov/7852349" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", 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"gene_name": "APP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01137-1", "protein_name": "Transforming growth factor beta-1 proprotein", "gene_name": "TGFB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61812-1", "protein_name": "Transforming growth factor beta-2 proprotein", "gene_name": "TGFB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05121-1", "protein_name": "Plasminogen activator inhibitor 1", "gene_name": "SERPINE1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7852349", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 76 } ], 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Dystroglycan is a binding protein of laminin and merosin in peripheral nerve.", "journal": "FEBS letters", "date": "1994", "authors": "Yamada H, Shimizu T, Tanaka T, Campbell KP, Matsumura K", "reference": { "type": "PubMed", "id": "7925941", "url": "https://pubmed.ncbi.nlm.nih.gov/7925941" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate 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"gene_name": "ADGRV1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16585-1", "protein_name": "Beta-sarcoglycan", "gene_name": "SGCB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SK9-1", "protein_name": "Stearoyl-CoA desaturase 5", "gene_name": "SCD5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14714-1", "protein_name": "Sarcospan", "gene_name": "SSPN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16586-1", "protein_name": "Alpha-sarcoglycan", "gene_name": "SGCA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LD1-1", "protein_name": "Zeta-sarcoglycan", "gene_name": "SGCZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92629-1", "protein_name": "Delta-sarcoglycan", "gene_name": "SGCD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12772-1", "protein_name": "Sterol regulatory element-binding protein 2", "gene_name": "SREBF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14118-1", "protein_name": "Dystroglycan 1", "gene_name": "DAG1", 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"Human" }, { "uniprot_canonical_ac": "Q01453-1", "protein_name": "Peripheral myelin protein 22", "gene_name": "PMP22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13751-1", "protein_name": "Laminin subunit beta-3", "gene_name": "LAMB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16787-2", "protein_name": "Laminin subunit alpha-3", "gene_name": "LAMA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16363-1", "protein_name": "Laminin subunit alpha-4", "gene_name": "LAMA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15230-1", "protein_name": "Laminin subunit alpha-5", "gene_name": "LAMA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20916-1", "protein_name": "Myelin-associated glycoprotein", "gene_name": "MAG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4J8-1", "protein_name": "Dystrobrevin alpha", "gene_name": "DTNA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63267-1", "protein_name": "Actin, gamma-enteric smooth muscle", "gene_name": 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"gene_name": "HMGCR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28347-1", "protein_name": "Transcriptional enhancer factor TEF-1", "gene_name": "TEAD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13474-1", "protein_name": "Dystrophin-related protein 2", "gene_name": "DRP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20265-1", "protein_name": "POU domain, class 3, transcription factor 2", "gene_name": "POU3F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55268-1", "protein_name": "Laminin subunit beta-2", "gene_name": "LAMB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11161-1", "protein_name": "E3 SUMO-protein ligase EGR2", "gene_name": "EGR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46937-1", "protein_name": "Transcriptional coactivator YAP1", "gene_name": "YAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZV5-1", "protein_name": "WW domain-containing transcription regulator protein 1", "gene_name": "WWTR1", "tax_name": 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Retinyl ester hydrolytic activity associated with human intestinal brush border membranes.", "journal": "The American journal of clinical nutrition", "date": "1994", "authors": "Rigtrup KM, McEwen LR, Said HM, Ong DE", "reference": { "type": "PubMed", "id": "8017323", "url": "https://pubmed.ncbi.nlm.nih.gov/8017323" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": 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"sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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component.", "journal": "Nature", "date": "1994", "authors": "Emsley J, White HE, O'Hara BP, Oliva G, Srinivasan N, Tickle IJ, Blundell TL, Pepys MB, Wood SP", "reference": { "type": "PubMed", "id": "8114934", "url": "https://pubmed.ncbi.nlm.nih.gov/8114934" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61626-1", "protein_name": "Lysozyme C", "gene_name": "LYZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DJI8-1", "protein_name": "Serum amyloid A-1 protein", "gene_name": "SAA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04279-1", "protein_name": "Semenogelin-1", "gene_name": "SEMG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95858-1", "protein_name": "Tetraspanin-15", "gene_name": "TSPAN15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02788-1", 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"protein_name": "Odontogenic ameloblast-associated protein", "gene_name": "ODAM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10997-1", "protein_name": "Islet amyloid polypeptide", "gene_name": "IAPP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02743-1", "protein_name": "Serum amyloid P-component", "gene_name": "APCS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01236-1", "protein_name": "Prolactin", "gene_name": "PRL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6H5-1", "protein_name": "Synphilin-1", "gene_name": "SNCAIP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92673-1", "protein_name": "Sortilin-related receptor", "gene_name": "SORL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15582-1", "protein_name": "Transforming growth factor-beta-induced protein ig-h3", "gene_name": "TGFBI", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02649-1", "protein_name": "Apolipoprotein E", "gene_name": "APOE", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01258-1", "protein_name": "Calcitonin", "gene_name": "CALCA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJY5-1", "protein_name": "ADP-ribosylation factor-binding protein GGA1", "gene_name": "GGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05937-1", "protein_name": "Calbindin", "gene_name": "CALB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02766-1", "protein_name": "Transthyretin", "gene_name": "TTR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y287-1", "protein_name": "Integral membrane protein 2B", "gene_name": "ITM2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43255-1", "protein_name": "E3 ubiquitin-protein ligase SIAH2", "gene_name": "SIAH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62079-1", "protein_name": "Tetraspanin-5", "gene_name": "TSPAN5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86UF1-1", "protein_name": "Tetraspanin-33", "gene_name": "TSPAN33", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61769-1", "protein_name": "Beta-2-microglobulin", "gene_name": "B2M", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01160-1", "protein_name": "Natriuretic peptides A", "gene_name": "NPPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06727-1", "protein_name": "Apolipoprotein A-IV", "gene_name": "APOA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW43-1", "protein_name": "Gamma-secretase subunit APH-1B", "gene_name": "APH1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06396-1", "protein_name": "Gelsolin", "gene_name": "GSN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60260-1", "protein_name": "E3 ubiquitin-protein ligase parkin", "gene_name": "PRKN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01034-1", "protein_name": "Cystatin-C", "gene_name": "CST3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZ52-1", "protein_name": "ADP-ribosylation factor-binding protein GGA3", "gene_name": "GGA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJY4-1", "protein_name": "ADP-ribosylation factor-binding protein GGA2", "gene_name": "GGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93008-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 9X", "gene_name": "USP9X", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NG11-1", "protein_name": "Tetraspanin-14", "gene_name": "TSPAN14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHE5-1", "protein_name": "N-acetyltransferase 8", "gene_name": "NAT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHF3-1", "protein_name": "N-acetyltransferase 8B", "gene_name": "NAT8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56817-1", "protein_name": "Beta-secretase 1", "gene_name": "BACE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01308-1", "protein_name": "Insulin", "gene_name": "INS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08431-1", "protein_name": "Lactadherin", "gene_name": "MFGE8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05067-1", "protein_name": "Amyloid-beta precursor protein", "gene_name": "APP", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14672-1", "protein_name": "Disintegrin and metalloproteinase domain-containing protein 10", "gene_name": "ADAM10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02647-1", "protein_name": "Apolipoprotein A-I", "gene_name": "APOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUQ4-1", "protein_name": "E3 ubiquitin-protein ligase SIAH1", "gene_name": "SIAH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P37840-1", "protein_name": "Alpha-synuclein", "gene_name": "SNCA", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8114934", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 80 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"uniprot_canonical_ac": "Q08722-1", "protein_name": "Leukocyte surface antigen CD47", "gene_name": "CD47", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53420-1", "protein_name": "Collagen alpha-4(IV) chain", "gene_name": "COL4A4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02679-1", "protein_name": "Fibrinogen gamma chain", "gene_name": "FGG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86Y22-1", "protein_name": "Collagen alpha-1(XXIII) chain", "gene_name": "COL23A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20701-1", "protein_name": "Integrin alpha-L", "gene_name": "ITGAL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05362-1", "protein_name": "Intercellular adhesion molecule 1", "gene_name": "ICAM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y624-1", "protein_name": "Junctional adhesion molecule A", "gene_name": "F11R", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35613-1", "protein_name": "Basigin", "gene_name": "BSG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21815-1", "protein_name": "Integrin-binding sialoprotein", "gene_name": "IBSP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49747-1", "protein_name": "Cartilage oligomeric matrix protein", "gene_name": "COMP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04275-1", "protein_name": "von Willebrand factor", "gene_name": "VWF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07996-1", "protein_name": "Thrombospondin-1", "gene_name": "THBS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16070-1", "protein_name": "CD44 antigen", "gene_name": "CD44", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10451-1", "protein_name": "Osteopontin", "gene_name": "SPP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12110-1", "protein_name": "Collagen alpha-2(VI) chain", "gene_name": "COL6A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14031-1", "protein_name": "Collagen alpha-6(IV) chain", "gene_name": "COL4A6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20908-1", "protein_name": "Collagen alpha-1(V) chain", "gene_name": "COL5A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02462-1", "protein_name": "Collagen alpha-1(IV) chain", "gene_name": "COL4A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27658-1", "protein_name": "Collagen alpha-1(VIII) chain", "gene_name": "COL8A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08572-1", "protein_name": "Collagen alpha-2(IV) chain", "gene_name": "COL4A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25067-1", "protein_name": "Collagen alpha-2(VIII) chain", "gene_name": "COL8A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20849-1", "protein_name": "Collagen alpha-1(IX) chain", "gene_name": "COL9A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25940-1", "protein_name": "Collagen alpha-3(V) chain", "gene_name": "COL5A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01955-1", "protein_name": "Collagen alpha-3(IV) 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P02461-1", "protein_name": "Collagen alpha-1(III) chain", "gene_name": "COL3A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07092-1", "protein_name": "Collagen alpha-1(XVI) chain", "gene_name": "COL16A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29400-1", "protein_name": "Collagen alpha-5(IV) chain", "gene_name": "COL4A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14055-1", "protein_name": "Collagen alpha-2(IX) chain", "gene_name": "COL9A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8TX70-1", "protein_name": "Collagen alpha-5(VI) chain", "gene_name": "COL6A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05997-1", "protein_name": "Collagen alpha-2(V) chain", "gene_name": "COL5A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NMZ7-1", "protein_name": "Collagen alpha-6(VI) chain", "gene_name": "COL6A6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12111-1", "protein_name": "Collagen alpha-3(VI) chain", "gene_name": "COL6A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5TAT6-1", "protein_name": "Collagen alpha-1(XIII) chain", "gene_name": "COL13A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08123-1", "protein_name": "Collagen alpha-2(I) chain", "gene_name": "COL1A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12109-1", "protein_name": "Collagen alpha-1(VI) chain", "gene_name": "COL6A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02458-2", "protein_name": "Collagen alpha-1(II) chain", "gene_name": "COL2A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14050-1", "protein_name": "Collagen alpha-3(IX) chain", "gene_name": "COL9A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02675-1", "protein_name": "Fibrinogen beta chain", "gene_name": "FGB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26010-1", "protein_name": "Integrin beta-7", "gene_name": "ITGB7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05106-1", "protein_name": "Integrin beta-3", "gene_name": "ITGB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q03692-1", "protein_name": "Collagen alpha-1(X) chain", "gene_name": "COL10A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12830-1", "protein_name": "Cadherin-1", "gene_name": "CDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04004-1", "protein_name": "Vitronectin", "gene_name": "VTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23229-1", "protein_name": "Integrin alpha-6", "gene_name": "ITGA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14773-1", "protein_name": "Intercellular adhesion molecule 4", "gene_name": "ICAM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13797-1", "protein_name": "Integrin alpha-9", "gene_name": "ITGA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32942-1", "protein_name": "Intercellular adhesion molecule 3", "gene_name": "ICAM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMF0-1", "protein_name": "Intercellular adhesion molecule 5", "gene_name": "ICAM5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20702-1", "protein_name": "Integrin alpha-X", "gene_name": "ITGAX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BX67-1", "protein_name": "Junctional adhesion molecule C", "gene_name": "JAM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17301-1", "protein_name": "Integrin alpha-2", "gene_name": "ITGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57087-1", "protein_name": "Junctional adhesion molecule B", "gene_name": "JAM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26012-1", "protein_name": "Integrin beta-8", "gene_name": "ITGB8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56199-1", "protein_name": "Integrin alpha-1", "gene_name": "ITGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19320-1", "protein_name": "Vascular cell adhesion protein 1", "gene_name": "VCAM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35555-1", "protein_name": "Fibrillin-1", "gene_name": "FBN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13598-1", "protein_name": "Intercellular adhesion molecule 2", "gene_name": "ICAM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24821-1", "protein_name": "Tenascin", "gene_name": "TNC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39060-3", "protein_name": "Collagen alpha-1(XVIII) chain", "gene_name": "COL18A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05107-1", "protein_name": "Integrin beta-2", "gene_name": "ITGB2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8118028", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 84 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Factor IXa protects factor VIIIa from activated protein C. Factor IXa inhibits activated protein C-catalyzed cleavage of factor VIIIa at Arg562.", "journal": "The Journal of biological chemistry", "date": "1994", "authors": "Regan LM, Lamphear BJ, Huggins CF, Walker FJ, Fay PJ", "reference": { "type": "PubMed", "id": "8144529", "url": "https://pubmed.ncbi.nlm.nih.gov/8144529" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75056-1", "protein_name": "Syndecan-3", "gene_name": "SDC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07204-1", "protein_name": "Thrombomodulin", "gene_name": "THBD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00734-1", "protein_name": "Prothrombin", "gene_name": "F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4KMQ2-1", "protein_name": "Anoctamin-6", "gene_name": "ANO6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00468-1", "protein_name": "Agrin", "gene_name": "AGRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q75V66-1", "protein_name": "Anoctamin-5", "gene_name": "ANO5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01008-1", "protein_name": "Antithrombin-III", "gene_name": "SERPINC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07093-1", "protein_name": "Glia-derived nexin", "gene_name": "SERPINE2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNN8-1", "protein_name": "Endothelial protein C receptor", "gene_name": "PROCR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51654-1", "protein_name": "Glypican-3", "gene_name": "GPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07359-1", "protein_name": "Platelet glycoprotein Ib alpha chain", "gene_name": "GP1BA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13224-1", "protein_name": "Platelet glycoprotein Ib beta chain", "gene_name": "GP1BB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24158-1", "protein_name": "Myeloblastin", "gene_name": "PRTN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25116-1", "protein_name": "Proteinase-activated receptor 1", "gene_name": "F2R", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18827-1", "protein_name": "Syndecan-1", "gene_name": "SDC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04275-1", "protein_name": "von Willebrand factor", "gene_name": "VWF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17405-1", "protein_name": "Sphingomyelin phosphodiesterase", "gene_name": "SMPD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76LX8-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 13", "gene_name": "ADAMTS13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6Q3-1", "protein_name": "CD177 antigen", "gene_name": "CD177", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31431-1", "protein_name": "Syndecan-4", "gene_name": "SDC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y625-1", "protein_name": "Glypican-6", "gene_name": "GPC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05154-1", "protein_name": "Plasma serine protease inhibitor", "gene_name": "SERPINA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05155-1", "protein_name": "Plasma protease C1 inhibitor", "gene_name": "SERPING1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N158-1", "protein_name": "Glypican-2", "gene_name": "GPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P03951-1", "protein_name": "Coagulation factor XI", "gene_name": "F11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00740-1", "protein_name": "Coagulation factor IX", "gene_name": "F9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02776-1", "protein_name": "Platelet factor 4", "gene_name": "PF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04070-1", "protein_name": "Vitamin K-dependent protein C", "gene_name": "PROC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34741-1", "protein_name": "Syndecan-2", "gene_name": "SDC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78333-1", "protein_name": "Glypican-5", "gene_name": "GPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35052-1", "protein_name": "Glypican-1", "gene_name": "GPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UK55-1", "protein_name": "Protein Z-dependent protease inhibitor", "gene_name": "SERPINA10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10720-1", "protein_name": "Platelet factor 4 variant", "gene_name": "PF4V1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07225-1", "protein_name": "Vitamin K-dependent protein S", "gene_name": "PROS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05546-1", "protein_name": "Heparin cofactor 2", "gene_name": "SERPIND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22891-1", "protein_name": "Vitamin K-dependent protein Z", "gene_name": "PROZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00742-1", "protein_name": "Coagulation factor X", "gene_name": "F10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75487-1", "protein_name": "Glypican-4", "gene_name": "GPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14770-1", "protein_name": "Platelet glycoprotein IX", "gene_name": "GP9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40197-1", "protein_name": "Platelet glycoprotein V", "gene_name": "GP5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08709-1", "protein_name": "Coagulation factor VII", "gene_name": "F7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13726-1", "protein_name": "Tissue factor", "gene_name": "F3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05067-1", "protein_name": "Amyloid-beta precursor protein", "gene_name": "APP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05121-1", "protein_name": "Plasminogen activator inhibitor 1", "gene_name": "SERPINE1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8144529", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 47 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ 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"protein_name": "Plasminogen", "gene_name": "PLG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14780-1", "protein_name": "Matrix metalloproteinase-9", "gene_name": "MMP9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07585-1", "protein_name": "Decorin", "gene_name": "DCN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6W3-1", "protein_name": "Calpain-7", "gene_name": "CAPN7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13497-1", "protein_name": "Bone morphogenetic protein 1", "gene_name": "BMP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NHC0-1", "protein_name": "Calpain-8", "gene_name": "CAPN8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14815-1", "protein_name": "Calpain-9", "gene_name": "CAPN9", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8MX76-1", "protein_name": "Calpain-14", "gene_name": "CAPN14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12830-1", "protein_name": "Cadherin-1", "gene_name": "CDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZSI9-1", "protein_name": "Calpain-12", "gene_name": "CAPN12", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17655-1", "protein_name": "Calpain-2 catalytic subunit", "gene_name": "CAPN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Q1-1", "protein_name": "Calpain-6", "gene_name": "CAPN6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08253-1", "protein_name": "72 kDa type IV collagenase", "gene_name": "MMP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IX30-1", "protein_name": "Signal peptide, CUB and EGF-like domain-containing protein 3", "gene_name": "SCUBE3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96GW7-1", "protein_name": "Brevican core protein", "gene_name": "BCAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE60-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 18", "gene_name": "ADAMTS18", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75173-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 4", "gene_name": "ADAMTS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2N4-3", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 9", "gene_name": "ADAMTS9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHI8-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 1", "gene_name": "ADAMTS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UP79-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 8", "gene_name": "ADAMTS8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20807-1", "protein_name": "Calpain-3", "gene_name": "CAPN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07384-1", "protein_name": "Calpain-1 catalytic subunit", "gene_name": "CAPN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC96-1", "protein_name": "Calpain-10", "gene_name": "CAPN10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43235-1", "protein_name": "Cathepsin K", "gene_name": "CTSK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMQ6-1", "protein_name": "Calpain-11", "gene_name": "CAPN11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35555-1", "protein_name": "Fibrillin-1", "gene_name": "FBN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35556-1", "protein_name": "Fibrillin-2", "gene_name": "FBN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q75N90-1", "protein_name": "Fibrillin-3", "gene_name": "FBN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20810-1", "protein_name": "Calpastatin", "gene_name": "CAST", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08254-1", "protein_name": "Stromelysin-1", "gene_name": "MMP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22894-1", "protein_name": "Neutrophil collagenase", "gene_name": "MMP8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99542-1", "protein_name": "Matrix metalloproteinase-19", "gene_name": "MMP19", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60882-1", "protein_name": "Matrix metalloproteinase-20", "gene_name": "MMP20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IU80-4", "protein_name": "Transmembrane protease serine 6", "gene_name": "TMPRSS6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49768-1", "protein_name": "Presenilin-1", "gene_name": "PSEN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14672-1", "protein_name": "Disintegrin and metalloproteinase domain-containing protein 10", "gene_name": "ADAM10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01023-1", "protein_name": "Alpha-2-macroglobulin", "gene_name": "A2M", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78325-1", "protein_name": "Disintegrin and metalloproteinase domain-containing protein 8", "gene_name": "ADAM8", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": 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"sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structural characterization of the complete human perlecan gene and its promoter.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "1993", "authors": "Cohen I R, Gr\u00e4ssel S, Murdoch A D, Iozzo R V", "reference": { "type": "PubMed", "id": "8234307", "url": "https://pubmed.ncbi.nlm.nih.gov/8234307" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8234307", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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{ "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Human dystroglycan: skeletal muscle cDNA, genomic structure, origin of tissue specific isoforms and chromosomal localization.", "journal": "Human molecular genetics", "date": "1993-10", "authors": "Ibraghimov-Beskrovnaya O, Milatovich A, Ozcelik T, Yang B, Koepnick K, Francke U, Campbell K P", "reference": { "type": "PubMed", "id": "8268918", "url": "https://pubmed.ncbi.nlm.nih.gov/8268918" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P07942-1", "protein_name": "Laminin subunit beta-1", "gene_name": "LAMB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24043-1", "protein_name": "Laminin subunit alpha-2", "gene_name": "LAMA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25391-1", "protein_name": "Laminin subunit alpha-1", "gene_name": "LAMA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6N6-1", "protein_name": "Laminin subunit gamma-3", "gene_name": "LAMC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13753-1", "protein_name": "Laminin subunit gamma-2", "gene_name": "LAMC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11047-1", "protein_name": "Laminin subunit gamma-1", "gene_name": "LAMC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46939-1", "protein_name": "Utrophin", "gene_name": "UTRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY99-1", "protein_name": "Gamma-2-syntrophin", "gene_name": "SNTG2", "tax_name": 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}, { "uniprot_canonical_ac": "O60941-1", "protein_name": "Dystrobrevin beta", "gene_name": "DTNB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68133-1", "protein_name": "Actin, alpha skeletal muscle", "gene_name": "ACTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8268918", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 36 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"uniprot_canonical_ac": "P27658-1", "protein_name": "Collagen alpha-1(VIII) chain", "gene_name": "COL8A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08572-1", "protein_name": "Collagen alpha-2(IV) chain", "gene_name": "COL4A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25067-1", "protein_name": "Collagen alpha-2(VIII) chain", "gene_name": "COL8A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20849-1", "protein_name": "Collagen alpha-1(IX) chain", "gene_name": "COL9A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25940-1", "protein_name": "Collagen alpha-3(V) chain", "gene_name": "COL5A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01955-1", "protein_name": "Collagen alpha-3(IV) chain", "gene_name": "COL4A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16284-1", "protein_name": "Platelet endothelial cell adhesion molecule", "gene_name": "PECAM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35968-1", "protein_name": "Vascular 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P29400-1", "protein_name": "Collagen alpha-5(IV) chain", "gene_name": "COL4A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14055-1", "protein_name": "Collagen alpha-2(IX) chain", "gene_name": "COL9A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8TX70-1", "protein_name": "Collagen alpha-5(VI) chain", "gene_name": "COL6A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05997-1", "protein_name": "Collagen alpha-2(V) chain", "gene_name": "COL5A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NMZ7-1", "protein_name": "Collagen alpha-6(VI) chain", "gene_name": "COL6A6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12111-1", "protein_name": "Collagen alpha-3(VI) chain", "gene_name": "COL6A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5TAT6-1", "protein_name": "Collagen alpha-1(XIII) chain", "gene_name": "COL13A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08123-1", "protein_name": "Collagen 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"Intercellular adhesion molecule 2", "gene_name": "ICAM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24821-1", "protein_name": "Tenascin", "gene_name": "TNC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39060-3", "protein_name": "Collagen alpha-1(XVIII) chain", "gene_name": "COL18A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05107-1", "protein_name": "Integrin beta-2", "gene_name": "ITGB2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8344274", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 84 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A role for the dystrophin-glycoprotein complex as a transmembrane linker between laminin and actin.", "journal": "The Journal of cell biology", "date": "1993", "authors": "Ervasti JM, Campbell KP", "reference": { "type": "PubMed", "id": "8349731", "url": "https://pubmed.ncbi.nlm.nih.gov/8349731" }, "referenced_glycans": [ { "glytoucan_ac": "G59126YU" } ], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", 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"uniprot_canonical_ac": "Q04828-1", "protein_name": "Aldo-keto reductase family 1 member C1", "gene_name": "AKR1C1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02655-1", "protein_name": "Apolipoprotein C-II", "gene_name": "APOC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42330-1", "protein_name": "Aldo-keto reductase family 1 member C3", "gene_name": "AKR1C3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04118-1", "protein_name": "Colipase", "gene_name": "CLPS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51654-1", "protein_name": "Glypican-3", "gene_name": "GPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95237-1", "protein_name": "Lecithin retinol acyltransferase", "gene_name": "LRAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09455-1", "protein_name": "Retinol-binding protein 1", "gene_name": "RBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TC12-1", "protein_name": "Retinol dehydrogenase 11", "gene_name": "RDH11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50120-1", "protein_name": "Retinol-binding protein 2", "gene_name": "RBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6NUM9-1", "protein_name": "All-trans-retinol 13,14-reductase", "gene_name": "RETSAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18827-1", "protein_name": "Syndecan-1", "gene_name": "SDC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02656-1", "protein_name": "Apolipoprotein C-III", "gene_name": "APOC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02649-1", "protein_name": "Apolipoprotein E", "gene_name": "APOE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAY6-1", "protein_name": "Beta,beta-carotene 15,15'-dioxygenase", "gene_name": "BCO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02766-1", "protein_name": "Transthyretin", "gene_name": "TTR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31431-1", "protein_name": "Syndecan-4", "gene_name": "SDC4", "tax_name": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P25940-1", "protein_name": "Collagen alpha-3(V) chain", "gene_name": "COL5A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01955-1", "protein_name": "Collagen alpha-3(IV) chain", "gene_name": "COL4A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14118-1", "protein_name": "Dystroglycan 1", "gene_name": "DAG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07942-1", "protein_name": "Laminin subunit beta-1", "gene_name": "LAMB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24043-1", "protein_name": "Laminin subunit alpha-2", "gene_name": "LAMA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25391-1", "protein_name": "Laminin subunit alpha-1", "gene_name": "LAMA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11047-1", "protein_name": "Laminin subunit gamma-1", "gene_name": "LAMC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10600-1", "protein_name": "Transforming growth factor beta-3 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"ITGAV", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53708-1", "protein_name": "Integrin alpha-8", "gene_name": "ITGA8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21941-1", "protein_name": "Matrilin-1", "gene_name": "MATN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05556-1", "protein_name": "Integrin beta-1", "gene_name": "ITGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02461-1", "protein_name": "Collagen alpha-1(III) chain", "gene_name": "COL3A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29400-1", "protein_name": "Collagen alpha-5(IV) chain", "gene_name": "COL4A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14055-1", "protein_name": "Collagen alpha-2(IX) chain", "gene_name": "COL9A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09486-1", "protein_name": "SPARC", "gene_name": "SPARC", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8TX70-1", "protein_name": "Collagen alpha-5(VI) chain", "gene_name": "COL6A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05997-1", "protein_name": "Collagen alpha-2(V) chain", "gene_name": "COL5A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NMZ7-1", "protein_name": "Collagen alpha-6(VI) chain", "gene_name": "COL6A6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12111-1", "protein_name": "Collagen alpha-3(VI) chain", "gene_name": "COL6A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08123-1", "protein_name": "Collagen alpha-2(I) chain", "gene_name": "COL1A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12109-1", "protein_name": "Collagen alpha-1(VI) chain", "gene_name": "COL6A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02458-2", "protein_name": "Collagen alpha-1(II) chain", "gene_name": "COL2A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14050-1", "protein_name": "Collagen alpha-3(IX) chain", "gene_name": "COL9A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05106-1", "protein_name": "Integrin beta-3", "gene_name": "ITGB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13611-1", "protein_name": "Versican core protein", "gene_name": "VCAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07585-1", "protein_name": "Decorin", "gene_name": "DCN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04004-1", "protein_name": "Vitronectin", "gene_name": "VTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZW4-1", "protein_name": "Dentin sialophosphoprotein", "gene_name": "DSPP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13797-1", "protein_name": "Integrin alpha-9", "gene_name": "ITGA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96GW7-1", "protein_name": "Brevican core protein", "gene_name": "BCAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15146-1", "protein_name": "Muscle, skeletal receptor tyrosine-protein kinase", "gene_name": "MUSK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13332-1", "protein_name": "Receptor-type tyrosine-protein 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}, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Human lysozyme gene mutations cause hereditary systemic amyloidosis.", "journal": "Nature", "date": "1993", "authors": "Pepys MB, Hawkins PN, Booth DR, Vigushin DM, Tennent GA, Soutar AK, Totty N, Nguyen O, Blake CC, Terry CJ, et 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"Human" }, { "uniprot_canonical_ac": "P07942-1", "protein_name": "Laminin subunit beta-1", "gene_name": "LAMB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24043-1", "protein_name": "Laminin subunit alpha-2", "gene_name": "LAMA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25391-1", "protein_name": "Laminin subunit alpha-1", "gene_name": "LAMA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6N6-1", "protein_name": "Laminin subunit gamma-3", "gene_name": "LAMC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13753-1", "protein_name": "Laminin subunit gamma-2", "gene_name": "LAMC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11047-1", "protein_name": "Laminin subunit gamma-1", "gene_name": "LAMC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46939-1", "protein_name": "Utrophin", "gene_name": "UTRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY99-1", "protein_name": "Gamma-2-syntrophin", "gene_name": "SNTG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13751-1", "protein_name": "Laminin subunit beta-3", "gene_name": "LAMB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16787-2", "protein_name": "Laminin subunit alpha-3", "gene_name": "LAMA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16363-1", "protein_name": "Laminin subunit alpha-4", "gene_name": "LAMA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15230-1", "protein_name": "Laminin subunit alpha-5", "gene_name": "LAMA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4J8-1", "protein_name": "Dystrobrevin alpha", "gene_name": "DTNA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63267-1", "protein_name": "Actin, gamma-enteric smooth muscle", "gene_name": "ACTG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68032-1", "protein_name": "Actin, alpha cardiac muscle 1", "gene_name": "ACTC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13884-1", "protein_name": "Beta-1-syntrophin", "gene_name": "SNTB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13424-1", "protein_name": "Alpha-1-syntrophin", "gene_name": "SNTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13326-1", "protein_name": "Gamma-sarcoglycan", "gene_name": "SGCG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63261-1", "protein_name": "Actin, cytoplasmic 2", "gene_name": "ACTG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62736-1", "protein_name": "Actin, aortic smooth muscle", "gene_name": "ACTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11532-1", "protein_name": "Dystrophin", "gene_name": "DMD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13425-1", "protein_name": "Beta-2-syntrophin", "gene_name": "SNTB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13474-1", "protein_name": "Dystrophin-related protein 2", "gene_name": "DRP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55268-1", "protein_name": "Laminin subunit beta-2", "gene_name": "LAMB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60941-1", "protein_name": "Dystrobrevin beta", "gene_name": "DTNB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68133-1", "protein_name": "Actin, alpha skeletal muscle", "gene_name": "ACTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8607994", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 37 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"Matrix metalloproteinase-14", "gene_name": "MMP14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE57-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 16", "gene_name": "ADAMTS16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNA0-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 5", "gene_name": "ADAMTS5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6MZZ7-1", "protein_name": "Calpain-13", "gene_name": "CAPN13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07711-1", "protein_name": "Procathepsin L", "gene_name": "CTSL", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75808-1", "protein_name": "Calpain-15", "gene_name": "CAPN15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16070-1", "protein_name": "CD44 antigen", "gene_name": "CD44", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08311-1", "protein_name": "Cathepsin G", "gene_name": "CTSG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10451-1", "protein_name": "Osteopontin", "gene_name": "SPP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25774-1", "protein_name": "Cathepsin S", "gene_name": "CTSS", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15484-1", "protein_name": "Calpain-5", "gene_name": "CAPN5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60911-1", "protein_name": "Cathepsin L2", "gene_name": "CTSV", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07942-1", "protein_name": "Laminin subunit beta-1", "gene_name": "LAMB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49862-1", "protein_name": "Kallikrein-7", "gene_name": "KLK7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13753-1", "protein_name": "Laminin subunit gamma-2", "gene_name": "LAMC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11047-1", "protein_name": "Laminin subunit gamma-1", "gene_name": "LAMC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45452-1", "protein_name": "Collagenase 3", "gene_name": "MMP13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24347-1", "protein_name": "Stromelysin-3", "gene_name": "MMP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09238-1", "protein_name": "Stromelysin-2", "gene_name": "MMP10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51511-1", "protein_name": "Matrix metalloproteinase-15", "gene_name": "MMP15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96L46-1", "protein_name": "Calpain small subunit 2", "gene_name": "CAPNS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13751-1", "protein_name": "Laminin subunit beta-3", "gene_name": "LAMB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16787-2", "protein_name": "Laminin subunit alpha-3", "gene_name": "LAMA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15230-1", "protein_name": "Laminin subunit alpha-5", "gene_name": "LAMA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09237-1", "protein_name": "Matrilysin", "gene_name": "MMP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6L7-1", "protein_name": "Tolloid-like protein 2", "gene_name": "TLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42574-1", "protein_name": "Caspase-3", "gene_name": "CASP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00747-1", "protein_name": "Plasminogen", "gene_name": "PLG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14780-1", "protein_name": "Matrix metalloproteinase-9", "gene_name": "MMP9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07585-1", "protein_name": "Decorin", "gene_name": "DCN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6W3-1", "protein_name": "Calpain-7", "gene_name": "CAPN7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13497-1", "protein_name": "Bone morphogenetic protein 1", "gene_name": "BMP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NHC0-1", "protein_name": "Calpain-8", "gene_name": "CAPN8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14815-1", "protein_name": "Calpain-9", "gene_name": "CAPN9", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8MX76-1", "protein_name": "Calpain-14", "gene_name": "CAPN14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12830-1", "protein_name": "Cadherin-1", "gene_name": "CDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZSI9-1", "protein_name": "Calpain-12", "gene_name": "CAPN12", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17655-1", "protein_name": "Calpain-2 catalytic subunit", "gene_name": "CAPN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Q1-1", "protein_name": "Calpain-6", "gene_name": "CAPN6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08253-1", "protein_name": "72 kDa type IV collagenase", "gene_name": "MMP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IX30-1", "protein_name": "Signal peptide, CUB and EGF-like domain-containing protein 3", "gene_name": "SCUBE3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96GW7-1", "protein_name": "Brevican core protein", "gene_name": "BCAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE60-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 18", "gene_name": "ADAMTS18", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75173-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 4", "gene_name": "ADAMTS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2N4-3", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 9", "gene_name": "ADAMTS9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHI8-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 1", "gene_name": "ADAMTS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UP79-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 8", "gene_name": "ADAMTS8", "tax_name": "Human" }, { "uniprot_canonical_ac": 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}, { "uniprot_canonical_ac": "P00734-1", "protein_name": "Prothrombin", "gene_name": "F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02452-1", "protein_name": "Collagen alpha-1(I) chain", "gene_name": "COL1A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4KMQ2-1", "protein_name": "Anoctamin-6", "gene_name": "ANO6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00468-1", "protein_name": "Agrin", "gene_name": "AGRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q75V66-1", "protein_name": "Anoctamin-5", "gene_name": "ANO5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01008-1", "protein_name": "Antithrombin-III", "gene_name": "SERPINC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07093-1", "protein_name": "Glia-derived nexin", "gene_name": "SERPINE2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNN8-1", "protein_name": "Endothelial protein C receptor", "gene_name": "PROCR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30273-1", "protein_name": "High affinity immunoglobulin epsilon receptor subunit gamma", "gene_name": "FCER1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51654-1", "protein_name": "Glypican-3", "gene_name": "GPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07359-1", "protein_name": "Platelet glycoprotein Ib alpha chain", "gene_name": "GP1BA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13224-1", "protein_name": "Platelet glycoprotein Ib beta chain", "gene_name": "GP1BB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24158-1", "protein_name": "Myeloblastin", "gene_name": "PRTN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25116-1", "protein_name": "Proteinase-activated receptor 1", "gene_name": "F2R", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18827-1", "protein_name": "Syndecan-1", "gene_name": "SDC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04275-1", "protein_name": "von Willebrand factor", "gene_name": "VWF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17405-1", "protein_name": "Sphingomyelin phosphodiesterase", "gene_name": "SMPD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76LX8-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 13", "gene_name": "ADAMTS13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6Q3-1", "protein_name": "CD177 antigen", "gene_name": "CD177", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31431-1", "protein_name": "Syndecan-4", "gene_name": "SDC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y625-1", "protein_name": "Glypican-6", "gene_name": "GPC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05154-1", "protein_name": "Plasma serine protease inhibitor", "gene_name": "SERPINA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05155-1", "protein_name": "Plasma protease C1 inhibitor", "gene_name": "SERPING1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N158-1", "protein_name": "Glypican-2", "gene_name": "GPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75578-1", "protein_name": "Integrin alpha-10", "gene_name": "ITGA10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P03951-1", "protein_name": "Coagulation factor XI", "gene_name": "F11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00740-1", "protein_name": "Coagulation factor IX", "gene_name": "F9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02776-1", "protein_name": "Platelet factor 4", "gene_name": "PF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07948-1", "protein_name": "Tyrosine-protein kinase Lyn", "gene_name": "LYN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05556-1", "protein_name": "Integrin beta-1", "gene_name": "ITGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08123-1", "protein_name": "Collagen alpha-2(I) chain", "gene_name": "COL1A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04070-1", "protein_name": "Vitamin K-dependent protein C", "gene_name": "PROC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34741-1", "protein_name": "Syndecan-2", "gene_name": "SDC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCN6-1", "protein_name": "Platelet glycoprotein VI", "gene_name": "GP6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78333-1", "protein_name": "Glypican-5", "gene_name": "GPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35052-1", "protein_name": "Glypican-1", "gene_name": "GPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UK55-1", "protein_name": "Protein Z-dependent protease inhibitor", "gene_name": "SERPINA10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10720-1", "protein_name": "Platelet factor 4 variant", "gene_name": "PF4V1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07225-1", "protein_name": "Vitamin K-dependent protein S", "gene_name": "PROS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05546-1", "protein_name": "Heparin cofactor 2", "gene_name": "SERPIND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17301-1", "protein_name": "Integrin alpha-2", "gene_name": "ITGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56199-1", "protein_name": "Integrin alpha-1", "gene_name": "ITGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22891-1", "protein_name": "Vitamin K-dependent protein Z", "gene_name": "PROZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00742-1", "protein_name": "Coagulation factor X", "gene_name": "F10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75487-1", "protein_name": "Glypican-4", "gene_name": "GPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14770-1", "protein_name": "Platelet glycoprotein IX", "gene_name": "GP9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40197-1", "protein_name": "Platelet glycoprotein V", "gene_name": "GP5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08709-1", "protein_name": "Coagulation factor VII", "gene_name": "F7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13726-1", "protein_name": "Tissue factor", "gene_name": "F3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05067-1", "protein_name": "Amyloid-beta precursor protein", "gene_name": "APP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06241-1", "protein_name": "Tyrosine-protein kinase Fyn", "gene_name": "FYN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05121-1", "protein_name": "Plasminogen activator inhibitor 1", "gene_name": "SERPINE1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8639781", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 57 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Lipoprotein lipase-mediated uptake of lipoprotein in human fibroblasts: evidence for an LDL receptor-independent internalization pathway.", "journal": "Journal of lipid research", "date": "1996", "authors": "Fernandez-Borja M, Bellido D, Vilella E, Olivecrona G, Vilaro S", "reference": { "type": "PubMed", "id": "8728311", "url": "https://pubmed.ncbi.nlm.nih.gov/8728311" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02753-1", "protein_name": "Retinol-binding protein 4", "gene_name": "RBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75056-1", "protein_name": "Syndecan-3", "gene_name": "SDC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00468-1", "protein_name": "Agrin", "gene_name": "AGRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17516-1", "protein_name": "Aldo-keto reductase family 1 member C4", "gene_name": "AKR1C4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04114-1", "protein_name": "Apolipoprotein B-100", "gene_name": "APOB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07954-1", "protein_name": "Prolow-density lipoprotein receptor-related protein 1", "gene_name": "LRP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95445-1", "protein_name": "Apolipoprotein M", "gene_name": "APOM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q04828-1", "protein_name": "Aldo-keto reductase family 1 member C1", "gene_name": "AKR1C1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02655-1", "protein_name": "Apolipoprotein C-II", "gene_name": "APOC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42330-1", "protein_name": "Aldo-keto reductase family 1 member C3", "gene_name": "AKR1C3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04118-1", "protein_name": "Colipase", "gene_name": "CLPS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51654-1", "protein_name": "Glypican-3", "gene_name": "GPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95237-1", "protein_name": "Lecithin retinol acyltransferase", "gene_name": "LRAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09455-1", "protein_name": "Retinol-binding protein 1", "gene_name": "RBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TC12-1", "protein_name": "Retinol dehydrogenase 11", "gene_name": "RDH11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50120-1", "protein_name": "Retinol-binding protein 2", "gene_name": "RBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6NUM9-1", "protein_name": "All-trans-retinol 13,14-reductase", "gene_name": "RETSAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18827-1", "protein_name": "Syndecan-1", "gene_name": "SDC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02656-1", "protein_name": "Apolipoprotein C-III", "gene_name": "APOC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02649-1", "protein_name": "Apolipoprotein E", "gene_name": "APOE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAY6-1", "protein_name": "Beta,beta-carotene 15,15'-dioxygenase", "gene_name": "BCO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02766-1", "protein_name": "Transthyretin", "gene_name": "TTR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31431-1", "protein_name": "Syndecan-4", "gene_name": "SDC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16233-1", "protein_name": "Pancreatic triacylglycerol lipase", "gene_name": "PNLIP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y625-1", "protein_name": "Glypican-6", "gene_name": "GPC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N158-1", "protein_name": "Glypican-2", "gene_name": "GPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y561-1", "protein_name": "Low-density lipoprotein receptor-related protein 12", "gene_name": "LRP12", "tax_name": "Human" }, { "uniprot_canonical_ac": "P98164-1", "protein_name": "Low-density lipoprotein receptor-related protein 2", "gene_name": "LRP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02652-1", "protein_name": "Apolipoprotein A-II", "gene_name": "APOA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14114-1", "protein_name": "Low-density lipoprotein receptor-related protein 8", "gene_name": "LRP8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06727-1", "protein_name": "Apolipoprotein A-IV", "gene_name": "APOA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6Q788-1", "protein_name": "Apolipoprotein A-V", "gene_name": "APOA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01130-1", "protein_name": "Low-density lipoprotein receptor", "gene_name": "LDLR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34741-1", "protein_name": "Syndecan-2", "gene_name": "SDC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78333-1", "protein_name": "Glypican-5", "gene_name": "GPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35052-1", "protein_name": "Glypican-1", "gene_name": "GPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P1J6-1", "protein_name": "Phospholipase B1, membrane-associated", "gene_name": "PLB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BYV7-1", "protein_name": "Carotenoid-cleaving dioxygenase, mitochondrial", "gene_name": "BCO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75487-1", "protein_name": "Glypican-4", "gene_name": "GPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV16-1", "protein_name": "Glycosylphosphatidylinositol-anchored high density lipoprotein-binding protein 1", "gene_name": "GPIHBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06858-1", "protein_name": "Lipoprotein lipase", "gene_name": "LPL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4F1-1", "protein_name": "Low-density lipoprotein receptor-related protein 10", "gene_name": "LRP10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02647-1", "protein_name": "Apolipoprotein A-I", "gene_name": "APOA1", "tax_name": "Human" }, { 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[] } ] }, { "title": "Dystroglycan is a dual receptor for agrin and laminin-2 in Schwann cell membrane.", "journal": "The Journal of biological chemistry", "date": "1996-09-20", "authors": "Yamada H, Denzer A J, Hori H, Tanaka T, Anderson L V, Fujita S, Fukuta-Ohi H, Shimizu T, Ruegg M A, Matsumura K", "reference": { "type": "PubMed", "id": "8798547", "url": "https://pubmed.ncbi.nlm.nih.gov/8798547" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43556-1", "protein_name": "Epsilon-sarcoglycan", "gene_name": "SGCE", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00468-1", "protein_name": "Agrin", "gene_name": "AGRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O18738-1", "protein_name": "Dystroglycan 1", "gene_name": "DAG1", "tax_name": "Bovine" }, { "uniprot_canonical_ac": 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"gene_name": "LAMA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15230-1", "protein_name": "Laminin subunit alpha-5", "gene_name": "LAMA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4J8-1", "protein_name": "Dystrobrevin alpha", "gene_name": "DTNA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63267-1", "protein_name": "Actin, gamma-enteric smooth muscle", "gene_name": "ACTG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68032-1", "protein_name": "Actin, alpha cardiac muscle 1", "gene_name": "ACTC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13884-1", "protein_name": "Beta-1-syntrophin", "gene_name": "SNTB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13424-1", "protein_name": "Alpha-1-syntrophin", "gene_name": "SNTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13326-1", "protein_name": "Gamma-sarcoglycan", "gene_name": "SGCG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63261-1", "protein_name": "Actin, cytoplasmic 2", "gene_name": "ACTG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62736-1", "protein_name": "Actin, aortic smooth muscle", "gene_name": "ACTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11532-1", "protein_name": "Dystrophin", "gene_name": "DMD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13425-1", "protein_name": "Beta-2-syntrophin", "gene_name": "SNTB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13474-1", "protein_name": "Dystrophin-related protein 2", "gene_name": "DRP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55268-1", "protein_name": "Laminin subunit beta-2", "gene_name": "LAMB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60941-1", "protein_name": "Dystrobrevin beta", "gene_name": "DTNB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68133-1", "protein_name": "Actin, alpha skeletal muscle", "gene_name": "ACTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8798547", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 37 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", 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Roles of the beta subunit extracellular and cytoplasmic domains.", "journal": "The Journal of biological chemistry", "date": "1996", "authors": "Yokosaki Y, Monis H, Chen J, Sheppard D", "reference": { "type": "PubMed", "id": "8798654", "url": "https://pubmed.ncbi.nlm.nih.gov/8798654" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02452-1", "protein_name": "Collagen alpha-1(I) chain", "gene_name": "COL1A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18084-1", "protein_name": "Integrin beta-5", "gene_name": "ITGB5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02671-1", "protein_name": "Fibrinogen alpha chain", "gene_name": "FGA", "tax_name": "Human" }, { 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"table_stats": [ { "field": "total", "count": 120 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of alpha v beta 3 as a heterotypic ligand for CD31/PECAM-1.", "journal": "Journal of cell science", "date": "1996", "authors": "Buckley CD, Doyonnas R, Newton JP, Blystone SD, Brown EJ, Watt SM, Simmons DL", "reference": { "type": "PubMed", "id": "8838667", "url": "https://pubmed.ncbi.nlm.nih.gov/8838667" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": 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"count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cloning and characterization of the human homologue of a dystrophin related phosphoprotein found at the Torpedo electric organ post-synaptic membrane.", "journal": "Human molecular genetics", "date": "1996-04", "authors": "Sadoulet-Puccio H M, Khurana T S, Cohen J B, Kunkel L M", "reference": { "type": "PubMed", "id": "8845841", "url": "https://pubmed.ncbi.nlm.nih.gov/8845841" }, 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"UTRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY99-1", "protein_name": "Gamma-2-syntrophin", "gene_name": "SNTG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13751-1", "protein_name": "Laminin subunit beta-3", "gene_name": "LAMB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16787-2", "protein_name": "Laminin subunit alpha-3", "gene_name": "LAMA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16363-1", "protein_name": "Laminin subunit alpha-4", "gene_name": "LAMA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15230-1", "protein_name": "Laminin subunit alpha-5", "gene_name": "LAMA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4J8-1", "protein_name": "Dystrobrevin alpha", "gene_name": "DTNA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63267-1", "protein_name": "Actin, gamma-enteric smooth muscle", "gene_name": "ACTG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68032-1", "protein_name": "Actin, alpha cardiac muscle 1", "gene_name": "ACTC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13884-1", "protein_name": "Beta-1-syntrophin", "gene_name": "SNTB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13424-1", "protein_name": "Alpha-1-syntrophin", "gene_name": "SNTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13326-1", "protein_name": "Gamma-sarcoglycan", "gene_name": "SGCG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63261-1", "protein_name": "Actin, cytoplasmic 2", "gene_name": "ACTG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62736-1", "protein_name": "Actin, aortic smooth muscle", "gene_name": "ACTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11532-1", "protein_name": "Dystrophin", "gene_name": "DMD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13425-1", "protein_name": "Beta-2-syntrophin", "gene_name": "SNTB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13474-1", "protein_name": "Dystrophin-related protein 2", "gene_name": "DRP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55268-1", "protein_name": "Laminin subunit beta-2", "gene_name": "LAMB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60941-1", "protein_name": "Dystrobrevin beta", "gene_name": "DTNB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68133-1", "protein_name": "Actin, alpha skeletal muscle", "gene_name": "ACTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8845841", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 36 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Localized amyloidosis of the seminal vesicle: identification of lactoferrin immunoreactivity in the amyloid material.", "journal": "Pathology international", "date": "1996", "authors": "Tsutsumi Y, Serizawa A, Hori S", "reference": { "type": "PubMed", "id": "8870004", "url": "https://pubmed.ncbi.nlm.nih.gov/8870004" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", 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"protein_name": "Gamma-secretase subunit APH-1A", "gene_name": "APH1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14933-1", "protein_name": "Ubiquitin/ISG15-conjugating enzyme E2 L6", "gene_name": "UBE2L6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09958-1", "protein_name": "Furin", "gene_name": "FURIN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C0S5-1", "protein_name": "Histone H2A.Z", "gene_name": "H2AZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZ42-1", "protein_name": "Gamma-secretase subunit PEN-2", "gene_name": "PSENEN", "tax_name": "Human" }, { "uniprot_canonical_ac": "A1E959-1", "protein_name": "Odontogenic ameloblast-associated protein", "gene_name": "ODAM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10997-1", "protein_name": "Islet amyloid polypeptide", "gene_name": "IAPP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02743-1", "protein_name": "Serum amyloid P-component", "gene_name": "APCS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01236-1", "protein_name": "Prolactin", "gene_name": "PRL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6H5-1", "protein_name": "Synphilin-1", "gene_name": "SNCAIP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92673-1", "protein_name": "Sortilin-related receptor", "gene_name": "SORL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15582-1", "protein_name": "Transforming growth factor-beta-induced protein ig-h3", "gene_name": "TGFBI", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02649-1", "protein_name": "Apolipoprotein E", "gene_name": "APOE", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01258-1", "protein_name": "Calcitonin", "gene_name": "CALCA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJY5-1", "protein_name": "ADP-ribosylation factor-binding protein GGA1", "gene_name": "GGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05937-1", "protein_name": "Calbindin", "gene_name": "CALB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02766-1", "protein_name": "Transthyretin", "gene_name": "TTR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y287-1", "protein_name": "Integral membrane protein 2B", "gene_name": "ITM2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43255-1", "protein_name": "E3 ubiquitin-protein ligase SIAH2", "gene_name": "SIAH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62079-1", "protein_name": "Tetraspanin-5", "gene_name": "TSPAN5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86UF1-1", "protein_name": "Tetraspanin-33", "gene_name": "TSPAN33", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone 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{ "uniprot_canonical_ac": "O60260-1", "protein_name": "E3 ubiquitin-protein ligase parkin", "gene_name": "PRKN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01034-1", "protein_name": "Cystatin-C", "gene_name": "CST3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZ52-1", "protein_name": "ADP-ribosylation factor-binding protein GGA3", "gene_name": "GGA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJY4-1", "protein_name": "ADP-ribosylation factor-binding protein GGA2", "gene_name": "GGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P78333-1", "protein_name": "Glypican-5", "gene_name": "GPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35052-1", "protein_name": "Glypican-1", "gene_name": "GPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75487-1", "protein_name": "Glypican-4", "gene_name": "GPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93063-1", "protein_name": "Exostosin-2", "gene_name": "EXT2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8894688", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 14 } ], "sort_fields": [ 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"gene_name": "COL13A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08123-1", "protein_name": "Collagen alpha-2(I) chain", "gene_name": "COL1A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12109-1", "protein_name": "Collagen alpha-1(VI) chain", "gene_name": "COL6A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02458-2", "protein_name": "Collagen alpha-1(II) chain", "gene_name": "COL2A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14050-1", "protein_name": "Collagen alpha-3(IX) chain", "gene_name": "COL9A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02675-1", "protein_name": "Fibrinogen beta chain", "gene_name": "FGB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26010-1", "protein_name": "Integrin beta-7", "gene_name": "ITGB7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05106-1", "protein_name": "Integrin 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"gene_name": "FBN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13598-1", "protein_name": "Intercellular adhesion molecule 2", "gene_name": "ICAM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24821-1", "protein_name": "Tenascin", "gene_name": "TNC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39060-3", "protein_name": "Collagen alpha-1(XVIII) chain", "gene_name": "COL18A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05107-1", "protein_name": "Integrin beta-2", "gene_name": "ITGB2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8910476", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 84 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Interaction of cartilage matrix protein with aggrecan. Increased covalent cross-linking with tissue maturation.", "journal": "The Journal of biological chemistry", "date": "1996", "authors": "Hauser N, Paulsson M, Heinegard D, Morgelin M", "reference": { "type": "PubMed", "id": "8943283", "url": "https://pubmed.ncbi.nlm.nih.gov/8943283" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02452-1", "protein_name": "Collagen alpha-1(I) chain", "gene_name": "COL1A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18084-1", "protein_name": "Integrin beta-5", "gene_name": "ITGB5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00468-1", "protein_name": "Agrin", "gene_name": "AGRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02751-15", "protein_name": "Fibronectin", "gene_name": "FN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21810-1", "protein_name": "Biglycan", "gene_name": "BGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92752-1", "protein_name": "Tenascin-R", "gene_name": "TNR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UQP3-1", "protein_name": "Tenascin-N", "gene_name": "TNN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53420-1", "protein_name": "Collagen alpha-4(IV) chain", "gene_name": "COL4A4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13608-1", "protein_name": "Aggrecan core protein", "gene_name": "ACAN", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "Q06828-1", "protein_name": "Fibromodulin", "gene_name": "FMOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75096-1", "protein_name": "Low-density lipoprotein receptor-related protein 4", "gene_name": "LRP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10915-1", "protein_name": "Hyaluronan and proteoglycan link protein 1", "gene_name": "HAPLN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16112-1", "protein_name": "Aggrecan core protein", "gene_name": "ACAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21815-1", "protein_name": "Integrin-binding sialoprotein", "gene_name": "IBSP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49747-1", "protein_name": "Cartilage oligomeric matrix protein", "gene_name": "COMP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXN1-1", "protein_name": "Asporin", "gene_name": "ASPN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12110-1", "protein_name": "Collagen alpha-2(VI) chain", "gene_name": "COL6A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14031-1", "protein_name": "Collagen alpha-6(IV) chain", "gene_name": "COL4A6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20908-1", "protein_name": "Collagen alpha-1(V) chain", "gene_name": "COL5A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02462-1", "protein_name": "Collagen alpha-1(IV) chain", "gene_name": "COL4A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08572-1", "protein_name": "Collagen alpha-2(IV) chain", "gene_name": "COL4A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20849-1", "protein_name": "Collagen alpha-1(IX) chain", "gene_name": "COL9A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25940-1", "protein_name": "Collagen alpha-3(V) chain", "gene_name": "COL5A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01955-1", "protein_name": "Collagen alpha-3(IV) chain", "gene_name": "COL4A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14118-1", "protein_name": "Dystroglycan 1", "gene_name": "DAG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07942-1", "protein_name": "Laminin subunit beta-1", "gene_name": "LAMB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24043-1", "protein_name": "Laminin subunit alpha-2", "gene_name": "LAMA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25391-1", "protein_name": "Laminin subunit alpha-1", "gene_name": "LAMA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11047-1", "protein_name": "Laminin subunit gamma-1", "gene_name": "LAMC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10600-1", "protein_name": "Transforming growth factor beta-3 proprotein", "gene_name": "TGFB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "E1BMV3-1", "protein_name": "Matrilin-1", "gene_name": "MATN1", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "Q13683-1", "protein_name": "Integrin alpha-7", "gene_name": "ITGA7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16787-2", "protein_name": "Laminin subunit alpha-3", "gene_name": "LAMA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18564-1", "protein_name": "Integrin beta-6", "gene_name": "ITGB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16363-1", "protein_name": "Laminin subunit alpha-4", "gene_name": "LAMA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15230-1", "protein_name": "Laminin subunit alpha-5", "gene_name": "LAMA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95460-1", "protein_name": "Matrilin-4", "gene_name": "MATN4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08514-1", "protein_name": "Integrin alpha-IIb", "gene_name": "ITGA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06756-1", "protein_name": "Integrin alpha-V", "gene_name": "ITGAV", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53708-1", "protein_name": "Integrin alpha-8", "gene_name": "ITGA8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21941-1", "protein_name": "Matrilin-1", "gene_name": "MATN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05556-1", "protein_name": "Integrin beta-1", "gene_name": "ITGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02461-1", "protein_name": "Collagen alpha-1(III) chain", "gene_name": "COL3A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29400-1", "protein_name": "Collagen alpha-5(IV) chain", "gene_name": "COL4A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14055-1", "protein_name": "Collagen alpha-2(IX) chain", "gene_name": "COL9A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09486-1", "protein_name": "SPARC", "gene_name": "SPARC", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8TX70-1", "protein_name": "Collagen alpha-5(VI) chain", "gene_name": "COL6A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05997-1", "protein_name": "Collagen alpha-2(V) chain", "gene_name": "COL5A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NMZ7-1", "protein_name": "Collagen alpha-6(VI) chain", "gene_name": "COL6A6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12111-1", "protein_name": "Collagen alpha-3(VI) chain", "gene_name": "COL6A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08123-1", "protein_name": "Collagen alpha-2(I) chain", "gene_name": "COL1A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12109-1", "protein_name": "Collagen alpha-1(VI) chain", "gene_name": "COL6A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02458-2", "protein_name": "Collagen alpha-1(II) chain", "gene_name": "COL2A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14050-1", "protein_name": "Collagen alpha-3(IX) chain", "gene_name": "COL9A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05106-1", "protein_name": "Integrin beta-3", "gene_name": "ITGB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13611-1", "protein_name": "Versican core protein", "gene_name": "VCAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07585-1", "protein_name": "Decorin", "gene_name": "DCN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04004-1", "protein_name": "Vitronectin", "gene_name": "VTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZW4-1", "protein_name": "Dentin sialophosphoprotein", "gene_name": "DSPP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13797-1", "protein_name": "Integrin alpha-9", "gene_name": "ITGA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96GW7-1", "protein_name": "Brevican core protein", "gene_name": "BCAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15146-1", "protein_name": "Muscle, skeletal receptor tyrosine-protein kinase", "gene_name": "MUSK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13332-1", "protein_name": "Receptor-type tyrosine-protein phosphatase S", "gene_name": "PTPRS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20702-1", "protein_name": "Integrin alpha-X", "gene_name": "ITGAX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17301-1", "protein_name": "Integrin alpha-2", "gene_name": "ITGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15232-1", "protein_name": "Matrilin-3", "gene_name": "MATN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22105-3", "protein_name": "Tenascin-X", "gene_name": "TNXB", "tax_name": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08431-1", "protein_name": "Lactadherin", "gene_name": "MFGE8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05067-1", "protein_name": "Amyloid-beta precursor protein", "gene_name": "APP", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14672-1", "protein_name": "Disintegrin and metalloproteinase domain-containing protein 10", "gene_name": "ADAM10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02647-1", "protein_name": "Apolipoprotein A-I", "gene_name": "APOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUQ4-1", "protein_name": "E3 ubiquitin-protein ligase SIAH1", "gene_name": "SIAH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P37840-1", "protein_name": "Alpha-synuclein", "gene_name": "SNCA", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": 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"uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93008-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 9X", "gene_name": "USP9X", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NG11-1", "protein_name": "Tetraspanin-14", "gene_name": "TSPAN14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHE5-1", "protein_name": "N-acetyltransferase 8", "gene_name": "NAT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHF3-1", "protein_name": "N-acetyltransferase 8B", "gene_name": "NAT8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56817-1", "protein_name": "Beta-secretase 1", "gene_name": "BACE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01308-1", "protein_name": "Insulin", "gene_name": "INS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08431-1", "protein_name": "Lactadherin", "gene_name": "MFGE8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05067-1", "protein_name": "Amyloid-beta precursor protein", "gene_name": "APP", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14672-1", "protein_name": "Disintegrin and metalloproteinase domain-containing protein 10", "gene_name": "ADAM10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02647-1", "protein_name": "Apolipoprotein A-I", "gene_name": "APOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUQ4-1", "protein_name": "E3 ubiquitin-protein ligase SIAH1", "gene_name": "SIAH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P37840-1", "protein_name": "Alpha-synuclein", "gene_name": "SNCA", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9054935", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 80 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The role of the C-terminal domain of human collagenase-3 (MMP-13) in the activation of procollagenase-3, substrate specificity, and tissue inhibitor of metalloproteinase interaction.", "journal": "The Journal of biological chemistry", "date": "1997", "authors": "Knauper V, Cowell S, Smith B, Lopez-Otin C, O'Shea M, Morris H, Zardi L, Murphy G", "reference": { "type": "PubMed", "id": "9065415", "url": "https://pubmed.ncbi.nlm.nih.gov/9065415" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15502-3", "protein_name": "Elastin", "gene_name": "ELN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43897-1", "protein_name": "Tolloid-like protein 1", "gene_name": "TLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13444-1", "protein_name": "Disintegrin and metalloproteinase domain-containing protein 15", "gene_name": "ADAM15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92542-1", "protein_name": "Nicastrin", "gene_name": "NCSTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02751-15", "protein_name": "Fibronectin", "gene_name": "FN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04632-1", "protein_name": "Calpain small subunit 1", "gene_name": "CAPNS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08246-1", "protein_name": "Neutrophil elastase", "gene_name": "ELANE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92743-1", "protein_name": "Serine protease HTRA1", "gene_name": "HTRA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBM4-1", "protein_name": "Opticin", "gene_name": "OPTC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16112-1", "protein_name": "Aggrecan core protein", "gene_name": "ACAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P03956-1", "protein_name": "Interstitial collagenase", "gene_name": "MMP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39900-1", "protein_name": "Macrophage metalloelastase", "gene_name": "MMP12", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14543-1", "protein_name": "Nidogen-1", "gene_name": "NID1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWY4-1", "protein_name": "Signal peptide, CUB and EGF-like domain-containing protein 1", "gene_name": "SCUBE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35613-1", "protein_name": "Basigin", "gene_name": "BSG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50281-1", "protein_name": "Matrix metalloproteinase-14", "gene_name": "MMP14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01033-1", "protein_name": "Metalloproteinase inhibitor 1", "gene_name": "TIMP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE57-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 16", "gene_name": "ADAMTS16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNA0-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 5", "gene_name": "ADAMTS5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6MZZ7-1", "protein_name": "Calpain-13", "gene_name": "CAPN13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07711-1", "protein_name": "Procathepsin L", "gene_name": "CTSL", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75808-1", "protein_name": "Calpain-15", "gene_name": "CAPN15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16070-1", "protein_name": "CD44 antigen", "gene_name": "CD44", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08311-1", "protein_name": "Cathepsin G", "gene_name": "CTSG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10451-1", "protein_name": "Osteopontin", "gene_name": "SPP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25774-1", "protein_name": "Cathepsin S", "gene_name": "CTSS", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15484-1", "protein_name": "Calpain-5", "gene_name": "CAPN5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60911-1", "protein_name": "Cathepsin L2", "gene_name": "CTSV", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07942-1", "protein_name": "Laminin subunit beta-1", "gene_name": "LAMB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49862-1", "protein_name": "Kallikrein-7", "gene_name": "KLK7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13753-1", "protein_name": "Laminin subunit gamma-2", "gene_name": "LAMC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11047-1", "protein_name": "Laminin subunit gamma-1", "gene_name": "LAMC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45452-1", "protein_name": "Collagenase 3", "gene_name": "MMP13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24347-1", "protein_name": "Stromelysin-3", "gene_name": "MMP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09238-1", "protein_name": "Stromelysin-2", "gene_name": "MMP10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51511-1", "protein_name": "Matrix metalloproteinase-15", "gene_name": "MMP15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96L46-1", "protein_name": "Calpain small subunit 2", "gene_name": "CAPNS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13751-1", "protein_name": "Laminin subunit beta-3", "gene_name": "LAMB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16787-2", "protein_name": "Laminin subunit alpha-3", "gene_name": "LAMA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15230-1", "protein_name": "Laminin subunit alpha-5", "gene_name": "LAMA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09237-1", "protein_name": "Matrilysin", "gene_name": "MMP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6L7-1", "protein_name": "Tolloid-like protein 2", "gene_name": "TLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42574-1", "protein_name": "Caspase-3", "gene_name": "CASP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00747-1", "protein_name": "Plasminogen", "gene_name": "PLG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14780-1", "protein_name": "Matrix metalloproteinase-9", "gene_name": "MMP9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07585-1", "protein_name": "Decorin", "gene_name": "DCN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6W3-1", "protein_name": "Calpain-7", "gene_name": "CAPN7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13497-1", "protein_name": "Bone morphogenetic protein 1", "gene_name": "BMP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NHC0-1", "protein_name": "Calpain-8", "gene_name": "CAPN8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14815-1", "protein_name": "Calpain-9", "gene_name": "CAPN9", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8MX76-1", "protein_name": "Calpain-14", "gene_name": "CAPN14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12830-1", "protein_name": "Cadherin-1", "gene_name": "CDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZSI9-1", "protein_name": "Calpain-12", "gene_name": "CAPN12", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17655-1", "protein_name": "Calpain-2 catalytic subunit", "gene_name": "CAPN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Q1-1", "protein_name": "Calpain-6", "gene_name": "CAPN6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08253-1", "protein_name": "72 kDa type IV collagenase", "gene_name": "MMP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IX30-1", "protein_name": "Signal peptide, CUB and EGF-like domain-containing protein 3", "gene_name": "SCUBE3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96GW7-1", "protein_name": "Brevican core protein", "gene_name": "BCAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE60-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 18", "gene_name": "ADAMTS18", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75173-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 4", "gene_name": "ADAMTS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2N4-3", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 9", "gene_name": "ADAMTS9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHI8-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 1", "gene_name": "ADAMTS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UP79-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 8", "gene_name": "ADAMTS8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20807-1", "protein_name": "Calpain-3", "gene_name": "CAPN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07384-1", "protein_name": "Calpain-1 catalytic subunit", "gene_name": "CAPN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC96-1", "protein_name": "Calpain-10", "gene_name": "CAPN10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43235-1", "protein_name": "Cathepsin K", "gene_name": "CTSK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMQ6-1", "protein_name": "Calpain-11", "gene_name": "CAPN11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35555-1", "protein_name": "Fibrillin-1", "gene_name": "FBN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35556-1", "protein_name": "Fibrillin-2", "gene_name": "FBN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q75N90-1", "protein_name": "Fibrillin-3", "gene_name": "FBN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20810-1", "protein_name": "Calpastatin", "gene_name": "CAST", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08254-1", "protein_name": "Stromelysin-1", "gene_name": "MMP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22894-1", "protein_name": "Neutrophil collagenase", "gene_name": "MMP8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99542-1", "protein_name": "Matrix metalloproteinase-19", "gene_name": "MMP19", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60882-1", "protein_name": "Matrix metalloproteinase-20", "gene_name": "MMP20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IU80-4", "protein_name": "Transmembrane protease serine 6", "gene_name": "TMPRSS6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49768-1", "protein_name": "Presenilin-1", "gene_name": "PSEN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14672-1", "protein_name": 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"protein_name": "Osteopontin", "gene_name": "SPP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25774-1", "protein_name": "Cathepsin S", "gene_name": "CTSS", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15484-1", "protein_name": "Calpain-5", "gene_name": "CAPN5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60911-1", "protein_name": "Cathepsin L2", "gene_name": "CTSV", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07942-1", "protein_name": "Laminin subunit beta-1", "gene_name": "LAMB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49862-1", "protein_name": "Kallikrein-7", "gene_name": "KLK7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13753-1", "protein_name": "Laminin subunit gamma-2", "gene_name": "LAMC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11047-1", "protein_name": "Laminin subunit gamma-1", "gene_name": "LAMC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45452-1", "protein_name": "Collagenase 3", "gene_name": "MMP13", 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{ "uniprot_canonical_ac": "Q9Y6L7-1", "protein_name": "Tolloid-like protein 2", "gene_name": "TLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42574-1", "protein_name": "Caspase-3", "gene_name": "CASP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00747-1", "protein_name": "Plasminogen", "gene_name": "PLG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14780-1", "protein_name": "Matrix metalloproteinase-9", "gene_name": "MMP9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07585-1", "protein_name": "Decorin", "gene_name": "DCN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6W3-1", "protein_name": "Calpain-7", "gene_name": "CAPN7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13497-1", "protein_name": "Bone morphogenetic protein 1", "gene_name": "BMP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NHC0-1", "protein_name": "Calpain-8", "gene_name": "CAPN8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14815-1", "protein_name": 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[] } ] }, { "title": "Differential association of syntrophin pairs with the dystrophin complex.", "journal": "The Journal of cell biology", "date": "1997-07-14", "authors": "Peters M F, Adams M E, Froehner S C", "reference": { "type": "PubMed", "id": "9214383", "url": "https://pubmed.ncbi.nlm.nih.gov/9214383" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43556-1", "protein_name": "Epsilon-sarcoglycan", "gene_name": "SGCE", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00468-1", "protein_name": "Agrin", "gene_name": "AGRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16585-1", "protein_name": "Beta-sarcoglycan", "gene_name": "SGCB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14714-1", "protein_name": "Sarcospan", "gene_name": "SSPN", "tax_name": "Human" }, { 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}, { "uniprot_canonical_ac": "P03951-1", "protein_name": "Coagulation factor XI", "gene_name": "F11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00740-1", "protein_name": "Coagulation factor IX", "gene_name": "F9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02776-1", "protein_name": "Platelet factor 4", "gene_name": "PF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04070-1", "protein_name": "Vitamin K-dependent protein C", "gene_name": "PROC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34741-1", "protein_name": "Syndecan-2", "gene_name": "SDC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78333-1", "protein_name": "Glypican-5", "gene_name": "GPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35052-1", 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"reference": { "type": "PubMed", "id": "9245798", "url": "https://pubmed.ncbi.nlm.nih.gov/9245798" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16144-1", "protein_name": "Integrin beta-4", "gene_name": "ITGB4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53420-1", "protein_name": "Collagen alpha-4(IV) chain", "gene_name": "COL4A4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14543-1", "protein_name": "Nidogen-1", "gene_name": "NID1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14112-1", "protein_name": "Nidogen-2", "gene_name": "NID2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14031-1", "protein_name": "Collagen alpha-6(IV) chain", "gene_name": "COL4A6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02462-1", "protein_name": "Collagen alpha-1(IV) 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"Q9Y624-1", "protein_name": "Junctional adhesion molecule A", "gene_name": "F11R", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35613-1", "protein_name": "Basigin", "gene_name": "BSG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21815-1", "protein_name": "Integrin-binding sialoprotein", "gene_name": "IBSP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49747-1", "protein_name": "Cartilage oligomeric matrix protein", "gene_name": "COMP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04275-1", "protein_name": "von Willebrand factor", "gene_name": "VWF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07996-1", "protein_name": "Thrombospondin-1", "gene_name": "THBS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16070-1", "protein_name": "CD44 antigen", "gene_name": "CD44", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10451-1", "protein_name": "Osteopontin", "gene_name": "SPP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12110-1", "protein_name": "Collagen alpha-2(VI) chain", "gene_name": "COL6A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14031-1", "protein_name": "Collagen alpha-6(IV) chain", "gene_name": "COL4A6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20908-1", "protein_name": "Collagen alpha-1(V) chain", "gene_name": "COL5A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02462-1", "protein_name": "Collagen alpha-1(IV) chain", "gene_name": "COL4A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27658-1", "protein_name": "Collagen alpha-1(VIII) chain", "gene_name": "COL8A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08572-1", "protein_name": "Collagen alpha-2(IV) chain", "gene_name": "COL4A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25067-1", "protein_name": "Collagen alpha-2(VIII) chain", "gene_name": "COL8A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20849-1", "protein_name": "Collagen alpha-1(IX) chain", "gene_name": "COL9A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25940-1", "protein_name": "Collagen alpha-3(V) chain", "gene_name": "COL5A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01955-1", "protein_name": "Collagen alpha-3(IV) chain", "gene_name": "COL4A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16284-1", "protein_name": "Platelet endothelial cell adhesion molecule", "gene_name": "PECAM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35968-1", "protein_name": "Vascular endothelial growth factor receptor 2", "gene_name": "KDR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13683-1", "protein_name": "Integrin alpha-7", "gene_name": "ITGA7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18564-1", "protein_name": "Integrin beta-6", "gene_name": "ITGB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11215-1", "protein_name": "Integrin alpha-M", "gene_name": "ITGAM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26006-2", "protein_name": "Integrin alpha-3", "gene_name": "ITGA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08514-1", "protein_name": "Integrin alpha-IIb", "gene_name": "ITGA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38570-1", "protein_name": "Integrin alpha-E", "gene_name": "ITGAE", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75578-1", "protein_name": "Integrin alpha-10", "gene_name": "ITGA10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06756-1", "protein_name": "Integrin alpha-V", "gene_name": "ITGAV", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53708-1", "protein_name": "Integrin alpha-8", "gene_name": "ITGA8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13349-1", "protein_name": "Integrin alpha-D", "gene_name": "ITGAD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKX5-1", "protein_name": "Integrin alpha-11", "gene_name": "ITGA11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08648-1", "protein_name": "Integrin alpha-5", "gene_name": "ITGA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13612-1", "protein_name": "Integrin alpha-4", "gene_name": "ITGA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05556-1", "protein_name": "Integrin beta-1", "gene_name": "ITGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02461-1", "protein_name": "Collagen alpha-1(III) chain", "gene_name": "COL3A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07092-1", "protein_name": "Collagen alpha-1(XVI) chain", "gene_name": "COL16A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29400-1", "protein_name": "Collagen alpha-5(IV) chain", "gene_name": "COL4A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14055-1", "protein_name": "Collagen alpha-2(IX) chain", "gene_name": "COL9A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8TX70-1", "protein_name": "Collagen alpha-5(VI) chain", "gene_name": "COL6A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05997-1", "protein_name": "Collagen alpha-2(V) chain", "gene_name": "COL5A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NMZ7-1", "protein_name": "Collagen alpha-6(VI) chain", "gene_name": "COL6A6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12111-1", "protein_name": "Collagen alpha-3(VI) chain", "gene_name": "COL6A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5TAT6-1", "protein_name": "Collagen alpha-1(XIII) chain", "gene_name": "COL13A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08123-1", "protein_name": "Collagen alpha-2(I) chain", "gene_name": "COL1A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12109-1", "protein_name": "Collagen alpha-1(VI) chain", "gene_name": "COL6A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02458-2", "protein_name": "Collagen alpha-1(II) chain", "gene_name": "COL2A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14050-1", "protein_name": "Collagen alpha-3(IX) chain", "gene_name": "COL9A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02675-1", "protein_name": "Fibrinogen beta chain", "gene_name": "FGB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26010-1", "protein_name": "Integrin beta-7", "gene_name": "ITGB7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05106-1", "protein_name": "Integrin beta-3", "gene_name": "ITGB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q03692-1", "protein_name": "Collagen alpha-1(X) chain", "gene_name": "COL10A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12830-1", "protein_name": "Cadherin-1", "gene_name": "CDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04004-1", "protein_name": "Vitronectin", "gene_name": "VTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23229-1", "protein_name": "Integrin alpha-6", "gene_name": "ITGA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14773-1", "protein_name": "Intercellular adhesion molecule 4", "gene_name": "ICAM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13797-1", "protein_name": "Integrin alpha-9", "gene_name": "ITGA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32942-1", "protein_name": "Intercellular adhesion molecule 3", "gene_name": "ICAM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMF0-1", "protein_name": "Intercellular adhesion molecule 5", "gene_name": "ICAM5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20702-1", "protein_name": "Integrin alpha-X", "gene_name": "ITGAX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BX67-1", "protein_name": "Junctional adhesion molecule C", "gene_name": "JAM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17301-1", "protein_name": "Integrin alpha-2", "gene_name": "ITGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57087-1", "protein_name": "Junctional adhesion molecule B", "gene_name": "JAM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26012-1", "protein_name": "Integrin beta-8", "gene_name": "ITGB8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56199-1", "protein_name": "Integrin alpha-1", "gene_name": "ITGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19320-1", "protein_name": "Vascular cell adhesion protein 1", "gene_name": "VCAM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35555-1", "protein_name": "Fibrillin-1", "gene_name": "FBN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13598-1", "protein_name": "Intercellular adhesion molecule 2", "gene_name": "ICAM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24821-1", "protein_name": "Tenascin", "gene_name": "TNC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39060-3", "protein_name": "Collagen alpha-1(XVIII) chain", "gene_name": "COL18A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05107-1", "protein_name": "Integrin beta-2", "gene_name": "ITGB2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9251239", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 84 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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binding site for the proteoglycan decorin on collagen XIV (undulin).", "journal": "The Journal of biological chemistry", "date": "1997", "authors": "Ehnis T, Dieterich W, Bauer M, Kresse H, Schuppan D", "reference": { "type": "PubMed", "id": "9252349", "url": "https://pubmed.ncbi.nlm.nih.gov/9252349" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02452-1", "protein_name": "Collagen alpha-1(I) chain", "gene_name": "COL1A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18084-1", "protein_name": "Integrin beta-5", "gene_name": "ITGB5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00468-1", "protein_name": "Agrin", "gene_name": "AGRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02751-15", "protein_name": "Fibronectin", "gene_name": "FN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21810-1", "protein_name": "Biglycan", "gene_name": "BGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92752-1", "protein_name": "Tenascin-R", "gene_name": "TNR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UQP3-1", "protein_name": "Tenascin-N", "gene_name": "TNN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53420-1", "protein_name": "Collagen alpha-4(IV) chain", "gene_name": "COL4A4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06828-1", "protein_name": "Fibromodulin", "gene_name": "FMOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75096-1", "protein_name": "Low-density lipoprotein receptor-related protein 4", "gene_name": "LRP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10915-1", "protein_name": "Hyaluronan and proteoglycan link protein 1", "gene_name": "HAPLN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16112-1", "protein_name": "Aggrecan core protein", "gene_name": "ACAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21815-1", "protein_name": "Integrin-binding sialoprotein", "gene_name": "IBSP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49747-1", "protein_name": "Cartilage oligomeric matrix protein", "gene_name": "COMP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXN1-1", "protein_name": "Asporin", "gene_name": "ASPN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12110-1", "protein_name": "Collagen alpha-2(VI) chain", "gene_name": "COL6A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14031-1", "protein_name": "Collagen alpha-6(IV) chain", "gene_name": "COL4A6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20908-1", "protein_name": "Collagen alpha-1(V) chain", "gene_name": "COL5A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02462-1", "protein_name": "Collagen alpha-1(IV) chain", "gene_name": "COL4A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08572-1", "protein_name": "Collagen alpha-2(IV) chain", "gene_name": "COL4A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20849-1", "protein_name": "Collagen alpha-1(IX) chain", "gene_name": "COL9A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25940-1", "protein_name": "Collagen alpha-3(V) chain", "gene_name": "COL5A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01955-1", "protein_name": "Collagen alpha-3(IV) chain", "gene_name": "COL4A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14118-1", "protein_name": "Dystroglycan 1", "gene_name": "DAG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07942-1", "protein_name": "Laminin subunit beta-1", "gene_name": "LAMB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24043-1", "protein_name": "Laminin subunit alpha-2", "gene_name": "LAMA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25391-1", "protein_name": "Laminin subunit alpha-1", "gene_name": "LAMA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11047-1", "protein_name": "Laminin subunit gamma-1", "gene_name": "LAMC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10600-1", "protein_name": "Transforming growth factor beta-3 proprotein", "gene_name": "TGFB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13683-1", "protein_name": "Integrin alpha-7", "gene_name": "ITGA7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16787-2", "protein_name": "Laminin subunit alpha-3", "gene_name": "LAMA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18564-1", "protein_name": "Integrin beta-6", "gene_name": "ITGB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16363-1", "protein_name": "Laminin subunit alpha-4", "gene_name": "LAMA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15230-1", "protein_name": "Laminin subunit alpha-5", "gene_name": "LAMA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95460-1", "protein_name": "Matrilin-4", "gene_name": "MATN4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08514-1", "protein_name": "Integrin alpha-IIb", "gene_name": "ITGA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06756-1", "protein_name": "Integrin alpha-V", "gene_name": "ITGAV", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53708-1", "protein_name": "Integrin alpha-8", "gene_name": "ITGA8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21941-1", "protein_name": "Matrilin-1", "gene_name": "MATN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05556-1", "protein_name": "Integrin beta-1", "gene_name": "ITGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02461-1", "protein_name": "Collagen alpha-1(III) chain", "gene_name": "COL3A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29400-1", "protein_name": "Collagen alpha-5(IV) chain", "gene_name": "COL4A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14055-1", "protein_name": "Collagen alpha-2(IX) chain", "gene_name": "COL9A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09486-1", "protein_name": "SPARC", "gene_name": "SPARC", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8TX70-1", "protein_name": "Collagen alpha-5(VI) chain", "gene_name": "COL6A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05997-1", "protein_name": "Collagen alpha-2(V) chain", "gene_name": "COL5A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NMZ7-1", "protein_name": "Collagen alpha-6(VI) chain", "gene_name": "COL6A6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12111-1", "protein_name": "Collagen alpha-3(VI) chain", "gene_name": "COL6A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08123-1", "protein_name": "Collagen alpha-2(I) chain", "gene_name": "COL1A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12109-1", "protein_name": "Collagen alpha-1(VI) chain", "gene_name": "COL6A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02458-2", "protein_name": "Collagen alpha-1(II) chain", "gene_name": "COL2A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14050-1", "protein_name": "Collagen alpha-3(IX) chain", "gene_name": "COL9A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05106-1", "protein_name": "Integrin beta-3", "gene_name": "ITGB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13611-1", "protein_name": "Versican core protein", "gene_name": "VCAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07585-1", "protein_name": "Decorin", "gene_name": "DCN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04004-1", "protein_name": "Vitronectin", "gene_name": "VTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZW4-1", "protein_name": "Dentin sialophosphoprotein", "gene_name": "DSPP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13797-1", "protein_name": "Integrin alpha-9", "gene_name": "ITGA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96GW7-1", "protein_name": "Brevican core protein", "gene_name": "BCAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15146-1", "protein_name": "Muscle, skeletal receptor tyrosine-protein kinase", "gene_name": "MUSK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13332-1", "protein_name": "Receptor-type tyrosine-protein phosphatase S", "gene_name": "PTPRS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20702-1", "protein_name": "Integrin alpha-X", "gene_name": "ITGAX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17301-1", "protein_name": "Integrin alpha-2", "gene_name": "ITGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15232-1", "protein_name": "Matrilin-3", "gene_name": "MATN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22105-3", "protein_name": "Tenascin-X", "gene_name": "TNXB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13591-2", "protein_name": "Neural cell adhesion molecule 1", "gene_name": "NCAM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13316-1", "protein_name": "Dentin matrix acidic phosphoprotein 1", "gene_name": "DMP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55268-1", "protein_name": "Laminin subunit beta-2", "gene_name": "LAMB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24821-1", "protein_name": "Tenascin", "gene_name": "TNC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14594-1", "protein_name": "Neurocan core protein", "gene_name": "NCAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05067-1", "protein_name": "Amyloid-beta precursor protein", "gene_name": "APP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01137-1", "protein_name": "Transforming growth factor beta-1 proprotein", "gene_name": "TGFB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61812-1", "protein_name": "Transforming growth factor beta-2 proprotein", "gene_name": "TGFB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05121-1", "protein_name": "Plasminogen activator inhibitor 1", "gene_name": "SERPINE1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9252349", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 76 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Novel mutations in Sanfilippo A syndrome: implications for enzyme function.", "journal": "Human molecular genetics", "date": "1997", "authors": "Weber B, Guo XH, Wraith JE, Cooper A, Kleijer WJ, Bunge S, Hopwood JJ", "reference": { "type": "PubMed", "id": "9285796", "url": "https://pubmed.ncbi.nlm.nih.gov/9285796" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75056-1", "protein_name": "Syndecan-3", "gene_name": "SDC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54802-1", "protein_name": "Alpha-N-acetylglucosaminidase", "gene_name": "NAGLU", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00468-1", "protein_name": "Agrin", "gene_name": "AGRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51654-1", "protein_name": "Glypican-3", "gene_name": "GPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22304-1", "protein_name": "Iduronate 2-sulfatase", "gene_name": "IDS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35475-1", "protein_name": "Alpha-L-iduronidase", "gene_name": "IDUA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51688-1", "protein_name": "N-sulphoglucosamine sulphohydrolase", "gene_name": "SGSH", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18827-1", "protein_name": "Syndecan-1", "gene_name": "SDC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07711-1", "protein_name": "Procathepsin L", "gene_name": "CTSL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31431-1", "protein_name": "Syndecan-4", "gene_name": "SDC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y625-1", "protein_name": "Glypican-6", "gene_name": "GPC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N158-1", "protein_name": "Glypican-2", "gene_name": "GPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34741-1", "protein_name": "Syndecan-2", "gene_name": "SDC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78333-1", "protein_name": "Glypican-5", "gene_name": "GPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35052-1", "protein_name": "Glypican-1", "gene_name": "GPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWQ2-1", "protein_name": "Inactive heparanase-2", "gene_name": "HPSE2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y251-1", "protein_name": "Heparanase", "gene_name": "HPSE", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75487-1", "protein_name": "Glypican-4", "gene_name": "GPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CP4-1", "protein_name": "Heparan-alpha-glucosaminide N-acetyltransferase", "gene_name": "HGSNAT", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9285796", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 20 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The C-type lectin domains of lecticans, a family of aggregating chondroitin sulfate proteoglycans, bind tenascin-R by protein-protein interactions independent of carbohydrate moiety.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "1997", "authors": "Aspberg A, Miura R, Bourdoulous S, Shimonaka M, Heinegard D, Schachner M, Ruoslahti E, Yamaguchi Y", "reference": { "type": "PubMed", "id": "9294172", "url": "https://pubmed.ncbi.nlm.nih.gov/9294172" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02452-1", "protein_name": "Collagen alpha-1(I) chain", "gene_name": "COL1A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18084-1", "protein_name": "Integrin beta-5", "gene_name": "ITGB5", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"LRP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10915-1", "protein_name": "Hyaluronan and proteoglycan link protein 1", "gene_name": "HAPLN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16112-1", "protein_name": "Aggrecan core protein", "gene_name": "ACAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21815-1", "protein_name": "Integrin-binding sialoprotein", "gene_name": "IBSP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49747-1", "protein_name": "Cartilage oligomeric matrix protein", "gene_name": "COMP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXN1-1", "protein_name": "Asporin", "gene_name": "ASPN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12110-1", "protein_name": "Collagen alpha-2(VI) chain", "gene_name": "COL6A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14031-1", "protein_name": "Collagen alpha-6(IV) chain", "gene_name": "COL4A6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20908-1", "protein_name": "Collagen alpha-1(V) chain", "gene_name": "COL5A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02462-1", "protein_name": "Collagen alpha-1(IV) chain", "gene_name": "COL4A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08572-1", "protein_name": "Collagen alpha-2(IV) chain", "gene_name": "COL4A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20849-1", "protein_name": "Collagen alpha-1(IX) chain", "gene_name": "COL9A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25940-1", "protein_name": "Collagen alpha-3(V) chain", "gene_name": "COL5A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01955-1", "protein_name": "Collagen alpha-3(IV) chain", "gene_name": "COL4A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14118-1", "protein_name": "Dystroglycan 1", "gene_name": "DAG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07942-1", "protein_name": "Laminin subunit beta-1", "gene_name": "LAMB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24043-1", 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neurocan binding site to distinct domains of tenascin-C.", "journal": "The Journal of biological chemistry", "date": "1997", "authors": "Rauch U, Clement A, Retzler C, Frohlich L, Fassler R, Gohring W, Faissner A", "reference": { "type": "PubMed", "id": "9341124", "url": "https://pubmed.ncbi.nlm.nih.gov/9341124" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02452-1", "protein_name": "Collagen alpha-1(I) chain", "gene_name": "COL1A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18084-1", "protein_name": "Integrin beta-5", "gene_name": "ITGB5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00468-1", "protein_name": "Agrin", "gene_name": "AGRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02751-15", "protein_name": "Fibronectin", "gene_name": "FN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21810-1", "protein_name": "Biglycan", "gene_name": "BGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92752-1", "protein_name": "Tenascin-R", "gene_name": "TNR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UQP3-1", "protein_name": "Tenascin-N", "gene_name": "TNN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53420-1", "protein_name": "Collagen alpha-4(IV) chain", "gene_name": "COL4A4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06828-1", "protein_name": "Fibromodulin", "gene_name": "FMOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75096-1", "protein_name": "Low-density lipoprotein receptor-related protein 4", "gene_name": "LRP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10915-1", "protein_name": "Hyaluronan and proteoglycan link protein 1", "gene_name": "HAPLN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16112-1", "protein_name": "Aggrecan core protein", "gene_name": "ACAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21815-1", "protein_name": "Integrin-binding sialoprotein", "gene_name": "IBSP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49747-1", "protein_name": "Cartilage oligomeric matrix protein", "gene_name": "COMP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXN1-1", "protein_name": "Asporin", "gene_name": "ASPN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12110-1", "protein_name": "Collagen alpha-2(VI) chain", "gene_name": "COL6A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14031-1", "protein_name": "Collagen alpha-6(IV) chain", "gene_name": "COL4A6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20908-1", "protein_name": "Collagen alpha-1(V) chain", "gene_name": "COL5A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02462-1", "protein_name": "Collagen alpha-1(IV) chain", "gene_name": "COL4A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08572-1", "protein_name": "Collagen alpha-2(IV) chain", "gene_name": "COL4A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20849-1", "protein_name": "Collagen alpha-1(IX) chain", "gene_name": "COL9A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25940-1", "protein_name": "Collagen alpha-3(V) chain", "gene_name": "COL5A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01955-1", "protein_name": "Collagen alpha-3(IV) chain", "gene_name": "COL4A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14118-1", "protein_name": "Dystroglycan 1", "gene_name": "DAG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07942-1", "protein_name": "Laminin subunit beta-1", "gene_name": "LAMB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24043-1", "protein_name": "Laminin subunit alpha-2", "gene_name": "LAMA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25391-1", "protein_name": "Laminin subunit alpha-1", "gene_name": "LAMA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11047-1", "protein_name": "Laminin subunit gamma-1", "gene_name": "LAMC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10600-1", "protein_name": "Transforming growth factor beta-3 proprotein", "gene_name": "TGFB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13683-1", "protein_name": "Integrin alpha-7", "gene_name": "ITGA7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16787-2", "protein_name": "Laminin subunit alpha-3", "gene_name": "LAMA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18564-1", "protein_name": "Integrin beta-6", "gene_name": "ITGB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16363-1", "protein_name": "Laminin subunit alpha-4", "gene_name": "LAMA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15230-1", "protein_name": "Laminin subunit alpha-5", "gene_name": "LAMA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95460-1", "protein_name": "Matrilin-4", "gene_name": "MATN4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08514-1", "protein_name": "Integrin alpha-IIb", "gene_name": "ITGA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06756-1", "protein_name": "Integrin alpha-V", "gene_name": "ITGAV", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53708-1", "protein_name": "Integrin alpha-8", "gene_name": "ITGA8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21941-1", "protein_name": "Matrilin-1", "gene_name": "MATN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05556-1", "protein_name": "Integrin beta-1", "gene_name": "ITGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02461-1", "protein_name": "Collagen alpha-1(III) chain", "gene_name": "COL3A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29400-1", "protein_name": "Collagen alpha-5(IV) chain", "gene_name": "COL4A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14055-1", "protein_name": "Collagen alpha-2(IX) chain", "gene_name": "COL9A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09486-1", "protein_name": "SPARC", "gene_name": "SPARC", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8TX70-1", "protein_name": "Collagen alpha-5(VI) chain", "gene_name": "COL6A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05997-1", "protein_name": "Collagen alpha-2(V) chain", "gene_name": "COL5A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NMZ7-1", "protein_name": "Collagen alpha-6(VI) chain", "gene_name": "COL6A6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12111-1", "protein_name": "Collagen alpha-3(VI) chain", "gene_name": "COL6A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08123-1", "protein_name": "Collagen alpha-2(I) chain", "gene_name": "COL1A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12109-1", "protein_name": "Collagen alpha-1(VI) chain", "gene_name": "COL6A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02458-2", "protein_name": "Collagen alpha-1(II) chain", "gene_name": "COL2A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14050-1", "protein_name": "Collagen alpha-3(IX) chain", "gene_name": "COL9A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05106-1", "protein_name": "Integrin beta-3", "gene_name": "ITGB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13611-1", "protein_name": "Versican core protein", "gene_name": "VCAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07585-1", "protein_name": "Decorin", "gene_name": "DCN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04004-1", "protein_name": "Vitronectin", "gene_name": "VTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZW4-1", "protein_name": "Dentin sialophosphoprotein", "gene_name": "DSPP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13797-1", "protein_name": "Integrin alpha-9", "gene_name": "ITGA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96GW7-1", "protein_name": "Brevican core protein", "gene_name": "BCAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15146-1", "protein_name": "Muscle, skeletal receptor tyrosine-protein kinase", "gene_name": "MUSK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13332-1", "protein_name": "Receptor-type tyrosine-protein phosphatase S", "gene_name": "PTPRS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20702-1", "protein_name": "Integrin alpha-X", "gene_name": "ITGAX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17301-1", "protein_name": "Integrin alpha-2", "gene_name": "ITGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15232-1", "protein_name": "Matrilin-3", "gene_name": "MATN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22105-3", "protein_name": "Tenascin-X", "gene_name": "TNXB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13591-2", "protein_name": "Neural cell adhesion molecule 1", "gene_name": "NCAM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13316-1", "protein_name": "Dentin matrix acidic phosphoprotein 1", "gene_name": "DMP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55268-1", "protein_name": "Laminin subunit beta-2", "gene_name": "LAMB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24821-1", "protein_name": "Tenascin", "gene_name": "TNC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14594-1", "protein_name": "Neurocan core protein", "gene_name": "NCAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05067-1", "protein_name": "Amyloid-beta precursor protein", "gene_name": "APP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01137-1", "protein_name": "Transforming growth factor beta-1 proprotein", "gene_name": "TGFB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61812-1", "protein_name": "Transforming growth factor beta-2 proprotein", "gene_name": "TGFB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05121-1", "protein_name": "Plasminogen activator inhibitor 1", "gene_name": "SERPINE1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9341124", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 76 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular cloning and expression of mouse and human cDNAs encoding heparan sulfate D-glucosaminyl 3-O-sulfotransferase.", "journal": "The Journal of biological chemistry", "date": "1997", "authors": "Shworak NW, Liu J, Fritze LM, Schwartz JJ, Zhang L, Logeart D, Rosenberg RD", "reference": { "type": "PubMed", "id": "9346953", "url": "https://pubmed.ncbi.nlm.nih.gov/9346953" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75056-1", "protein_name": "Syndecan-3", "gene_name": "SDC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00468-1", "protein_name": "Agrin", "gene_name": "AGRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51654-1", "protein_name": "Glypican-3", "gene_name": "GPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60243-1", "protein_name": "Heparan-sulfate 6-O-sulfotransferase 1", "gene_name": "HS6ST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZT8-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 5", "gene_name": "HS3ST5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y661-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 4", "gene_name": "HS3ST4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y278-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 2", "gene_name": "HS3ST2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O35310-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 1", "gene_name": "Hs3st1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q76EJ3-1", "protein_name": "Nucleotide sugar transporter SLC35D2", "gene_name": "SLC35D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18827-1", "protein_name": "Syndecan-1", "gene_name": "SDC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31431-1", "protein_name": "Syndecan-4", "gene_name": "SDC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y625-1", "protein_name": "Glypican-6", "gene_name": "GPC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52848-1", "protein_name": "Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1", "gene_name": "NDST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95803-1", "protein_name": "Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 3", "gene_name": "NDST3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N158-1", "protein_name": "Glypican-2", "gene_name": "GPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94923-1", "protein_name": "D-glucuronyl C5-epimerase", "gene_name": "GLCE", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43909-1", "protein_name": "Exostosin-like 3", "gene_name": "EXTL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34741-1", "protein_name": "Syndecan-2", "gene_name": "SDC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16394-1", "protein_name": "Exostosin-1", "gene_name": "EXT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78333-1", "protein_name": "Glypican-5", "gene_name": "GPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35052-1", "protein_name": "Glypican-1", "gene_name": "GPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MM7-1", "protein_name": "Heparan-sulfate 6-O-sulfotransferase 2", "gene_name": "HS6ST2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBQ6-1", "protein_name": "Exostosin-like 2", "gene_name": "EXTL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14792-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 1", "gene_name": "HS3ST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y662-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 3B1", "gene_name": "HS3ST3B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52849-1", "protein_name": "Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2", "gene_name": "NDST2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H3R1-1", "protein_name": "N-heparan sulfate sulfotransferase 4", "gene_name": "NDST4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75487-1", "protein_name": "Glypican-4", "gene_name": "GPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93063-1", "protein_name": "Exostosin-2", "gene_name": "EXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LGA3-1", "protein_name": "Heparan sulfate 2-O-sulfotransferase 1", "gene_name": "HS2ST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZP7-1", "protein_name": "Heparan-sulfate 6-O-sulfotransferase 3", "gene_name": "HS6ST3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y663-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 3A1", "gene_name": "HS3ST3A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QI5-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 6", "gene_name": "HS3ST6", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9346953", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 34 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of hyaluronan-binding domains of aggrecan.", "journal": "The Journal of biological chemistry", "date": "1997", "authors": "Watanabe H, Cheung SC, Itano N, Kimata K, Yamada Y", "reference": { "type": "PubMed", "id": "9346959", "url": "https://pubmed.ncbi.nlm.nih.gov/9346959" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02452-1", "protein_name": "Collagen alpha-1(I) chain", "gene_name": "COL1A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18084-1", "protein_name": "Integrin beta-5", "gene_name": "ITGB5", 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "epsilon-Sarcoglycan, a broadly expressed homologue of the gene mutated in limb-girdle muscular dystrophy 2D.", "journal": "The Journal of biological chemistry", "date": "1997", "authors": "Ettinger AJ, Feng G, Sanes JR", "reference": { "type": "PubMed", "id": "9405466", "url": "https://pubmed.ncbi.nlm.nih.gov/9405466" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43556-1", "protein_name": "Epsilon-sarcoglycan", "gene_name": "SGCE", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00468-1", "protein_name": "Agrin", "gene_name": "AGRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16585-1", "protein_name": "Beta-sarcoglycan", 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"uniprot_canonical_ac": "P62736-1", "protein_name": "Actin, aortic smooth muscle", "gene_name": "ACTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11532-1", "protein_name": "Dystrophin", "gene_name": "DMD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13425-1", "protein_name": "Beta-2-syntrophin", "gene_name": "SNTB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13474-1", "protein_name": "Dystrophin-related protein 2", "gene_name": "DRP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55268-1", "protein_name": "Laminin subunit beta-2", "gene_name": "LAMB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60941-1", "protein_name": "Dystrobrevin beta", "gene_name": "DTNB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68133-1", "protein_name": "Actin, alpha skeletal muscle", "gene_name": "ACTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O70258-1", "protein_name": "Epsilon-sarcoglycan", "gene_name": "Sgce", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9405466", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 37 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Interaction of muscle and brain sodium channels with multiple members of the syntrophin family of dystrophin-associated proteins.", "journal": "The Journal of neuroscience : the official journal of the Society for Neuroscience", "date": "1998-01-01", "authors": "Gee S H, Madhavan R, Levinson S R, Caldwell J H, Sealock R, Froehner S C", "reference": { "type": "PubMed", "id": "9412493", "url": "https://pubmed.ncbi.nlm.nih.gov/9412493" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43556-1", "protein_name": "Epsilon-sarcoglycan", "gene_name": "SGCE", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"LAMB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24043-1", "protein_name": "Laminin subunit alpha-2", "gene_name": "LAMA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25391-1", "protein_name": "Laminin subunit alpha-1", "gene_name": "LAMA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6N6-1", "protein_name": "Laminin subunit gamma-3", "gene_name": "LAMC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13753-1", "protein_name": "Laminin subunit gamma-2", "gene_name": "LAMC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11047-1", "protein_name": "Laminin subunit gamma-1", "gene_name": "LAMC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46939-1", "protein_name": "Utrophin", "gene_name": "UTRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY99-1", "protein_name": "Gamma-2-syntrophin", "gene_name": "SNTG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13751-1", "protein_name": "Laminin subunit beta-3", "gene_name": "LAMB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16787-2", "protein_name": "Laminin subunit alpha-3", "gene_name": "LAMA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16363-1", "protein_name": "Laminin subunit alpha-4", "gene_name": "LAMA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15230-1", "protein_name": "Laminin subunit alpha-5", "gene_name": "LAMA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4J8-1", "protein_name": "Dystrobrevin alpha", "gene_name": "DTNA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63267-1", "protein_name": "Actin, gamma-enteric smooth muscle", "gene_name": "ACTG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68032-1", "protein_name": "Actin, alpha cardiac muscle 1", "gene_name": "ACTC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13884-1", "protein_name": "Beta-1-syntrophin", "gene_name": "SNTB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13424-1", "protein_name": "Alpha-1-syntrophin", "gene_name": "SNTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13326-1", "protein_name": "Gamma-sarcoglycan", "gene_name": "SGCG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63261-1", "protein_name": "Actin, cytoplasmic 2", "gene_name": "ACTG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62736-1", "protein_name": "Actin, aortic smooth muscle", "gene_name": "ACTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q61234-1", "protein_name": "Alpha-1-syntrophin", "gene_name": "Snta1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JJV9-1", "protein_name": "Sodium channel protein type 5 subunit alpha", "gene_name": "Scn5a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P11532-1", "protein_name": "Dystrophin", "gene_name": "DMD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13425-1", "protein_name": "Beta-2-syntrophin", "gene_name": "SNTB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ER60-1", "protein_name": "Sodium channel protein type 4 subunit 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"glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9412493", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 41 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The alphavbeta5 integrin functions as an endocytic receptor for vitronectin.", "journal": "Journal of cell science", "date": "1998", "authors": 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"Fibrinogen beta chain", "gene_name": "FGB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26010-1", "protein_name": "Integrin beta-7", "gene_name": "ITGB7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05106-1", "protein_name": "Integrin beta-3", "gene_name": "ITGB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q03692-1", "protein_name": "Collagen alpha-1(X) chain", "gene_name": "COL10A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12830-1", "protein_name": "Cadherin-1", "gene_name": "CDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04004-1", "protein_name": "Vitronectin", "gene_name": "VTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23229-1", "protein_name": "Integrin alpha-6", "gene_name": "ITGA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14773-1", "protein_name": "Intercellular adhesion molecule 4", "gene_name": "ICAM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13797-1", "protein_name": "Integrin alpha-9", "gene_name": "ITGA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32942-1", "protein_name": "Intercellular adhesion molecule 3", "gene_name": "ICAM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMF0-1", "protein_name": "Intercellular adhesion molecule 5", "gene_name": "ICAM5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20702-1", "protein_name": "Integrin alpha-X", "gene_name": "ITGAX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BX67-1", "protein_name": "Junctional adhesion molecule C", "gene_name": "JAM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17301-1", "protein_name": "Integrin alpha-2", "gene_name": "ITGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57087-1", "protein_name": "Junctional adhesion molecule B", "gene_name": "JAM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26012-1", "protein_name": "Integrin beta-8", "gene_name": "ITGB8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56199-1", "protein_name": "Integrin alpha-1", "gene_name": "ITGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19320-1", "protein_name": "Vascular cell adhesion protein 1", "gene_name": "VCAM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35555-1", "protein_name": "Fibrillin-1", "gene_name": "FBN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13598-1", "protein_name": "Intercellular adhesion molecule 2", "gene_name": "ICAM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24821-1", "protein_name": "Tenascin", "gene_name": "TNC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39060-3", "protein_name": "Collagen alpha-1(XVIII) chain", "gene_name": "COL18A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05107-1", "protein_name": "Integrin beta-2", "gene_name": "ITGB2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9443892", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 84 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Effects of melagatran, a new low-molecular-weight thrombin inhibitor, on thrombin and fibrinolytic enzymes.", "journal": "Thrombosis and haemostasis", "date": "1998", "authors": "Gustafsson D, Antonsson T, Bylund R, Eriksson U, Gyzander E, Nilsson I, Elg M, Mattsson C, Deinum J, Pehrsson S, Karlsson O, Nilsson A, Sorensen H", "reference": { "type": "PubMed", "id": "9459334", "url": "https://pubmed.ncbi.nlm.nih.gov/9459334" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75056-1", "protein_name": "Syndecan-3", "gene_name": "SDC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07204-1", "protein_name": "Thrombomodulin", "gene_name": "THBD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00734-1", "protein_name": "Prothrombin", "gene_name": "F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4KMQ2-1", "protein_name": "Anoctamin-6", "gene_name": "ANO6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00468-1", "protein_name": "Agrin", "gene_name": "AGRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q75V66-1", "protein_name": "Anoctamin-5", "gene_name": "ANO5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01008-1", "protein_name": "Antithrombin-III", "gene_name": "SERPINC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07093-1", "protein_name": "Glia-derived nexin", "gene_name": "SERPINE2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNN8-1", "protein_name": "Endothelial protein C receptor", "gene_name": "PROCR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51654-1", "protein_name": "Glypican-3", "gene_name": "GPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07359-1", "protein_name": "Platelet glycoprotein Ib alpha chain", "gene_name": "GP1BA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13224-1", "protein_name": "Platelet glycoprotein Ib beta chain", "gene_name": "GP1BB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24158-1", "protein_name": "Myeloblastin", "gene_name": "PRTN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25116-1", "protein_name": "Proteinase-activated receptor 1", "gene_name": "F2R", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18827-1", "protein_name": "Syndecan-1", "gene_name": "SDC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04275-1", "protein_name": "von Willebrand factor", "gene_name": "VWF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17405-1", "protein_name": "Sphingomyelin phosphodiesterase", "gene_name": "SMPD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76LX8-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 13", "gene_name": "ADAMTS13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6Q3-1", "protein_name": "CD177 antigen", "gene_name": "CD177", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31431-1", "protein_name": "Syndecan-4", "gene_name": "SDC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y625-1", "protein_name": "Glypican-6", "gene_name": "GPC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05154-1", "protein_name": "Plasma serine protease inhibitor", "gene_name": "SERPINA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05155-1", "protein_name": "Plasma protease C1 inhibitor", "gene_name": "SERPING1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N158-1", "protein_name": "Glypican-2", "gene_name": "GPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P03951-1", "protein_name": "Coagulation factor XI", "gene_name": "F11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00740-1", "protein_name": "Coagulation factor IX", "gene_name": "F9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02776-1", "protein_name": "Platelet factor 4", "gene_name": "PF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04070-1", "protein_name": "Vitamin K-dependent protein C", "gene_name": "PROC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34741-1", "protein_name": "Syndecan-2", "gene_name": "SDC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78333-1", "protein_name": "Glypican-5", "gene_name": "GPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35052-1", "protein_name": "Glypican-1", "gene_name": "GPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UK55-1", "protein_name": "Protein Z-dependent protease inhibitor", "gene_name": "SERPINA10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10720-1", "protein_name": "Platelet factor 4 variant", "gene_name": "PF4V1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07225-1", "protein_name": "Vitamin K-dependent protein S", "gene_name": "PROS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05546-1", "protein_name": "Heparin 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"gene_name": "APP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05121-1", "protein_name": "Plasminogen activator inhibitor 1", "gene_name": "SERPINE1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9459334", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 47 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", 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"field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 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"CTSS", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15484-1", "protein_name": "Calpain-5", "gene_name": "CAPN5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60911-1", "protein_name": "Cathepsin L2", "gene_name": "CTSV", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07942-1", "protein_name": "Laminin subunit beta-1", "gene_name": "LAMB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49862-1", "protein_name": "Kallikrein-7", "gene_name": "KLK7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13753-1", "protein_name": "Laminin subunit gamma-2", "gene_name": "LAMC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11047-1", "protein_name": "Laminin subunit gamma-1", "gene_name": "LAMC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45452-1", "protein_name": "Collagenase 3", "gene_name": "MMP13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24347-1", "protein_name": "Stromelysin-3", "gene_name": "MMP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09238-1", "protein_name": "Stromelysin-2", "gene_name": "MMP10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51511-1", "protein_name": "Matrix metalloproteinase-15", "gene_name": "MMP15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96L46-1", "protein_name": "Calpain small subunit 2", "gene_name": "CAPNS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13751-1", "protein_name": "Laminin subunit beta-3", "gene_name": "LAMB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16787-2", "protein_name": "Laminin subunit alpha-3", "gene_name": "LAMA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15230-1", "protein_name": "Laminin subunit alpha-5", "gene_name": "LAMA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09237-1", "protein_name": "Matrilysin", "gene_name": "MMP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6L7-1", "protein_name": "Tolloid-like protein 2", "gene_name": "TLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42574-1", "protein_name": "Caspase-3", "gene_name": "CASP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00747-1", "protein_name": "Plasminogen", "gene_name": "PLG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14780-1", "protein_name": "Matrix metalloproteinase-9", "gene_name": "MMP9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07585-1", "protein_name": "Decorin", "gene_name": "DCN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6W3-1", "protein_name": "Calpain-7", "gene_name": "CAPN7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13497-1", "protein_name": "Bone morphogenetic protein 1", "gene_name": "BMP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NHC0-1", "protein_name": "Calpain-8", "gene_name": "CAPN8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14815-1", "protein_name": "Calpain-9", "gene_name": "CAPN9", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8MX76-1", "protein_name": "Calpain-14", "gene_name": "CAPN14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12830-1", "protein_name": "Cadherin-1", "gene_name": "CDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZSI9-1", "protein_name": "Calpain-12", "gene_name": "CAPN12", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17655-1", "protein_name": "Calpain-2 catalytic subunit", "gene_name": "CAPN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Q1-1", "protein_name": "Calpain-6", "gene_name": "CAPN6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08253-1", "protein_name": "72 kDa type IV collagenase", "gene_name": "MMP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IX30-1", "protein_name": "Signal peptide, CUB and EGF-like domain-containing protein 3", "gene_name": "SCUBE3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96GW7-1", "protein_name": "Brevican core protein", "gene_name": "BCAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE60-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 18", "gene_name": "ADAMTS18", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75173-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 4", "gene_name": "ADAMTS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2N4-3", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 9", "gene_name": "ADAMTS9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHI8-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 1", "gene_name": "ADAMTS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UP79-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 8", "gene_name": "ADAMTS8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20807-1", "protein_name": "Calpain-3", "gene_name": "CAPN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07384-1", "protein_name": "Calpain-1 catalytic subunit", "gene_name": "CAPN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC96-1", "protein_name": "Calpain-10", "gene_name": "CAPN10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43235-1", "protein_name": "Cathepsin K", "gene_name": "CTSK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMQ6-1", "protein_name": "Calpain-11", "gene_name": "CAPN11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35555-1", "protein_name": "Fibrillin-1", "gene_name": "FBN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35556-1", "protein_name": "Fibrillin-2", "gene_name": "FBN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q75N90-1", "protein_name": "Fibrillin-3", "gene_name": "FBN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20810-1", "protein_name": "Calpastatin", "gene_name": "CAST", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08254-1", "protein_name": "Stromelysin-1", "gene_name": "MMP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22894-1", "protein_name": "Neutrophil collagenase", "gene_name": "MMP8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99542-1", "protein_name": "Matrix metalloproteinase-19", "gene_name": "MMP19", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60882-1", "protein_name": "Matrix metalloproteinase-20", "gene_name": "MMP20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IU80-4", "protein_name": "Transmembrane protease serine 6", "gene_name": "TMPRSS6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49768-1", "protein_name": "Presenilin-1", "gene_name": "PSEN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14672-1", "protein_name": "Disintegrin and metalloproteinase domain-containing protein 10", "gene_name": "ADAM10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01023-1", "protein_name": "Alpha-2-macroglobulin", "gene_name": "A2M", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78325-1", "protein_name": "Disintegrin and metalloproteinase domain-containing protein 8", "gene_name": "ADAM8", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9461298", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 81 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mutations in the EXT1 and EXT2 genes in hereditary multiple exostoses.", "journal": "American journal of human genetics", "date": "1998", "authors": "Wuyts W, Van Hul W, De Boulle K, Hendrickx J, Bakker E, Vanhoenacker F, Mollica F, Ludecke HJ, Sayli BS, Pazzaglia UE, Mortier G, Hamel B, Conrad EU, Matsushita M, Raskind WH, Willems PJ", "reference": { "type": "PubMed", "id": "9463333", "url": "https://pubmed.ncbi.nlm.nih.gov/9463333" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75056-1", "protein_name": "Syndecan-3", "gene_name": "SDC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00468-1", "protein_name": "Agrin", "gene_name": "AGRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51654-1", "protein_name": "Glypican-3", "gene_name": "GPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60243-1", "protein_name": "Heparan-sulfate 6-O-sulfotransferase 1", "gene_name": "HS6ST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZT8-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 5", "gene_name": "HS3ST5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y661-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 4", "gene_name": "HS3ST4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y278-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 2", "gene_name": "HS3ST2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76EJ3-1", "protein_name": "Nucleotide sugar transporter SLC35D2", "gene_name": "SLC35D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18827-1", "protein_name": "Syndecan-1", "gene_name": "SDC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31431-1", "protein_name": "Syndecan-4", "gene_name": "SDC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y625-1", "protein_name": "Glypican-6", "gene_name": "GPC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52848-1", "protein_name": "Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1", "gene_name": "NDST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95803-1", "protein_name": "Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 3", "gene_name": "NDST3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N158-1", "protein_name": "Glypican-2", "gene_name": "GPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94923-1", "protein_name": "D-glucuronyl C5-epimerase", "gene_name": "GLCE", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43909-1", "protein_name": "Exostosin-like 3", "gene_name": "EXTL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34741-1", "protein_name": "Syndecan-2", "gene_name": "SDC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16394-1", "protein_name": "Exostosin-1", "gene_name": "EXT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78333-1", "protein_name": "Glypican-5", "gene_name": "GPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35052-1", "protein_name": "Glypican-1", "gene_name": "GPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MM7-1", "protein_name": "Heparan-sulfate 6-O-sulfotransferase 2", "gene_name": "HS6ST2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBQ6-1", "protein_name": "Exostosin-like 2", "gene_name": "EXTL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14792-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 1", "gene_name": "HS3ST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y662-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 3B1", "gene_name": "HS3ST3B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52849-1", "protein_name": "Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2", "gene_name": "NDST2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H3R1-1", "protein_name": "N-heparan sulfate sulfotransferase 4", "gene_name": "NDST4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75487-1", "protein_name": "Glypican-4", "gene_name": "GPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93063-1", "protein_name": "Exostosin-2", "gene_name": "EXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LGA3-1", "protein_name": "Heparan sulfate 2-O-sulfotransferase 1", "gene_name": "HS2ST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZP7-1", "protein_name": "Heparan-sulfate 6-O-sulfotransferase 3", "gene_name": "HS6ST3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y663-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 3A1", "gene_name": "HS3ST3A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QI5-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 6", "gene_name": "HS3ST6", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9463333", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 33 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Novastan (brand of argatroban): a small-molecule, direct thrombin inhibitor.", "journal": "Seminars in thrombosis and hemostasis", "date": "1997", "authors": "Hursting MJ, Alford KL, Becker JC, Brooks RL, Joffrion JL, Knappenberger GD, Kogan PW, Kogan TP, McKinney AA, Schwarz RP Jr", "reference": { "type": "PubMed", "id": "9469622", "url": "https://pubmed.ncbi.nlm.nih.gov/9469622" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75056-1", "protein_name": "Syndecan-3", "gene_name": "SDC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07204-1", "protein_name": "Thrombomodulin", "gene_name": "THBD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00734-1", "protein_name": "Prothrombin", "gene_name": "F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4KMQ2-1", "protein_name": "Anoctamin-6", "gene_name": "ANO6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00468-1", "protein_name": "Agrin", "gene_name": "AGRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q75V66-1", "protein_name": "Anoctamin-5", "gene_name": "ANO5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01008-1", "protein_name": "Antithrombin-III", "gene_name": "SERPINC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07093-1", "protein_name": "Glia-derived nexin", "gene_name": "SERPINE2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNN8-1", "protein_name": "Endothelial protein C receptor", "gene_name": "PROCR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51654-1", "protein_name": "Glypican-3", "gene_name": "GPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07359-1", "protein_name": "Platelet glycoprotein Ib alpha chain", "gene_name": "GP1BA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13224-1", "protein_name": "Platelet glycoprotein Ib beta chain", "gene_name": "GP1BB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24158-1", "protein_name": "Myeloblastin", "gene_name": "PRTN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25116-1", "protein_name": "Proteinase-activated receptor 1", "gene_name": "F2R", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18827-1", "protein_name": "Syndecan-1", "gene_name": "SDC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04275-1", "protein_name": "von Willebrand factor", "gene_name": "VWF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17405-1", "protein_name": "Sphingomyelin phosphodiesterase", "gene_name": "SMPD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76LX8-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 13", "gene_name": "ADAMTS13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6Q3-1", "protein_name": "CD177 antigen", "gene_name": "CD177", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31431-1", "protein_name": "Syndecan-4", "gene_name": "SDC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y625-1", "protein_name": "Glypican-6", "gene_name": "GPC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05154-1", "protein_name": "Plasma serine protease inhibitor", "gene_name": "SERPINA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05155-1", "protein_name": "Plasma protease C1 inhibitor", "gene_name": "SERPING1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N158-1", "protein_name": "Glypican-2", "gene_name": "GPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P03951-1", "protein_name": "Coagulation factor XI", "gene_name": "F11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00740-1", "protein_name": "Coagulation factor IX", "gene_name": "F9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02776-1", "protein_name": "Platelet factor 4", "gene_name": "PF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04070-1", "protein_name": "Vitamin K-dependent protein C", "gene_name": "PROC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34741-1", "protein_name": "Syndecan-2", "gene_name": "SDC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78333-1", "protein_name": "Glypican-5", "gene_name": "GPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35052-1", "protein_name": "Glypican-1", "gene_name": "GPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UK55-1", "protein_name": "Protein Z-dependent protease inhibitor", "gene_name": "SERPINA10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10720-1", "protein_name": "Platelet factor 4 variant", "gene_name": "PF4V1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07225-1", "protein_name": "Vitamin K-dependent protein S", "gene_name": "PROS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05546-1", "protein_name": "Heparin cofactor 2", "gene_name": "SERPIND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22891-1", "protein_name": "Vitamin K-dependent protein Z", "gene_name": "PROZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00742-1", "protein_name": "Coagulation factor X", "gene_name": "F10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75487-1", "protein_name": "Glypican-4", "gene_name": "GPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14770-1", "protein_name": "Platelet glycoprotein IX", "gene_name": "GP9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40197-1", "protein_name": "Platelet glycoprotein V", "gene_name": "GP5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08709-1", "protein_name": "Coagulation factor VII", "gene_name": "F7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13726-1", "protein_name": "Tissue factor", "gene_name": "F3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05067-1", "protein_name": "Amyloid-beta precursor protein", "gene_name": "APP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05121-1", "protein_name": "Plasminogen activator inhibitor 1", "gene_name": "SERPINE1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9469622", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 47 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular cloning and expression of glucuronyltransferase I involved in the biosynthesis of the glycosaminoglycan-protein linkage region of proteoglycans.", "journal": "The Journal of biological chemistry", "date": "1998", "authors": "Kitagawa H, Tone Y, Tamura J, Neumann KW, Ogawa T, Oka S, Kawasaki T, Sugahara K", "reference": { "type": "PubMed", "id": "9506957", "url": "https://pubmed.ncbi.nlm.nih.gov/9506957" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75056-1", "protein_name": "Syndecan-3", "gene_name": "SDC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00468-1", "protein_name": "Agrin", "gene_name": "AGRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75063-1", "protein_name": "Glycosaminoglycan xylosylkinase", "gene_name": "FAM20B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21810-1", "protein_name": "Biglycan", "gene_name": "BGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51654-1", "protein_name": "Glypican-3", "gene_name": "GPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18827-1", "protein_name": "Syndecan-1", "gene_name": "SDC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2W7-1", "protein_name": "Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1", "gene_name": "B3GAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94766-1", "protein_name": "Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3", "gene_name": "B3GAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPZ5-1", "protein_name": "Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2", "gene_name": "B3GAT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95196-1", "protein_name": "Chondroitin sulfate proteoglycan 5", "gene_name": "CSPG5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31431-1", "protein_name": "Syndecan-4", "gene_name": "SDC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y625-1", "protein_name": "Glypican-6", "gene_name": "GPC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N158-1", "protein_name": "Glypican-2", "gene_name": "GPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34741-1", "protein_name": "Syndecan-2", "gene_name": "SDC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UVK1-1", "protein_name": "Chondroitin sulfate proteoglycan 4", "gene_name": "CSPG4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78333-1", "protein_name": "Glypican-5", "gene_name": "GPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35052-1", "protein_name": "Glypican-1", "gene_name": "GPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13611-1", "protein_name": "Versican core protein", "gene_name": "VCAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96L58-1", "protein_name": "Beta-1,3-galactosyltransferase 6", "gene_name": "B3GALT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07585-1", "protein_name": "Decorin", "gene_name": "DCN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBV7-1", "protein_name": "Beta-1,4-galactosyltransferase 7", "gene_name": "B4GALT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96GW7-1", "protein_name": "Brevican core protein", "gene_name": "BCAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE99-1", "protein_name": "2-phosphoxylose phosphatase 1", "gene_name": "PXYLP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H1B5-1", "protein_name": "Xylosyltransferase 2", "gene_name": "XYLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NBZ7-1", "protein_name": "UDP-glucuronic acid decarboxylase 1", "gene_name": "UXS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86Y38-1", "protein_name": "Xylosyltransferase 1", "gene_name": "XYLT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75487-1", "protein_name": "Glypican-4", "gene_name": "GPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14594-1", "protein_name": "Neurocan core protein", "gene_name": "NCAN", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9506957", "abstract": "", "glycosylation": [], "mutagenesis": 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular characterization and expression of heparan-sulfate 6-sulfotransferase. Complete cDNA cloning in human and partial cloning in Chinese hamster ovary cells.", "journal": "The Journal of biological chemistry", "date": "1998", "authors": "Habuchi H, Kobayashi M, Kimata K", "reference": { "type": "PubMed", "id": "9535912", "url": "https://pubmed.ncbi.nlm.nih.gov/9535912" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75056-1", "protein_name": "Syndecan-3", "gene_name": "SDC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00468-1", "protein_name": "Agrin", "gene_name": "AGRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51654-1", "protein_name": "Glypican-3", "gene_name": "GPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60243-1", "protein_name": "Heparan-sulfate 6-O-sulfotransferase 1", "gene_name": "HS6ST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q91ZB4-1", "protein_name": "Heparan-sulfate 6-O-sulfotransferase 1", "gene_name": "HS6ST1", "tax_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q8IZT8-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 5", "gene_name": "HS3ST5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y661-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 4", "gene_name": "HS3ST4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y278-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 2", "gene_name": "HS3ST2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76EJ3-1", "protein_name": "Nucleotide sugar transporter SLC35D2", "gene_name": "SLC35D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18827-1", "protein_name": "Syndecan-1", "gene_name": "SDC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31431-1", "protein_name": "Syndecan-4", "gene_name": "SDC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y625-1", "protein_name": "Glypican-6", "gene_name": "GPC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52848-1", "protein_name": "Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1", "gene_name": "NDST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95803-1", "protein_name": "Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 3", "gene_name": "NDST3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N158-1", "protein_name": "Glypican-2", "gene_name": "GPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94923-1", "protein_name": "D-glucuronyl C5-epimerase", "gene_name": "GLCE", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43909-1", "protein_name": "Exostosin-like 3", "gene_name": "EXTL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P34741-1", "protein_name": "Syndecan-2", "gene_name": "SDC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16394-1", "protein_name": "Exostosin-1", "gene_name": "EXT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78333-1", "protein_name": "Glypican-5", "gene_name": "GPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35052-1", "protein_name": "Glypican-1", "gene_name": "GPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MM7-1", "protein_name": "Heparan-sulfate 6-O-sulfotransferase 2", "gene_name": "HS6ST2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBQ6-1", "protein_name": "Exostosin-like 2", "gene_name": "EXTL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14792-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 1", "gene_name": "HS3ST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y662-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 3B1", "gene_name": "HS3ST3B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52849-1", "protein_name": "Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2", "gene_name": "NDST2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H3R1-1", "protein_name": "N-heparan sulfate sulfotransferase 4", "gene_name": "NDST4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75487-1", "protein_name": "Glypican-4", "gene_name": "GPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93063-1", "protein_name": "Exostosin-2", "gene_name": "EXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LGA3-1", "protein_name": "Heparan sulfate 2-O-sulfotransferase 1", "gene_name": "HS2ST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZP7-1", "protein_name": "Heparan-sulfate 6-O-sulfotransferase 3", "gene_name": "HS6ST3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y663-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 3A1", "gene_name": "HS3ST3A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QI5-1", "protein_name": "Heparan sulfate glucosamine 3-O-sulfotransferase 6", "gene_name": "HS3ST6", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9535912", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 34 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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[] } ] }, { "title": "Identification of the ligand binding site for the integrin alpha9 beta1 in the third fibronectin type III repeat of tenascin-C.", "journal": "The Journal of biological chemistry", "date": "1998", "authors": "Yokosaki Y, Matsuura N, Higashiyama S, Murakami I, Obara M, Yamakido M, Shigeto N, Chen J, Sheppard D", "reference": { "type": "PubMed", "id": "9565552", "url": "https://pubmed.ncbi.nlm.nih.gov/9565552" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02452-1", "protein_name": "Collagen alpha-1(I) chain", "gene_name": "COL1A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18084-1", "protein_name": "Integrin beta-5", "gene_name": "ITGB5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02671-1", "protein_name": "Fibrinogen alpha chain", "gene_name": "FGA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00468-1", "protein_name": "Agrin", "gene_name": "AGRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02751-15", "protein_name": "Fibronectin", "gene_name": "FN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08722-1", "protein_name": "Leukocyte surface antigen CD47", "gene_name": "CD47", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53420-1", "protein_name": "Collagen alpha-4(IV) chain", "gene_name": "COL4A4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02679-1", "protein_name": "Fibrinogen gamma chain", "gene_name": "FGG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86Y22-1", "protein_name": "Collagen alpha-1(XXIII) chain", "gene_name": "COL23A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20701-1", "protein_name": "Integrin alpha-L", "gene_name": "ITGAL", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05362-1", "protein_name": "Intercellular adhesion molecule 1", "gene_name": "ICAM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y624-1", "protein_name": "Junctional adhesion molecule A", "gene_name": "F11R", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35613-1", "protein_name": "Basigin", "gene_name": "BSG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21815-1", "protein_name": "Integrin-binding sialoprotein", "gene_name": "IBSP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49747-1", "protein_name": "Cartilage oligomeric matrix protein", "gene_name": "COMP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04275-1", "protein_name": "von Willebrand factor", "gene_name": "VWF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07996-1", "protein_name": "Thrombospondin-1", "gene_name": "THBS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16070-1", "protein_name": "CD44 antigen", "gene_name": "CD44", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10451-1", "protein_name": "Osteopontin", "gene_name": "SPP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12110-1", "protein_name": "Collagen alpha-2(VI) chain", "gene_name": "COL6A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14031-1", "protein_name": "Collagen alpha-6(IV) chain", "gene_name": "COL4A6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20908-1", "protein_name": "Collagen alpha-1(V) chain", "gene_name": "COL5A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02462-1", "protein_name": "Collagen alpha-1(IV) chain", "gene_name": "COL4A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27658-1", "protein_name": "Collagen alpha-1(VIII) chain", "gene_name": "COL8A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08572-1", "protein_name": "Collagen alpha-2(IV) chain", "gene_name": "COL4A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25067-1", "protein_name": "Collagen alpha-2(VIII) chain", "gene_name": 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"protein_name": "Integrin alpha-M", "gene_name": "ITGAM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26006-2", "protein_name": "Integrin alpha-3", "gene_name": "ITGA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08514-1", "protein_name": "Integrin alpha-IIb", "gene_name": "ITGA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38570-1", "protein_name": "Integrin alpha-E", "gene_name": "ITGAE", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75578-1", "protein_name": "Integrin alpha-10", "gene_name": "ITGA10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06756-1", "protein_name": "Integrin alpha-V", "gene_name": "ITGAV", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53708-1", "protein_name": "Integrin alpha-8", "gene_name": "ITGA8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13349-1", "protein_name": "Integrin alpha-D", "gene_name": "ITGAD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKX5-1", "protein_name": "Integrin alpha-11", 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"Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14050-1", "protein_name": "Collagen alpha-3(IX) chain", "gene_name": "COL9A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02675-1", "protein_name": "Fibrinogen beta chain", "gene_name": "FGB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26010-1", "protein_name": "Integrin beta-7", "gene_name": "ITGB7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05106-1", "protein_name": "Integrin beta-3", "gene_name": "ITGB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q03692-1", "protein_name": "Collagen alpha-1(X) chain", "gene_name": "COL10A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12830-1", "protein_name": "Cadherin-1", "gene_name": "CDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04004-1", "protein_name": "Vitronectin", "gene_name": "VTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23229-1", "protein_name": 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Their adhesion to laminin-5 involves multiple receptors among which is integrin alpha2beta1.", "journal": "Journal of cell science", "date": "1998", "authors": "Orian-Rousseau V, Aberdam D, Rousselle P, Messent A, Gavrilovic J, Meneguzzi G, Kedinger M, Simon-Assmann P", "reference": { "type": "PubMed", "id": "9645947", "url": "https://pubmed.ncbi.nlm.nih.gov/9645947" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16144-1", "protein_name": "Integrin beta-4", "gene_name": "ITGB4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53420-1", "protein_name": "Collagen alpha-4(IV) chain", "gene_name": "COL4A4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14543-1", "protein_name": "Nidogen-1", "gene_name": "NID1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14112-1", 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"protein_name": "Laminin subunit beta-2", "gene_name": "LAMB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39060-3", "protein_name": "Collagen alpha-1(XVIII) chain", "gene_name": "COL18A1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9645947", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 30 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", 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"uniprot_canonical_ac": "O00468-1", "protein_name": "Agrin", "gene_name": "AGRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16585-1", "protein_name": "Beta-sarcoglycan", "gene_name": "SGCB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14714-1", "protein_name": "Sarcospan", "gene_name": "SSPN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16586-1", "protein_name": "Alpha-sarcoglycan", "gene_name": "SGCA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LD1-1", "protein_name": "Zeta-sarcoglycan", "gene_name": "SGCZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92629-1", "protein_name": "Delta-sarcoglycan", "gene_name": "SGCD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14118-1", "protein_name": "Dystroglycan 1", "gene_name": "DAG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07942-1", "protein_name": "Laminin subunit beta-1", "gene_name": "LAMB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24043-1", "protein_name": "Laminin 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"LAMB2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9659900", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 40 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cartilage oligomeric matrix protein shows high affinity zinc-dependent interaction with triple helical collagen.", "journal": "The Journal of biological chemistry", "date": "1998", "authors": "Rosenberg K, Olsson H, Morgelin M, Heinegard D", "reference": { "type": "PubMed", "id": "9685393", "url": "https://pubmed.ncbi.nlm.nih.gov/9685393" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P98160-1", "protein_name": "Basement membrane-specific heparan sulfate proteoglycan core protein", "gene_name": "HSPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51884-1", "protein_name": "Lumican", "gene_name": "LUM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02452-1", "protein_name": "Collagen alpha-1(I) chain", "gene_name": "COL1A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18084-1", "protein_name": "Integrin beta-5", "gene_name": "ITGB5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00468-1", "protein_name": "Agrin", "gene_name": "AGRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02751-15", "protein_name": "Fibronectin", "gene_name": "FN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21810-1", "protein_name": "Biglycan", "gene_name": "BGN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92752-1", "protein_name": "Tenascin-R", "gene_name": "TNR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UQP3-1", "protein_name": "Tenascin-N", "gene_name": "TNN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53420-1", "protein_name": "Collagen alpha-4(IV) chain", "gene_name": "COL4A4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06828-1", "protein_name": "Fibromodulin", "gene_name": "FMOD", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75096-1", "protein_name": "Low-density lipoprotein receptor-related protein 4", "gene_name": "LRP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10915-1", "protein_name": "Hyaluronan and proteoglycan link protein 1", "gene_name": "HAPLN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16112-1", "protein_name": "Aggrecan core protein", "gene_name": "ACAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21815-1", "protein_name": "Integrin-binding sialoprotein", "gene_name": "IBSP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49747-1", "protein_name": "Cartilage oligomeric matrix protein", "gene_name": "COMP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXN1-1", "protein_name": "Asporin", "gene_name": "ASPN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12110-1", "protein_name": "Collagen alpha-2(VI) chain", "gene_name": "COL6A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14031-1", "protein_name": "Collagen alpha-6(IV) chain", "gene_name": "COL4A6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20908-1", "protein_name": "Collagen alpha-1(V) chain", "gene_name": "COL5A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02462-1", "protein_name": "Collagen alpha-1(IV) chain", "gene_name": "COL4A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08572-1", "protein_name": "Collagen alpha-2(IV) chain", "gene_name": "COL4A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20849-1", "protein_name": "Collagen alpha-1(IX) chain", "gene_name": "COL9A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25940-1", "protein_name": "Collagen alpha-3(V) chain", "gene_name": "COL5A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01955-1", "protein_name": "Collagen alpha-3(IV) chain", "gene_name": "COL4A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14118-1", "protein_name": "Dystroglycan 1", "gene_name": "DAG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07942-1", "protein_name": "Laminin subunit beta-1", "gene_name": "LAMB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24043-1", "protein_name": "Laminin subunit alpha-2", "gene_name": "LAMA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25391-1", "protein_name": "Laminin subunit alpha-1", "gene_name": "LAMA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11047-1", "protein_name": "Laminin subunit gamma-1", "gene_name": "LAMC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10600-1", "protein_name": "Transforming growth factor beta-3 proprotein", "gene_name": "TGFB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13683-1", "protein_name": "Integrin alpha-7", "gene_name": "ITGA7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16787-2", "protein_name": "Laminin subunit alpha-3", "gene_name": "LAMA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18564-1", "protein_name": "Integrin beta-6", "gene_name": "ITGB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16363-1", "protein_name": "Laminin subunit alpha-4", "gene_name": "LAMA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15230-1", "protein_name": "Laminin subunit alpha-5", "gene_name": "LAMA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95460-1", "protein_name": "Matrilin-4", "gene_name": "MATN4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08514-1", "protein_name": "Integrin alpha-IIb", "gene_name": "ITGA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06756-1", "protein_name": "Integrin alpha-V", "gene_name": "ITGAV", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53708-1", "protein_name": "Integrin alpha-8", "gene_name": "ITGA8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21941-1", "protein_name": "Matrilin-1", "gene_name": "MATN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05556-1", "protein_name": "Integrin beta-1", "gene_name": "ITGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02461-1", "protein_name": "Collagen alpha-1(III) chain", "gene_name": "COL3A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29400-1", "protein_name": "Collagen alpha-5(IV) chain", "gene_name": "COL4A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14055-1", "protein_name": "Collagen alpha-2(IX) chain", "gene_name": "COL9A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09486-1", "protein_name": "SPARC", "gene_name": "SPARC", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8TX70-1", "protein_name": "Collagen alpha-5(VI) chain", "gene_name": "COL6A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05997-1", "protein_name": "Collagen alpha-2(V) chain", "gene_name": "COL5A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NMZ7-1", "protein_name": "Collagen alpha-6(VI) chain", "gene_name": "COL6A6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12111-1", "protein_name": "Collagen alpha-3(VI) chain", "gene_name": "COL6A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08123-1", "protein_name": "Collagen alpha-2(I) chain", "gene_name": "COL1A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12109-1", "protein_name": "Collagen alpha-1(VI) chain", "gene_name": "COL6A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02458-2", "protein_name": "Collagen alpha-1(II) chain", "gene_name": "COL2A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14050-1", "protein_name": "Collagen alpha-3(IX) chain", "gene_name": "COL9A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05106-1", "protein_name": "Integrin beta-3", "gene_name": "ITGB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13611-1", "protein_name": "Versican core protein", "gene_name": "VCAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07585-1", "protein_name": "Decorin", "gene_name": "DCN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04004-1", "protein_name": "Vitronectin", "gene_name": "VTN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZW4-1", "protein_name": "Dentin sialophosphoprotein", "gene_name": "DSPP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13797-1", "protein_name": "Integrin alpha-9", "gene_name": "ITGA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96GW7-1", "protein_name": "Brevican core protein", "gene_name": "BCAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15146-1", "protein_name": "Muscle, skeletal receptor tyrosine-protein kinase", "gene_name": "MUSK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13332-1", "protein_name": "Receptor-type tyrosine-protein phosphatase S", "gene_name": "PTPRS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20702-1", "protein_name": "Integrin alpha-X", "gene_name": "ITGAX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17301-1", "protein_name": "Integrin alpha-2", "gene_name": "ITGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15232-1", "protein_name": "Matrilin-3", "gene_name": "MATN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22105-3", "protein_name": "Tenascin-X", "gene_name": "TNXB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13591-2", "protein_name": "Neural cell adhesion molecule 1", "gene_name": "NCAM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13316-1", "protein_name": "Dentin matrix acidic phosphoprotein 1", "gene_name": "DMP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55268-1", "protein_name": "Laminin subunit beta-2", "gene_name": "LAMB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24821-1", "protein_name": "Tenascin", "gene_name": "TNC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14594-1", "protein_name": "Neurocan core protein", "gene_name": "NCAN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05067-1", "protein_name": "Amyloid-beta precursor protein", "gene_name": "APP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01137-1", "protein_name": "Transforming growth factor beta-1 proprotein", "gene_name": "TGFB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61812-1", "protein_name": "Transforming growth factor beta-2 proprotein", "gene_name": "TGFB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05121-1", "protein_name": "Plasminogen activator inhibitor 1", "gene_name": "SERPINE1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P98160", "url": "https://www.uniprot.org/uniprotkb/P98160" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9685393", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 76 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] } ]