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to chronically elevated glucose contributes to glucotoxicity-associated \u03b2 cell dysfunction.", "journal": "Islets", "date": "2024-12-31", "authors": "Grieve LilyAnne M, Rani Abhya, ZeRuth Gary T", "reference": { "type": "PubMed", "id": "38652652", "url": "https://pubmed.ncbi.nlm.nih.gov/38652652" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0ABK0LU03-1", "protein_name": "GLIS family zinc finger 3", "gene_name": "Glis3", "tax_name": "Rat" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "A0ABK0LU03", "url": "https://www.uniprot.org/uniprotkb/A0ABK0LU03" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.38652652", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", 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a receptor for C5a anaphylatoxin on differentiated HL-60 cells.", "journal": "Biochemistry", "date": "1991-03-26", "authors": "Boulay F, Mery L, Tardif M, Brouchon L, Vignais P", "reference": { "type": "PubMed", "id": "2007135", "url": "https://pubmed.ncbi.nlm.nih.gov/2007135" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A8V1AM71-1", "protein_name": "Complement C5", "gene_name": "C5", "tax_name": "Chicken" }, { "uniprot_canonical_ac": "P21730-1", "protein_name": "C5a anaphylatoxin chemotactic receptor 1", "gene_name": "C5AR1", "tax_name": "Human" } ], "species": [ { "name": "Gallus gallus", "taxid": 9031, "evidence": [ { "database": "UniProtKB", "id": "A0A8V1AM71", "url": "https://www.uniprot.org/uniprotkb/A0A8V1AM71" } ], "common_name": "Chicken", "glygen_name": "Chicken", "reference_species": "Gallus gallus [9031]" } ], "record_id": "pubmed.2007135", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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"n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Complement: a key system for immune surveillance and homeostasis.", "journal": "Nature immunology", "date": "2010", "authors": "Ricklin D, Hajishengallis G, Yang K, Lambris JD", "reference": { "type": "PubMed", "id": "20720586", "url": "https://pubmed.ncbi.nlm.nih.gov/20720586" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A8V1AM71-1", "protein_name": "Complement C5", "gene_name": "C5", "tax_name": "Chicken" } ], "species": [ { "name": "Gallus gallus", "taxid": 9031, "evidence": [ { "database": "UniProtKB", "id": "A0A8V1AM71", "url": "https://www.uniprot.org/uniprotkb/A0A8V1AM71" } ], "common_name": "Chicken", "glygen_name": "Chicken", "reference_species": "Gallus gallus [9031]" } ], "record_id": "pubmed.20720586", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 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[] } ] }, { "title": "Functional requirements for inhibitory signal transmission by the immunomodulatory receptor CD300a.", "journal": "BMC immunology", "date": "2012-04-26", "authors": "DeBell Karen E, Simhadri Venkateswara R, Mariano John L, Borrego Francisco", "reference": { "type": "PubMed", "id": "22537350", "url": "https://pubmed.ncbi.nlm.nih.gov/22537350" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A8V1APN5-1", "protein_name": "CD300 molecule like family member g", "gene_name": "CD300LG", "tax_name": "Chicken" } ], "species": [ { "name": "Gallus gallus", "taxid": 9031, "evidence": [ { "database": "UniProtKB", "id": "A0A8V1APN5", "url": "https://www.uniprot.org/uniprotkb/A0A8V1APN5" } ], "common_name": "Chicken", "glygen_name": "Chicken", "reference_species": "Gallus gallus [9031]" } ], "record_id": "pubmed.22537350", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ 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S, Elnitski L, Idol JR, Prasad AB, Lee-Lin SQ, Maduro VV, Summers TJ, Portnoy ME, Dietrich NL, Akhter N, Ayele K, Benjamin B, Cariaga K, Brinkley CP, Brooks SY, Granite S, Guan X, Gupta J, Haghighi P, Ho SL, Huang MC, Karlins E, Laric PL, Legaspi R, Lim MJ, Maduro QL, Masiello CA, Mastrian SD, McCloskey JC, Pearson R, Stantripop S, Tiongson EE, Tran JT, Tsurgeon C, Vogt JL, Walker MA, Wetherby KD, Wiggins LS, Young AC, Zhang LH, Osoegawa K, Zhu B, Zhao B, Shu CL, De Jong PJ, Lawrence CE, Smit AF, Chakravarti A, Haussler D, Green P, Miller W, Green ED", "reference": { "type": "PubMed", "id": "12917688", "url": "https://pubmed.ncbi.nlm.nih.gov/12917688" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0M8U1-1", "protein_name": "Suppressor of tumorigenicity 7 protein homolog", "gene_name": "ST7", "tax_name": "Chicken" }, { "uniprot_canonical_ac": "P79132-1", "protein_name": "Caveolin-1", "gene_name": "CAV1", "tax_name": "Bovine" }, { 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"protein_name": "Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1", "gene_name": "ASZ1", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "Q29221-1", "protein_name": "F-actin-capping protein subunit alpha-2", "gene_name": "CAPZA2", "tax_name": "Pig" }, { "uniprot_canonical_ac": "Q2QLD7-1", "protein_name": "Suppressor of tumorigenicity 7 protein", "gene_name": "ST7", "tax_name": "Pig" }, { "uniprot_canonical_ac": "Q2QLE3-1", "protein_name": "Testin", "gene_name": "TES", "tax_name": "Pig" }, { "uniprot_canonical_ac": "Q90YH9-1", "protein_name": "Testin", "gene_name": "TES", "tax_name": "Chicken" }, { "uniprot_canonical_ac": "Q5E997-1", "protein_name": "F-actin-capping protein subunit alpha-2", "gene_name": "CAPZA2", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "Q2YDE9-1", "protein_name": "Testin", "gene_name": "TES", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "Q2LAP6-1", "protein_name": "Testin", "gene_name": "Tes", "tax_name": "Rat" } ], "species": [ { "name": "Gallus gallus", "taxid": 9031, "evidence": [ { "database": "UniProtKB", "id": "A0M8U1", "url": "https://www.uniprot.org/uniprotkb/A0M8U1" } ], "common_name": "Chicken", "glygen_name": "Chicken", "reference_species": "Gallus gallus [9031]" } ], "record_id": "pubmed.12917688", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 25 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterisation of a cluster of TRIM-B30.2 genes in the chicken MHC B locus.", "journal": "Immunogenetics", "date": "2005-04", "authors": "Ruby Thomas, Bed'Hom Bertrand, Wittzell Hakan, Morin V\u00e9ronique, Oudin Anne, Zoorob Rima", "reference": { "type": "PubMed", "id": "15744538", "url": "https://pubmed.ncbi.nlm.nih.gov/15744538" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A5HUK4-1", "protein_name": "Tripartite motif containing 27.1, MHCB region", "gene_name": "TRIM27.1", "tax_name": "Chicken" }, { "uniprot_canonical_ac": "P63247-1", "protein_name": "Small ribosomal subunit protein RACK1", "gene_name": "RACK1", "tax_name": "Chicken" } ], "species": [ { "name": "Gallus gallus", "taxid": 9031, "evidence": [ { "database": "UniProtKB", "id": "A5HUK4", "url": "https://www.uniprot.org/uniprotkb/A5HUK4" } ], "common_name": "Chicken", "glygen_name": "Chicken", "reference_species": "Gallus gallus [9031]" } ], "record_id": "pubmed.15744538", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "RAM/Fam103a1 is required for mRNA cap methylation.", "journal": "Molecular cell", "date": "2011", "authors": "Gonatopoulos-Pournatzis T, Dunn S, Bounds R, Cowling VH", "reference": { "type": "PubMed", "id": "22099306", "url": "https://pubmed.ncbi.nlm.nih.gov/22099306" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "E1C6C2-1", "protein_name": "Family with sequence similarity 103 member A1", "gene_name": "FAM103A1", "tax_name": "Chicken" }, { "uniprot_canonical_ac": "Q9BTL3-1", "protein_name": "RNA guanine-N7 methyltransferase activating subunit", "gene_name": "RAMAC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43148-1", "protein_name": "mRNA cap guanine-N(7) methyltransferase", "gene_name": "RNMT", "tax_name": "Human" } ], "species": [ { "name": "Gallus gallus", "taxid": 9031, "evidence": [ { "database": "UniProtKB", "id": "E1C6C2", "url": "https://www.uniprot.org/uniprotkb/E1C6C2" } ], "common_name": "Chicken", "glygen_name": "Chicken", "reference_species": "Gallus gallus [9031]" } ], "record_id": "pubmed.22099306", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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"field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Effect of the melatonin nuclear receptor ROR\u03b1 on monochromatic light-induced T-lymphocyte proliferation in chicken thymus.", "journal": "Immunology letters", "date": "2019-09", "authors": "Xiong Juanjuan, Wang Zixu, Cao Jing, Dong Yulan, Chen Yaoxing", "reference": { "type": "PubMed", "id": "31326445", "url": "https://pubmed.ncbi.nlm.nih.gov/31326445" }, 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"count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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"https://www.uniprot.org/uniprotkb/F1NDA6" } ], "common_name": "Chicken", "glygen_name": "Chicken", "reference_species": "Gallus gallus [9031]" } ], "record_id": "pubmed.12899849", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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gene expression in broiler chickens.", "journal": "British poultry science", "date": "2005-08", "authors": "Kono T, Nishida M, Nishiki Y, Seki Y, Sato K, Akiba Y", "reference": { "type": "PubMed", "id": "16268111", "url": "https://pubmed.ncbi.nlm.nih.gov/16268111" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "F1NDA6-1", "protein_name": "Solute carrier family 2, facilitated glucose transporter member 8", "gene_name": "SLC2A8", "tax_name": "Chicken" }, { "uniprot_canonical_ac": "P28568-1", "protein_name": "Solute carrier family 2, facilitated glucose transporter member 3", "gene_name": "SLC2A3", "tax_name": "Chicken" } ], "species": [ { "name": "Gallus gallus", "taxid": 9031, "evidence": [ { "database": "UniProtKB", "id": "F1NDA6", "url": "https://www.uniprot.org/uniprotkb/F1NDA6" } ], "common_name": "Chicken", "glygen_name": "Chicken", "reference_species": "Gallus gallus [9031]" } ], "record_id": "pubmed.16268111", "abstract": "", "glycosylation": [], 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"Identification of 26RFa, a hypothalamic neuropeptide of the RFamide peptide family with orexigenic activity.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "2003", "authors": "Chartrel N, Dujardin C, Anouar Y, Leprince J, Decker A, Clerens S, Do-Rego JC, Vandesande F, Llorens-Cortes C, Costentin J, Beauvillain JC, Vaudry H", "reference": { "type": "PubMed", "id": "14657341", "url": "https://pubmed.ncbi.nlm.nih.gov/14657341" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P83860-1", "protein_name": "Orexigenic neuropeptide QRFP", "gene_name": "Qrfp", "tax_name": "Rat" }, { "uniprot_canonical_ac": "P83859-1", "protein_name": "Orexigenic neuropeptide QRFP", "gene_name": "QRFP", "tax_name": "Human" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "P83860", "url": "https://www.uniprot.org/uniprotkb/P83860" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.14657341", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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Biol. Cell", "date": "2005", "authors": "Nakamura N, Fukuda H, Kato A, Hirose S", "reference": { "type": "PubMed", "id": "15689499", "url": "https://pubmed.ncbi.nlm.nih.gov/15689499" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q63635-1", "protein_name": "Syntaxin-6", "gene_name": "Stx6", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q5I0I2-1", "protein_name": "E3 ubiquitin-protein ligase MARCHF2", "gene_name": "Marchf2", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q9P0N8-1", "protein_name": "E3 ubiquitin-protein ligase MARCHF2", "gene_name": "MARCHF2", "tax_name": "Human" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "Q63635", "url": "https://www.uniprot.org/uniprotkb/Q63635" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.15689499", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "MARCH-III is a novel component of endosomes with properties similar to those of MARCH-II.", "journal": "J. Biochem.", "date": "2006", "authors": "Fukuda H, Nakamura N, Hirose S", "reference": { "type": "PubMed", "id": "16428329", "url": "https://pubmed.ncbi.nlm.nih.gov/16428329" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q63635-1", "protein_name": "Syntaxin-6", "gene_name": "Stx6", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q5I0I2-1", "protein_name": "E3 ubiquitin-protein ligase MARCHF2", "gene_name": "Marchf2", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q5XIE5-1", "protein_name": "E3 ubiquitin-protein ligase MARCHF3", "gene_name": "Marchf3", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q9P0N8-1", "protein_name": "E3 ubiquitin-protein ligase MARCHF2", "gene_name": "MARCHF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86UD3-1", "protein_name": "E3 ubiquitin-protein ligase MARCHF3", "gene_name": "MARCHF3", "tax_name": "Human" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "Q63635", "url": "https://www.uniprot.org/uniprotkb/Q63635" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.16428329", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A novel syntaxin 6-interacting protein, SHIP164, regulates syntaxin 6-dependent sorting from early endosomes.", "journal": "Traffic", "date": "2010", "authors": "Otto GP, Razi M, Morvan J, Stenner F, Tooze SA", "reference": { "type": "PubMed", "id": "20163565", "url": "https://pubmed.ncbi.nlm.nih.gov/20163565" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q63635-1", "protein_name": "Syntaxin-6", "gene_name": "Stx6", "tax_name": "Rat" }, { "uniprot_canonical_ac": "O43752-1", "protein_name": "Syntaxin-6", "gene_name": "STX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N1B4-1", "protein_name": "Vacuolar protein sorting-associated protein 52 homolog", "gene_name": "VPS52", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0JNW5-1", "protein_name": "Bridge-like lipid transfer protein family member 3B", "gene_name": "BLTP3B", "tax_name": "Human" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "Q63635", "url": 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trafficking vesicles by combinatorial interaction with tethering factors.", "journal": "Nature communications", "date": "2019-04-08", "authors": "Koike Seiichi, Jahn Reinhard", "reference": { "type": "PubMed", "id": "30962439", "url": "https://pubmed.ncbi.nlm.nih.gov/30962439" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q63635-1", "protein_name": "Syntaxin-6", "gene_name": "Stx6", "tax_name": "Rat" }, { "uniprot_canonical_ac": "G3V7P1-1", "protein_name": "Syntaxin-12", "gene_name": "Stx12", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q7Z7G8-1", "protein_name": "Intermembrane lipid transfer protein VPS13B", "gene_name": "VPS13B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q80TY5-1", "protein_name": "Intermembrane lipid transfer protein VPS13B", "gene_name": "Vps13b", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q3UVL4-1", "protein_name": "Vacuolar protein sorting-associated protein 51 homolog", "gene_name": "Vps51", "tax_name": 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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Biol. 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"total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl", "filter_code", "uniprot_canonical_ac", "mining_tool" ] } ] }, { "title": "O-GlcNAcomic Profiling Identifies Widespread O-Linked beta-N-Acetylglucosamine Modification (O-GlcNAcylation) in Oxidative Phosphorylation System Regulating Cardiac Mitochondrial Function.", "journal": "The Journal of biological chemistry", "date": "2015", "authors": "Ma J, Liu T, Wei AC, Banerjee P, O'Rourke B, Hart GW", "reference": { "type": "PubMed", "id": "26446791", "url": "https://pubmed.ncbi.nlm.nih.gov/26446791" }, "referenced_glycans": [ { "glytoucan_ac": "G49108TO" } ], "referenced_proteins": [ { "uniprot_canonical_ac": "Q68FY0-1", "protein_name": "Cytochrome b-c1 complex subunit 1, mitochondrial", "gene_name": "Uqcrc1", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q6P6R2-1", "protein_name": "Dihydrolipoyl dehydrogenase, mitochondrial", "gene_name": "Dld", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q64428-1", "protein_name": 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"uniprot_canonical_ac" ] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Comparative Proteomics Reveals Dysregulated Mitochondrial O-GlcNAcylation in 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"referenced_proteins": [ { "uniprot_canonical_ac": "Q68FY0-1", "protein_name": "Cytochrome b-c1 complex subunit 1, mitochondrial", "gene_name": "Uqcrc1", "tax_name": "Rat" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "Q68FY0", "url": "https://www.uniprot.org/uniprotkb/Q68FY0" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.32819597", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", 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Neurochem.", "date": "2003", "authors": "Pignot V, Hein AE, Barske C, Wiessner C, Walmsley AR, Kaupmann K, Mayeur H, Sommer B, Mir AK, Frentzel S", "reference": { "type": "PubMed", "id": "12694398", "url": "https://pubmed.ncbi.nlm.nih.gov/12694398" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q80WD0-1", "protein_name": "Reticulon-4 receptor-like 1", "gene_name": "Rtn4rl1", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q80WD1-1", "protein_name": "Reticulon-4 receptor-like 2", "gene_name": "Rtn4rl2", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q86UN2-1", "protein_name": "Reticulon-4 receptor-like 1", "gene_name": "RTN4RL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BZR6-1", "protein_name": "Reticulon-4 receptor", "gene_name": "RTN4R", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86UN3-1", "protein_name": "Reticulon-4 receptor-like 2", "gene_name": "RTN4RL2", "tax_name": "Human" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "Q80WD0", "url": "https://www.uniprot.org/uniprotkb/Q80WD0" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.12694398", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Nogo-66 receptor homolog NgR2 is a sialic acid-dependent receptor selective for myelin-associated glycoprotein.", "journal": "J. Neurosci.", "date": "2005", "authors": "Venkatesh K, Chivatakarn O, Lee H, Joshi PS, Kantor DB, Newman BA, Mage R, Rader C, Giger RJ", "reference": { "type": "PubMed", "id": "15673660", "url": "https://pubmed.ncbi.nlm.nih.gov/15673660" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q80WD0-1", "protein_name": "Reticulon-4 receptor-like 1", "gene_name": "Rtn4rl1", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q80WD1-1", "protein_name": "Reticulon-4 receptor-like 2", "gene_name": "Rtn4rl2", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q99M75-1", "protein_name": "Reticulon-4 receptor", "gene_name": "Rtn4r", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q7M6Z0-1", "protein_name": "Reticulon-4 receptor-like 2", "gene_name": "Rtn4rl2", "tax_name": "Mouse" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "Q80WD0", "url": "https://www.uniprot.org/uniprotkb/Q80WD0" } ], "common_name": "Rat", 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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Spatio-temporal expression pattern of receptors for myelin-associated inhibitors in the developing rat olfactory system.", "journal": "Brain research", "date": "2009", "authors": "Richard M, Sacquet J, Jourdan F, Pellier-Monnin V", "reference": { "type": "PubMed", "id": "19063867", "url": "https://pubmed.ncbi.nlm.nih.gov/19063867" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q80WD0-1", "protein_name": "Reticulon-4 receptor-like 1", "gene_name": "Rtn4rl1", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q80WD1-1", "protein_name": "Reticulon-4 receptor-like 2", "gene_name": "Rtn4rl2", "tax_name": "Rat" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "Q80WD0", "url": "https://www.uniprot.org/uniprotkb/Q80WD0" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.19063867", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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Chem.", "date": "1989", "authors": "Franzblau C, Pratt C A, Faris B, Colannino N M, Offner G D, Mogayzel P J, Troxler R F", "reference": { "type": "PubMed", "id": "2768256", "url": "https://pubmed.ncbi.nlm.nih.gov/2768256" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q99372-1", "protein_name": "Elastin", "gene_name": "Eln", "tax_name": "Rat" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "Q99372", "url": "https://www.uniprot.org/uniprotkb/Q99372" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.2768256", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of rat heart tropoelastin.", "journal": "Arch. Biochem. Biophys.", "date": "1989", "authors": "Rich C B, Foster J A", "reference": { "type": "PubMed", "id": "2913947", "url": "https://pubmed.ncbi.nlm.nih.gov/2913947" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q99372-1", "protein_name": "Elastin", "gene_name": "Eln", "tax_name": "Rat" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "Q99372", "url": "https://www.uniprot.org/uniprotkb/Q99372" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.2913947", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Rat tropoelastin is synthesized from a 3.5-kilobase mRNA.", "journal": "J. 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Chem.", "date": "1988", "authors": "Deak S B, Pierce R A, Belsky S A, Riley D J, Boyd C D", "reference": { "type": "PubMed", "id": "2971041", "url": "https://pubmed.ncbi.nlm.nih.gov/2971041" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q99372-1", "protein_name": "Elastin", "gene_name": "Eln", "tax_name": "Rat" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "Q99372", "url": "https://www.uniprot.org/uniprotkb/Q99372" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.2971041", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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Coincon M, Sato Y, Abe H, Nakada-Nakura Y, Hino T, Arakawa T, Kusano-Arai O, Iwanari H, Murata T, Kobayashi T, Hamakubo T, Kasahara M, Iwata S, Drew D", "reference": { "type": "PubMed", "id": "26416735", "url": "https://pubmed.ncbi.nlm.nih.gov/26416735" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P43427-1", "protein_name": "Solute carrier family 2, facilitated glucose transporter member 5", "gene_name": "Slc2a5", "tax_name": "Rat" }, { "uniprot_canonical_ac": "P58353-1", "protein_name": "Solute carrier family 2, facilitated glucose transporter member 5", "gene_name": "LOC107131287; SLC2A5", "tax_name": "Bovine" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "P43427", "url": "https://www.uniprot.org/uniprotkb/P43427" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "mutagenesis": [ { "start_pos": 166, "end_pos": 166, "sequence_org": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Sequence, tissue distribution, and functional characterization of the rat fructose transporter GLUT5.", "journal": "The American journal of physiology", "date": "1993", "authors": "Rand EB, Depaoli AM, Davidson NO, Bell GI, Burant CF", "reference": { "type": "PubMed", "id": "8333543", "url": "https://pubmed.ncbi.nlm.nih.gov/8333543" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P43427-1", "protein_name": "Solute carrier family 2, facilitated glucose transporter member 5", "gene_name": "Slc2a5", "tax_name": "Rat" }, { "uniprot_canonical_ac": "P22732-1", "protein_name": "Solute carrier family 2, facilitated glucose transporter member 5", "gene_name": "SLC2A5", "tax_name": "Human" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "P43427", "url": "https://www.uniprot.org/uniprotkb/P43427" } ], 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U.S.A.", "date": "1993", "authors": "Greenberg A S, Egan J J, Wek S A, Moos M C, Londos C, Kimmel A R", "reference": { "type": "PubMed", "id": "7505452", "url": "https://pubmed.ncbi.nlm.nih.gov/7505452" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P43884-1", "protein_name": "Perilipin-1", "gene_name": "Plin1", "tax_name": "Rat" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "P43884", "url": "https://www.uniprot.org/uniprotkb/P43884" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.7505452", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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H, Misumi Y, Nakayama K, Yamamoto T, Akaike N, Hirata M, Nakayama K", "reference": { "type": "PubMed", "id": "11867528", "url": "https://pubmed.ncbi.nlm.nih.gov/11867528" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q62688-1", "protein_name": "Inactive phospholipase C-like protein 1", "gene_name": "Plcl1", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q15111-1", "protein_name": "Inactive phospholipase C-like protein 1", "gene_name": "PLCL1", "tax_name": "Human" } ], "species": [ { "name": "Rattus norvegicus", "taxid": 10116, "evidence": [ { "database": "UniProtKB", "id": "Q62688", "url": "https://www.uniprot.org/uniprotkb/Q62688" } ], "common_name": "Rat", "glygen_name": "Rat", "reference_species": "Rattus norvegicus [10116]" } ], "record_id": "pubmed.11867528", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { 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