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chemotherapy resistance through the microRNA-580/ 2'-5'-oligoadenylate synthetase 2 axis in acute myeloid leukemia.", "journal": "Bioengineered", "date": "2021", "authors": "Zhou H, Jia X, Yang F, Shi P", "reference": { "type": "PubMed", "id": "34516354", "url": "https://pubmed.ncbi.nlm.nih.gov/34516354" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P29728-1", "protein_name": "2'-5'-oligoadenylate synthase 2", "gene_name": "OAS2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P29728", "url": "https://www.uniprot.org/uniprotkb/P29728" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.34516354", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 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"2013", "authors": "Grarup N, Sulem P, Sandholt CH, Thorleifsson G, Ahluwalia TS, Steinthorsdottir V, Bjarnason H, Gudbjartsson DF, Magnusson OT, Sparso T, Albrechtsen A, Kong A, Masson G, Tian G, Cao H, Nie C, Kristiansen K, Husemoen LL, Thuesen B, Li Y, Nielsen R, Linneberg A, Olafsson I, Eyjolfsson GI, Jorgensen T, Wang J, Hansen T, Thorsteinsdottir U, Stefansson K, Pedersen O", "reference": { "type": "PubMed", "id": "23754956", "url": "https://pubmed.ncbi.nlm.nih.gov/23754956" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8N0X4-1", "protein_name": "Citramalyl-CoA lyase, mitochondrial", "gene_name": "CLYBL", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8N0X4", "url": "https://www.uniprot.org/uniprotkb/Q8N0X4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.23754956", "abstract": "", 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[] } ] }, { "title": "FATS is an E2-independent ubiquitin ligase that stabilizes p53 and promotes its activation in response to DNA damage.", "journal": "Oncogene", "date": "2014", "authors": "Yan S, Qiu L, Ma K, Zhang X, Zhao Y, Zhang J, Li X, Hao X, Li Z", "reference": { "type": "PubMed", "id": "24240685", "url": "https://pubmed.ncbi.nlm.nih.gov/24240685" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96M02-1", "protein_name": "(E2-independent) E3 ubiquitin-conjugating enzyme FATS", "gene_name": "C10orf90", "tax_name": "Human" }, { "uniprot_canonical_ac": "D2J0Y4-1", "protein_name": "(E2-independent) E3 ubiquitin-conjugating enzyme FATS", "gene_name": "D7Ertd443e", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P02340-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "Tp53; Trp53", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96M02", "url": 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"authors": "Tacke R, Tohyama M, Ogawa S, Manley JL", "reference": { "type": "PubMed", "id": "9546399", "url": "https://pubmed.ncbi.nlm.nih.gov/9546399" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P62995-1", "protein_name": "Transformer-2 protein homolog beta", "gene_name": "TRA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13595-1", "protein_name": "Transformer-2 protein homolog alpha", "gene_name": "TRA2A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P62995", "url": "https://www.uniprot.org/uniprotkb/P62995" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9546399", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", 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patients with atypical hemochromatosis.", "journal": "Blood", "date": "2002", "authors": "Hofmann WK, Tong XJ, Ajioka RS, Kushner JP, Koeffler HP", "reference": { "type": "PubMed", "id": "12150153", "url": "https://pubmed.ncbi.nlm.nih.gov/12150153" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UP52-1", "protein_name": "Transferrin receptor protein 2", "gene_name": "TFR2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UP52", "url": "https://www.uniprot.org/uniprotkb/Q9UP52" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12150153", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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"protein_name": "CDK5 regulatory subunit-associated protein 2", "gene_name": "CDK5RAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JB5-1", "protein_name": "CDK5 regulatory subunit-associated protein 3", "gene_name": "CDK5RAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9JLH5-1", "protein_name": "CDK5 regulatory subunit-associated protein 2", "gene_name": "Cdk5rap2", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q9JLH7-1", "protein_name": "CDK5 regulatory subunit-associated protein 3", "gene_name": "Cdk5rap3", "tax_name": "Rat" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96SZ6", "url": "https://www.uniprot.org/uniprotkb/Q96SZ6" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10721722", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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cellular retinaldehyde-binding protein CRALBP-like (CRALBPL) gene.", "journal": "Biotechnol. 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converting enzyme in renal adenocarcinoma (ACHN) cells producing endothelin-2.", "journal": "Biochem. 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0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_n_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl", "mining_tool", "filter_code", "uniprot_canonical_ac" ] } ] }, { "title": "A loss-of-function mutation in the endothelin-converting enzyme 1 (ECE-1) associated with Hirschsprung disease, cardiac defects, and autonomic dysfunction.", "journal": "American journal of human genetics", "date": "1999", "authors": "Hofstra RM, Valdenaire O, Arch E, Osinga J, Kroes H, Loffler BM, Hamosh A, Meijers C, Buys CH", "reference": { "type": "PubMed", "id": "9915973", "url": "https://pubmed.ncbi.nlm.nih.gov/9915973" }, "referenced_glycans": [], 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"count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "SNIP1 inhibits NF-kappa B signaling by competing for its binding to the C/H1 domain of CBP/p300 transcriptional co-activators.", "journal": "The Journal of biological chemistry", "date": "2001", "authors": "Kim RH, Flanders KC, Birkey Reffey S, Anderson LA, Duckett CS, Perkins ND, Roberts AB", "reference": { "type": "PubMed", "id": "11567019", "url": "https://pubmed.ncbi.nlm.nih.gov/11567019" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8TAD8-1", "protein_name": "Smad nuclear-interacting protein 1", "gene_name": "SNIP1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8TAD8", "url": "https://www.uniprot.org/uniprotkb/Q8TAD8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11567019", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A novel link between the proteasome pathway and the signal transduction pathway of the bone morphogenetic proteins (BMPs).", "journal": "BMC Cell Biol.", "date": "2002", "authors": "Lin Y, Martin J, Gruendler C, Farley J, Meng X, Li BY, Lechleider R, Huff C, Kim RH, Grasser WA, Paralkar V, Wang T", "reference": { "type": "PubMed", "id": "12097147", "url": "https://pubmed.ncbi.nlm.nih.gov/12097147" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8TAD8-1", "protein_name": 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Struct. Mol. Biol.", "date": "2012", "authors": "Huang YH, Liu XY, Du XX, Jiang ZF, Su XD", "reference": { "type": "PubMed", "id": "22728659", "url": "https://pubmed.ncbi.nlm.nih.gov/22728659" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86WV6-1", "protein_name": "Stimulator of interferon genes protein", "gene_name": "STING1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86WV6", "url": "https://www.uniprot.org/uniprotkb/Q86WV6" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22728659", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Crystal structures of STING protein reveal basis for recognition of cyclic di-GMP.", "journal": "Nat. 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Biol.", "date": "2012", "authors": "Shang G, Zhu D, Li N, Zhang J, Zhu C, Lu D, Liu C, Yu Q, Zhao Y, Xu S, Gu L", "reference": { "type": "PubMed", "id": "22728660", "url": "https://pubmed.ncbi.nlm.nih.gov/22728660" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86WV6-1", "protein_name": "Stimulator of interferon genes protein", "gene_name": "STING1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86WV6", "url": "https://www.uniprot.org/uniprotkb/Q86WV6" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22728660", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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Biol.", "date": "2014", "authors": "Li Lingyin, Yin Qian, Kuss Pia, Maliga Zoltan, Mill\u00e1n Jos\u00e9 L, Wu Hao, Mitchison Timothy J", "reference": { "type": "PubMed", "id": "25344812", "url": "https://pubmed.ncbi.nlm.nih.gov/25344812" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86WV6-1", "protein_name": "Stimulator of interferon genes protein", "gene_name": "STING1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06802-1", "protein_name": "Ectonucleotide pyrophosphatase/phosphodiesterase family member 1", "gene_name": "Enpp1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P22413-1", "protein_name": "Ectonucleotide pyrophosphatase/phosphodiesterase family member 1", "gene_name": "ENPP1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86WV6", "url": "https://www.uniprot.org/uniprotkb/Q86WV6" } ], "common_name": "Human", "glygen_name": "Human", 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