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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Functional analysis of Sox10 mutations found in human Waardenburg-Hirschsprung patients.", "journal": "J. Biol. Chem.", "date": "1998", "authors": "Kuhlbrodt K, Schmidt C, Sock E, Pingault V, Bondurand N, Goossens M, Wegner M", "reference": { "type": "PubMed", "id": "9722528", "url": "https://pubmed.ncbi.nlm.nih.gov/9722528" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P56693-1", "protein_name": "Transcription factor SOX-10", "gene_name": "SOX10", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P56693", "url": "https://www.uniprot.org/uniprotkb/P56693" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9722528", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "New mammalian selenocysteine-containing proteins identified with an algorithm that searches for selenocysteine insertion sequence elements.", "journal": "The Journal of biological chemistry", "date": "1999", "authors": "Kryukov GV, Kryukov VM, Gladyshev VN", "reference": { "type": "PubMed", "id": "10567350", "url": "https://pubmed.ncbi.nlm.nih.gov/10567350" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UJ68-1", "protein_name": "Mitochondrial peptide methionine sulfoxide reductase", "gene_name": "MSRA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IXL7-1", "protein_name": "Methionine-R-sulfoxide reductase B3", "gene_name": "MSRB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9JLC3-1", "protein_name": "Methionine-R-sulfoxide reductase B1", "gene_name": "Msrb1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NZV6-1", "protein_name": "Methionine-R-sulfoxide reductase B1", "gene_name": "MSRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10599-1", "protein_name": "Thioredoxin", "gene_name": "TXN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22061-1", "protein_name": "Protein-L-isoaspartate(D-aspartate) O-methyltransferase", "gene_name": "PCMT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3D2-1", "protein_name": "Methionine-R-sulfoxide reductase B2, mitochondrial", "gene_name": "MSRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62341-1", "protein_name": "Thioredoxin reductase-like selenoprotein T", "gene_name": "SELENOT", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UJ68", "url": "https://www.uniprot.org/uniprotkb/Q9UJ68" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": 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mutagenesis of a human peptide methionine sulfoxide reductase of type B: hCBS1.", "journal": "FEBS letters", "date": "2002", "authors": "Jung S, Hansel A, Kasperczyk H, Hoshi T, Heinemann SH", "reference": { "type": "PubMed", "id": "12220640", "url": "https://pubmed.ncbi.nlm.nih.gov/12220640" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UJ68-1", "protein_name": "Mitochondrial peptide methionine sulfoxide reductase", "gene_name": "MSRA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IXL7-1", "protein_name": "Methionine-R-sulfoxide reductase B3", "gene_name": "MSRB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZV6-1", "protein_name": "Methionine-R-sulfoxide reductase B1", "gene_name": "MSRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10599-1", "protein_name": "Thioredoxin", "gene_name": "TXN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22061-1", "protein_name": "Protein-L-isoaspartate(D-aspartate) 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Function of the cloned putative neutral sphingomyelinase as lyso-platelet activating factor-phospholipase C.", "journal": "The Journal of biological chemistry", "date": "1999-12-31", "authors": "Sawai H, Domae N, Nagan N, Hannun Y A", "reference": { "type": "PubMed", "id": "10608884", "url": "https://pubmed.ncbi.nlm.nih.gov/10608884" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O60906-1", "protein_name": "Sphingomyelin phosphodiesterase 2", "gene_name": "SMPD2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O60906", "url": "https://www.uniprot.org/uniprotkb/O60906" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10608884", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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factor associated with neutral sphingomyelinase activation, a WD motif-containing protein, identifies receptor for activated C-kinase 1 as a novel component of the signaling pathways of the p55 TNF receptor.", "journal": "Journal of immunology (Baltimore, Md. : 1950)", "date": "2002", "authors": "Tcherkasowa AE, Adam-Klages S, Kruse ML, Wiegmann K, Mathieu S, Kolanus W, Kronke M, Adam D", "reference": { "type": "PubMed", "id": "12391233", "url": "https://pubmed.ncbi.nlm.nih.gov/12391233" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O60906-1", "protein_name": "Sphingomyelin phosphodiesterase 2", "gene_name": "SMPD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19438-1", "protein_name": "Tumor necrosis factor receptor superfamily member 1A", "gene_name": "TNFRSF1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92636-1", "protein_name": "Protein FAN", "gene_name": "NSMAF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01375-1", 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: CCS", "date": "2023-10-30", "authors": "Risner Michael L, Ribeiro Marcio, McGrady Nolan R, Kagitapalli Bhanu S, Chamling Xitiz, Zack Donald J, Calkins David J", "reference": { "type": "PubMed", "id": "37904133", "url": "https://pubmed.ncbi.nlm.nih.gov/37904133" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O60906-1", "protein_name": "Sphingomyelin phosphodiesterase 2", "gene_name": "SMPD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O70572-1", "protein_name": "Sphingomyelin phosphodiesterase 2", "gene_name": "Smpd2", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O60906", "url": "https://www.uniprot.org/uniprotkb/O60906" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.37904133", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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TNF-receptor to neutral sphingomyelinase.", "journal": "Cell", "date": "1996", "authors": "Adam-Klages S, Adam D, Wiegmann K, Struve S, Kolanus W, Schneider-Mergener J, Kronke M", "reference": { "type": "PubMed", "id": "8808629", "url": "https://pubmed.ncbi.nlm.nih.gov/8808629" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O60906-1", "protein_name": "Sphingomyelin phosphodiesterase 2", "gene_name": "SMPD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19438-1", "protein_name": "Tumor necrosis factor receptor superfamily member 1A", "gene_name": "TNFRSF1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92636-1", "protein_name": "Protein FAN", "gene_name": "NSMAF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01375-1", "protein_name": "Tumor necrosis factor", "gene_name": "TNF", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY59-1", "protein_name": "Sphingomyelin phosphodiesterase 3", "gene_name": "SMPD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63244-1", "protein_name": "Small ribosomal subunit protein RACK1", "gene_name": "RACK1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O60906", "url": "https://www.uniprot.org/uniprotkb/O60906" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8808629", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", 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Cell Biol.", "date": "2004", "authors": "Obuse C, Iwasaki O, Kiyomitsu T, Goshima G, Toyoda Y, Yanagida M", "reference": { "type": "PubMed", "id": "15502821", "url": "https://pubmed.ncbi.nlm.nih.gov/15502821" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96IY1-1", "protein_name": "Kinetochore-associated protein NSL1 homolog", "gene_name": "NSL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14777-1", "protein_name": "Kinetochore protein NDC80 homolog", "gene_name": "NDC80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13185-1", "protein_name": "Chromobox protein homolog 3", "gene_name": "CBX3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45973-1", "protein_name": "Chromobox protein homolog 5", "gene_name": "CBX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95229-1", "protein_name": "Outer kinetochore KNL1 complex subunit ZWINT", "gene_name": "ZWINT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NG31-1", 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"date": "2000", "authors": "Almrud JJ, Oliveira MA, Kern AD, Grishin NV, Phillips MA, Hackert ML", "reference": { "type": "PubMed", "id": "10623504", "url": "https://pubmed.ncbi.nlm.nih.gov/10623504" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O95190-1", "protein_name": "Ornithine decarboxylase antizyme 2", "gene_name": "OAZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54368-1", "protein_name": "Ornithine decarboxylase antizyme 1", "gene_name": "OAZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52788-1", "protein_name": "Spermine synthase", "gene_name": "SMS", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMX2-1", "protein_name": "Ornithine decarboxylase antizyme 3", "gene_name": "OAZ3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19623-1", "protein_name": "Spermidine synthase", "gene_name": "SRM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17707-1", "protein_name": "S-adenosylmethionine decarboxylase 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"date": "2021", "authors": "Hershkovitz T, Kurolap A, Tal G, Paperna T, Mory A, Staples J, Brigatti KW, Gonzaga-Jauregui C, Dumin E, Saada A, Mandel H, Baris Feldman H", "reference": { "type": "PubMed", "id": "33457206", "url": "https://pubmed.ncbi.nlm.nih.gov/33457206" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y697-1", "protein_name": "Cysteine desulfurase", "gene_name": "NFS1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y697", "url": "https://www.uniprot.org/uniprotkb/Q9Y697" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.33457206", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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{ "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Role of NADH Dehydrogenase (Ubiquinone) 1 Alpha Subcomplex 4-Like 2 in Clear Cell Renal Cell Carcinoma.", "journal": "Clinical cancer research : an official journal of the American Association for Cancer Research", "date": "2016", "authors": "Minton DR, Fu L, Mongan NP, Shevchuk MM, Nanus DM, Gudas LJ", "reference": { "type": "PubMed", "id": "26783287", "url": "https://pubmed.ncbi.nlm.nih.gov/26783287" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NRX3-1", "protein_name": "Cytochrome c oxidase 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "NDUFA4L2 Fine-tunes Oxidative Stress in Hepatocellular Carcinoma.", "journal": "Clinical cancer research : an official journal of the American Association for Cancer Research", "date": "2016", "authors": "Lai RK, Xu IM, Chiu DK, Tse AP, Wei LL, Law CT, Lee D, Wong CM, Wong MP, Ng IO, Wong CC", "reference": { "type": "PubMed", "id": "26819450", "url": "https://pubmed.ncbi.nlm.nih.gov/26819450" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NRX3-1", "protein_name": "Cytochrome c oxidase hypoxia associated subunit FA4L2", "gene_name": "COXFA4L2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NRX3", "url": "https://www.uniprot.org/uniprotkb/Q9NRX3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo 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Y, Tang X", "reference": { "type": "PubMed", "id": "27453328", "url": "https://pubmed.ncbi.nlm.nih.gov/27453328" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NRX3-1", "protein_name": "Cytochrome c oxidase hypoxia associated subunit FA4L2", "gene_name": "COXFA4L2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NRX3", "url": "https://www.uniprot.org/uniprotkb/Q9NRX3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.27453328", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", 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