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Cell. Biol.", "date": "2003", "authors": "Nguyen Minh M, Nguyen Marie L, Caruana Georgina, Bernstein Alan, Lambert Paul F, Griep Anne E", "reference": { "type": "PubMed", "id": "14645510", "url": "https://pubmed.ncbi.nlm.nih.gov/14645510" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9EQJ9-1", "protein_name": "Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3", "gene_name": "Magi3", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9EQJ9", "url": "https://www.uniprot.org/uniprotkb/Q9EQJ9" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.14645510", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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"https://www.uniprot.org/uniprotkb/Q8VHJ5" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.38484863", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], 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chromosomal localization of the cognate human and murine DBF4 genes.", "journal": "Mol. Gen. Genet.", "date": "1999", "authors": "Lepke M, Putter V, Staib C, Kneissl M, Berger C, Hoehn K, Nanda I, Schmid M, Grummt F", "reference": { "type": "PubMed", "id": "10517317", "url": "https://pubmed.ncbi.nlm.nih.gov/10517317" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P97310-1", "protein_name": "DNA replication licensing factor MCM2", "gene_name": "Mcm2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9Z0H0-1", "protein_name": "Cell division cycle 7-related protein kinase", "gene_name": "Cdc7", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9QZ41-1", "protein_name": "Protein DBF4 homolog A", "gene_name": "Dbf4", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P97310", "url": "https://www.uniprot.org/uniprotkb/P97310" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.10517317", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"sequence_mut": "AA", "comment": "Decreased MCM complex DNA helicase activity. Loss of ATP-binding. Decreased MCM complex ATPase activity. No effect on MCM complex formation.", "evidence": [ { "database": "UniProtKB", "id": "P97311", "url": "https://www.uniprot.org/uniprotkb/P97311" }, { "database": "PubMed", "id": "10567526", "url": "https://pubmed.ncbi.nlm.nih.gov/10567526" } ], "uniprot_canonical_ac": "P97311-1" }, { "start_pos": 460, "end_pos": 461, "sequence_org": "DE", "sequence_mut": "AA", "comment": "Loss of MCM complex DNA helicase activity. Loss of ATP-binding. No effect on MCM complex formation. No effect on MCM complex ATPase activity and ssDNA binding.", "evidence": [ { "database": "UniProtKB", "id": "P97311", "url": "https://www.uniprot.org/uniprotkb/P97311" }, { "database": "PubMed", "id": "10567526", "url": "https://pubmed.ncbi.nlm.nih.gov/10567526" } ], "uniprot_canonical_ac": "P97311-1" }, { "start_pos": 573, "end_pos": 574, "sequence_org": "DE", "sequence_mut": "AA", "comment": "Decreased MCM complex DNA helicase activity. Reduced ssDNA binding. No effect on MCM complex formation. No effect on MCM complex ATP binding and ATPase activity.", "evidence": [ { "database": "UniProtKB", "id": "P49717", "url": "https://www.uniprot.org/uniprotkb/P49717" }, { "database": "PubMed", "id": "10567526", "url": "https://pubmed.ncbi.nlm.nih.gov/10567526" } ], "uniprot_canonical_ac": "P49717-1" } ], "record_id": "pubmed.10567526", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Replication factors MCM2 and ORC1 interact with the histone acetyltransferase HBO1.", "journal": "The Journal of biological chemistry", "date": "2001", "authors": "Burke TW, Cook JG, Asano M, Nevins JR", "reference": { "type": "PubMed", "id": "11278932", "url": "https://pubmed.ncbi.nlm.nih.gov/11278932" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P97310-1", "protein_name": "DNA replication licensing factor MCM2", "gene_name": "Mcm2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O95251-1", "protein_name": "Histone acetyltransferase KAT7", "gene_name": "KAT7", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P97310", "url": "https://www.uniprot.org/uniprotkb/P97310" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 237, "end_pos": 237, "sequence_org": "L", "sequence_mut": "P", "comment": "Impairs interaction with KAT7.", "evidence": [ { "database": "UniProtKB", "id": "P97310", "url": "https://www.uniprot.org/uniprotkb/P97310" }, { "database": "PubMed", "id": "11278932", "url": "https://pubmed.ncbi.nlm.nih.gov/11278932" } ], "uniprot_canonical_ac": "P97310-1" }, { "start_pos": 371, "end_pos": 371, "sequence_org": "C", "sequence_mut": "A", "comment": "No interaction with MCM2 and ORC1.", "evidence": [ { "database": "UniProtKB", "id": "O95251", "url": "https://www.uniprot.org/uniprotkb/O95251" }, { "database": "PubMed", "id": "11278932", "url": "https://pubmed.ncbi.nlm.nih.gov/11278932" } ], "uniprot_canonical_ac": "O95251-1" } ], "record_id": "pubmed.11278932", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "AANL (Agrocybe aegerita lectin 2) is a new facile tool to probe for O-GlcNAcylation.", "journal": "Glycobiology", "date": "2018", "authors": "Liu W, Han G, Yin Y, Jiang S, Yu G, Yang Q, Yu W, Ye X, Su Y, Yang Y, Hart GW, Sun H", "reference": { "type": "PubMed", "id": "29562282", "url": "https://pubmed.ncbi.nlm.nih.gov/29562282" }, "referenced_glycans": [ { "glytoucan_ac": "G49108TO" } ], "referenced_proteins": [ { "uniprot_canonical_ac": "P97310-1", "protein_name": "DNA replication licensing factor MCM2", 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0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Transcriptional 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Szmyd R, Low D, Diril MK, Chang HY, Coppola V, Liu K, Tessarollo L, Guccione E, van Pelt AMM, Kaldis P", "reference": { "type": "PubMed", "id": "28723571", "url": "https://pubmed.ncbi.nlm.nih.gov/28723571" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8CDI2-1", "protein_name": "F-box only protein 43", "gene_name": "Fbxo43", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8CDI2", "url": "https://www.uniprot.org/uniprotkb/Q8CDI2" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.28723571", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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Immunol.", "date": "1998", "authors": "Miyake K, Shimazu R, Kondo J, Niki T, Akashi S, Ogata H, Yamashita Y, Miura Y, Kimoto M", "reference": { "type": "PubMed", "id": "9686597", "url": "https://pubmed.ncbi.nlm.nih.gov/9686597" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O88188-1", "protein_name": "Lymphocyte antigen 86", "gene_name": "Ly86", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q62192-1", "protein_name": "CD180 antigen", "gene_name": "Cd180", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O88188", "url": "https://www.uniprot.org/uniprotkb/O88188" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.9686597", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { 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Biol. 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Sci.", "date": "1991", "authors": "Gerard NP, Gerard C", "reference": { "type": "PubMed", "id": "1659296", "url": "https://pubmed.ncbi.nlm.nih.gov/1659296" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P21452-1", "protein_name": "Substance-K receptor", "gene_name": "TACR2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P21452", "url": "https://www.uniprot.org/uniprotkb/P21452" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.1659296", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": 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Biophys. Res. 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"Neutral sphingomyelinase-3 mediates TNF-stimulated oxidant activity in skeletal muscle.", "journal": "Redox biology", "date": "2014", "authors": "Moylan Jennifer S, Smith Jeffrey D, Wolf Horrell Erin M, McLean Julie B, Deevska Gergana M, Bonnell Mark R, Nikolova-Karakashian Mariana N, Reid Michael B", "reference": { "type": "PubMed", "id": "25180167", "url": "https://pubmed.ncbi.nlm.nih.gov/25180167" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NXE4-1", "protein_name": "Sphingomyelin phosphodiesterase 4", "gene_name": "SMPD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZPR5-1", "protein_name": "Sphingomyelin phosphodiesterase 4", "gene_name": "Smpd4", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NXE4", "url": "https://www.uniprot.org/uniprotkb/Q9NXE4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], 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maintenance of chromosomes protein 5", "gene_name": "SMC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MF7-1", "protein_name": "E3 SUMO-protein ligase NSE2", "gene_name": "NSMCE2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WV22-1", "protein_name": "Non-structural maintenance of chromosomes element 1 homolog", "gene_name": "NSMCE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MG7-1", "protein_name": "Non-structural maintenance of chromosomes element 3 homolog", "gene_name": "NSMCE3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N140-1", "protein_name": "EP300-interacting inhibitor of differentiation 3", "gene_name": "EID3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96SB8", "url": "https://www.uniprot.org/uniprotkb/Q96SB8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18086888", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "DNA repair. Proteomics reveals dynamic assembly of repair complexes during bypass of DNA cross-links.", "journal": "Science", "date": "2015", "authors": "Raschle M, Smeenk G, Hansen RK, Temu T, Oka Y, Hein MY, Nagaraj N, Long DT, Walter JC, Hofmann K, Storchova Z, Cox J, Bekker-Jensen S, Mailand N, Mann M", "reference": { "type": "PubMed", "id": "25931565", "url": "https://pubmed.ncbi.nlm.nih.gov/25931565" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96SB8-1", "protein_name": "Structural maintenance of chromosomes protein 6", "gene_name": "SMC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NS91-1", "protein_name": "E3 ubiquitin-protein ligase RAD18", "gene_name": "RAD18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY18-1", "protein_name": "Structural maintenance of chromosomes protein 5", "gene_name": "SMC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IX21-1", "protein_name": "SMC5-SMC6 complex localization factor protein 2", "gene_name": "SLF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQI6-1", "protein_name": "SMC5-SMC6 complex localization factor protein 1", "gene_name": "SLF1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96SB8", "url": "https://www.uniprot.org/uniprotkb/Q96SB8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 442, "end_pos": 442, "sequence_org": "S", "sequence_mut": "A", "comment": "Does not interact with SLF1 and is defective in restoring cell survival after DNA damage; when associated with A-444.", "evidence": [ { "database": "UniProtKB", "id": "Q9NS91", "url": "https://www.uniprot.org/uniprotkb/Q9NS91" }, { "database": "PubMed", "id": "25931565", "url": "https://pubmed.ncbi.nlm.nih.gov/25931565" }, { "database": "PubMed", "id": "22036607", "url": "https://pubmed.ncbi.nlm.nih.gov/22036607" } ], "uniprot_canonical_ac": "Q9NS91-1" }, { "start_pos": 444, "end_pos": 444, "sequence_org": "S", "sequence_mut": "A", "comment": "Does not interact with SLF1 and is defective in restoring cell survival after DNA damage; when associated with A-442.", "evidence": [ { "database": "UniProtKB", "id": "Q9NS91", "url": "https://www.uniprot.org/uniprotkb/Q9NS91" }, { "database": "PubMed", "id": "25931565", "url": "https://pubmed.ncbi.nlm.nih.gov/25931565" }, { "database": "PubMed", "id": "22036607", "url": "https://pubmed.ncbi.nlm.nih.gov/22036607" } ], "uniprot_canonical_ac": "Q9NS91-1" } ], "record_id": "pubmed.25931565", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], 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"sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Hepatitis B virus X protein identifies the Smc5/6 complex as a host restriction factor.", "journal": "Nature", "date": "2016", "authors": "Decorsiere A, Mueller H, van Breugel PC, Abdul F, Gerossier L, Beran RK, Livingston CM, Niu C, Fletcher SP, Hantz O, Strubin M", "reference": { "type": "PubMed", "id": "26983541", "url": "https://pubmed.ncbi.nlm.nih.gov/26983541" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96SB8-1", "protein_name": "Structural maintenance of chromosomes protein 6", "gene_name": "SMC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY18-1", "protein_name": "Structural maintenance of chromosomes protein 5", "gene_name": "SMC5", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96SB8", "url": "https://www.uniprot.org/uniprotkb/Q96SB8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.26983541", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Epstein-Barr virus BNRF1 destabilizes SMC5/6 cohesin complexes to evade its restriction of replication compartments.", "journal": "Cell Rep.", "date": "2022", "authors": "Yiu Stephanie Pei Tung, Guo Rui, Zerbe Cassie, Weekes Michael P, Gewurz Benjamin E", "reference": { "type": "PubMed", "id": "35263599", "url": "https://pubmed.ncbi.nlm.nih.gov/35263599" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96SB8-1", "protein_name": "Structural maintenance of chromosomes protein 6", "gene_name": "SMC6", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96SB8", "url": "https://www.uniprot.org/uniprotkb/Q96SB8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.35263599", 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