[ { "title": "ALOG domains: provenance of plant homeotic and developmental regulators from the DNA-binding domain of a novel class of DIRS1-type retroposons.", "journal": "Biol. Direct", "date": "2012", "authors": "Iyer Lakshminarayan M, Aravind L", "reference": { "type": "PubMed", "id": "23146749", "url": "https://pubmed.ncbi.nlm.nih.gov/23146749" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M836-1", "protein_name": "Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 2", "gene_name": "LSH2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7R3-1", "protein_name": "Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10", "gene_name": "LSH10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SN52-1", "protein_name": "Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9", "gene_name": "LSH9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NNI3-1", "protein_name": "Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1", "gene_name": "LSH1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LW68-1", "protein_name": "Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4", "gene_name": "LSH4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FZ51-1", "protein_name": "Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 8", "gene_name": "LSH8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZVA0-1", "protein_name": "Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 7", "gene_name": "LSH7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FGH2-1", "protein_name": "Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5", "gene_name": "LSH5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82268-1", "protein_name": "Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3", "gene_name": "LSH3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LMK2-1", "protein_name": "Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6", "gene_name": "LSH6", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M836", "url": "https://www.uniprot.org/uniprotkb/Q9M836" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.23146749", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 10 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Functional identification of an Arabidopsis pectin biosynthetic homogalacturonan galacturonosyltransferase.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "2006", "authors": "Sterling Jason D, Atmodjo Melani A, Inwood Sarah E, Kumar Kolli V S, Quigley Heather F, Hahn Michael G, Mohnen Debra", "reference": { "type": "PubMed", "id": "16540543", "url": "https://pubmed.ncbi.nlm.nih.gov/16540543" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M8J2-1", "protein_name": "Probable galacturonosyltransferase-like 4", "gene_name": "GATL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7G2-1", "protein_name": "Probable galacturonosyltransferase-like 2", "gene_name": "GATL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WQD2-1", "protein_name": "Probable galacturonosyltransferase 3", "gene_name": "GAUT3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZVI7-1", "protein_name": "Probable galacturonosyltransferase 7", "gene_name": "GAUT7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RXE1-1", "protein_name": "Probable galacturonosyltransferase 5", "gene_name": "GAUT5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93ZX7-1", "protein_name": "Probable galacturonosyltransferase 4", "gene_name": "GAUT4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FWY9-1", "protein_name": "Probable galacturonosyltransferase-like 5", "gene_name": "GATL5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M9Y5-1", "protein_name": "Probable galacturonosyltransferase 6", "gene_name": "GAUT6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L4B0-1", "protein_name": "Probable galacturonosyltransferase 15", "gene_name": "GAUT15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VYF4-1", "protein_name": "Probable galacturonosyltransferase-like 7", "gene_name": "GATL7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04253-1", "protein_name": "Probable galacturonosyltransferase-like 6", "gene_name": "GATL6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04536-1", "protein_name": "Probable galacturonosyltransferase-like 9", "gene_name": "GATL9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48684-1", "protein_name": "Probable galacturonosyltransferase-like 8", "gene_name": "GATL8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0V7R1-1", "protein_name": "Probable galacturonosyltransferase-like 3", "gene_name": "GATL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GWT1-1", "protein_name": "Probable galacturonosyltransferase 14", "gene_name": "GAUT14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q949Q1-1", "protein_name": "Hexosyltransferase GAUT11", "gene_name": "GAUT11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FH36-1", "protein_name": "Probable galacturonosyltransferase 12", "gene_name": "GAUT12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LN68-1", "protein_name": "Probable galacturonosyltransferase-like 1", "gene_name": "GATL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSG3-1", "protein_name": "Galacturonosyltransferase 8", "gene_name": "GAUT8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FWA4-1", "protein_name": "Probable galacturonosyltransferase 9", "gene_name": "GAUT9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LHD2-1", "protein_name": "Probable galacturonosyltransferase-like 10", "gene_name": "GATL10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WV13-1", "protein_name": "Probable galacturonosyltransferase 13", "gene_name": "GAUT13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LE59-1", "protein_name": "Polygalacturonate 4-alpha-galacturonosyltransferase", "gene_name": "GAUT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZPZ1-1", "protein_name": "Putative galacturonosyltransferase 2", "gene_name": "GAUT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SKT6-1", "protein_name": "Probable galacturonosyltransferase 10", "gene_name": "GAUT10", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M8J2", "url": "https://www.uniprot.org/uniprotkb/Q9M8J2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16540543", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 25 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis FHY3/FAR1 gene family and distinct roles of its members in light control of Arabidopsis development.", "journal": "Plant Physiol.", "date": "2004", "authors": "Lin Rongcheng, Wang Haiyang", "reference": { "type": "PubMed", "id": "15591448", "url": "https://pubmed.ncbi.nlm.nih.gov/15591448" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M8J3-1", "protein_name": "Protein FAR1-RELATED SEQUENCE 7", "gene_name": "FRS7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S793-1", "protein_name": "Protein FAR1-RELATED SEQUENCE 8", "gene_name": "FRS8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LKR4-1", "protein_name": "Putative protein FAR1-RELATED SEQUENCE 10", "gene_name": "FRS10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZL8-1", "protein_name": "Protein FAR1-RELATED SEQUENCE 5", "gene_name": "FRS5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZVC9-1", "protein_name": "Protein FAR1-RELATED SEQUENCE 3", "gene_name": "FRS3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSQ4-1", "protein_name": "Protein FAR1-RELATED SEQUENCE 6", "gene_name": "FRS6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZL7-1", "protein_name": "Protein FAR1-RELATED SEQUENCE 9", "gene_name": "FRS9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SY66-1", "protein_name": "Protein FAR1-RELATED SEQUENCE 11", "gene_name": "FRS11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NQJ7-1", "protein_name": "Protein FAR1-RELATED SEQUENCE 4", "gene_name": "FRS4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3EBQ3-1", "protein_name": "Protein FAR1-RELATED SEQUENCE 2", "gene_name": "FRS2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3E7I5-1", "protein_name": "Protein FAR1-RELATED SEQUENCE 12", "gene_name": "FRS12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LIE5-1", "protein_name": "Protein FAR-RED ELONGATED HYPOCOTYL 3", "gene_name": "FHY3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q5UBY2-1", "protein_name": "Protein FAR1-RELATED SEQUENCE 1", "gene_name": "FRS1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SWG3-1", "protein_name": "Protein FAR-RED IMPAIRED RESPONSE 1", "gene_name": "FAR1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M8J3", "url": "https://www.uniprot.org/uniprotkb/Q9M8J3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15591448", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 14 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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Brad, Klessig Dan, Lee Justin, Martin Greg, Mundy John, Ohashi Yuko, Scheel Dierk, Sheen Jen, Xing Tim, Zhang Shuqun, Seguin Armand, Ellis Brian E", "reference": { "type": "PubMed", "id": "16537113", "url": "https://pubmed.ncbi.nlm.nih.gov/16537113" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M8J5-1", "protein_name": "Mitogen-activated protein kinase kinase 8", "gene_name": "MKK8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39025-1", "protein_name": "Mitogen-activated protein kinase 5", "gene_name": "MPK5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LV37-1", "protein_name": "Mitogen-activated protein kinase 9", "gene_name": "MPK9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39024-1", "protein_name": "Mitogen-activated protein kinase 4", "gene_name": "MPK4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23236-1", "protein_name": "Mitogen-activated protein kinase 14", "gene_name": "MPK14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W4J2-1", "protein_name": "Mitogen-activated protein kinase 16", "gene_name": "MPK16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9U4-1", "protein_name": "Mitogen-activated protein kinase 15", "gene_name": "MPK15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LQM8-1", "protein_name": "Mitogen-activated protein kinase kinase 10", "gene_name": "MKK10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GYQ5-1", "protein_name": "Mitogen-activated protein kinase 12", "gene_name": "MPK12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LMM5-1", "protein_name": "Mitogen-activated protein kinase 11", "gene_name": "MPK11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FX43-1", "protein_name": "Mitogen-activated protein kinase kinase 9", "gene_name": "MKK9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80396-1", "protein_name": "Mitogen-activated protein kinase kinase 3", "gene_name": "MKK3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80397-1", "protein_name": "Mitogen-activated protein kinase kinase 4", "gene_name": "MKK4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LUC3-1", "protein_name": "Mitogen-activated protein kinase 19", "gene_name": "MPK19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJG9-1", "protein_name": "Mitogen-activated protein kinase 20", "gene_name": "MPK20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7U9-1", "protein_name": "Mitogen-activated protein kinase kinase 2", "gene_name": "MKK2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39021-1", "protein_name": "Mitogen-activated protein kinase 1", "gene_name": "MPK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39022-1", "protein_name": "Mitogen-activated protein kinase 2", "gene_name": "MPK2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39023-1", "protein_name": "Mitogen-activated protein kinase 3", "gene_name": "MPK3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39026-1", "protein_name": "Mitogen-activated protein kinase 6", "gene_name": "MPK6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LPQ3-1", "protein_name": "Mitogen-activated protein kinase kinase 7", "gene_name": "MKK7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LM33-1", "protein_name": "Mitogen-activated protein kinase 8", "gene_name": "MPK8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LQQ9-1", "protein_name": "Mitogen-activated protein kinase 13", "gene_name": "MPK13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1Z5-1", "protein_name": "Mitogen-activated protein kinase 10", "gene_name": "MPK10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84M93-1", "protein_name": "Mitogen-activated protein kinase 17", "gene_name": "MPK17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39027-1", "protein_name": "Mitogen-activated protein kinase 7", "gene_name": "MPK7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94A06-1", "protein_name": "Mitogen-activated protein kinase kinase 1", "gene_name": "MEK1; MKK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RXG3-1", "protein_name": "Mitogen-activated protein kinase kinase 5", "gene_name": "MKK5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C5C0-1", "protein_name": "Mitogen-activated protein kinase 18", "gene_name": "MPK18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJV0-1", "protein_name": "Mitogen-activated protein kinase kinase 6", "gene_name": "MKK6", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M8J5", "url": "https://www.uniprot.org/uniprotkb/Q9M8J5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16537113", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 30 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Putative Arabidopsis THO/TREX mRNA export complex is involved in transgene and endogenous siRNA biosynthesis.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "2010", "authors": "Yelina Nataliya E, Smith Lisa M, Jones Alexandra M E, Patel Kanu, Kelly Krystyna A, Baulcombe David C", "reference": { "type": "PubMed", "id": "20634427", "url": "https://pubmed.ncbi.nlm.nih.gov/20634427" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M8T6-1", "protein_name": "THO complex subunit 7B", "gene_name": "THO7B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HRC1-1", "protein_name": "THO complex subunit 5A", "gene_name": "THO5A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K4J0-1", "protein_name": "THO complex subunit 5B", "gene_name": "THO5B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKT5-1", "protein_name": "THO complex subunit 3", "gene_name": "THO3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LDS5-1", "protein_name": "THO complex subunit 7A", "gene_name": "THO7A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L4M1-1", "protein_name": "THO complex subunit 6", "gene_name": "THO6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93VM9-1", "protein_name": "THO complex subunit 1", "gene_name": "THO1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IAT2-1", "protein_name": "THO complex subunit 2", "gene_name": "THO2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M8T6", "url": "https://www.uniprot.org/uniprotkb/Q9M8T6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 86, "end_pos": 86, "sequence_org": "S", "sequence_mut": "F", "comment": "In attex1-2; reduced levels of endogenous trans-acting small interfering RNA (ta-siRNA).", "evidence": [ { "database": "UniProtKB", "id": "Q9FKT5", "url": "https://www.uniprot.org/uniprotkb/Q9FKT5" }, { "database": "PubMed", "id": "20634427", "url": "https://pubmed.ncbi.nlm.nih.gov/20634427" } ], "uniprot_canonical_ac": "Q9FKT5-1" } ], "record_id": "pubmed.20634427", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 8 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Comparative analysis of JmjC domain-containing proteins reveals the potential histone demethylases in Arabidopsis and rice.", "journal": "J. Integr. Plant Biol.", "date": "2008", "authors": "Lu Falong, Li Guanglin, Cui Xia, Liu Chunyan, Wang Xiu-Jie, Cao Xiaofeng", "reference": { "type": "PubMed", "id": "18713399", "url": "https://pubmed.ncbi.nlm.nih.gov/18713399" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M9E8-1", "protein_name": "Lysine-specific demethylase JMJ21", "gene_name": "JMJ21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GUI6-1", "protein_name": "Lysine-specific demethylase JMJ14", "gene_name": "JMJ14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0SUU8-1", "protein_name": "Lysine-specific demethylase JMJ26", "gene_name": "JMJ26", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0SV12-1", "protein_name": "Lysine-specific demethylase JMJ29", "gene_name": "JMJ29", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L7T6-1", "protein_name": "Probable inactive lysine-specific demethylase JMJ19", "gene_name": "JMJ19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K2M8-1", "protein_name": "Lysine-specific demethylase JMJ31", "gene_name": "JMJ31", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RWR1-1", "protein_name": "Lysine-specific demethylase JMJ30", "gene_name": "JMJ30; JMJD5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VYB9-1", "protein_name": "Lysine-specific demethylase JMJ27", "gene_name": "JMJ27", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H1S7-1", "protein_name": "Lysine-specific demethylase JMJ28", "gene_name": "JMJ28", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64752-1", "protein_name": "Lysine-specific demethylase JMJ15", "gene_name": "JMJ15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WVR4-1", "protein_name": "Lysine-specific demethylase JMJ32", "gene_name": "JMJ32", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9STM3-1", "protein_name": "Lysine-specific demethylase REF6", "gene_name": "REF6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q67XX3-1", "protein_name": "Arginine-specific demethylase JMJ22", "gene_name": "JMJ22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q67ZB6-1", "protein_name": "Arginine-specific demethylase JMJ20", "gene_name": "JMJ20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6BDA0-1", "protein_name": "Lysine-specific demethylase ELF6", "gene_name": "ELF6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0SUT9-1", "protein_name": "Putative lysine-specific demethylase JMJ16", "gene_name": "JMJ16; PKDM7D", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I240-1", "protein_name": "Lysine-specific demethylase JMJ17", "gene_name": "JMJ17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HZD1-1", "protein_name": "E3 ubiquitin-protein ligase JMJ24", "gene_name": "JMJ24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I6G4-1", "protein_name": "Lysine-specific demethylase JMJ18", "gene_name": "JMJ18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4KIX0-1", "protein_name": "Lysine-specific demethylase JMJ13", "gene_name": "JMJ13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSE9-1", "protein_name": "Lysine-specific demethylase JMJ25", "gene_name": "IBM1; JMJ25", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M9E8", "url": "https://www.uniprot.org/uniprotkb/Q9M9E8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.18713399", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 21 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "RIP1 (ROP Interactive Partner 1)/ICR1 marks pollen germination sites and may act in the ROP1 pathway in the control of polarized pollen growth.", "journal": "Mol. Plant", "date": "2008", "authors": "Li Shundai, Gu Ying, Yan An, Lord Elizabeth, Yang Zhen-Biao", "reference": { "type": "PubMed", "id": "19825600", "url": "https://pubmed.ncbi.nlm.nih.gov/19825600" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M9F9-1", "protein_name": "Interactor of constitutive active ROPs 4", "gene_name": "ICR4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VYU8-1", "protein_name": "Interactor of constitutive active ROPs 5", "gene_name": "ICR5; RIP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LE98-1", "protein_name": "Interactor of constitutive active ROPs 1", "gene_name": "ICR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZQC5-1", "protein_name": "Interactor of constitutive active ROPs 2, chloroplastic", "gene_name": "ICR2; RIP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSS5-1", "protein_name": "Interactor of constitutive active ROPs 3", "gene_name": "ICR3; RIP5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P92978-1", "protein_name": "Rac-like GTP-binding protein ARAC11", "gene_name": "ARAC11", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M9F9", "url": "https://www.uniprot.org/uniprotkb/Q9M9F9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 340, "end_pos": 344, "sequence_org": "KKGQK", "sequence_mut": "", "comment": "No effect on interaction with ROPs but loss of plasma membrane localization.", "evidence": [ { "database": "UniProtKB", "id": "Q8LE98", "url": "https://www.uniprot.org/uniprotkb/Q8LE98" }, { "database": "PubMed", "id": "19825600", "url": "https://pubmed.ncbi.nlm.nih.gov/19825600" } ], "uniprot_canonical_ac": "Q8LE98-1" }, { "start_pos": 341, "end_pos": 341, "sequence_org": "K", "sequence_mut": "E", "comment": "Localization greatly shifted to the cytosol; when associated with E-344.", "evidence": [ { "database": "UniProtKB", "id": "Q8LE98", "url": "https://www.uniprot.org/uniprotkb/Q8LE98" }, { "database": "PubMed", "id": "19825600", "url": "https://pubmed.ncbi.nlm.nih.gov/19825600" } ], "uniprot_canonical_ac": "Q8LE98-1" }, { "start_pos": 344, "end_pos": 344, "sequence_org": "K", "sequence_mut": "E", "comment": "No effect on the plasma membrane localization, but decreased growth depolarization. Localization greatly shifted to the cytosol; when associated with E-341.", "evidence": [ { "database": "UniProtKB", "id": "Q8LE98", "url": "https://www.uniprot.org/uniprotkb/Q8LE98" }, { "database": "PubMed", "id": "19825600", "url": "https://pubmed.ncbi.nlm.nih.gov/19825600" } ], "uniprot_canonical_ac": "Q8LE98-1" } ], "record_id": "pubmed.19825600", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Isolation and characterization of a GCN5-interacting protein from Arabidopsis thaliana.", "journal": "Planta", "date": "2007-05", "authors": "Gao Ming-Jun, Hegedus Dwayne D, Sharpe Andrew G, Robinson Stephen J, Lydiate Derek J, Hannoufa Abdelali", "reference": { "type": "PubMed", "id": "17151888", "url": "https://pubmed.ncbi.nlm.nih.gov/17151888" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M9H3-1", "protein_name": "Embryogenesis-like protein", "gene_name": "EML", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9AR19-1", "protein_name": "Histone acetyltransferase GCN5", "gene_name": "HAG1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M9H3", "url": "https://www.uniprot.org/uniprotkb/Q9M9H3" } ], "common_name": "Mouse-ear cress", 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thaliana.", "journal": "Plant Physiol.", "date": "1997", "authors": "Titarenko E, Rojo E, Le\u00f3n J, S\u00e1nchez-Serrano J J", "reference": { "type": "PubMed", "id": "9342878", "url": "https://pubmed.ncbi.nlm.nih.gov/9342878" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M9H6-1", "protein_name": "Probable choline kinase 1", "gene_name": "CK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SK47-1", "protein_name": "Probable aminotransferase TAT3", "gene_name": "TAT3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04373-1", "protein_name": "IAA-amino acid hydrolase ILR1-like 4", "gene_name": "ILL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SUR6-1", "protein_name": "Cystine lyase CORI3", "gene_name": "CORI3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M9H6", "url": 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detected in cytoplasmic granules.", "journal": "Plant direct", "date": "2017-10", "authors": "Scarpin Mar\u00eda R, Sigaut Lorena, Temprana Silvio G, Boccaccio Graciela L, Pietrasanta L\u00eda I, Muschietti Jorge P", "reference": { "type": "PubMed", "id": "31245661", "url": "https://pubmed.ncbi.nlm.nih.gov/31245661" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M9S2-1", "protein_name": "Probable pectate lyase 3", "gene_name": "AT59", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SMW3-1", "protein_name": "Protein SKU5 SIMILAR 14", "gene_name": "SKS14", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M9S2", "url": "https://www.uniprot.org/uniprotkb/Q9M9S2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.31245661", "abstract": "", 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Biol.", "date": "1997", "authors": "Kulikauskas R, McCormick S", "reference": { "type": "PubMed", "id": "9278171", "url": "https://pubmed.ncbi.nlm.nih.gov/9278171" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M9S2-1", "protein_name": "Probable pectate lyase 3", "gene_name": "AT59", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q944R1-1", "protein_name": "Probable pectate lyase 15", "gene_name": "F18A5.100; F18A5_100", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q940Q1-1", "protein_name": "Probable pectate lyase 1", "gene_name": "T1G11.7; T1G11_6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C5M8-1", "protein_name": "Probable pectate lyase 18", "gene_name": "F22K18.20", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M9S2", "url": "https://www.uniprot.org/uniprotkb/Q9M9S2" } ], "common_name": "Mouse-ear 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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "IMPa-4, an Arabidopsis importin alpha isoform, is preferentially involved in agrobacterium-mediated plant transformation.", "journal": "The Plant cell", "date": "2008-10", "authors": "Bhattacharjee Saikat, Lee Lan-Ying, Oltmanns Heiko, Cao Hongbin, Veena , Cuperus Joshua, Gelvin Stanton B", "reference": { "type": "PubMed", "id": "18836040", "url": "https://pubmed.ncbi.nlm.nih.gov/18836040" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M9X7-1", "protein_name": "Importin subunit alpha-7", "gene_name": "IMPA7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJ92-1", "protein_name": "Importin subunit alpha-8", "gene_name": "IMPA8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96321-1", "protein_name": "Importin subunit alpha-1", "gene_name": "IMPA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4KF65-1", "protein_name": "Importin subunit alpha-9", "gene_name": "IMPA9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJ09-1", "protein_name": "Importin subunit alpha-5", "gene_name": "IMPA5", 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}, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cell-free protein production and labeling protocol for NMR-based structural proteomics.", "journal": "Nat. Methods", "date": "2004", "authors": "Vinarov Dmitriy A, Lytle Betsy L, Peterson Francis C, Tyler Ejan M, Volkman Brian F, Markley John L", "reference": { "type": "PubMed", "id": "15782178", "url": "https://pubmed.ncbi.nlm.nih.gov/15782178" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9MAB9-1", "protein_name": "Membrane-anchored ubiquitin-fold protein 1", "gene_name": "MUB1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9MAB9", "url": "https://www.uniprot.org/uniprotkb/Q9MAB9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15782178", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "MUBs, a family of ubiquitin-fold proteins that are plasma membrane-anchored by prenylation.", "journal": "The Journal of biological chemistry", "date": "2006", "authors": "Downes BP, Saracco SA, Lee SS, Crowell DN, Vierstra RD", "reference": { "type": "PubMed", "id": "16831869", "url": "https://pubmed.ncbi.nlm.nih.gov/16831869" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9MAB9-1", "protein_name": 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"uniprot_canonical_ac": "O95164-1", "protein_name": "Ubiquitin-like protein 3", "gene_name": "UBL3", "tax_name": "Human" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9MAB9", "url": "https://www.uniprot.org/uniprotkb/Q9MAB9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 114, "end_pos": 114, "sequence_org": "C", "sequence_mut": "S", "comment": "Loss of prenylation and membrane localization.", "evidence": [ { "database": "UniProtKB", "id": "Q9MAB9", "url": "https://www.uniprot.org/uniprotkb/Q9MAB9" }, { "database": "PubMed", "id": "16831869", "url": "https://pubmed.ncbi.nlm.nih.gov/16831869" } ], "uniprot_canonical_ac": "Q9MAB9-1" }, { "start_pos": 117, "end_pos": 117, "sequence_org": "C", "sequence_mut": "S", "comment": "Loss of prenylation and membrane localization.", "evidence": [ { "database": "UniProtKB", 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[] } ] }, { "title": "The ubiquitin-specific protease family from Arabidopsis. AtUBP1 and 2 are required for the resistance to the amino acid analog canavanine.", "journal": "Plant Physiol.", "date": "2000", "authors": "Yan N, Doelling J H, Falbel T G, Durski A M, Vierstra R D", "reference": { "type": "PubMed", "id": "11115897", "url": "https://pubmed.ncbi.nlm.nih.gov/11115897" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9MAQ3-1", "protein_name": "Putative ubiquitin carboxyl-terminal hydrolase 11", "gene_name": "UBP11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q67XW5-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 18", "gene_name": "UBP18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22207-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 5", "gene_name": "UBP5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O24454-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 3", "gene_name": "UBP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZSB5-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 10", "gene_name": "UBP10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W4N3-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 2", "gene_name": "UBP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LEW0-1", "protein_name": "Ubiquitin C-terminal hydrolase 22", "gene_name": "UBP22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKP5-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17", "gene_name": "UBP17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJA1-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 19", "gene_name": "UBP19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93Y01-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 9", "gene_name": "UBP9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C585-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 8", "gene_name": "UBP8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LAM0-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 4", "gene_name": "UBP4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84WU2-1", "protein_name": "Ubiquitin C-terminal hydrolase 13", "gene_name": "UBP13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L6Y1-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 14", "gene_name": "UBP14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q949Y0-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 6", "gene_name": "UBP6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FPT5-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 1", "gene_name": "UBP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SB51-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 16", "gene_name": "UBP16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FPS9-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 15", "gene_name": "UBP15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FPT1-1", "protein_name": "Ubiquitin C-terminal hydrolase 12", "gene_name": "UBP12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84WC6-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 7", "gene_name": "UBP7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIQ1-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 21", "gene_name": "UBP21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FPS0-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 27", "gene_name": "UBP27", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FPS2-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 25", "gene_name": "UBP25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FPS3-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 24", "gene_name": "UBP24", "tax_name": "Mouse-ear 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}, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Systematic analysis of SNARE molecules in Arabidopsis: dissection of the post-Golgi network in plant cells.", "journal": "Cell Struct. Funct.", "date": "2004", "authors": "Uemura Tomohiro, Ueda Takashi, Ohniwa Ryosuke L, Nakano Akihiko, Takeyasu Kunio, Sato Masa H", "reference": { "type": "PubMed", "id": "15342965", "url": "https://pubmed.ncbi.nlm.nih.gov/15342965" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9MAS5-1", "protein_name": "Putative vesicle-associated membrane protein 726", "gene_name": "VAMP726", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIQ9-1", "protein_name": "Vesicle-associated membrane protein 712", "gene_name": "VAMP712", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMR5-1", "protein_name": "Vesicle-associated membrane protein 714", "gene_name": "VAMP714", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZRD6-1", "protein_name": "VAMP-like protein YKT61", "gene_name": "YKT61", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M376-1", "protein_name": "Vesicle-associated membrane protein 727", "gene_name": "VAMP727", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VY69-1", "protein_name": "Vesicle-associated membrane protein 723", "gene_name": "VAMP723", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SEL6-1", "protein_name": "Vesicle transport v-SNARE 11", "gene_name": "VTI11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZSD4-1", "protein_name": "Syntaxin-121", "gene_name": "SYP121", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23429-1", "protein_name": "Vesicle-associated membrane protein 724", "gene_name": "VAMP724", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48850-1", "protein_name": "Vesicle-associated membrane protein 725", "gene_name": "VAMP725", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P47192-1", "protein_name": "Vesicle-associated membrane protein 722", "gene_name": "SAR1; VAMP722", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q946Y7-1", "protein_name": "Syntaxin-61", "gene_name": "SYP61", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O65359-1", "protein_name": "Tlg2p-like protein a", "gene_name": "SYP41", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SWH4-1", "protein_name": "Syntaxin-42", "gene_name": "SYP42", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49377-1", "protein_name": "Vesicle-associated membrane protein 711", "gene_name": "VAMP711", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LFP1-1", "protein_name": "Vesicle-associated membrane protein 713", "gene_name": "VAMP713", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LVP9-1", "protein_name": "Vesicle transport v-SNARE 13", "gene_name": "VTI13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SEL5-1", "protein_name": "Vesicle transport v-SNARE 12", "gene_name": "VTI12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SUJ1-1", "protein_name": "Syntaxin-43", "gene_name": "SYP43", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZTW3-1", "protein_name": "Vesicle-associated membrane protein 721", "gene_name": "VAMP721", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9MAS5", "url": "https://www.uniprot.org/uniprotkb/Q9MAS5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15342965", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 20 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Solution structure of At3g28950 from Arabidopsis thaliana.", "journal": "Proteins", "date": "2008", "authors": "de la Cruz Norberto B, Peterson Francis C, Volkman Brian F", "reference": { "type": "PubMed", "id": "18214976", "url": "https://pubmed.ncbi.nlm.nih.gov/18214976" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9MBH2-1", "protein_name": "Protein AIG2 B", "gene_name": "AIG2B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P54121-1", "protein_name": "Protein AIG2 A", "gene_name": "AIG2A; AIG2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A2RVS4-1", "protein_name": "AIG2-like protein C", "gene_name": "AIG2LC", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A8MRP2-1", "protein_name": "AIG2-like protein D", "gene_name": "AIG2LD", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9MBH1-1", "protein_name": "Protein AIG2 C", "gene_name": "AIG2C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIX2-1", "protein_name": "AIG2-like protein A", "gene_name": "AIG2LA; AIG2L", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIX1-1", "protein_name": "AIG2-like protein B", "gene_name": "AIG2LB", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9MBH2", "url": "https://www.uniprot.org/uniprotkb/Q9MBH2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.18214976", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Proteome map of the chloroplast lumen of Arabidopsis thaliana.", "journal": "J. Biol. Chem.", "date": "2002", "authors": "Schubert Maria, Petersson Ulrika A, Haas Brian J, Funk Christiane, Schr\u00f6der Wolfgang P, Kieselbach Thomas", "reference": { "type": "PubMed", "id": "11719511", "url": "https://pubmed.ncbi.nlm.nih.gov/11719511" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9S720-1", "protein_name": "PsbP domain-containing protein 3, chloroplastic", "gene_name": "PPD3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P82715-1", "protein_name": "PsbP domain-containing protein 5, chloroplastic", "gene_name": "PPD5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P82869-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic", "gene_name": "CYP37", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q41932-1", "protein_name": "Oxygen-evolving enhancer protein 3-2, chloroplastic", "gene_name": "PSBQ2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LYR5-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP19, chloroplastic", "gene_name": "FKBP19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXX5-1", "protein_name": "PsbP domain-containing protein 6, chloroplastic", "gene_name": "PPD6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P82658-1", "protein_name": "Thylakoid lumenal 19 kDa protein, chloroplastic", "gene_name": "TEL3S", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LVV5-1", "protein_name": "Thylakoid lumenal 15.0 kDa protein 2, chloroplastic", "gene_name": "MNB8_3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22609-1", "protein_name": "Protease Do-like 1, chloroplastic", "gene_name": "DEGP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81439-1", "protein_name": "Probable plastid-lipid-associated protein 1, chloroplastic", "gene_name": "PAP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P11490-1", "protein_name": "Plastocyanin minor isoform, chloroplastic", "gene_name": "PETE1; PETE", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22870-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP16-3, chloroplastic", "gene_name": "FKBP16-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O65220-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic", "gene_name": "CYP28", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4KHG6-1", "protein_name": "Carboxyl-terminal-processing peptidase 1, chloroplastic", "gene_name": "CTPA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23614-1", "protein_name": "Carboxyl-terminal-processing peptidase 2, chloroplastic", "gene_name": "CTPA2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49292-1", "protein_name": "PsbP domain-containing protein 4, chloroplastic", "gene_name": "PPD4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SW33-1", "protein_name": "Thylakoid lumenal 17.9 kDa protein, chloroplastic", "gene_name": "F13M23.70", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZVL6-1", "protein_name": "UPF0603 protein At1g54780, chloroplastic", "gene_name": "T22H22.19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22773-1", "protein_name": "Thylakoid lumenal 16.5 kDa protein, chloroplastic", "gene_name": "MPH2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22160-1", "protein_name": "Thylakoid lumenal 15 kDa protein 1, chloroplastic", "gene_name": "T13E15.7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P81760-1", "protein_name": "Thylakoid lumenal 17.4 kDa protein, chloroplastic", "gene_name": "TL17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XFT3-1", "protein_name": "Oxygen-evolving enhancer protein 3-1, chloroplastic", "gene_name": "PSBQ1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W593-1", "protein_name": "Probable lactoylglutathione lyase, chloroplastic", "gene_name": "F1N21.10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23403-1", "protein_name": "PsbP domain-containing protein 1, chloroplastic", "gene_name": "PPD1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82660-1", "protein_name": "Photosystem II stability/assembly factor HCF136, chloroplastic", "gene_name": "HCF136", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P34791-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic", "gene_name": "CYP20-3; ROC4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P23321-1", "protein_name": "Oxygen-evolving enhancer protein 1-1, chloroplastic", "gene_name": "PSBO1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P42699-1", "protein_name": "Plastocyanin major isoform, chloroplastic", "gene_name": "DRT112", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCY2-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic", "gene_name": "FKBP13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ASS6-1", "protein_name": "Photosynthetic NDH subunit of lumenal location 5, chloroplastic", "gene_name": "PNSL5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJU4-1", "protein_name": "Fructose-bisphosphate aldolase 1, chloroplastic", "gene_name": "FBA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LM71-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic", "gene_name": "FKBP18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WRJ7-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic", "gene_name": "FKBP20-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P82281-1", "protein_name": "Thylakoid lumenal 29 kDa protein, chloroplastic", "gene_name": "TL29", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P82538-1", "protein_name": "PsbP-like protein 1, chloroplastic", "gene_name": "PPL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39249-1", "protein_name": "Violaxanthin de-epoxidase, chloroplastic", "gene_name": "VDE1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q42029-1", "protein_name": "Oxygen-evolving enhancer protein 2-1, chloroplastic", "gene_name": "PSBP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80860-1", "protein_name": "ATP-dependent zinc metalloprotease FTSH 2, chloroplastic", "gene_name": "FTSH2; VAR2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LU10-1", "protein_name": "Protease Do-like 8, chloroplastic", "gene_name": "DEG8; DEGP8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SEL7-1", "protein_name": "Protease Do-like 5, chloroplastic", "gene_name": "DEG5; DEGP5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S841-1", "protein_name": "Oxygen-evolving enhancer protein 1-2, chloroplastic", "gene_name": "PSBO2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSA5-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic", "gene_name": "CYP38", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9S720", "url": "https://www.uniprot.org/uniprotkb/Q9S720" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11719511", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 42 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Retrograde plastid redox signals in the expression of nuclear genes for chloroplast proteins of Arabidopsis thaliana.", "journal": "J. Biol. Chem.", "date": "2005", "authors": "Fey Vidal, Wagner Raik, Bra\u00fctigam Katharina, Wirtz Markus, Hell R\u00fcdiger, Dietzmann Angela, Leister Dario, Oelm\u00fcller Ralf, Pfannschmidt Thomas", "reference": { "type": "PubMed", "id": "15561727", "url": "https://pubmed.ncbi.nlm.nih.gov/15561727" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9S720-1", "protein_name": "PsbP domain-containing protein 3, chloroplastic", "gene_name": "PPD3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9S720", "url": "https://www.uniprot.org/uniprotkb/Q9S720" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15561727", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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"count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A new class of transcription factors mediates brassinosteroid-regulated gene expression in Arabidopsis.", "journal": "Cell", "date": "2005-01-28", "authors": "Yin Yanhai, Vafeados Dionne, Tao Yi, Yoshida Shigeo, Asami Tadao, Chory Joanne", "reference": { "type": "PubMed", "id": "15680330", "url": 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"uniprot_canonical_ac": "Q945L0-1", "protein_name": "Cytochrome c oxidase subunit 6b-2", "gene_name": "COX6B-2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9S7L9", "url": "https://www.uniprot.org/uniprotkb/Q9S7L9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11250078", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The gene for alternative oxidase-2 (AOX2) from Arabidopsis thaliana consists of five exons unlike other AOX genes and is transcribed at an early stage during germination.", "journal": "Genes Genet. Syst.", "date": "2001", "authors": "Saish D, Nakazono M, Lee K H, Tsutsumi N, Akita S, Hirai A", "reference": { "type": "PubMed", "id": "11434463", "url": "https://pubmed.ncbi.nlm.nih.gov/11434463" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9S7L9-1", "protein_name": "Cytochrome c oxidase subunit 6b-1", "gene_name": "COX6B-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22049-1", "protein_name": "Ubiquinol oxidase 2, mitochondrial", "gene_name": "AOX2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39219-1", "protein_name": "Ubiquinol oxidase 1a, mitochondrial", "gene_name": "AOX1A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22048-1", "protein_name": "Ubiquinol oxidase 1c, mitochondrial", "gene_name": "AOX1C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23913-1", "protein_name": "Ubiquinol oxidase 1b, mitochondrial", "gene_name": "AOX1B", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9S7L9", "url": "https://www.uniprot.org/uniprotkb/Q9S7L9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11434463", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular characterization of the Arabidopsis SBP-box genes.", "journal": "Gene", "date": "1999", "authors": "Cardon G, H\u00f6hmann S, Klein J, Nettesheim K, Saedler H, Huijser P", "reference": { "type": "PubMed", "id": "10524240", "url": "https://pubmed.ncbi.nlm.nih.gov/10524240" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9S7P5-1", "protein_name": "Squamosa promoter-binding-like protein 12", "gene_name": "SPL12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7A9-1", "protein_name": "Squamosa promoter-binding-like protein 4", "gene_name": "SPL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S9L0-1", "protein_name": "Squamosa promoter-binding-like protein 10", "gene_name": "SPL10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S758-1", "protein_name": "Squamosa promoter-binding-like protein 5", "gene_name": "SPL5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S840-1", "protein_name": "Squamosa promoter-binding-like protein 2", "gene_name": "SPL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q700C2-1", "protein_name": "Squamosa promoter-binding-like protein 16", "gene_name": "SPL16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S9G8-1", "protein_name": "Squamosa promoter-binding-like protein 7", "gene_name": "SPL7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GXL3-1", "protein_name": "Squamosa promoter-binding-like protein 8", "gene_name": "SPL8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RY95-1", "protein_name": "Squamosa promoter-binding-like protein 14", "gene_name": "SPL14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94JW8-1", "protein_name": "Squamosa promoter-binding-like protein 6", "gene_name": "SPL6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q700W2-1", "protein_name": "Squamosa promoter-binding-like protein 9", "gene_name": "SPL9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FZK0-1", "protein_name": "Squamosa promoter-binding-like protein 11", "gene_name": "SPL11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P93015-1", "protein_name": "Squamosa promoter-binding-like protein 3", "gene_name": "SPL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SMX9-1", "protein_name": "Squamosa promoter-binding-like protein 1", "gene_name": "SPL1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9S7P5", "url": "https://www.uniprot.org/uniprotkb/Q9S7P5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.10524240", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 14 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "An Arabidopsis SBP-domain fragment with a disrupted C-terminal zinc-binding site retains its tertiary structure.", "journal": "FEBS letters", "date": "2006-04-03", "authors": "Yamasaki Kazuhiko, Kigawa Takanori, Inoue Makoto, Yamasaki Tomoko, Yabuki Takashi, Aoki Masaaki, Seki Eiko, Matsuda Takayoshi, Tomo Yasuko, Terada Takaho, Shirouzu Mikako, Tanaka Akiko, Seki Motoaki, Shinozaki Kazuo, Yokoyama Shigeyuki", "reference": { "type": "PubMed", "id": "16554053", "url": "https://pubmed.ncbi.nlm.nih.gov/16554053" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9S7P5-1", "protein_name": "Squamosa promoter-binding-like protein 12", "gene_name": "SPL12", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9S7P5", "url": "https://www.uniprot.org/uniprotkb/Q9S7P5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16554053", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The pentatricopeptide repeat gene OTP43 is required for trans-splicing of the mitochondrial nad1 Intron 1 in Arabidopsis thaliana.", "journal": "The Plant cell", "date": "2007-10", "authors": "de Longevialle And\u00e9ol Falcon, Meyer Etienne H, Andr\u00e9s Charles, Taylor Nicolas L, Lurin Claire, Millar A Harvey, Small Ian D", "reference": { "type": "PubMed", "id": "17965268", "url": "https://pubmed.ncbi.nlm.nih.gov/17965268" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": 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J.", "date": "2001", "authors": "Franceschetti M, Hanfrey C, Scaramagli S, Torrigiani P, Bagni N, Burtin D, Michael A J", "reference": { "type": "PubMed", "id": "11139406", "url": "https://pubmed.ncbi.nlm.nih.gov/11139406" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9S7T9-1", "protein_name": "S-adenosylmethionine decarboxylase proenzyme 2", "gene_name": "SAMDC2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96286-1", "protein_name": "S-adenosylmethionine decarboxylase proenzyme 1", "gene_name": "SAMDC1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9S7T9", "url": "https://www.uniprot.org/uniprotkb/Q9S7T9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11139406", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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factor bHLH30", "gene_name": "BHLH30", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q58G01-1", "protein_name": "Transcription factor bHLH155", "gene_name": "BHLH155", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0C7P8-1", "protein_name": "Transcription factor EMB1444", "gene_name": "EMB1444", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ASX9-1", "protein_name": "Transcription factor bHLH144", "gene_name": "BHLH144", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XIN0-1", "protein_name": "Transcription factor LHW", "gene_name": "LHW", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q7XJU0-1", "protein_name": "Transcription factor bHLH157", "gene_name": "BHLH157; LHL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LS08-1", "protein_name": "Transcription factor AIG1", "gene_name": "BHLH32", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LEZ3-1", "protein_name": "Transcription factor BIM1", "gene_name": "BIM1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9S7Y1", "url": "https://www.uniprot.org/uniprotkb/Q9S7Y1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17626058", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 8 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis thaliana expresses multiple Golgi-localised nucleotide-sugar transporters related to GONST1.", "journal": "Molecular genetics and genomics : MGG", "date": "2004-11", "authors": "Handford M G, Sicilia F, Brandizzi F, Chung J H, Dupree P", "reference": { "type": "PubMed", "id": "15480787", "url": "https://pubmed.ncbi.nlm.nih.gov/15480787" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9S845-1", "protein_name": "GDP-mannose transporter GONST3", "gene_name": "GONST3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SFE9-1", "protein_name": "GDP-mannose transporter GONST5", "gene_name": "GONST5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84L09-1", "protein_name": "GDP-mannose transporter GONST2", "gene_name": "GONST2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84L08-1", "protein_name": "GDP-fucose transporter 1", "gene_name": "GFT1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9S845", "url": "https://www.uniprot.org/uniprotkb/Q9S845" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15480787", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Ionizing radiation-dependent gamma-H2AX focus formation requires ataxia telangiectasia mutated and ataxia telangiectasia mutated and Rad3-related.", "journal": "Mol. Biol. Cell", "date": "2005", "authors": "Friesner Joanna D, Liu Bo, Culligan Kevin, Britt Anne B", "reference": { "type": "PubMed", "id": "15772150", "url": "https://pubmed.ncbi.nlm.nih.gov/15772150" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9S9K7-1", "protein_name": "Probable histone H2AXb", "gene_name": "T22H22.12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKS4-1", "protein_name": "Serine/threonine-protein kinase ATR", "gene_name": "ATR", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04848-1", "protein_name": "Probable histone H2AXa", "gene_name": "F7G19.24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M3G7-1", "protein_name": "Serine/threonine-protein kinase ATM", "gene_name": "ATM", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9S9K7", "url": "https://www.uniprot.org/uniprotkb/Q9S9K7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15772150", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Comprehensive expression profile analysis of the Arabidopsis Hsp70 gene family.", "journal": "Plant Physiol.", "date": "2001", "authors": "Sung D Y, Vierling E, Guy C L", "reference": { "type": "PubMed", "id": "11402207", "url": "https://pubmed.ncbi.nlm.nih.gov/11402207" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9S9N1-1", "protein_name": "Heat shock 70 kDa protein 5", "gene_name": "HSP70-5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SKY8-1", "protein_name": "Heat shock 70 kDa protein 8", "gene_name": "HSP70-8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LDZ0-1", "protein_name": "Heat shock 70 kDa protein 10, mitochondrial", "gene_name": "HSP70-10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C7X7-1", "protein_name": "Heat shock 70 kDa protein 18", "gene_name": "HSP70-18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GUM2-1", "protein_name": "Heat shock 70 kDa protein 9, mitochondrial", "gene_name": "HSP70-9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H1B3-1", "protein_name": "Heat shock 70 kDa protein BIP3", "gene_name": "BIP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O65719-1", "protein_name": "Heat shock 70 kDa protein 3", "gene_name": "HSP70-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P22953-1", "protein_name": "Heat shock 70 kDa protein 1", "gene_name": "HSC70-1; HSP70-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P22954-1", "protein_name": "Heat shock 70 kDa protein 2", "gene_name": "HSP70-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LHA8-1", "protein_name": "Heat shock 70 kDa protein 4", "gene_name": "HSP70-4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LKR3-1", "protein_name": "Heat shock 70 kDa protein BIP1", "gene_name": "BIP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39043-1", "protein_name": "Heat shock 70 kDa protein BIP2", "gene_name": "BIP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTX9-1", "protein_name": "Heat shock 70 kDa protein 7, chloroplastic", "gene_name": "HSP70-7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9STW6-1", "protein_name": "Heat shock 70 kDa protein 6, chloroplastic", "gene_name": "HSP70-6", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9S9N1", "url": "https://www.uniprot.org/uniprotkb/Q9S9N1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11402207", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 14 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Genomic analysis of the Hsp70 superfamily in Arabidopsis thaliana.", "journal": "Cell Stress Chaperones", "date": "2001", "authors": "Lin B L, Wang J S, Liu H C, Chen R W, Meyer Y, Barakat A, Delseny M", "reference": { "type": "PubMed", "id": "11599561", "url": "https://pubmed.ncbi.nlm.nih.gov/11599561" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9S9N1-1", "protein_name": "Heat shock 70 kDa protein 5", "gene_name": "HSP70-5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SAB1-1", "protein_name": "Heat shock 70 kDa protein 16", "gene_name": "HSP70-16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SKY8-1", "protein_name": "Heat shock 70 kDa protein 8", "gene_name": "HSP70-8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LDZ0-1", "protein_name": "Heat shock 70 kDa protein 10, mitochondrial", "gene_name": "HSP70-10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JMJ1-1", "protein_name": "Heat shock 70 kDa protein 17", "gene_name": "HSP70-17; HSP70", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C7X7-1", "protein_name": "Heat shock 70 kDa protein 18", "gene_name": "HSP70-18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GUM2-1", "protein_name": "Heat shock 70 kDa protein 9, mitochondrial", "gene_name": "HSP70-9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H1B3-1", "protein_name": "Heat shock 70 kDa protein BIP3", "gene_name": "BIP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O65719-1", "protein_name": "Heat shock 70 kDa protein 3", "gene_name": "HSP70-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P22953-1", "protein_name": "Heat shock 70 kDa protein 1", "gene_name": "HSC70-1; HSP70-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P22954-1", "protein_name": "Heat shock 70 kDa protein 2", "gene_name": "HSP70-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LHA8-1", "protein_name": "Heat shock 70 kDa protein 4", "gene_name": "HSP70-4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LKR3-1", "protein_name": "Heat shock 70 kDa protein BIP1", "gene_name": "BIP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39043-1", "protein_name": "Heat shock 70 kDa protein BIP2", "gene_name": "BIP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HQD4-1", "protein_name": "Heat shock 70 kDa protein 15", "gene_name": "HSP70-15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTX9-1", "protein_name": "Heat shock 70 kDa protein 7, chloroplastic", "gene_name": "HSP70-7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7C0-1", "protein_name": "Heat shock 70 kDa protein 14", "gene_name": "HSP70-14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9STW6-1", "protein_name": "Heat shock 70 kDa protein 6, chloroplastic", "gene_name": "HSP70-6", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9S9N1", "url": "https://www.uniprot.org/uniprotkb/Q9S9N1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11599561", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 18 } ], "sort_fields": [ 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Virus induction of heat shock protein 70 reflects a general response to protein accumulation in the plant cytosol.", "journal": "Plant Physiol.", "date": "2005", "authors": "Aparicio Frederic, Thomas Carole L, Lederer Carsten, Niu Yan, Wang Daowen, Maule Andrew J", "reference": { "type": "PubMed", "id": "15805473", "url": "https://pubmed.ncbi.nlm.nih.gov/15805473" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9S9N1-1", "protein_name": "Heat shock 70 kDa protein 5", "gene_name": "HSP70-5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O65719-1", "protein_name": "Heat shock 70 kDa protein 3", "gene_name": "HSP70-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P22953-1", "protein_name": "Heat shock 70 kDa protein 1", "gene_name": "HSC70-1; HSP70-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P22954-1", "protein_name": "Heat shock 70 kDa protein 2", "gene_name": "HSP70-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LHA8-1", "protein_name": "Heat shock 70 kDa protein 4", "gene_name": "HSP70-4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9S9N1", "url": "https://www.uniprot.org/uniprotkb/Q9S9N1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15805473", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A member of a novel Arabidopsis thaliana gene family of candidate Mg2+ ion transporters complements a yeast mitochondrial group II intron-splicing mutant.", "journal": "Plant J.", "date": "2000", "authors": "Schock I, Gregan J, Steinhauser S, Schweyen R, Brennicke A, Knoop V", "reference": { "type": "PubMed", "id": "11115130", "url": "https://pubmed.ncbi.nlm.nih.gov/11115130" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9S9N4-1", "protein_name": "Magnesium transporter MRS2-1", "gene_name": "MRS2-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLG2-1", "protein_name": "Magnesium transporter MRS2-2", "gene_name": "MRS2-2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9S9N4", "url": "https://www.uniprot.org/uniprotkb/Q9S9N4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11115130", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A novel family of magnesium transport genes in Arabidopsis.", "journal": "Plant Cell", "date": "2001", "authors": "Li L, Tutone A F, Drummond R S, Gardner R C, Luan S", "reference": { "type": "PubMed", "id": "11752386", "url": "https://pubmed.ncbi.nlm.nih.gov/11752386" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9S9N4-1", "protein_name": "Magnesium transporter MRS2-1", "gene_name": "MRS2-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SAH0-1", "protein_name": "Magnesium transporter MRS2-10", "gene_name": "MRS2-10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q304A0-1", "protein_name": "Magnesium transporter MRS2-7", "gene_name": "MGT7; MRS2-7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1PE39-1", "protein_name": "Magnesium transporter MRS2-6, mitochondrial", "gene_name": "MRS2-6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZPR4-1", "protein_name": "Magnesium transporter MRS2-5", "gene_name": "MRS2-5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93ZD7-1", "protein_name": "Magnesium transporter MRS2-4", "gene_name": "MRS2-4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLG2-1", "protein_name": "Magnesium transporter MRS2-2", "gene_name": "MRS2-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJN2-1", "protein_name": "Magnesium transporter MRS2-3", "gene_name": "MRS2-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q058N4-1", "protein_name": "Magnesium transporter MRS2-11, chloroplastic", "gene_name": "MRS2-11", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9S9N4", "url": "https://www.uniprot.org/uniprotkb/Q9S9N4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11752386", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 9 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": 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"glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of a mouse protein whose homolog in Saccharomyces cerevisiae is a component of the CCR4 transcriptional regulatory complex.", "journal": "Molecular and cellular biology", "date": "1995-07", "authors": "Draper M P, Salvadore C, Denis C L", "reference": { "type": "PubMed", "id": "7791755", "url": "https://pubmed.ncbi.nlm.nih.gov/7791755" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9S9P2-1", "protein_name": "Probable CCR4-associated factor 1 homolog 2", "gene_name": "CAF1-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P39008-1", "protein_name": "Poly(A) ribonuclease POP2", "gene_name": "POP2", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q60809-1", "protein_name": "CCR4-NOT transcription complex subunit 7", "gene_name": "Cnot7", "tax_name": "Mouse" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9S9P2", "url": "https://www.uniprot.org/uniprotkb/Q9S9P2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.7791755", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { 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"total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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Notes", "date": "2008", "authors": "K\u00fcfner Isabell, Koch Wolfgang", "reference": { "type": "PubMed", "id": "18710496", "url": "https://pubmed.ncbi.nlm.nih.gov/18710496" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SA36-1", "protein_name": "Organic cation/carnitine transporter 6", "gene_name": "OCT6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SA38-1", "protein_name": "Organic cation/carnitine transporter 3", "gene_name": "OCT3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SAK7-1", "protein_name": "Organic cation/carnitine transporter 5", "gene_name": "OCT5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64515-1", "protein_name": "Organic cation/carnitine transporter 2", "gene_name": "OCT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LHQ6-1", "protein_name": "Organic cation/carnitine transporter 4", "gene_name": "OCT4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SA36", "url": "https://www.uniprot.org/uniprotkb/Q9SA36" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.18710496", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A new picture of cell wall protein dynamics in elongating cells of Arabidopsis thaliana: confirmed actors and newcomers.", "journal": "BMC Plant Biol.", "date": "2008", "authors": "Irshad Muhammad, Canut Herv\u00e9, Borderies Gis\u00e8le, Pont-Lezica Rafael, Jamet Elisabeth", "reference": { "type": "PubMed", "id": "18796151", "url": "https://pubmed.ncbi.nlm.nih.gov/18796151" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SA86-1", "protein_name": "Berberine bridge enzyme-like 9", "gene_name": "T5I8.16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZVA1-1", "protein_name": "EP1-like glycoprotein 1", "gene_name": "F9K20.13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LPC3-1", "protein_name": "Berberine bridge enzyme-like 1", "gene_name": "SEC1A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SUC6-1", "protein_name": "Berberine bridge enzyme-like 22", "gene_name": "FAD-OXR", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZVA2-1", "protein_name": "EP1-like glycoprotein 2", "gene_name": "F9K20.12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZVA4-1", "protein_name": "EP1-like glycoprotein 3", "gene_name": "F9K20.10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKV2-1", "protein_name": "Berberine bridge enzyme-like 23", "gene_name": "ATBBE23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FI25-1", "protein_name": "Berberine bridge enzyme-like 27", "gene_name": "MFC16.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZVA5-1", "protein_name": "EP1-like glycoprotein 4", "gene_name": "F9K20.9", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SA86", "url": "https://www.uniprot.org/uniprotkb/Q9SA86" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.18796151", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 9 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of AtALKBH1A and AtALKBH1D as DNA N6-adenine demethylases in Arabidopsis thaliana.", "journal": "Plant science : an international journal of experimental plant biology", "date": "2024-05", "authors": "Li Donghao, Du Juan, Gao Min, He Chongsheng", "reference": { "type": "PubMed", "id": "38432357", "url": "https://pubmed.ncbi.nlm.nih.gov/38432357" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SA98-1", "protein_name": "DNA N(6)-methyladenine demethylase ALKBH1A", "gene_name": "ALKBH1A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJH2-1", "protein_name": "DNA N(6)-methyladenine demethylase ALKBH1C", "gene_name": "ALKBH1C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4KAV2-1", "protein_name": "DNA N(6)-methyladenine demethylase ALKBH1D", "gene_name": "ALKBH1D", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JFR7-1", "protein_name": "Probable DNA N(6)-methyladenine demethylase ALKBH1B", "gene_name": "ALKBH1B", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SA98", "url": "https://www.uniprot.org/uniprotkb/Q9SA98" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.38432357", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of a novel group of putative Arabidopsis thaliana beta-(1,3)-galactosyltransferases.", "journal": "Plant Mol. Biol.", "date": "2008", "authors": "Qu Yongmei, Egelund Jack, Gilson Paul R, Houghton Fiona, Gleeson Paul A, Schultz Carolyn J, Bacic Antony", "reference": { "type": "PubMed", "id": "18548197", "url": "https://pubmed.ncbi.nlm.nih.gov/18548197" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SAA4-1", "protein_name": "Probable beta-1,3-galactosyltransferase 1", "gene_name": "B3GALT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q5XEZ1-1", "protein_name": "Hydroxyproline O-galactosyltransferase HPGT3", "gene_name": "HPGT3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A8MRC7-1", "protein_name": "Probable beta-1,3-galactosyltransferase 2", "gene_name": "B3GALT2; YUP8H12.22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ASW1-1", "protein_name": "Hydroxyproline O-galactosyltransferase GALT3", "gene_name": "GALT3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94A05-1", "protein_name": "Hydroxyproline O-galactosyltransferase HPGT2", "gene_name": "HPGT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L7M1-1", "protein_name": "Probable beta-1,3-galactosyltransferase 14", "gene_name": "B3GALT14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C809-1", "protein_name": "Probable beta-1,3-galactosyltransferase 8", "gene_name": "B3GALT8; UPEX1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LEJ9-1", "protein_name": "Probable beta-1,3-galactosyltransferase 4", "gene_name": "B3GALT4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q66GS2-1", "protein_name": "Probable beta-1,3-galactosyltransferase 12", "gene_name": "B3GALT12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GXG6-1", "protein_name": "Hydroxyproline O-galactosyltransferase GALT4", "gene_name": "GALT4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L7F9-1", "protein_name": "Beta-1,3-galactosyltransferase GALT1", "gene_name": "GALT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RX55-1", "protein_name": "Hydroxyproline O-galactosyltransferase GALT5", "gene_name": "GALT5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94F27-1", "protein_name": "Hydroxyproline O-galactosyltransferase HPGT1", "gene_name": "HPTG1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NQB7-1", "protein_name": "Beta-1,3-galactosyltransferase 7", "gene_name": "B3GALT7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LKA9-1", "protein_name": "Probable beta-1,3-galactosyltransferase 13", "gene_name": "B3GALT13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LM60-1", "protein_name": "Probable beta-1,3-galactosyltransferase 5", "gene_name": "B3GALT5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZV71-1", "protein_name": "Probable beta-1,3-galactosyltransferase 3", "gene_name": "B3GALT3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A7XDQ9-1", "protein_name": "Hydroxyproline O-galactosyltransferase GALT2", "gene_name": "GALT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LV16-1", "protein_name": "Hydroxyproline O-galactosyltransferase GALT6", "gene_name": "GALT6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9MAP8-1", "protein_name": "Beta-1,6-galactosyltransferase GALT31A", "gene_name": "GALT31A", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SAA4", "url": "https://www.uniprot.org/uniprotkb/Q9SAA4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.18548197", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 20 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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"n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Nuclear targeted AtS40 modulates senescence associated gene expression in Arabidopsis thaliana during natural development and in darkness.", "journal": "Plant Mol. Biol.", "date": "2010", "authors": "Fischer-Kilbienski Isabell, Miao Ying, Roitsch Thomas, Zschiesche Wiebke, Humbeck Klaus, Krupinska Karin", "reference": { "type": "PubMed", "id": "20238146", "url": "https://pubmed.ncbi.nlm.nih.gov/20238146" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SAA7-1", "protein_name": "Protein S40-5", "gene_name": "S40-5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SKN0-1", "protein_name": "Protein S40-4", "gene_name": "S40-4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38853-1", "protein_name": "Rhodanese-like domain-containing protein 15, chloroplastic", "gene_name": "SEN1; STR15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80698-1", "protein_name": "Protein S40-6", "gene_name": "S40-6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GX72-1", "protein_name": "Protein S40-3", "gene_name": "S40-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C7N7-1", "protein_name": "Protein S40-1", "gene_name": "S40-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FK78-1", "protein_name": "Protein S40-2", "gene_name": "S40-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LKA1-1", "protein_name": "Protein S40-7", "gene_name": "S40-7", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SAA7", "url": "https://www.uniprot.org/uniprotkb/Q9SAA7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.20238146", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 8 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Overexpression of an Arabidopsis magnesium transport gene, AtMGT1, in Nicotiana benthamiana confers Al tolerance.", "journal": "Journal of experimental botany", "date": "2006", "authors": "Deng Wei, Luo Keming, Li Demou, Zheng Xuelian, Wei Xiaoyang, Smith William, Thammina Chandra, Lu Litang, Li Yi, Pei Yan", "reference": { "type": "PubMed", "id": "17101715", "url": "https://pubmed.ncbi.nlm.nih.gov/17101715" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SAH0-1", "protein_name": "Magnesium transporter MRS2-10", "gene_name": "MRS2-10", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SAH0", "url": "https://www.uniprot.org/uniprotkb/Q9SAH0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17101715", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "COI1 affects myrosinase activity and controls the expression of two flower-specific myrosinase-binding protein homologues in Arabidopsis.", "journal": "Planta", "date": "2001", "authors": "Capella A N, Menossi M, Arruda P, Benedetti C E", "reference": { "type": "PubMed", "id": "11678272", "url": "https://pubmed.ncbi.nlm.nih.gov/11678272" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SAV0-1", "protein_name": "Myrosinase-binding protein 1", "gene_name": "MBP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SAV1-1", "protein_name": "Myrosinase-binding protein 2", "gene_name": "F-ATMBP; MBP2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SAV0", "url": "https://www.uniprot.org/uniprotkb/Q9SAV0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11678272", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Antagonistic jacalin-related lectins regulate the size of ER body-type beta-glucosidase complexes in Arabidopsis thaliana.", "journal": "Plant Cell Physiol.", "date": "2008", "authors": "Nagano Atsushi J, Fukao Yoichiro, Fujiwara Masayuki, Nishimura Mikio, Hara-Nishimura Ikuko", "reference": { "type": "PubMed", "id": "18467340", "url": "https://pubmed.ncbi.nlm.nih.gov/18467340" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SAV0-1", "protein_name": "Myrosinase-binding protein 1", "gene_name": "MBP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFW7-1", "protein_name": "Jacalin-related lectin 43", "gene_name": "JAL43; MBB18.7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTA7-1", "protein_name": "Jacalin-related lectin 47", "gene_name": "JAL47", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1A6-1", "protein_name": "Jacalin-related lectin 39", "gene_name": "JAL39", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1A9-1", "protein_name": "Jacalin-related lectin 37", "gene_name": "JAL37", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9MA49-1", "protein_name": "Jacalin-related lectin 2", "gene_name": "JAL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1H583-1", "protein_name": "GDSL esterase/lipase 22", "gene_name": "GLL22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I9R6-1", "protein_name": "Jacalin-related lectin 15", "gene_name": "JAL15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SAV1-1", "protein_name": "Myrosinase-binding protein 2", "gene_name": "F-ATMBP; MBP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LQ31-1", "protein_name": "Jacalin-related lectin 4", "gene_name": "JAL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LIF8-1", "protein_name": "Jacalin-related lectin 36", "gene_name": "JAL36", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LKR6-1", "protein_name": "Jacalin-related lectin 40", "gene_name": "JAL40", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTA8-1", "protein_name": "Jacalin-related lectin 46", "gene_name": "JAL46", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTY2-1", "protein_name": "Jacalin-related lectin 48", "gene_name": "JAL48", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSM3-1", "protein_name": "Jacalin-related lectin 19", "gene_name": "JAL19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04314-1", "protein_name": "PYK10-binding protein 1", "gene_name": "PBP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04316-1", "protein_name": "Thiohydroximate-O-sulfate sulfur/sulfate-lyase (nitrile-forming) NSP4", "gene_name": "NSP4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04318-1", "protein_name": "Thiohydroximate-O-sulfate sulfur/sulfate-lyase (nitrile-forming) NSP3", "gene_name": "NSP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FGC5-1", "protein_name": "Jacalin-related lectin 41", "gene_name": "JAL41", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SDM9-1", "protein_name": "Thiohydroximate-O-sulfate sulfur/sulfate-lyase (nitrile-forming) NSP1", "gene_name": "NSP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04309-1", "protein_name": "Jacalin-related lectin 35", "gene_name": "JAL35; JR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04313-1", "protein_name": "PYK10-binding protein 2", "gene_name": "PBP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1A7-1", "protein_name": "Jacalin-related lectin 38", "gene_name": "JAL38", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WMR0-1", "protein_name": "Jacalin-related lectin 12", "gene_name": "JAL12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GWI7-1", "protein_name": "Jacalin-related lectin 10", "gene_name": "JAL10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q5XF82-1", "protein_name": "Jacalin-related lectin 11", "gene_name": "JAL11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80737-1", "protein_name": "Jacalin-related lectin 18", "gene_name": "JAL18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S3F1-1", "protein_name": "Transcription factor NAI1", "gene_name": "NAI1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W4H8-1", "protein_name": "Inactive GDSL esterase/lipase-like protein 23", "gene_name": "GLL23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80948-1", "protein_name": "Jacalin-related lectin 23", "gene_name": "JAL23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04310-1", "protein_name": "Jacalin-related lectin 34", "gene_name": "JAL34", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04311-1", "protein_name": "Jacalin-related lectin 33", "gene_name": "JAL33", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04312-1", "protein_name": "Jacalin-related lectin 32", "gene_name": "JAL32", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80950-1", "protein_name": "Jacalin-related lectin 22", "gene_name": "JAL22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84X07-1", "protein_name": "Jacalin-related lectin 24", "gene_name": "JAL24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84X12-1", "protein_name": "Probable jacalin-related lectin 26", "gene_name": "JAL26", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFW6-1", "protein_name": "Jacalin-related lectin 44", "gene_name": "JAL44; MBB18.8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FGC4-1", "protein_name": "Jacalin-related lectin 42", "gene_name": "JAL42", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HQX1-1", "protein_name": "Jacalin-related lectin 3", "gene_name": "JAL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I837-1", "protein_name": "Jacalin-related lectin 14", "gene_name": "JAL14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IB94-1", "protein_name": "Jacalin-related lectin 8", "gene_name": "JAL8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IB95-1", "protein_name": "Jacalin-related lectin 9", "gene_name": "JAL9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80736-1", "protein_name": "Jacalin-related lectin 17", "gene_name": "JAL17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80998-1", "protein_name": "Jacalin-related lectin 20", "gene_name": "JAL20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22829-1", "protein_name": "Jacalin-related lectin 25", "gene_name": "JAL25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FNM2-1", "protein_name": "Jacalin-related lectin 45", "gene_name": "JAL45", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q7XA74-1", "protein_name": "Inactive GDSL esterase/lipase-like protein 25", "gene_name": "MVP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49326-1", "protein_name": "Thiohydroximate-O-sulfate sulfur/sulfate-lyase (nitrile-forming) NSP2", "gene_name": "NSP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80735-1", "protein_name": "Jacalin-related lectin 16", "gene_name": "JAL16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C525-1", "protein_name": "Beta-glucosidase 21", "gene_name": "BGLU21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8Y9-1", "protein_name": "Beta-glucosidase 22", "gene_name": "BGLU22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZU13-1", "protein_name": "Jacalin-related lectin 13", "gene_name": "JAL13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZU23-1", "protein_name": "Jacalin-related lectin 5", "gene_name": "JAL5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SE37-1", "protein_name": "Protein RESTRICTED TEV MOVEMENT 1", "gene_name": "RTM1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SR37-1", "protein_name": "Beta-glucosidase 23", "gene_name": "BGLU23", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SAV0", "url": "https://www.uniprot.org/uniprotkb/Q9SAV0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.18467340", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 55 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", 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"tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FGS5-1", "protein_name": "High-affinity nitrate transporter 3.1", "gene_name": "NRT3.1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SB67", "url": "https://www.uniprot.org/uniprotkb/Q9SB67" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16415212", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A shaker-like K(+) channel with weak rectification is expressed in both source and sink phloem tissues of Arabidopsis.", "journal": "Plant Cell", "date": "2000", "authors": "Lacombe B, Pilot G, Michard E, Gaymard F, Sentenac H, Thibaud J B", "reference": { "type": "PubMed", "id": "10852932", "url": "https://pubmed.ncbi.nlm.nih.gov/10852932" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SCX5-1", "protein_name": "Probable potassium channel AKT5", "gene_name": "AKT5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GXE6-1", "protein_name": "Potassium channel AKT6", "gene_name": "AKT6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38898-1", "protein_name": "Potassium channel AKT2/3", "gene_name": "3; AKT2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SCX5", "url": "https://www.uniprot.org/uniprotkb/Q9SCX5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.10852932", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis calmodulin-binding protein IQ67-domain 1 localizes to microtubules and interacts with kinesin light chain-related protein-1.", "journal": "J. Biol. Chem.", "date": "2013", "authors": "B\u00fcrstenbinder Katharina, Savchenko Tatyana, M\u00fcller Jens, Adamson Aaron W, Stamm Gina, Kwong Raymond, Zipp Brandon J, Dinesh Dhurvas Chandrasekaran, Abel Steffen", "reference": { "type": "PubMed", "id": "23204523", "url": "https://pubmed.ncbi.nlm.nih.gov/23204523" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SD11-1", "protein_name": "Protein IQ-DOMAIN 20", "gene_name": "IQD20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LII8-1", "protein_name": "Protein KINESIN LIGHT CHAIN-RELATED 2", "gene_name": "KLCR2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SF32-1", "protein_name": "Protein IQ-DOMAIN 1", "gene_name": "IQD1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DH97-1", "protein_name": "Calmodulin-2", "gene_name": "CAM2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S744-1", "protein_name": "Calmodulin-like protein 9", "gene_name": "CML9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23320-1", "protein_name": "Calmodulin-like protein 8", "gene_name": "CAM8; CML8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DH95-1", "protein_name": "Calmodulin-1", "gene_name": "CAM1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81629-1", "protein_name": "Protein KINESIN LIGHT CHAIN-RELATED 1", "gene_name": "KLCR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HSX9-1", "protein_name": "Protein KINESIN LIGHT CHAIN-RELATED 3", "gene_name": "KLCR3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SD11", "url": "https://www.uniprot.org/uniprotkb/Q9SD11" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.23204523", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 9 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The GATA family of transcription factors in Arabidopsis and rice.", "journal": "Plant Physiol.", "date": "2004", "authors": "Reyes Jos\u00e9 C, Muro-Pastor M Isabel, Florencio Francisco J", "reference": { "type": "PubMed", "id": "15084732", "url": "https://pubmed.ncbi.nlm.nih.gov/15084732" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SD38-1", "protein_name": "GATA transcription factor 6", "gene_name": "GATA6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P69781-1", "protein_name": "GATA transcription factor 12", "gene_name": "GATA12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LAU9-1", "protein_name": "GATA transcription factor 1", "gene_name": "GATA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZP4-1", "protein_name": "GATA transcription factor 10", "gene_name": "GATA10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LIB5-1", "protein_name": "GATA transcription factor 17", "gene_name": "GATA17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LT45-1", "protein_name": "GATA transcription factor 29", "gene_name": "GATA29", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LRH6-1", "protein_name": "GATA transcription factor 25", "gene_name": "GATA25; ZIM", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H1G0-1", "protein_name": "GATA transcription factor 28", "gene_name": "GATA28", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1U2-1", "protein_name": "GATA transcription factor 14", "gene_name": "GATA14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SKN6-1", "protein_name": "Putative GATA transcription factor 13", "gene_name": "GATA13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SV30-1", "protein_name": "GATA transcription factor 8", "gene_name": "GATA8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W4H1-1", "protein_name": "GATA transcription factor 26", "gene_name": "GATA26", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L4M6-1", "protein_name": "GATA transcription factor 3", "gene_name": "GATA3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LC59-1", "protein_name": "GATA transcription factor 23", "gene_name": "GATA23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LG10-1", "protein_name": "GATA transcription factor 15", "gene_name": "GATA15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49741-1", "protein_name": "GATA transcription factor 2", "gene_name": "GATA2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49743-1", "protein_name": "GATA transcription factor 4", "gene_name": "GATA4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O65515-1", "protein_name": "GATA transcription factor 7", "gene_name": "GATA7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82632-1", "protein_name": "GATA transcription factor 9", "gene_name": "GATA9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q5PP38-1", "protein_name": "GATA transcription factor 27", "gene_name": "GATA27", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6DBP8-1", "protein_name": "GATA transcription factor 11", "gene_name": "GATA11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJ10-1", "protein_name": "GATA transcription factor 16", "gene_name": "GATA16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GXL7-1", "protein_name": "GATA transcription factor 24", "gene_name": "GATA24; ZML1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LC79-1", "protein_name": "GATA transcription factor 18", "gene_name": "GATA18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6QPM2-1", "protein_name": "GATA transcription factor 19", "gene_name": "GATA19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FH57-1", "protein_name": "GATA transcription factor 5", "gene_name": "GATA5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q5HZ36-1", "protein_name": "GATA transcription factor 21", "gene_name": "GATA21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZPX0-1", "protein_name": "GATA transcription factor 20", "gene_name": "GATA20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZI6-1", "protein_name": "Putative GATA transcription factor 22", "gene_name": "GATA22", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SD38", "url": "https://www.uniprot.org/uniprotkb/Q9SD38" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15084732", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 29 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "REVERSION-TO-ETHYLENE SENSITIVITY1, a conserved gene that regulates ethylene receptor function in Arabidopsis.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "2006", "authors": "Resnick Josephine S, Wen Chi-Kuang, Shockey Jason A, Chang Caren", "reference": { "type": "PubMed", "id": "16682642", "url": "https://pubmed.ncbi.nlm.nih.gov/16682642" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SD42-1", "protein_name": "Protein RTE1-HOMOLOG", "gene_name": "RTH", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4ITL6-1", "protein_name": "Protein REVERSION-TO-ETHYLENE SENSITIVITY1", "gene_name": "RTE1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SD42", "url": "https://www.uniprot.org/uniprotkb/Q9SD42" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 161, "end_pos": 161, "sequence_org": "C", "sequence_mut": "Y", "comment": "Enhances ethylene sensitivity. Reduces ETR1 binding efficiency.", "evidence": [ { "database": "UniProtKB", "id": "F4ITL6", "url": "https://www.uniprot.org/uniprotkb/F4ITL6" }, { "database": "PubMed", "id": "16682642", "url": "https://pubmed.ncbi.nlm.nih.gov/16682642" }, { "database": "PubMed", "id": "20952388", "url": "https://pubmed.ncbi.nlm.nih.gov/20952388" } ], "uniprot_canonical_ac": "F4ITL6-1" } ], "record_id": "pubmed.16682642", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "PAT1, a new member of the GRAS family, is involved in phytochrome A signal transduction.", "journal": "Genes Dev.", "date": "2000", "authors": "Bolle C, Koncz C, Chua N H", "reference": { "type": "PubMed", "id": "10817761", "url": "https://pubmed.ncbi.nlm.nih.gov/10817761" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SDQ3-1", "protein_name": "Scarecrow-like protein 1", "gene_name": "SCL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LDL7-1", "protein_name": "Scarecrow-like transcription factor PAT1", "gene_name": "PAT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7H5-1", "protein_name": "Scarecrow-like protein 21", "gene_name": "SCL21", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SDQ3", "url": "https://www.uniprot.org/uniprotkb/Q9SDQ3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.10817761", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Sequence conservation from human to prokaryotes of Surf1, a protein involved in cytochrome c oxidase assembly, deficient in Leigh syndrome.", "journal": "FEBS Lett.", "date": "1999", "authors": "Poyau A, Buchet K, Godinot C", "reference": { "type": "PubMed", "id": "10622737", "url": "https://pubmed.ncbi.nlm.nih.gov/10622737" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SE51-1", "protein_name": "Surfeit locus protein 1", "gene_name": "SURF1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9U4F3-1", "protein_name": "SURF1-like protein", "gene_name": "Surf1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9QXU2-1", "protein_name": "Surfeit locus protein 1", "gene_name": "Surf1; Surf4", "tax_name": "Rat" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SE51", "url": "https://www.uniprot.org/uniprotkb/Q9SE51" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.10622737", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Expansion of the receptor-like kinase/Pelle gene family and receptor-like proteins in Arabidopsis.", "journal": "Plant Physiol.", "date": "2003", "authors": "Shiu Shin Han, Bleecker Anthony B", "reference": { "type": "PubMed", "id": "12805585", "url": "https://pubmed.ncbi.nlm.nih.gov/12805585" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SF12-1", "protein_name": "Inactive serine/threonine-protein kinase/endoribonuclease IRE1-like", "gene_name": "F26K24.16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3ECH2-1", "protein_name": "LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.8", "gene_name": "LRK10L-2.8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HQ20-1", "protein_name": "LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.5", "gene_name": "LRK10L-2.5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HQ17-1", "protein_name": "LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4", "gene_name": "LRK10L-1.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HQ23-1", "protein_name": "LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.7", "gene_name": "LRK10L-2.7; LRK10L2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HQ22-1", "protein_name": "LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4", "gene_name": "LRK10L-2.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4KA50-1", "protein_name": "LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.2", "gene_name": "LRK10L-2.2; MXA21.130", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I3V3-1", "protein_name": "LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.5", "gene_name": "LRK10L-1.5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4KA51-1", "protein_name": "LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.3", "gene_name": "LRK10L-2.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VYG0-1", "protein_name": "LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.3", "gene_name": "LRK10L-1.3; LRK10L3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZJ9-1", "protein_name": "Calmodulin-binding receptor-like cytoplasmic kinase 2", "gene_name": "CRCK2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C6K9-1", "protein_name": "LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1", "gene_name": "LRK10L-1.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FF31-1", "protein_name": "LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1", "gene_name": "LRK10L-2.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ASQ5-1", "protein_name": "Calmodulin-binding receptor-like cytoplasmic kinase 3", "gene_name": "CRCK3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93VJ2-1", "protein_name": "Serine/threonine-protein kinase/endoribonuclease IRE1b", "gene_name": "IRE1-1; IRE1B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0C5E2-1", "protein_name": "LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2", "gene_name": "BEE1; LRK10L-1.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C5S2-1", "protein_name": "Serine/threonine-protein kinase/endoribonuclease IRE1a", "gene_name": "IRE1A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIL7-1", "protein_name": "Calmodulin-binding receptor-like cytoplasmic kinase 1", "gene_name": "CRCK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "D7SFH9-1", "protein_name": "Protein SUPPRESSOR OF NPR1-1 CONSTITUTIVE 4", "gene_name": "LRK10L-2.6; SNC4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SF12", "url": "https://www.uniprot.org/uniprotkb/Q9SF12" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12805585", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 19 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The nucleus-encoded HCF107 gene of Arabidopsis provides a link between intercistronic RNA processing and the accumulation of translation-competent psbH transcripts in chloroplasts.", "journal": "The Plant cell", "date": "2001-09", "authors": "Felder S, Meierhoff K, Sane A P, Meurer J, Driemel C, Pl\u00fccken H, Klaff P, Stein B, Bechtold N, Westhoff P", "reference": { "type": "PubMed", "id": "11549768", "url": "https://pubmed.ncbi.nlm.nih.gov/11549768" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SF38-1", "protein_name": "Pentatricopeptide repeat-containing protein At3g09650, chloroplastic", "gene_name": "HCF152", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RWG2-1", "protein_name": "Protein high chlorophyll fluorescent 107", "gene_name": "HCF107", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SF38", "url": "https://www.uniprot.org/uniprotkb/Q9SF38" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11549768", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "HCF152, an Arabidopsis RNA binding pentatricopeptide repeat protein involved in the processing of chloroplast psbB-psbT-psbH-petB-petD RNAs.", "journal": "The Plant cell", "date": "2003-06", "authors": "Meierhoff Karin, Felder Susanne, Nakamura Takahiro, Bechtold Nicole, Schuster Gadi", "reference": { "type": "PubMed", "id": "12782738", "url": "https://pubmed.ncbi.nlm.nih.gov/12782738" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SF38-1", "protein_name": "Pentatricopeptide repeat-containing protein At3g09650, chloroplastic", "gene_name": "HCF152", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SF38", "url": "https://www.uniprot.org/uniprotkb/Q9SF38" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12782738", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The forkhead-associated domain 2 (FHA2) in Arabidopsis plays a role in plant fertility by regulating stamen development.", "journal": "Planta", "date": "2013-04", "authors": "Ahn Eu-Ree, Cho Hui-Kyung, Pai Hyun-Sook", "reference": { "type": "PubMed", "id": "23192389", "url": "https://pubmed.ncbi.nlm.nih.gov/23192389" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SFV6-1", "protein_name": "FHA domain-containing protein FHA1", "gene_name": 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Integr. Genomics", "date": "2008", "authors": "Roberts Thomas H, Hejgaard J\u00f8rn", "reference": { "type": "PubMed", "id": "18060440", "url": "https://pubmed.ncbi.nlm.nih.gov/18060440" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SH52-1", "protein_name": "Serpin-Z1", "gene_name": "F22C12.22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1T7-1", "protein_name": "Serpin-Z4", "gene_name": "T14D3.160", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIR9-1", "protein_name": "Serpin-Z10", "gene_name": "T22F11.17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZQR6-1", "protein_name": "Serpin-Z2", "gene_name": "T13P21.8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04582-1", "protein_name": "Probable non-inhibitory serpin-Z5", "gene_name": "F19K23.10; F19K23_10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48706-1", "protein_name": "Serpin-Z3", "gene_name": "T9J22.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7T8-1", "protein_name": "Serpin-ZX", "gene_name": "SERPIN1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SH52", "url": "https://www.uniprot.org/uniprotkb/Q9SH52" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.18060440", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", 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}, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Dirigent proteins in conifer defense II: Extended gene discovery, phylogeny, and constitutive and stress-induced gene expression in spruce (Picea spp.).", "journal": "Phytochemistry", "date": "2007", "authors": "Ralph Steven G, Jancsik Sharon, Bohlmann J\u00f6rg", "reference": { "type": "PubMed", "id": "17590394", "url": "https://pubmed.ncbi.nlm.nih.gov/17590394" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SH66-1", "protein_name": "Dirigent protein 5", "gene_name": "DIR5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIA8-1", "protein_name": "Dirigent protein 10", "gene_name": "DIR10; ESB1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LID5-1", "protein_name": "Dirigent protein 7", 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"Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SH66", "url": "https://www.uniprot.org/uniprotkb/Q9SH66" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17590394", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 25 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"DIR6", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SH66", "url": "https://www.uniprot.org/uniprotkb/Q9SH66" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.22854967", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "An unexpected plethora of trehalose biosynthesis genes in Arabidopsis thaliana.", "journal": "Trends Plant Sci.", "date": "2001", "authors": "Leyman B, Van Dijck P, Thevelein J M", "reference": { "type": "PubMed", "id": "11701378", "url": "https://pubmed.ncbi.nlm.nih.gov/11701378" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SHG0-1", "protein_name": "Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 3", "gene_name": "TPS3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T079-1", "protein_name": "Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 4", "gene_name": "TPS4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LMI0-1", "protein_name": "Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7", "gene_name": "TPS7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZV48-1", "protein_name": "Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11", "gene_name": "TPS11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WUI9-1", "protein_name": "Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8", "gene_name": "TPS8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23617-1", "protein_name": "Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5", "gene_name": "TPS5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94AH8-1", "protein_name": "Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6", "gene_name": "TPS6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FZ57-1", "protein_name": "Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2", "gene_name": "TPS2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LRA7-1", "protein_name": "Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9", "gene_name": "TPS9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYM4-1", "protein_name": "Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1", "gene_name": "TPS1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SHG0", "url": "https://www.uniprot.org/uniprotkb/Q9SHG0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11701378", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 10 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", 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"count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis phosphoglycerate dehydrogenase1 of the phosphoserine pathway is essential for development and required for ammonium assimilation and tryptophan biosynthesis.", "journal": "The Plant cell", "date": "2013-12", "authors": "Benstein Ruben Maximilian, Ludewig Katja, Wulfert Sabine, Wittek Sebastian, Gigolashvili Tamara, Frerigmann Henning, Gierth Markus, Fl\u00fcgge Ulf-Ingo, Krueger Stephan", "reference": { "type": "PubMed", "id": "24368794", "url": "https://pubmed.ncbi.nlm.nih.gov/24368794" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SHP0-1", "protein_name": "Phosphoserine aminotransferase 2, chloroplastic", "gene_name": "PSAT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04130-1", "protein_name": "D-3-phosphoglycerate dehydrogenase 2, chloroplastic", "gene_name": "PGDH2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96255-1", "protein_name": "Phosphoserine aminotransferase 1, chloroplastic", "gene_name": "PSAT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49485-1", "protein_name": "D-3-phosphoglycerate dehydrogenase 1, chloroplastic", "gene_name": "PGDH1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82796-1", "protein_name": "Phosphoserine phosphatase, chloroplastic", "gene_name": "PSP", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LT69-1", "protein_name": "D-3-phosphoglycerate dehydrogenase 3, chloroplastic", "gene_name": "PGDH3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SHP0", "url": "https://www.uniprot.org/uniprotkb/Q9SHP0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.24368794", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "GDSL family of serine esterases/lipases.", "journal": "Prog. Lipid Res.", "date": "2004", "authors": "Akoh CC, Lee GC, Liaw YC, Huang TH, Shaw JF", "reference": { "type": "PubMed", "id": "15522763", "url": "https://pubmed.ncbi.nlm.nih.gov/15522763" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SHP6-1", "protein_name": "GDSL esterase/lipase At1g28610", "gene_name": "F1K23.16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WUV7-1", "protein_name": "GDSL esterase/lipase EXL4", "gene_name": "EXL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1H583-1", "protein_name": "GDSL esterase/lipase 22", "gene_name": "GLL22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DI15-1", "protein_name": "GDSL esterase/lipase At1g59406", "gene_name": "T4M14.17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FM04-1", "protein_name": "GDSL esterase/lipase At5g62930", "gene_name": "MQB2.25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJ25-1", "protein_name": "GDSL esterase/lipase At5g41890", "gene_name": "K16L22.18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJ40-1", "protein_name": "GDSL esterase/lipase At5g45960", "gene_name": "K15I22.16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJ41-1", "protein_name": "GDSL esterase/lipase At5g45950", "gene_name": "K15I22.15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJ45-1", "protein_name": "GDSL esterase/lipase At5g45910", "gene_name": "K15I22.11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FK75-1", "protein_name": "GDSL esterase/lipase At5g45670", "gene_name": "MRA19.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMK6-1", "protein_name": "GDSL esterase/lipase At5g63170", "gene_name": "MDC12.14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJP1-1", "protein_name": "GDSL esterase/lipase 4", "gene_name": "GLIP4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FXB6-1", "protein_name": "GDSL esterase/lipase LIP-4", "gene_name": "LIP4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FXJ1-1", "protein_name": "GDSL esterase/lipase At1g28570", "gene_name": "F1K23.19; F1K23_19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZS8-1", "protein_name": "GDSL esterase/lipase At5g03600", "gene_name": "F17C15.20; F17C15_20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZC5-1", "protein_name": "GDSL esterase/lipase At5g03820", "gene_name": "MED24.12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZS9-1", "protein_name": "GDSL esterase/lipase At5g03590", "gene_name": "F17C15.10; F17C15_10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FNP2-1", "protein_name": "GDSL esterase/lipase At5g08460", "gene_name": "F8L15.13; MAH20.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FVV1-1", "protein_name": "GDSL esterase/lipase At1g71250", "gene_name": "F3I17.10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FYD3-1", "protein_name": "GDSL esterase/lipase At3g43570", "gene_name": "F22J12.10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LH73-1", "protein_name": "GDSL esterase/lipase At3g14820", "gene_name": "T21E2.10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LII9-1", "protein_name": "GDSL esterase/lipase At3g27950", "gene_name": "K24A2.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJP2-1", "protein_name": "GDSL esterase/lipase At3g14220", "gene_name": "MLE3.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LMJ3-1", "protein_name": "GDSL esterase/lipase At1g06990", "gene_name": "F10K1.29", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LMS5-1", "protein_name": "GDSL esterase/lipase At1g18120", "gene_name": "T10F20.12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LU14-1", "protein_name": "GDSL esterase/lipase APG", "gene_name": "APG", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LY84-1", "protein_name": "GDSL esterase/lipase At5g14450", "gene_name": "F18O22.240", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZB2-1", "protein_name": "GDSL esterase/lipase At5g03980", "gene_name": "F8F6.190", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZS7-1", "protein_name": "GDSL esterase/lipase At5g03610", "gene_name": "F17C15.30", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SF78-1", "protein_name": "GDSL esterase/lipase At1g71691", "gene_name": "F14O23.4; F14O23_4; F26A9.7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJA9-1", "protein_name": "GDSL esterase/lipase At2g24560", "gene_name": "F25P17.14; F25P17_14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M153-1", "protein_name": "GDSL esterase/lipase At4g01130", "gene_name": "F2N1.17; F2N1_17; IG002N01.17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M2R9-1", "protein_name": "GDSL esterase/lipase At3g50400", "gene_name": "F11C1.240", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9MAA1-1", "protein_name": "GDSL esterase/lipase At3g05180", "gene_name": "T12H1.15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SF94-1", "protein_name": "GDSL esterase/lipase At3g09930", "gene_name": "F8A24.1; T22K18.26", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIF3-1", "protein_name": "GDSL esterase/lipase At2g04020", "gene_name": "F3C11.13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIF5-1", "protein_name": "GDSL esterase/lipase At2g03980", "gene_name": "F3C11.9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIQ2-1", "protein_name": "GDSL esterase/lipase At2g31550", "gene_name": "T9H9.7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIQ3-1", "protein_name": "GDSL esterase/lipase At2g31540", "gene_name": "T9H9.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIZ6-1", "protein_name": "GDSL esterase/lipase At2g40250", "gene_name": "T07M07.13; T3G21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJB4-1", "protein_name": "GDSL esterase/lipase At2g04570", "gene_name": "T1O3.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRM5-1", "protein_name": "GDSL esterase/lipase CPRD49", "gene_name": "CPRD49", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSA7-1", "protein_name": "GDSL esterase/lipase 5", "gene_name": "GLIP5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVU5-1", "protein_name": "GDSL esterase/lipase At4g28780", "gene_name": "F16A16.110", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYF5-1", "protein_name": "GDSL esterase/lipase 3", "gene_name": "GLIP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9STM6-1", "protein_name": "GDSL esterase/lipase At3g48460", "gene_name": "T29H11.20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZW7-1", "protein_name": "GDSL esterase/lipase At4g30140", "gene_name": "F6G3.170", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WPI9-1", "protein_name": "GDSL esterase/lipase At3g53100", "gene_name": "T4D2.30", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NLP7-1", "protein_name": "GDSL esterase/lipase At3g62280", "gene_name": "T17J13.240", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q680C0-1", "protein_name": "GDSL esterase/lipase At4g10955", "gene_name": "F25I24.160; F25I24_160; F8M12.9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NMR9-1", "protein_name": "GDSL esterase/lipase At5g45920", "gene_name": "K15I22.12; K15I22_12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LFJ9-1", "protein_name": "GDSL esterase/lipase 7", "gene_name": "GLIP7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93YW8-1", "protein_name": "GDSL esterase/lipase At4g18970", "gene_name": "F13C5.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38894-1", "protein_name": "GDSL esterase/lipase At1g28670", "gene_name": "F1K23.13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3E7I6-1", "protein_name": "GDSL esterase/lipase At1g28650", "gene_name": "F1K23.13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3EAQ9-1", "protein_name": "GDSL esterase/lipase At3g43550", "gene_name": "T18D12.120", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3ECM4-1", "protein_name": "GDSL esterase/lipase At1g58725", "gene_name": "R18I", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W4H8-1", "protein_name": "Inactive GDSL esterase/lipase-like protein 23", "gene_name": "GLL23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93X94-1", "protein_name": "GDSL esterase/lipase EXL6", "gene_name": "EXL6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C7N5-1", "protein_name": "GDSL esterase/lipase At1g29660", "gene_name": "F15D2.21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LIN2-1", "protein_name": "GDSL esterase/lipase At3g26430", "gene_name": "F20C19.19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M8Y5-1", "protein_name": "GDSL esterase/lipase LTL1", "gene_name": "LTL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C5N8-1", "protein_name": "GDSL esterase/lipase At1g54020", "gene_name": "F15I1.10; F15I1_10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94CH7-1", "protein_name": "GDSL esterase/lipase EXL2", "gene_name": "EXL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94CH5-1", "protein_name": "GDSL esterase/lipase EXL5", "gene_name": "EXL5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LB81-1", "protein_name": "GDSL esterase/lipase At5g33370", "gene_name": "F19N2.90", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94CH6-1", "protein_name": "GDSL esterase/lipase EXL3", "gene_name": "EXL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94CH8-1", "protein_name": "GDSL esterase/lipase EXL1", "gene_name": "EXL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94F40-1", "protein_name": "GDSL esterase/lipase At1g28600", "gene_name": "NEMP_A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3ECP6-1", "protein_name": "GDSL esterase/lipase At1g54790", "gene_name": "T22H22.20; T22H22_20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DKJ6-1", "protein_name": "GDSL esterase/lipase At1g20120", "gene_name": "T20H2.10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q5PNZ0-1", "protein_name": "GDSL esterase/lipase At5g18430", "gene_name": "F20L16.150", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q67ZI9-1", "protein_name": "GDSL esterase/lipase At2g42990", "gene_name": "F23E6.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L5Z1-1", "protein_name": "GDSL esterase/lipase At1g33811", "gene_name": "F14M2.7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RWJ4-1", "protein_name": "GDSL esterase/lipase At2g36325", "gene_name": "F2H17.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RXT9-1", "protein_name": "GDSL esterase/lipase At1g28590", "gene_name": "F1K23.17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VY93-1", "protein_name": "GDSL esterase/lipase At4g26790", "gene_name": "F10M23.130", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C7N4-1", "protein_name": "GDSL esterase/lipase At1g29670", "gene_name": "GDSL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHQ1-1", "protein_name": "GDSL esterase/lipase At5g37690", "gene_name": "K12B20.140; K12B20.17; K12B20_140", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C648-1", "protein_name": "GDSL esterase/lipase At1g58430", "gene_name": "F9K23.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C653-1", "protein_name": "GDSL esterase/lipase At1g58525", "gene_name": "F9K23.12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C996-1", "protein_name": "GDSL esterase/lipase 6", "gene_name": "GLIP6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9V0-1", "protein_name": "GDSL esterase/lipase At1g73610", "gene_name": "F25P22.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CA68-1", "protein_name": "GDSL esterase/lipase At1g74460", "gene_name": "F1M20.14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFC6-1", "protein_name": "GDSL esterase/lipase At5g22810", "gene_name": "MRN17.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHW9-1", "protein_name": "GDSL esterase/lipase At5g42170", "gene_name": "MJC20.27", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIA1-1", "protein_name": "GDSL esterase/lipase At5g55050", "gene_name": "K13P22.5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IBF0-1", "protein_name": "GDSL esterase/lipase At1g59030", "gene_name": "T4M14.19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64468-1", "protein_name": "GDSL esterase/lipase At2g19050", "gene_name": "T20K24.6; T20K24_6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O65921-1", "protein_name": "GDSL esterase/lipase At2g19010", "gene_name": "F19F24.4; T20K24.2; T20K24_2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22918-1", "protein_name": "GDSL esterase/lipase At2g30220", "gene_name": "T9D9.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22927-1", "protein_name": "GDSL esterase/lipase At2g30310", "gene_name": "T9D9.12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23469-1", "protein_name": "GDSL esterase/lipase At4g16220", "gene_name": "FCAALL.316; dl4150w", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23470-1", "protein_name": "GDSL esterase/lipase At4g16230", "gene_name": "FCAALL.318; dl4155w", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64469-1", "protein_name": "GDSL esterase/lipase At2g19060", "gene_name": "T20K24.7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80443-1", "protein_name": "GDSL esterase/lipase At2g38180", "gene_name": "F16M14.11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80470-1", "protein_name": "GDSL esterase/lipase At2g23540", "gene_name": "F26B6.19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80522-1", "protein_name": "GDSL esterase/lipase At1g09390", "gene_name": "F14J9.5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0C8Z7-1", "protein_name": "GDSL esterase/lipase At1g28640", "gene_name": "F1K23.25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q7XA74-1", "protein_name": "Inactive GDSL esterase/lipase-like protein 25", "gene_name": "MVP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLN0-1", "protein_name": "GDSL esterase/lipase 1", "gene_name": "GLIP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJG3-1", "protein_name": "GDSL esterase/lipase ESM1", "gene_name": "ESM1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C857-1", "protein_name": "GDSL esterase/lipase At1g31550", "gene_name": "F27M3.22; T8E3.19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFN0-1", "protein_name": "GDSL esterase/lipase At5g03810", "gene_name": "F8F6.20; MED24.11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FPE4-1", "protein_name": "GDSL esterase/lipase At1g28660", "gene_name": "F1K23.13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FXJ2-1", "protein_name": "GDSL esterase/lipase At1g28580", "gene_name": "F1K23.18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZQI3-1", "protein_name": "GDSL esterase/lipase At2g27360", "gene_name": "F12K2.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZUE4-1", "protein_name": "GDSL esterase/lipase At1g23500", "gene_name": "F28C11.13; F5O8.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYF0-1", "protein_name": "GDSL esterase/lipase 2", "gene_name": "GLIP2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SHP6", "url": "https://www.uniprot.org/uniprotkb/Q9SHP6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15522763", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 109 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Sequence analysis of GDSL lipase gene family in Arabidopsis thaliana.", "journal": "Pak. J. Biol. Sci.", "date": "2008", "authors": "Ling Hua", "reference": { "type": "PubMed", "id": "18819574", "url": "https://pubmed.ncbi.nlm.nih.gov/18819574" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SHP6-1", "protein_name": "GDSL esterase/lipase At1g28610", "gene_name": "F1K23.16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WUV7-1", "protein_name": "GDSL esterase/lipase EXL4", "gene_name": "EXL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1H583-1", "protein_name": "GDSL esterase/lipase 22", "gene_name": "GLL22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DI15-1", "protein_name": "GDSL esterase/lipase At1g59406", "gene_name": "T4M14.17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FM04-1", "protein_name": "GDSL esterase/lipase At5g62930", "gene_name": "MQB2.25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJ25-1", "protein_name": "GDSL esterase/lipase At5g41890", "gene_name": "K16L22.18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJ40-1", "protein_name": "GDSL esterase/lipase At5g45960", "gene_name": "K15I22.16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJ41-1", "protein_name": "GDSL esterase/lipase At5g45950", "gene_name": "K15I22.15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJ45-1", "protein_name": "GDSL esterase/lipase At5g45910", "gene_name": "K15I22.11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FK75-1", "protein_name": "GDSL esterase/lipase At5g45670", "gene_name": "MRA19.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMK6-1", "protein_name": "GDSL esterase/lipase At5g63170", "gene_name": "MDC12.14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJP1-1", "protein_name": "GDSL esterase/lipase 4", "gene_name": "GLIP4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FXB6-1", "protein_name": "GDSL esterase/lipase LIP-4", "gene_name": "LIP4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FXJ1-1", "protein_name": "GDSL esterase/lipase At1g28570", "gene_name": "F1K23.19; F1K23_19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZS8-1", "protein_name": "GDSL esterase/lipase At5g03600", "gene_name": "F17C15.20; F17C15_20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZC5-1", "protein_name": "GDSL esterase/lipase At5g03820", "gene_name": "MED24.12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZS9-1", "protein_name": "GDSL esterase/lipase At5g03590", "gene_name": "F17C15.10; F17C15_10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FNP2-1", "protein_name": "GDSL esterase/lipase At5g08460", "gene_name": "F8L15.13; MAH20.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FVV1-1", "protein_name": "GDSL esterase/lipase At1g71250", "gene_name": "F3I17.10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FYD3-1", "protein_name": "GDSL esterase/lipase At3g43570", "gene_name": "F22J12.10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LH73-1", "protein_name": "GDSL esterase/lipase At3g14820", "gene_name": "T21E2.10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LII9-1", "protein_name": "GDSL esterase/lipase At3g27950", "gene_name": "K24A2.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJP2-1", "protein_name": "GDSL esterase/lipase At3g14220", "gene_name": "MLE3.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LMJ3-1", "protein_name": "GDSL esterase/lipase At1g06990", "gene_name": "F10K1.29", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LMS5-1", "protein_name": "GDSL esterase/lipase At1g18120", "gene_name": "T10F20.12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LU14-1", "protein_name": "GDSL esterase/lipase APG", "gene_name": "APG", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LY84-1", "protein_name": "GDSL esterase/lipase At5g14450", "gene_name": "F18O22.240", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZB2-1", "protein_name": "GDSL esterase/lipase At5g03980", "gene_name": "F8F6.190", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZS7-1", "protein_name": "GDSL esterase/lipase At5g03610", "gene_name": "F17C15.30", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SF78-1", "protein_name": "GDSL esterase/lipase At1g71691", "gene_name": "F14O23.4; F14O23_4; F26A9.7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJA9-1", "protein_name": "GDSL esterase/lipase At2g24560", "gene_name": "F25P17.14; F25P17_14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M153-1", "protein_name": "GDSL esterase/lipase At4g01130", "gene_name": "F2N1.17; F2N1_17; IG002N01.17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M2R9-1", "protein_name": "GDSL esterase/lipase At3g50400", "gene_name": "F11C1.240", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9MAA1-1", "protein_name": "GDSL esterase/lipase At3g05180", "gene_name": "T12H1.15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SF94-1", "protein_name": "GDSL esterase/lipase At3g09930", "gene_name": "F8A24.1; T22K18.26", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIF3-1", "protein_name": "GDSL esterase/lipase At2g04020", "gene_name": "F3C11.13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIF5-1", "protein_name": "GDSL esterase/lipase At2g03980", "gene_name": "F3C11.9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIQ2-1", "protein_name": "GDSL esterase/lipase At2g31550", "gene_name": "T9H9.7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIQ3-1", "protein_name": "GDSL esterase/lipase At2g31540", "gene_name": "T9H9.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIZ6-1", "protein_name": "GDSL esterase/lipase At2g40250", "gene_name": "T07M07.13; T3G21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJB4-1", "protein_name": "GDSL esterase/lipase At2g04570", "gene_name": "T1O3.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRM5-1", "protein_name": "GDSL esterase/lipase CPRD49", "gene_name": "CPRD49", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSA7-1", "protein_name": "GDSL esterase/lipase 5", "gene_name": "GLIP5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVU5-1", "protein_name": "GDSL esterase/lipase At4g28780", "gene_name": "F16A16.110", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYF5-1", "protein_name": "GDSL esterase/lipase 3", "gene_name": "GLIP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9STM6-1", "protein_name": "GDSL esterase/lipase At3g48460", "gene_name": "T29H11.20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZW7-1", "protein_name": "GDSL esterase/lipase At4g30140", "gene_name": "F6G3.170", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WPI9-1", "protein_name": "GDSL esterase/lipase At3g53100", "gene_name": "T4D2.30", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NLP7-1", "protein_name": "GDSL esterase/lipase At3g62280", "gene_name": "T17J13.240", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q680C0-1", "protein_name": "GDSL esterase/lipase At4g10955", "gene_name": "F25I24.160; F25I24_160; F8M12.9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NMR9-1", "protein_name": "GDSL esterase/lipase At5g45920", "gene_name": "K15I22.12; K15I22_12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LFJ9-1", "protein_name": "GDSL esterase/lipase 7", "gene_name": "GLIP7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93YW8-1", "protein_name": "GDSL esterase/lipase At4g18970", "gene_name": "F13C5.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38894-1", "protein_name": "GDSL esterase/lipase At1g28670", "gene_name": "F1K23.13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3E7I6-1", "protein_name": "GDSL esterase/lipase At1g28650", "gene_name": "F1K23.13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3EAQ9-1", "protein_name": "GDSL esterase/lipase At3g43550", "gene_name": "T18D12.120", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3ECM4-1", "protein_name": "GDSL esterase/lipase At1g58725", "gene_name": "R18I", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W4H8-1", "protein_name": "Inactive GDSL esterase/lipase-like protein 23", "gene_name": "GLL23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93X94-1", "protein_name": "GDSL esterase/lipase EXL6", "gene_name": "EXL6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C7N5-1", "protein_name": "GDSL esterase/lipase At1g29660", "gene_name": "F15D2.21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LIN2-1", "protein_name": "GDSL esterase/lipase At3g26430", "gene_name": "F20C19.19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M8Y5-1", "protein_name": "GDSL esterase/lipase LTL1", "gene_name": "LTL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C5N8-1", "protein_name": "GDSL esterase/lipase At1g54020", "gene_name": "F15I1.10; F15I1_10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94CH7-1", "protein_name": "GDSL esterase/lipase EXL2", "gene_name": "EXL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94CH5-1", "protein_name": "GDSL esterase/lipase EXL5", "gene_name": "EXL5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LB81-1", "protein_name": "GDSL esterase/lipase At5g33370", "gene_name": "F19N2.90", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94CH6-1", "protein_name": "GDSL esterase/lipase EXL3", "gene_name": "EXL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94CH8-1", "protein_name": "GDSL esterase/lipase EXL1", "gene_name": "EXL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94F40-1", "protein_name": "GDSL esterase/lipase At1g28600", "gene_name": "NEMP_A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3ECP6-1", "protein_name": "GDSL esterase/lipase At1g54790", "gene_name": "T22H22.20; T22H22_20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DKJ6-1", "protein_name": "GDSL esterase/lipase At1g20120", "gene_name": "T20H2.10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q5PNZ0-1", "protein_name": "GDSL esterase/lipase At5g18430", "gene_name": "F20L16.150", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q67ZI9-1", "protein_name": "GDSL esterase/lipase At2g42990", "gene_name": "F23E6.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L5Z1-1", "protein_name": "GDSL esterase/lipase At1g33811", "gene_name": "F14M2.7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RWJ4-1", "protein_name": "GDSL esterase/lipase At2g36325", "gene_name": "F2H17.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RXT9-1", "protein_name": "GDSL esterase/lipase At1g28590", "gene_name": "F1K23.17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VY93-1", "protein_name": "GDSL esterase/lipase At4g26790", "gene_name": "F10M23.130", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C7N4-1", "protein_name": "GDSL esterase/lipase At1g29670", "gene_name": "GDSL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHQ1-1", "protein_name": "GDSL esterase/lipase At5g37690", "gene_name": "K12B20.140; K12B20.17; K12B20_140", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C648-1", "protein_name": "GDSL esterase/lipase At1g58430", "gene_name": "F9K23.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C653-1", "protein_name": "GDSL esterase/lipase At1g58525", "gene_name": "F9K23.12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C996-1", "protein_name": "GDSL esterase/lipase 6", "gene_name": "GLIP6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9V0-1", "protein_name": "GDSL esterase/lipase At1g73610", "gene_name": "F25P22.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CA68-1", "protein_name": "GDSL esterase/lipase At1g74460", "gene_name": "F1M20.14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFC6-1", "protein_name": "GDSL esterase/lipase At5g22810", "gene_name": "MRN17.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHW9-1", "protein_name": "GDSL esterase/lipase At5g42170", "gene_name": "MJC20.27", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIA1-1", "protein_name": "GDSL esterase/lipase At5g55050", "gene_name": "K13P22.5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IBF0-1", "protein_name": "GDSL esterase/lipase At1g59030", "gene_name": "T4M14.19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64468-1", "protein_name": "GDSL esterase/lipase At2g19050", "gene_name": "T20K24.6; T20K24_6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O65921-1", "protein_name": "GDSL esterase/lipase At2g19010", "gene_name": "F19F24.4; T20K24.2; T20K24_2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22918-1", "protein_name": "GDSL esterase/lipase At2g30220", "gene_name": "T9D9.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22927-1", "protein_name": "GDSL esterase/lipase At2g30310", "gene_name": "T9D9.12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23469-1", "protein_name": "GDSL esterase/lipase At4g16220", "gene_name": "FCAALL.316; dl4150w", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23470-1", "protein_name": "GDSL esterase/lipase At4g16230", "gene_name": "FCAALL.318; dl4155w", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64469-1", "protein_name": "GDSL esterase/lipase At2g19060", "gene_name": "T20K24.7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80443-1", "protein_name": "GDSL esterase/lipase At2g38180", "gene_name": "F16M14.11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80470-1", "protein_name": "GDSL esterase/lipase At2g23540", "gene_name": "F26B6.19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80522-1", "protein_name": "GDSL esterase/lipase At1g09390", "gene_name": "F14J9.5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0C8Z7-1", "protein_name": "GDSL esterase/lipase At1g28640", "gene_name": "F1K23.25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q7XA74-1", "protein_name": "Inactive GDSL esterase/lipase-like protein 25", "gene_name": "MVP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLN0-1", "protein_name": "GDSL esterase/lipase 1", "gene_name": "GLIP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJG3-1", "protein_name": "GDSL esterase/lipase ESM1", "gene_name": "ESM1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C857-1", "protein_name": "GDSL esterase/lipase At1g31550", "gene_name": "F27M3.22; T8E3.19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFN0-1", "protein_name": "GDSL esterase/lipase At5g03810", "gene_name": "F8F6.20; MED24.11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FPE4-1", "protein_name": "GDSL esterase/lipase At1g28660", "gene_name": "F1K23.13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FXJ2-1", "protein_name": "GDSL esterase/lipase At1g28580", "gene_name": "F1K23.18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZQI3-1", "protein_name": "GDSL esterase/lipase At2g27360", "gene_name": "F12K2.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZUE4-1", "protein_name": "GDSL esterase/lipase At1g23500", "gene_name": "F28C11.13; F5O8.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYF0-1", "protein_name": "GDSL esterase/lipase 2", "gene_name": "GLIP2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SHP6", "url": "https://www.uniprot.org/uniprotkb/Q9SHP6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.18819574", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 109 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Chloroplast and mitochondrial proteases in Arabidopsis. A proposed nomenclature.", "journal": "Plant Physiol.", "date": "2001", "authors": "Adam Z, Adamska I, Nakabayashi K, Ostersetzer O, Haussuhl K, Manuell A, Zheng B, Vallon O, Rodermel S R, Shinozaki K, Clarke A K", "reference": { "type": "PubMed", "id": "11299370", "url": "https://pubmed.ncbi.nlm.nih.gov/11299370" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SHZ0-1", "protein_name": "Protease Do-like 4, mitochondrial", "gene_name": "DEGP4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SHZ1-1", "protein_name": "Putative protease Do-like 3, mitochondrial", "gene_name": "DEGP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P56772-1", "protein_name": "Chloroplastic ATP-dependent Clp protease proteolytic subunit 1", "gene_name": "clpP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22609-1", "protein_name": "Protease Do-like 1, chloroplastic", "gene_name": "DEGP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RY22-1", "protein_name": "Protease Do-like 7", "gene_name": "DEG7; DEGP7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L770-1", "protein_name": "ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic", "gene_name": "CLPR3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIM2-1", "protein_name": "ATP-dependent zinc metalloprotease FTSH 9, chloroplastic", "gene_name": "FTSH9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SD67-1", "protein_name": "ATP-dependent zinc metalloprotease FTSH 7, chloroplastic", "gene_name": "FTSH7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K7F6-1", "protein_name": "CLP protease regulatory subunit CLPX2, mitochondrial", "gene_name": "CLPX2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XJ35-1", "protein_name": "ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic", "gene_name": "CLPR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XJ36-1", "protein_name": "ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic", "gene_name": "CLPR2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LB10-1", "protein_name": "ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic", "gene_name": "CLPR4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W585-1", "protein_name": "ATP-dependent zinc metalloprotease FTSH 8, chloroplastic", "gene_name": "FTSH8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FI56-1", "protein_name": "Chaperone protein ClpC1, chloroplastic", "gene_name": "CLPC1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80983-1", "protein_name": "ATP-dependent zinc metalloprotease FTSH 4, mitochondrial", "gene_name": "FTSH4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82261-1", "protein_name": "Protease Do-like 2, chloroplastic", "gene_name": "DEG2; DEGP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P42762-1", "protein_name": "Chaperone protein ClpD, chloroplastic", "gene_name": "CLPD", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94B60-1", "protein_name": "ATP-dependent Clp protease proteolytic subunit 4, chloroplastic", "gene_name": "CLPP4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FH02-1", "protein_name": "ATP-dependent zinc metalloprotease FTSH 5, chloroplastic", "gene_name": "FTSH5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FL12-1", "protein_name": "Protease Do-like 9", "gene_name": "DEGP9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FN42-1", "protein_name": "ATP-dependent Clp protease proteolytic subunit 2, mitochondrial", "gene_name": "CLPP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84WU8-1", "protein_name": "ATP-dependent zinc metalloprotease FTSH 3, mitochondrial", "gene_name": "FTSH3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C691-1", "protein_name": "Putative protease Do-like 6, chloroplastic", "gene_name": "DEGP6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIV6-1", "protein_name": "Protease Do-like 10, mitochondrial", "gene_name": "DEGP10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FK07-1", "protein_name": "CLP protease regulatory subunit CLPX1, mitochondrial", "gene_name": "CLPX1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FM41-1", "protein_name": "Putative protease Do-like 13", "gene_name": "DEGP13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LK70-1", "protein_name": "Putative protease Do-like 12, mitochondrial", "gene_name": "DEGP12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LK71-1", "protein_name": "Putative protease Do-like 11, mitochondrial", "gene_name": "DEGP11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1PDW5-1", "protein_name": "ATP-dependent zinc metalloprotease FTSH 6, chloroplastic", "gene_name": "FTSH6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39102-1", "protein_name": "ATP-dependent zinc metalloprotease FTSH 1, chloroplastic", "gene_name": "FTSH1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80860-1", "protein_name": "ATP-dependent zinc metalloprotease FTSH 2, chloroplastic", "gene_name": "FTSH2; VAR2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LU10-1", "protein_name": "Protease Do-like 8, chloroplastic", "gene_name": "DEG8; DEGP8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SEL7-1", "protein_name": "Protease Do-like 5, chloroplastic", "gene_name": "DEG5; DEGP5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SAA2-1", "protein_name": "ATP-dependent Clp protease proteolytic subunit 6, chloroplastic", "gene_name": "CLPP6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SXJ7-1", "protein_name": "Chaperone protein ClpC2, chloroplastic", "gene_name": "CLPC2; HSP93-III", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S834-1", "protein_name": "ATP-dependent Clp protease proteolytic subunit 5, chloroplastic", "gene_name": "CLPP5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SXJ6-1", "protein_name": "ATP-dependent Clp protease proteolytic subunit 3, chloroplastic", "gene_name": "CLPP3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SHZ0", "url": "https://www.uniprot.org/uniprotkb/Q9SHZ0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11299370", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 37 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Combined Experimental and Computational Approaches Reveal Distinct pH Dependence of Pectin Methylesterase Inhibitors.", "journal": "Plant physiology", "date": "2017-02", "authors": "Hocq Ludivine, S\u00e9n\u00e9chal Fabien, Lefebvre Val\u00e9rie, Lehner Arnaud, Domon Jean-Marc, Mollet Jean-Claude, Dehors J\u00e9r\u00e9my, Pageau Karine, Marcelo Paulo, Gu\u00e9rineau Fran\u00e7ois, Kol\u0161ek Katra, Mercadante Davide, Pelloux J\u00e9r\u00f4me", "reference": { "type": "PubMed", "id": "28034952", "url": "https://pubmed.ncbi.nlm.nih.gov/28034952" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SI72-1", "protein_name": "Pectinesterase inhibitor 9", "gene_name": "PMEI9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SB38-1", "protein_name": "Pectinesterase inhibitor 4", "gene_name": "PMEI4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49006-1", "protein_name": "Pectinesterase/pectinesterase inhibitor 3", "gene_name": "PME3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SI72", "url": "https://www.uniprot.org/uniprotkb/Q9SI72" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.28034952", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": 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Wormit Alexandra, Usadel Bjoern, Haughn George, Kermode Allison R", "reference": { "type": "PubMed", "id": "23129203", "url": "https://pubmed.ncbi.nlm.nih.gov/23129203" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SIC6-1", "protein_name": "Pectinesterase inhibitor 5", "gene_name": "PMEI5", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SIC6", "url": "https://www.uniprot.org/uniprotkb/Q9SIC6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.23129203", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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"count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Arabidopsis cyclophilin gene family.", "journal": "Plant Physiol.", "date": "2004", "authors": "Romano Patrick G N, Horton Peter, Gray Julie E", "reference": { "type": "PubMed", "id": "15051864", "url": "https://pubmed.ncbi.nlm.nih.gov/15051864" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SIH1-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP18-2", "gene_name": "CYP18-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P82869-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic", "gene_name": "CYP37", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38867-1", 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Biophys. Acta", "date": "2003", "authors": "Heazlewood Joshua L, Howell Katharine A, Millar A Harvey", "reference": { "type": "PubMed", "id": "12837548", "url": "https://pubmed.ncbi.nlm.nih.gov/12837548" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SIL6-1", "protein_name": "Prohibitin-6, mitochondrial", "gene_name": "PHB6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04331-1", "protein_name": "Prohibitin-3, mitochondrial", "gene_name": "PHB3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49460-1", "protein_name": "Prohibitin-1, mitochondrial", "gene_name": "PHB1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94AU7-1", "protein_name": "Gamma carbonic anhydrase 3, mitochondrial", "gene_name": "GAMMACA3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C6B3-1", "protein_name": "Gamma carbonic anhydrase 2, mitochondrial", "gene_name": "GAMMACA2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZNT7-1", "protein_name": "Prohibitin-2, mitochondrial", "gene_name": "PHB2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SIL6", "url": "https://www.uniprot.org/uniprotkb/Q9SIL6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12837548", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { 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"count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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Biol.", "date": "2001", "authors": "Gaspar Y, Johnson K L, McKenna J A, Bacic A, Schultz C J", "reference": { "type": "PubMed", "id": "11554470", "url": "https://pubmed.ncbi.nlm.nih.gov/11554470" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SIL7-1", "protein_name": "Fasciclin-like arabinogalactan protein 6", "gene_name": "FLA6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22126-1", "protein_name": "Fasciclin-like arabinogalactan protein 8", "gene_name": "FLA8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SU13-1", "protein_name": "Fasciclin-like arabinogalactan protein 2", "gene_name": "FLA2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZWA8-1", "protein_name": "Fasciclin-like arabinogalactan protein 9", "gene_name": "FLA9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FM65-1", "protein_name": "Fasciclin-like arabinogalactan protein 1", "gene_name": "FLA1", "tax_name": "Mouse-ear 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"The Arabidopsis genome. An abundance of soluble N-ethylmaleimide-sensitive factor adaptor protein receptors.", "journal": "Plant physiology", "date": "2000-12", "authors": "Sanderfoot A A, Assaad F F, Raikhel N V", "reference": { "type": "PubMed", "id": "11115874", "url": "https://pubmed.ncbi.nlm.nih.gov/11115874" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SIQ9-1", "protein_name": "Vesicle-associated membrane protein 712", "gene_name": "VAMP712", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMR5-1", "protein_name": "Vesicle-associated membrane protein 714", "gene_name": "VAMP714", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VY69-1", "protein_name": "Vesicle-associated membrane protein 723", "gene_name": "VAMP723", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23429-1", "protein_name": "Vesicle-associated membrane protein 724", "gene_name": "VAMP724", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48850-1", 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Takeyasu Kunio", "reference": { "type": "PubMed", "id": "15876431", "url": "https://pubmed.ncbi.nlm.nih.gov/15876431" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SIQ9-1", "protein_name": "Vesicle-associated membrane protein 712", "gene_name": "VAMP712", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49377-1", "protein_name": "Vesicle-associated membrane protein 711", "gene_name": "VAMP711", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LFP1-1", "protein_name": "Vesicle-associated membrane protein 713", "gene_name": "VAMP713", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SIQ9", "url": "https://www.uniprot.org/uniprotkb/Q9SIQ9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15876431", "abstract": "", "glycosylation": [], 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"gene_name": "ASP3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SJ52", "url": "https://www.uniprot.org/uniprotkb/Q9SJ52" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11230571", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 9 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Up-regulation of Arabidopsis thaliana NHL10 in the hypersensitive response to Cucumber mosaic virus infection and in senescing leaves is controlled by signalling pathways that differ in salicylate involvement.", "journal": "Planta", "date": "2004", "authors": "Zheng Ming Shu, Takahashi Hideki, Miyazaki Atsushi, Hamamoto Hiroshi, Shah Jyoti, Yamaguchi Isamu, Kusano Tomonobu", "reference": { "type": "PubMed", "id": "14666423", "url": "https://pubmed.ncbi.nlm.nih.gov/14666423" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SJ52-1", "protein_name": "NDR1/HIN1-like protein 10", "gene_name": "NHL10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJ54-1", "protein_name": "NDR1/HIN1-like protein 12", "gene_name": "NHL12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRN0-1", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Light-regulated hypocotyl elongation involves proteasome-dependent degradation of the microtubule regulatory protein WDL3 in Arabidopsis.", "journal": "Plant Cell", "date": "2013", "authors": "Liu Xiaomin, Qin Tao, Ma Qianqian, Sun Jingbo, Liu Ziqiang, Yuan Ming, Mao Tonglin", "reference": { "type": "PubMed", "id": "23653471", "url": "https://pubmed.ncbi.nlm.nih.gov/23653471" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SJ62-1", "protein_name": "Protein WVD2-like 4", "gene_name": "WDL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WSZ8-1", "protein_name": "Protein WVD2-like 6", "gene_name": "WDL6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94C48-1", "protein_name": "Protein WVD2-like 5", "gene_name": "WDL5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q67Y69-1", "protein_name": "Protein WVD2-like 7", "gene_name": "WDL7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ASW8-1", "protein_name": "Protein WVD2-like 2", "gene_name": "WDL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84WL6-1", "protein_name": "Protein WVD2-like 3", "gene_name": "WDL3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SJ62", "url": "https://www.uniprot.org/uniprotkb/Q9SJ62" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.23653471", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], 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"total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Purification, molecular cloning, and sequence analysis of sucrose-6F-phosphate phosphohydrolase from plants.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "2000", "authors": "Lunn J E, Ashton A R, Hatch M D, Heldt H W", "reference": { "type": "PubMed", "id": "11050182", "url": "https://pubmed.ncbi.nlm.nih.gov/11050182" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SJ66-1", "protein_name": "Probable sucrose-phosphatase 2", "gene_name": "SPP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93XN8-1", "protein_name": "Probable sucrose-phosphatase 3b", "gene_name": "SPP2; SPP3B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93WU4-1", "protein_name": "Probable sucrose-phosphatase 3a", "gene_name": "SPP3A", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SJ66", "url": "https://www.uniprot.org/uniprotkb/Q9SJ66" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11050182", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Sucrose-phosphatase gene families in plants.", "journal": "Gene", "date": "2003", "authors": "Lunn John E", "reference": { "type": "PubMed", "id": "12559580", "url": "https://pubmed.ncbi.nlm.nih.gov/12559580" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SJ66-1", "protein_name": "Probable sucrose-phosphatase 2", "gene_name": "SPP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93XN8-1", "protein_name": "Probable sucrose-phosphatase 3b", "gene_name": "SPP2; SPP3B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93WU4-1", "protein_name": "Probable sucrose-phosphatase 3a", "gene_name": "SPP3A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8J4-1", "protein_name": "Probable sucrose-phosphatase 1", "gene_name": "SPP1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SJ66", "url": "https://www.uniprot.org/uniprotkb/Q9SJ66" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12559580", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Comprehensive analysis of cytosolic nudix hydrolases in Arabidopsis thaliana.", "journal": "J. Biol. Chem.", "date": "2005", "authors": "Ogawa Takahisa, Ueda Yayoi, Yoshimura Kazuya, Shigeoka Shigeru", "reference": { "type": "PubMed", "id": "15878881", "url": "https://pubmed.ncbi.nlm.nih.gov/15878881" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SJC6-1", "protein_name": "Nudix hydrolase 5", "gene_name": "NUDT5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L831-1", "protein_name": "Nudix hydrolase 3", "gene_name": "NUDT3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94B74-1", "protein_name": "Nudix hydrolase 2", "gene_name": "NUDT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZU95-1", "protein_name": "Nudix hydrolase 17, mitochondrial", "gene_name": "NUDT17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L7W2-1", "protein_name": "Nudix hydrolase 8", "gene_name": "NUDT8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LE73-1", "protein_name": "Nudix hydrolase 4", "gene_name": "NUDT4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LHK1-1", "protein_name": "Nudix hydrolase 16, mitochondrial", "gene_name": "NUDT16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VYR2-1", "protein_name": "Nudix hydrolase 9", "gene_name": "NUDT9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VXZ0-1", "protein_name": "Nudix hydrolase 20, chloroplastic", "gene_name": "NUDT20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VY81-1", "protein_name": "Nudix hydrolase 21, chloroplastic", "gene_name": "NUDT21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93ZY7-1", "protein_name": "Nudix hydrolase 12, mitochondrial", "gene_name": "NUDT12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22951-1", "protein_name": "Nudix hydrolase 22, chloroplastic", "gene_name": "NUDT22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0C026-1", "protein_name": "Nudix hydrolase 24, chloroplastic", "gene_name": "NUDT24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LET2-1", "protein_name": "Nudix hydrolase 11", "gene_name": "NUDT11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GYB1-1", "protein_name": "Nudix hydrolase 15, mitochondrial", "gene_name": "NUDT15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94A82-1", "protein_name": "Nudix hydrolase 19, chloroplastic", "gene_name": "NUDT19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CA40-1", "protein_name": "Nudix hydrolase 1", "gene_name": "NUDT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LQU5-1", "protein_name": "Nudix hydrolase 18, mitochondrial", "gene_name": "NUDT18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P93740-1", "protein_name": "Nudix hydrolase 23, chloroplastic", "gene_name": "NUDT23; NUDX23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NPD7-1", "protein_name": "Nudix hydrolase 10", "gene_name": "NUDT10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q52K88-1", "protein_name": "Nudix hydrolase 13, mitochondrial", "gene_name": "NUDT13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SU14-1", "protein_name": "Nudix hydrolase 7", "gene_name": "NUDT7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJC4-1", "protein_name": "Nudix hydrolase 6", "gene_name": "NUDT6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZ63-1", "protein_name": "Nudix hydrolase 14, chloroplastic", "gene_name": "NUDT14", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SJC6", "url": "https://www.uniprot.org/uniprotkb/Q9SJC6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15878881", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 24 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": 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"uniprot_canonical_ac": "O80345-1", "protein_name": "Cyclin-dependent kinase F-1", "gene_name": "CDKF-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P24100-1", "protein_name": "Cyclin-dependent kinase A-1", "gene_name": "CDKA-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P25859-1", "protein_name": "Cyclin-dependent kinase B1-1", "gene_name": "CDKB1-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q67Y93-1", "protein_name": "Cyclin-dependent kinase inhibitor 1", "gene_name": "KRP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LF80-1", "protein_name": "Cyclin-dependent kinase B2-1", "gene_name": "CDKB2-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LG64-1", "protein_name": "Cyclin-dependent kinase B2-2", "gene_name": "CDKB2-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9M7-1", "protein_name": "Cyclin-dependent kinase D-2", "gene_name": "CDKD-2", "tax_name": "Mouse-ear cress" }, { 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"uniprot_canonical_ac": "Q2V419-1", "protein_name": "Cyclin-dependent kinase B1-2", "gene_name": "CDKB1-2; CDKB1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SJJ5", "url": "https://www.uniprot.org/uniprotkb/Q9SJJ5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11971144", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 21 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", 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"tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LPR5-1", "protein_name": "Transcription factor TCP4", "gene_name": "TCP4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93Z00-1", "protein_name": "Transcription factor TCP14", "gene_name": "TCP14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C518-1", "protein_name": "Transcription factor TCP8", "gene_name": "TCP8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C758-1", "protein_name": "Transcription factor TCP24", "gene_name": "TCP24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9L2-1", "protein_name": "Transcription factor TCP15", "gene_name": "TCP15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FME3-1", "protein_name": "Transcription factor TCP5", "gene_name": "TCP5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMX2-1", "protein_name": "Transcription factor TCP7", "gene_name": "TCP7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FTA2-1", "protein_name": "Transcription factor TCP21", "gene_name": "TCP21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LQF0-1", "protein_name": "Transcription factor TCP23", "gene_name": "TCP23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1U4-1", "protein_name": "Transcription factor TCP16", "gene_name": "TCP16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9MAH8-1", "protein_name": "Transcription factor TCP3", "gene_name": "TCP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7W5-1", "protein_name": "Transcription factor TCP13", "gene_name": "TCP13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0AQW4-1", "protein_name": "Transcription factor TCP12", "gene_name": "TCP12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FYG7-1", "protein_name": "Transcription factor TCP1", "gene_name": "TCP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C7G4-1", "protein_name": "Transcription factor TCP22", "gene_name": "TCP22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93V43-1", "protein_name": "Transcription factor TCP2", "gene_name": "TCP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LT89-1", "protein_name": "Transcription factor TCP19", "gene_name": "TCP19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSD5-1", "protein_name": "Transcription factor TCP20", "gene_name": "TCP20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLM6-1", "protein_name": "Transcription factor TCP6", "gene_name": "TCP6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LEZ9-1", "protein_name": "Transcription factor TCP17", "gene_name": "TCP17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A1YKT1-1", "protein_name": "Transcription factor TCP18", "gene_name": "BRC1; TCP18", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SJK7", "url": "https://www.uniprot.org/uniprotkb/Q9SJK7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17307924", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 24 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of a family of Arabidopsis genes related to xyloglucan fucosyltransferase1.", "journal": "Plant Physiol.", "date": "2001", "authors": "Sarria R, Wagner T A, O'Neill M A, Faik A, Wilkerson C G, Keegstra K, Raikhel N V", "reference": { "type": "PubMed", "id": "11743104", "url": "https://pubmed.ncbi.nlm.nih.gov/11743104" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SJP4-1", "protein_name": "Probable fucosyltransferase 5", "gene_name": "FUT5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJP6-1", "protein_name": "Putative fucosyltransferase 10", "gene_name": "FUT10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XI77-1", "protein_name": "Probable fucosyltransferase 9", "gene_name": "FUT9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XI78-1", "protein_name": "Probable fucosyltransferase 8", "gene_name": "FUT8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XI80-1", "protein_name": "Fucosyltransferase 6", "gene_name": "FUT6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XI81-1", "protein_name": "Probable fucosyltransferase 7", "gene_name": "FUT7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CA71-1", "protein_name": "Fucosyltransferase 3", "gene_name": "FUT3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJP2-1", "protein_name": "Probable fucosyltransferase 4", "gene_name": "FUT4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81053-1", "protein_name": "Fucosyltransferase 2", "gene_name": "FUT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SWH5-1", "protein_name": "Galactoside 2-alpha-L-fucosyltransferase", "gene_name": "FUT1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SJP4", "url": "https://www.uniprot.org/uniprotkb/Q9SJP4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11743104", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 10 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A conserved MYB transcription factor involved in phosphate starvation signaling both in vascular plants and in unicellular algae.", "journal": "Genes Dev.", "date": "2001", "authors": "Rubio V, Linhares F, Solano R, Mart\u00edn A C, Iglesias J, Leyva A, Paz-Ares J", "reference": { "type": "PubMed", "id": "11511543", "url": "https://pubmed.ncbi.nlm.nih.gov/11511543" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SJW0-1", "protein_name": "Myb family transcription factor PHL7", "gene_name": "PHL7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0SVS4-1", "protein_name": "Myb family transcription factor PHL11", "gene_name": "PHL11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I274-1", "protein_name": "Myb family transcription factor PHL8", "gene_name": "PHL8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VYI2-1", "protein_name": "Myb family transcription factor PHL12", "gene_name": "PHL12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q949U2-1", "protein_name": "Myb family transcription factor PHL6", "gene_name": "PHL6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J3P7-1", "protein_name": "Myb family transcription factor PHL13", "gene_name": "PHL13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WVU3-1", "protein_name": "Myb family transcription factor PHL5", "gene_name": "MPH15.16; PHL5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GUN5-1", "protein_name": "Protein PHR1-LIKE 1", "gene_name": "PHL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94A57-1", "protein_name": "Protein PHR1-LIKE 2", "gene_name": "PHL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94CL7-1", "protein_name": "Protein PHOSPHATE STARVATION RESPONSE 1", "gene_name": "PHR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GXC2-1", "protein_name": "Myb family transcription factor PHL4", "gene_name": "PHL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FK47-1", "protein_name": "Myb-related protein 1", "gene_name": "MYR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LAJ7-1", "protein_name": "Protein PHR1-LIKE 3", "gene_name": "PHL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SQQ9-1", "protein_name": "Myb-related protein 2", "gene_name": "MYR2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SAK5-1", "protein_name": "Myb family transcription factor APL", "gene_name": "APL", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SJW0", "url": "https://www.uniprot.org/uniprotkb/Q9SJW0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11511543", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 15 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Gene expression profiling of the tetrapyrrole metabolic pathway in Arabidopsis with a mini-array system.", "journal": "Plant Physiol.", "date": "2004", "authors": "Matsumoto Fuminori, Obayashi Takeshi, Sasaki-Sekimoto Yuko, Ohta Hiroyuki, Takamiya Ken-ichiro, Masuda Tatsuru", "reference": { "type": "PubMed", "id": "15326282", "url": "https://pubmed.ncbi.nlm.nih.gov/15326282" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SJX1-1", "protein_name": "Probable glutamyl-tRNA reductase 3, chloroplastic", "gene_name": "HEMA3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22886-1", "protein_name": "Uroporphyrinogen decarboxylase 2, chloroplastic", "gene_name": "HEME2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93ZB6-1", "protein_name": "Uroporphyrinogen decarboxylase 1, chloroplastic", "gene_name": "HEME1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q42606-1", "protein_name": "S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic", "gene_name": "UPM1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SJX1", "url": "https://www.uniprot.org/uniprotkb/Q9SJX1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15326282", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis membrane steroid binding protein 1 is involved in inhibition of cell elongation.", "journal": "Plant Cell", "date": "2005", "authors": "Yang Xiao-Hua, Xu Zhi-Hong, Xue Hong-Wei", "reference": { "type": "PubMed", "id": "15608331", "url": "https://pubmed.ncbi.nlm.nih.gov/15608331" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SK39-1", "protein_name": "Probable steroid-binding protein 3", "gene_name": "MP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XFM6-1", "protein_name": "Membrane steroid-binding protein 1", "gene_name": "MSBP1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SK39", "url": "https://www.uniprot.org/uniprotkb/Q9SK39" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15608331", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Hypothetical protein At2g24940.1 from Arabidopsis thaliana has a cytochrome b5 like fold.", "journal": "J. Biomol. NMR", "date": "2004", "authors": "Song Jikui, Vinarov Dmitriy, Tyler Ejan M, Shahan Mark N, Tyler Robert C, Markley John L", "reference": { "type": "PubMed", "id": "15702529", "url": "https://pubmed.ncbi.nlm.nih.gov/15702529" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SK39-1", "protein_name": "Probable steroid-binding protein 3", "gene_name": "MP3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SK39", "url": "https://www.uniprot.org/uniprotkb/Q9SK39" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15702529", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The role of JAR1 in Jasmonoyl-L: -isoleucine production during Arabidopsis wound response.", "journal": "Planta", "date": "2008", "authors": "Suza Walter P, Staswick Paul E", "reference": { "type": "PubMed", "id": "18247047", "url": "https://pubmed.ncbi.nlm.nih.gov/18247047" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9SK47-1", "protein_name": "Probable aminotransferase TAT3", "gene_name": "TAT3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SKE2-1", "protein_name": "Jasmonoyl--L-amino acid synthetase JAR1", "gene_name": "JAR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SUR6-1", "protein_name": "Cystine lyase CORI3", "gene_name": "CORI3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9SK47", "url": "https://www.uniprot.org/uniprotkb/Q9SK47" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.18247047", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], 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