[ { "title": "Purple acid phosphatases of Arabidopsis thaliana. Comparative analysis and differential regulation by phosphate deprivation.", "journal": "J. Biol. Chem.", "date": "2002", "authors": "Li Dongping, Zhu Huifen, Liu Kunfan, Liu Xin, Leggewie Georg, Udvardi Michael, Wang Daowen", "reference": { "type": "PubMed", "id": "12021284", "url": "https://pubmed.ncbi.nlm.nih.gov/12021284" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84LR6-1", "protein_name": "Probable inactive purple acid phosphatase 14", "gene_name": "PAP14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LU72-1", "protein_name": "Probable inactive purple acid phosphatase 28", "gene_name": "PAP28", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LX83-1", "protein_name": "Purple acid phosphatase 19", "gene_name": "PAP19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXI4-1", "protein_name": "Purple acid phosphatase 21", "gene_name": "PAP21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXI7-1", "protein_name": "Probable purple acid phosphatase 20", "gene_name": "PAP20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SR79-1", "protein_name": "Probable inactive purple acid phosphatase 16", "gene_name": "PAP16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SI18-1", "protein_name": "Purple acid phosphatase 11", "gene_name": "PAP11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38924-1", "protein_name": "Fe(3+)-Zn(2+) purple acid phosphatase 12", "gene_name": "PAP12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23244-1", "protein_name": "Purple acid phosphatase 25", "gene_name": "PAP25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48840-2", "protein_name": "Purple acid phosphatase 13", "gene_name": "PAP13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZQ81-1", "protein_name": "Probable inactive purple acid phosphatase 9", "gene_name": "PAP9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VYZ2-1", "protein_name": "Purple acid phosphatase 8", "gene_name": "PAP8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C927-1", "protein_name": "Purple acid phosphatase 5", "gene_name": "PAP5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIV9-1", "protein_name": "Purple acid phosphatase 10", "gene_name": "PAP10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H129-1", "protein_name": "Purple acid phosphatase 3", "gene_name": "PAP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H1R2-1", "protein_name": "Probable inactive purple acid phosphatase 24", "gene_name": "PAP24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VYU7-1", "protein_name": "Purple acid phosphatase 4", "gene_name": "PAP4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S340-1", "protein_name": "Purple acid phosphatase 22", "gene_name": "PAP22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S341-1", "protein_name": "Purple acid phosphatase 7", "gene_name": "PAP7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C510-1", "protein_name": "Purple acid phosphatase 6", "gene_name": "PAP6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q5MAU8-1", "protein_name": "Probable inactive purple acid phosphatase 27", "gene_name": "PAP27", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q949Y3-1", "protein_name": "Bifunctional purple acid phosphatase 26", "gene_name": "PAP26", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LMG7-1", "protein_name": "Probable inactive purple acid phosphatase 2", "gene_name": "PAP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6TPH1-1", "protein_name": "Purple acid phosphatase 23", "gene_name": "PAP23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMK9-1", "protein_name": "Probable inactive purple acid phosphatase 29", "gene_name": "PAP29", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJU7-1", "protein_name": "Purple acid phosphatase 18", "gene_name": "PAP18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LMX4-1", "protein_name": "Probable inactive purple acid phosphatase 1", "gene_name": "PAP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SFU3-1", "protein_name": "Purple acid phosphatase 15", "gene_name": "PAP15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCX8-1", "protein_name": "Purple acid phosphatase 17", "gene_name": "PAP17", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84LR6", "url": "https://www.uniprot.org/uniprotkb/Q84LR6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12021284", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 29 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Expression patterns of purple acid phosphatase genes in Arabidopsis organs and functional analysis of AtPAP23 predominantly transcribed in flower.", "journal": "Plant Mol. Biol.", "date": "2005", "authors": "Zhu Huifen, Qian Weiqiang, Lu Xuzhong, Li Dongping, Liu Xin, Liu Kunfan, Wang Daowen", "reference": { "type": "PubMed", "id": "16244908", "url": "https://pubmed.ncbi.nlm.nih.gov/16244908" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84LR6-1", "protein_name": "Probable inactive purple acid phosphatase 14", "gene_name": "PAP14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LU72-1", "protein_name": "Probable inactive purple acid phosphatase 28", "gene_name": "PAP28", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LX83-1", "protein_name": "Purple acid phosphatase 19", "gene_name": "PAP19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXI4-1", "protein_name": "Purple acid phosphatase 21", "gene_name": "PAP21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXI7-1", "protein_name": "Probable purple acid phosphatase 20", "gene_name": "PAP20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SR79-1", "protein_name": "Probable inactive purple acid phosphatase 16", "gene_name": "PAP16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SI18-1", "protein_name": "Purple acid phosphatase 11", "gene_name": "PAP11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38924-1", "protein_name": "Fe(3+)-Zn(2+) purple acid phosphatase 12", "gene_name": "PAP12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23244-1", "protein_name": "Purple acid phosphatase 25", "gene_name": "PAP25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48840-2", "protein_name": "Purple acid phosphatase 13", "gene_name": "PAP13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZQ81-1", "protein_name": "Probable inactive purple acid phosphatase 9", "gene_name": "PAP9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VYZ2-1", "protein_name": "Purple acid phosphatase 8", "gene_name": "PAP8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIV9-1", "protein_name": "Purple acid phosphatase 10", "gene_name": "PAP10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H129-1", "protein_name": "Purple acid phosphatase 3", "gene_name": "PAP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H1R2-1", "protein_name": "Probable inactive purple acid phosphatase 24", "gene_name": "PAP24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VYU7-1", "protein_name": "Purple acid phosphatase 4", "gene_name": "PAP4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S340-1", "protein_name": "Purple acid phosphatase 22", "gene_name": "PAP22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S341-1", "protein_name": "Purple acid phosphatase 7", "gene_name": "PAP7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C510-1", "protein_name": "Purple acid phosphatase 6", "gene_name": "PAP6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q5MAU8-1", "protein_name": "Probable inactive purple acid phosphatase 27", "gene_name": "PAP27", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q949Y3-1", "protein_name": "Bifunctional purple acid phosphatase 26", "gene_name": "PAP26", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LMG7-1", "protein_name": "Probable inactive purple acid phosphatase 2", "gene_name": "PAP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6TPH1-1", "protein_name": "Purple acid phosphatase 23", "gene_name": "PAP23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMK9-1", "protein_name": "Probable inactive purple acid phosphatase 29", "gene_name": "PAP29", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJU7-1", "protein_name": "Purple acid phosphatase 18", "gene_name": "PAP18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LMX4-1", "protein_name": "Probable inactive purple acid phosphatase 1", "gene_name": "PAP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SFU3-1", "protein_name": "Purple acid phosphatase 15", "gene_name": "PAP15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCX8-1", "protein_name": "Purple acid phosphatase 17", "gene_name": "PAP17", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84LR6", "url": "https://www.uniprot.org/uniprotkb/Q84LR6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16244908", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 28 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { 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"glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Genome analysis and functional characterization of the E2 and RING-type E3 ligase ubiquitination enzymes of Arabidopsis.", "journal": "Plant Physiol.", "date": "2005", "authors": "Kraft Edward, Stone Sophia L, Ma Lingeng, Su Ning, Gao Ying, Lau On-Sun, Deng Xing-Wang, Callis Judy", "reference": { "type": "PubMed", "id": "16339806", "url": "https://pubmed.ncbi.nlm.nih.gov/16339806" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GY87-1", "protein_name": "Probable ubiquitin-conjugating enzyme E2 26", "gene_name": "UBC26", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LUQ5-1", "protein_name": "Probable ubiquitin-conjugating enzyme E2 25", "gene_name": "UBC25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SLC3-1", "protein_name": "E3 ubiquitin-protein ligase ATL41", "gene_name": "ATL41", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SN27-1", "protein_name": "E3 ubiquitin-protein ligase ATL59", "gene_name": "ATL59", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q42541-1", "protein_name": "Ubiquitin-conjugating enzyme E2 13", "gene_name": "UBC13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P42749-1", "protein_name": "Ubiquitin-conjugating enzyme E2 5", "gene_name": "UBC5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P42750-1", "protein_name": "Ubiquitin-conjugating enzyme E2 6", "gene_name": "UBC6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P42748-1", "protein_name": 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"uniprot_canonical_ac": "P42743-1", "protein_name": "Ubiquitin-conjugating enzyme 15", "gene_name": "ATUBC2-1; UBC15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94F47-1", "protein_name": "Ubiquitin-conjugating enzyme E2 28", "gene_name": "UBC28", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FI61-1", "protein_name": "Ubiquitin-conjugating enzyme E2 27", "gene_name": "UBC27", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L7T3-1", "protein_name": "Ubiquitin-conjugating enzyme E2 20", "gene_name": "UBC20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L9W3-1", "protein_name": "E3 ubiquitin-protein ligase ATL23", "gene_name": "ATL23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FF66-1", "protein_name": "Ubiquitin-conjugating enzyme E2 22", "gene_name": "UBC22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKT3-1", "protein_name": "Ubiquitin-conjugating enzyme E2 30", "gene_name": "UBC30", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FK29-1", "protein_name": "Probable ubiquitin-conjugating enzyme E2 33", "gene_name": "UBC33", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SK92-1", "protein_name": "E3 ubiquitin-protein ligase ATL15", "gene_name": "ATL15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SLE4-1", "protein_name": "Ubiquitin-conjugating enzyme E2 29", "gene_name": "UBC29", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q941B6-1", "protein_name": "Probable ubiquitin-conjugating enzyme E2 37", "gene_name": "UBC37", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LBA0-1", "protein_name": "NEP1-interacting protein-like 2", "gene_name": "ATL24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23239-1", "protein_name": "Probable ubiquitin-conjugating enzyme E2 17", "gene_name": "UBC17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LGF7-1", "protein_name": "Ubiquitin-conjugating enzyme E2 PEX4", "gene_name": "PEX4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VY10-1", "protein_name": "Probable ubiquitin-conjugating enzyme E2 24", "gene_name": "UBC24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P35132-1", "protein_name": "SUMO-conjugating enzyme UBC9", "gene_name": "UBC9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P35133-1", "protein_name": "Ubiquitin-conjugating enzyme E2 10", "gene_name": "UBC10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P25865-1", "protein_name": "Ubiquitin-conjugating enzyme E2 1", "gene_name": "UBC1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P35131-1", "protein_name": "Ubiquitin-conjugating enzyme E2 8", "gene_name": "UBC8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FZ48-1", "protein_name": "Ubiquitin-conjugating enzyme E2 36", "gene_name": "UBC36", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJZ5-1", "protein_name": "Ubiquitin-conjugating enzyme E2 19", "gene_name": "UBC19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSP7-1", "protein_name": "Ubiquitin-conjugating enzyme E2 32", "gene_name": "UBC32", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8X7-1", "protein_name": "Probable ubiquitin-conjugating enzyme E2 31", "gene_name": "UBC31", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C918-1", "protein_name": "Putative ubiquitin-conjugating enzyme E2 38", "gene_name": "UBC38", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9Y7-1", "protein_name": "Probable ubiquitin-conjugating enzyme E2 12", "gene_name": "UBC12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMM0-1", "protein_name": "Probable ubiquitin-conjugating enzyme E2 18", "gene_name": "UBC18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FWT2-1", "protein_name": "Probable ubiquitin-conjugating enzyme E2 16", "gene_name": "UBC16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P42747-1", "protein_name": "Ubiquitin-conjugating enzyme E2 14", "gene_name": "UBC14", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GY87", "url": "https://www.uniprot.org/uniprotkb/Q8GY87" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16339806", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 42 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Phosphoproteomic analysis of seed maturation in Arabidopsis, rapeseed, and soybean.", "journal": "Plant physiology", "date": "2012-05", "authors": "Meyer Louis J, Gao Jianjiong, Xu Dong, Thelen Jay J", "reference": { "type": "PubMed", "id": "22440515", "url": "https://pubmed.ncbi.nlm.nih.gov/22440515" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GXX7-1", "protein_name": "Zinc finger CCCH domain-containing protein 33", "gene_name": "ZFN1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LEQ0-1", "protein_name": "Large ribosomal subunit protein P1y", "gene_name": "RPP1C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LVC9-1", "protein_name": "Large ribosomal subunit protein P3y", "gene_name": "P3B; RPP3B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LUK2-1", "protein_name": "Large ribosomal subunit protein P2v", "gene_name": "RPP2E", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXM8-1", "protein_name": "Large ribosomal subunit protein P2w", "gene_name": "RPP2D", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SB63-1", "protein_name": "Protein MODIFIER OF SNC1 1", "gene_name": "MOS1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SAA7-1", "protein_name": "Protein S40-5", "gene_name": "S40-5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C7X2-1", "protein_name": "HIT zinc finger and PAPA-1-like domain-containing protein", "gene_name": "F13N6.4; F13N6_4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LRX6-1", "protein_name": "Putative B3 domain-containing protein At3g24850", "gene_name": "K7P8.14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LVV6-1", "protein_name": "tRNA dimethylallyltransferase", "gene_name": "MNB8.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1S4-1", "protein_name": "Dentin sialophosphoprotein-like protein", "gene_name": "", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WQK2-1", "protein_name": "Probable protein S-acyltransferase 7", "gene_name": "PAT07", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LH85-1", "protein_name": "Large ribosomal subunit protein P2x", "gene_name": "RPP2C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLP2-1", "protein_name": "Uncharacterized protein", "gene_name": "MCO15.16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LFE4-1", "protein_name": "WEB family protein At5g16730, chloroplastic", "gene_name": "F5E19_70", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXE1-1", "protein_name": "B3 domain-containing protein REM23", "gene_name": "REM23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "B3H4P1-1", "protein_name": "Pentatricopeptide repeat-containing protein At5g66631", "gene_name": "MSN2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IDB4-1", "protein_name": "COP1-interacting protein-like protein", "gene_name": "T10D10.12; T10D10_12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JF82-1", "protein_name": "Ypt/Rab-GAP domain of gyp1p superfamily protein", "gene_name": "", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SA50-1", "protein_name": "Interactor of constitutive active ROPs protein", "gene_name": "NAIP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SKH9-1", "protein_name": "BSD domain-containing protein", "gene_name": "F15K19.2; F15K19_2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SL91-1", "protein_name": "Uncharacterized protein", "gene_name": "F3N11.17; F3N11_17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XI45-1", "protein_name": "Uncharacterized protein", "gene_name": "F9L1.18; F9L1_18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZU48-1", "protein_name": "Octicosapeptide/Phox/Bem1p family protein", "gene_name": "PDE331", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q03250-1", "protein_name": "Glycine-rich RNA-binding protein 7", "gene_name": "CCR2; RBG7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S791-1", "protein_name": "Uncharacterized protein", "gene_name": "F5A18.5; F5A18_5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96318-1", "protein_name": "12S seed storage protein CRC", "gene_name": "CRC; CRU3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K2F0-1", "protein_name": "Protein EMSY-LIKE 3", "gene_name": "EML3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94B78-1", "protein_name": "Glycine dehydrogenase (decarboxylating) 1, mitochondrial", "gene_name": "GLDP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVZ6-1", "protein_name": "Large ribosomal subunit protein P3z", "gene_name": "RPP3A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SW63-1", "protein_name": "Ethylene-responsive transcription factor RAP2-10", "gene_name": "RAP2-10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q67YS6-1", "protein_name": "Putative ALA-interacting subunit 2", "gene_name": "ALIS2; MCL19.21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04342-1", "protein_name": "Zinc finger CCCH domain protein", "gene_name": "MADA4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49570-1", "protein_name": "SUPPRESSOR-OF-WHITE-APRICOT/SURP RNA-binding domain containing protein 1", "gene_name": "SWAP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64632-1", "protein_name": "Coiled-coil protein", "gene_name": "F17K2.5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O65655-1", "protein_name": "SAP domain-containing protein", "gene_name": "T19P19.70; T19P19_70", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94KE2-1", "protein_name": "Protein TIME FOR COFFEE", "gene_name": "TIC", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VYN9-1", "protein_name": "Universal stress protein PHOS32", "gene_name": "PHOS32", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S9J8-1", "protein_name": "Probable clathrin assembly protein At4g32285", "gene_name": "F10M6.80", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VWF5-1", "protein_name": "Protein MEI2-like 5", "gene_name": "ML5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93Y23-1", "protein_name": "Flavin-containing monooxygenase FMO GS-OX4", "gene_name": "FMOGS-OX4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C500-1", "protein_name": "WPP domain-containing protein 2", "gene_name": "WPP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTK0-1", "protein_name": "Protein phosphatase inhibitor 2", "gene_name": "I-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMH6-1", "protein_name": "WPP domain-containing protein 1", "gene_name": "WPP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FW44-1", "protein_name": "Disease resistance protein ADR1", "gene_name": "ADR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LIN5-1", "protein_name": "Eukaryotic translation initiation factor 4B1", "gene_name": "EIF4B1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LNC6-1", "protein_name": "TOM1-like protein 2", "gene_name": "TOL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LS42-1", "protein_name": "Protein CASP", "gene_name": "CASP", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SLF7-1", "protein_name": "Large ribosomal subunit protein P2y", "gene_name": "RPP2B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SL76-1", "protein_name": "Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein", "gene_name": "T2G17.15; T2G17.16; T2G17_15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SHJ6-1", "protein_name": "Peroxisomal and mitochondrial division factor 2", "gene_name": "PMD2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T0D3-1", "protein_name": "Heat stress transcription factor B-2b", "gene_name": "HSFB2B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L4D8-1", "protein_name": "Protein IQ-DOMAIN 31", "gene_name": "IQD31", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RX66-1", "protein_name": "Serine/threonine-protein kinase Nek3", "gene_name": "NEK3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LCW9-1", "protein_name": "Large ribosomal subunit protein P1w", "gene_name": "RPP1A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93YR3-1", "protein_name": "FAM10 family protein At4g22670", "gene_name": "T12H17.60", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M4B5-1", "protein_name": "Prefoldin subunit 4", "gene_name": "PFD4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JPR7-1", "protein_name": "Plant UBX domain-containing protein 8", "gene_name": "PUX8; SAY1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04326-1", "protein_name": "Nuclear pore complex protein NUP35", "gene_name": "NUP35", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23095-1", "protein_name": "Large ribosomal subunit protein P1z", "gene_name": "RPP1B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23174-1", "protein_name": "Pre-mRNA-splicing factor SLU7-B", "gene_name": "SMP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82387-1", "protein_name": "DNA replication factor CDC6", "gene_name": "CDC6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NQK0-1", "protein_name": "TOM1-like protein 4", "gene_name": "TOL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P51407-1", "protein_name": "Large ribosomal subunit protein P2z", "gene_name": "RPP2A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84JM4-1", "protein_name": "Topless-related protein 3", "gene_name": "TPR3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C5G7-1", "protein_name": "Plant UBX domain-containing protein 13", "gene_name": "PUX13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C6S8-1", "protein_name": "Pre-mRNA-splicing factor of RES complex protein", "gene_name": "BUD13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9U8-1", "protein_name": "Probable calcium-binding protein CML26", "gene_name": "CML26", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1I9LMY1-1", "protein_name": "Cellulase (Glycosyl hydrolase family 5) protein", "gene_name": "", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1I9LPZ1-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZUL3-1", "protein_name": "Protein indeterminate-domain 5, chloroplastic", "gene_name": "IDD5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82487-1", "protein_name": "Phosphoenolpyruvate carboxylase family protein", "gene_name": "", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FG81-1", "protein_name": "Aluminum induced protein with YGL and LRDR motifs", "gene_name": "MQD19.19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FGF3-1", "protein_name": "Octicosapeptide/Phox/Bem1p family protein", "gene_name": "T12B11.2; T12B11_2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHP0-1", "protein_name": "BSD domain-containing protein", "gene_name": "K14B20.8; K14B20_8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FZG2-1", "protein_name": "Uncharacterized protein", "gene_name": "T2E6.7; T2E6_7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LIL3-1", "protein_name": "Aluminum induced protein with YGL and LRDR motifs", "gene_name": "", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJQ7-1", "protein_name": "Octicosapeptide/Phox/Bem1p family protein", "gene_name": "", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LPQ9-1", "protein_name": "Flowering time control protein FPA", "gene_name": "FPA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GW48-1", "protein_name": "Heat shock factor-binding protein", "gene_name": "HSBP", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H110-1", "protein_name": "Protein XAP5 CIRCADIAN TIMEKEEPER", "gene_name": "XCT", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H1F0-1", "protein_name": "bZIP transcription factor 29", "gene_name": "BZIP29", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FQ09-1", "protein_name": "ATP-dependent DNA helicase 2 subunit KU80", "gene_name": "KU80", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLP0-1", "protein_name": "65-kDa microtubule-associated protein 1", "gene_name": "MAP65-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q940X9-1", "protein_name": "La-related protein 1A", "gene_name": "LARP1A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O24646-1", "protein_name": "Transcription factor HY5", "gene_name": "HY5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81126-1", "protein_name": "Serine/arginine-rich splicing factor RSZ22", "gene_name": "RSZ22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81127-1", "protein_name": "Serine/arginine-rich splicing factor RSZ21", "gene_name": "RSZ21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81283-1", "protein_name": "Translocase of chloroplast 159, chloroplastic", "gene_name": "TOC159", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P43287-1", "protein_name": "Aquaporin PIP2-2", "gene_name": "PIP2-2; PIP2B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L8A5-1", "protein_name": "GRF1-interacting factor 1", "gene_name": "AN3; GIF1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SLG0-1", "protein_name": "Nuclear transcription factor Y subunit B-1", "gene_name": "NF-YB1; NFYB1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P10896-1", "protein_name": "Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic", "gene_name": "RCA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P15455-1", "protein_name": "12S seed storage protein CRA1", "gene_name": "CRA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82486-1", "protein_name": "N(6)-adenosine-methyltransferase MT-A70-like", "gene_name": "MTA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0CB22-1", "protein_name": "Histone-lysine N-methyltransferase ATX2", "gene_name": "ATX2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P15456-1", "protein_name": "12S seed storage protein CRB", "gene_name": "CRB", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P30302-1", "protein_name": "Aquaporin PIP2-3", "gene_name": "PIP2-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P43286-1", "protein_name": "Aquaporin PIP2-1", "gene_name": "PIP2-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C5J9-1", "protein_name": "Small GTPase LIP1", "gene_name": "LIP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJW5-1", "protein_name": "Mini zinc finger protein 2", "gene_name": "MIF2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9MA55-1", "protein_name": "Acyl-CoA-binding domain-containing protein 4", "gene_name": "ACBP4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJA6-1", "protein_name": "Serine/arginine-rich splicing factor RSZ22A", "gene_name": "RSZ22A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SL42-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase Pin1", "gene_name": "PIN1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96323-1", "protein_name": "Leucoanthocyanidin dioxygenase", "gene_name": "LDOX", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKP8-1", "protein_name": "Zinc-finger homeodomain protein 1", "gene_name": "ZHD1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMM3-1", "protein_name": "Protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1", "gene_name": "EXA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FVE6-1", "protein_name": "Histone deacetylase HDT1", "gene_name": "HDA3; HDT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1Z5-1", "protein_name": "Mitogen-activated protein kinase 10", "gene_name": "MPK10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SK67-1", "protein_name": "Ethylene-responsive transcription factor ERF120", "gene_name": "ERF120", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XII1-1", "protein_name": "Plastid division protein PDV2", "gene_name": "PDV2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q7XJK8-1", "protein_name": "MADS-box transcription factor PHERES 2", "gene_name": "PHE2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84WI4-1", "protein_name": "Protein transport protein SEC23 G", "gene_name": "SEC23G", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C829-1", "protein_name": "Nuclear pore complex protein NUP50A", "gene_name": "NUP50A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FXI5-1", "protein_name": "Protein IQ-DOMAIN 32", "gene_name": "IQD32", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LNQ1-1", "protein_name": "Mitochondrial import inner membrane translocase subunit TIM23-1", "gene_name": "TIM23-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZQC5-1", "protein_name": "Interactor of constitutive active ROPs 2, chloroplastic", "gene_name": "ICR2; RIP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LIG6-1", "protein_name": "NifU-like protein 4, mitochondrial", "gene_name": "NFU4; NIFU4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FI25-1", "protein_name": "Berberine bridge enzyme-like 27", "gene_name": "MFC16.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LF02-1", "protein_name": "RNA binding (RRM/RBD/RNP motifs) family protein", "gene_name": "ELF9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I983-1", "protein_name": "GYF domain-containing protein", "gene_name": "F3I6.24; F3I6_24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P46640-1", "protein_name": "Homeobox protein knotted-1-like 2", "gene_name": "KNAT2", 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Garcia V, Bai F, Hao Y, Luan S, Li L", "reference": { "type": "PubMed", "id": "24503647", "url": "https://pubmed.ncbi.nlm.nih.gov/24503647" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GUH7-1", "protein_name": "Hyperosmolality-gated Ca2+ permeable channel 2.3", "gene_name": "HYP1; OSCA2.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "B5TYT3-1", "protein_name": "Hyperosmolality-gated Ca2+ permeable channel 1.3", "gene_name": "OSCA1.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LVE4-1", "protein_name": "Hyperosmolality-gated Ca2+ permeable channel 1.5", "gene_name": "OSCA1.5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SY14-1", "protein_name": "Hyperosmolality-gated Ca2+ permeable channel 1.7", "gene_name": "OSCA1.7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZT4-1", "protein_name": "Hyperosmolality-gated Ca2+ permeable channel 4.1", "gene_name": "OSCA4.1", "tax_name": 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"Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GUH7", "url": "https://www.uniprot.org/uniprotkb/Q8GUH7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.24503647", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 17 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "OSCA/TMEM63 are an Evolutionarily Conserved Family of Mechanically Activated Ion Channels.", "journal": "eLife", "date": "2018", "authors": "Murthy SE, Dubin AE, Whitwam T, Jojoa-Cruz S, Cahalan SM, Mousavi SAR, Ward AB, Patapoutian A", "reference": { "type": "PubMed", "id": "30382938", "url": "https://pubmed.ncbi.nlm.nih.gov/30382938" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GUH7-1", "protein_name": "Hyperosmolality-gated Ca2+ permeable channel 2.3", "gene_name": "HYP1; OSCA2.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q91YT8-1", "protein_name": "Mechanosensitive cation channel TMEM63A", "gene_name": "Tmem63a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O94886-1", "protein_name": "Mechanosensitive cation channel TMEM63A", "gene_name": "TMEM63A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3TWI9-1", "protein_name": "Mechanosensitive cation channel TMEM63B", "gene_name": "Tmem63b", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9C8G5-1", "protein_name": "Hyperosmolality-gated Ca2+ permeable channel 3.1", "gene_name": "OSCA3.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NP91-1", "protein_name": "Mechanosensitive cation channel Tmem63", "gene_name": "Tmem63", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9FVQ5-1", "protein_name": "Hyperosmolality-gated Ca2+ permeable channel 1.8", "gene_name": "OSCA1.8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q5XEZ5-1", "protein_name": "Hyperosmolality-gated Ca2+ permeable channel 1.2", "gene_name": "OSCA1.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XEA1-1", "protein_name": "Hyperosmolality-gated Ca2+ permeable channel 1.1", "gene_name": "OSCA1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GUH7", "url": 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OSCA2.3 reveals mobile elements in the transmembrane domain.", "journal": "Structure", "date": "2024", "authors": "Jojoa-Cruz Sebastian, Burendei Batuujin, Lee Wen-Hsin, Ward Andrew B", "reference": { "type": "PubMed", "id": "38103547", "url": "https://pubmed.ncbi.nlm.nih.gov/38103547" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GUH7-1", "protein_name": "Hyperosmolality-gated Ca2+ permeable channel 2.3", "gene_name": "HYP1; OSCA2.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q5XEZ5-1", "protein_name": "Hyperosmolality-gated Ca2+ permeable channel 1.2", "gene_name": "OSCA1.2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GUH7", "url": "https://www.uniprot.org/uniprotkb/Q8GUH7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.38103547", 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Rodi\u00f1o Mar\u00eda, Sampedro Javier, Revilla Gloria, Zarra Ignacio", "reference": { "type": "PubMed", "id": "16267099", "url": "https://pubmed.ncbi.nlm.nih.gov/16267099" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GX69-1", "protein_name": "Beta-galactosidase 16", "gene_name": "BGAL16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCV4-1", "protein_name": "Beta-galactosidase 8", "gene_name": "BGAL8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCV0-1", "protein_name": "Beta-galactosidase 12", "gene_name": "BGAL12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCV3-1", "protein_name": "Beta-galactosidase 9", "gene_name": "BGAL9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCU9-1", "protein_name": "Beta-galactosidase 13", "gene_name": "BGAL13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFN4-1", "protein_name": "Beta-galactosidase 6", "gene_name": "BGAL6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FXE5-1", "protein_name": "Alpha-L-fucosidase 3", "gene_name": "FXG1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCV8-1", "protein_name": "Beta-galactosidase 4", "gene_name": "BGAL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCW1-1", "protein_name": "Beta-galactosidase 1", "gene_name": "BGAL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93Z24-1", "protein_name": "Beta-galactosidase 17", "gene_name": "BGAL17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J6T7-1", "protein_name": "Putative alpha-xylosidase 2", "gene_name": "XYL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C6W4-1", "protein_name": "Beta-galactosidase 15", "gene_name": "BGAL15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LFA6-1", "protein_name": "Beta-galactosidase 2", "gene_name": "BGAL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FN08-1", "protein_name": "Beta-galactosidase 10", "gene_name": "BGAL10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7Y7-1", "protein_name": "Alpha-xylosidase 1", "gene_name": "XYL1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GX69", "url": "https://www.uniprot.org/uniprotkb/Q8GX69" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16267099", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 15 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Functional genomic analysis of Arabidopsis thaliana glycoside hydrolase family 35.", "journal": "Phytochemistry", "date": "2007", "authors": "Ahn Young Ock, Zheng Meiying, Bevan David R, Esen Asim, Shiu Shin-Han, Benson Jonas, Peng Hsiao-Ping, Miller Joseph T, Cheng Chi-Lien, Poulton Jonathan E, Shih Ming-Che", "reference": { "type": "PubMed", "id": "17466346", "url": "https://pubmed.ncbi.nlm.nih.gov/17466346" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GX69-1", "protein_name": "Beta-galactosidase 16", "gene_name": "BGAL16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCU8-1", "protein_name": "Beta-galactosidase 14", "gene_name": "BGAL14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9MAJ7-1", "protein_name": "Beta-galactosidase 5", "gene_name": "BGAL5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCV4-1", "protein_name": "Beta-galactosidase 8", "gene_name": "BGAL8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCV0-1", "protein_name": "Beta-galactosidase 12", "gene_name": "BGAL12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCV5-1", "protein_name": "Beta-galactosidase 7", "gene_name": "BGAL7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCV3-1", "protein_name": "Beta-galactosidase 9", "gene_name": "BGAL9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCU9-1", "protein_name": "Beta-galactosidase 13", "gene_name": "BGAL13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCV1-1", "protein_name": "Beta-galactosidase 11", "gene_name": "BGAL11", "tax_name": 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"protein_name": "Beta-galactosidase 10", "gene_name": "BGAL10", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GX69", "url": "https://www.uniprot.org/uniprotkb/Q8GX69" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17466346", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 17 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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Biol. Chem.", "date": "2004", "authors": "Ishiyama Keiki, Inoue Eri, Watanabe-Takahashi Akiko, Obara Mitsuhiro, Yamaya Tomoyuki, Takahashi Hideki", "reference": { "type": "PubMed", "id": "14757761", "url": "https://pubmed.ncbi.nlm.nih.gov/14757761" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GXW5-1", "protein_name": "Glutamine synthetase cytosolic isozyme 1-5", "gene_name": "GLN1-5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMD9-1", "protein_name": "Glutamine synthetase cytosolic isozyme 1-4", "gene_name": "GLN1-4; GLN1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LCE1-1", "protein_name": "Glutamine synthetase cytosolic isozyme 1-2", "gene_name": "GLN1-2; GSR2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q56WN1-1", "protein_name": "Glutamine synthetase cytosolic isozyme 1-1", "gene_name": "GLN1-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LVI8-1", "protein_name": "Glutamine synthetase cytosolic isozyme 1-3", "gene_name": "GLN1-3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GXW5", "url": "https://www.uniprot.org/uniprotkb/Q8GXW5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.14757761", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Arabidopsis AtDi19 gene family encodes a novel type of Cys2/His2 zinc-finger protein implicated in ABA-independent dehydration, high-salinity stress and light signaling pathways.", "journal": "Plant Mol. Biol.", "date": "2006", "authors": "Milla Miguel A Rodriguez, Townsend Jared, Chang Ing-Feng, Cushman John C", "reference": { "type": "PubMed", "id": "16786289", "url": "https://pubmed.ncbi.nlm.nih.gov/16786289" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GWK1-1", "protein_name": "Protein DEHYDRATION-INDUCED 19 homolog 2", "gene_name": "DI19-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJ17-1", "protein_name": "Protein DEHYDRATION-INDUCED 19 homolog 7", "gene_name": "DI19-7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VXU6-1", "protein_name": "Protein DEHYDRATION-INDUCED 19 homolog 4", "gene_name": "DI19-4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04259-1", "protein_name": "Protein DEHYDRATION-INDUCED 19 homolog 5", "gene_name": "DI19-5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NM26-1", "protein_name": "Protein DEHYDRATION-INDUCED 19 homolog 6", "gene_name": "DI19-6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84J70-1", "protein_name": "Protein DEHYDRATION-INDUCED 19 homolog 3", "gene_name": "DI19-3; DIL9-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39083-1", "protein_name": "Protein DEHYDRATION-INDUCED 19", "gene_name": "DI19-1; DI19", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GWK1", "url": "https://www.uniprot.org/uniprotkb/Q8GWK1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16786289", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Purification of a plant mediator from Arabidopsis thaliana identifies PFT1 as the Med25 subunit.", "journal": "Mol. Cell", "date": "2007", "authors": "B\u00e4ckstr\u00f6m Stefan, Elfving Nils, Nilsson Robert, Wingsle Gunnar, Bj\u00f6rklund Stefan", "reference": { "type": "PubMed", "id": "17560376", "url": "https://pubmed.ncbi.nlm.nih.gov/17560376" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8LCH5-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 22b", "gene_name": "MED22B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMP0-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 19a", "gene_name": "MED19A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SA42-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 22a", "gene_name": "MED22A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LUG9-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 33A", "gene_name": "MED33A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q4V3C1-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 8", "gene_name": "MED8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I4P3-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 23", "gene_name": "MED23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZD7-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 7b", "gene_name": "MED7B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LYW3-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 7a", "gene_name": "MED7A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1A8-1", "protein_name": "DNA-directed RNA polymerases II, IV and V subunit 8B", "gene_name": "NRPB8B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80450-1", "protein_name": "Trihelix transcription factor GT-3b", "gene_name": "GT-3B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81097-1", "protein_name": "DNA-directed RNA polymerases II and V subunit 8A", "gene_name": "NRPB8A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HPA7-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 10b", "gene_name": "MED10B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RXK2-1", "protein_name": "Small RNA degrading nuclease 3", "gene_name": "SDN3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VYB1-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 31", "gene_name": "MED31", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLM8-1", "protein_name": "DNA-directed RNA polymerases II, IV and V subunit 12", "gene_name": "NRPB12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LFA5-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 28", "gene_name": "MED28", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SB42-1", "protein_name": "GLABROUS1 enhancer-binding protein-like", "gene_name": "GEBPL", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RWM3-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 27", "gene_name": "MED27; MED3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RWA2-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 9", "gene_name": "MED9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K460-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 17", "gene_name": "MED17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHX8-1", "protein_name": "Mediator-associated protein 3", "gene_name": "MJC20.17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4KF27-1", "protein_name": "Mediator-associated protein 2", "gene_name": "MUB3.20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6ID77-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 11", "gene_name": "MED11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q7XYY2-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 25", "gene_name": "MED25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84VW5-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 32", "gene_name": "MED32", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94AH9-1", "protein_name": "rRNA 2'-O-methyltransferase fibrillarin 2", "gene_name": "FIB2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CAF6-1", "protein_name": "DNA gyrase subunit A, chloroplastic/mitochondrial", "gene_name": "GYRA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LKR3-1", "protein_name": "Heat shock 70 kDa protein BIP1", "gene_name": "BIP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMV4-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 30", "gene_name": "MED30; MLE2.11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHZ2-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 10a", "gene_name": "MED10A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZ00-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 4", "gene_name": "MED4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39043-1", "protein_name": "Heat shock 70 kDa protein BIP2", "gene_name": "BIP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FT73-1", "protein_name": "ATP-dependent DNA helicase Q-like 2", "gene_name": "RECQL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I171-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 15a", "gene_name": "MED15A; NRB4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JGZ1-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 16", "gene_name": "MED16; SFR6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "B6EUA9-1", "protein_name": "Pre-mRNA-processing protein 40A", "gene_name": "PRP40A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LU16-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 21", "gene_name": "MED21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IN69-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 33B", "gene_name": "MED33B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NPF4-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 20a", "gene_name": "MED20A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IXJ7-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 6", "gene_name": "MED6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJZ6-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 18", "gene_name": "MED18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SR02-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 14", "gene_name": "MED14", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8LCH5", "url": "https://www.uniprot.org/uniprotkb/Q8LCH5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17560376", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 42 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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transcription subunit 19a", "gene_name": "MED19A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SA42-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 22a", "gene_name": "MED22A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SHV7-1", "protein_name": "Probable mediator of RNA polymerase II transcription subunit 15c", "gene_name": "MED15C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LT25-1", "protein_name": "Pre-mRNA-processing protein 40C", "gene_name": "PRP40C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LUG9-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 33A", "gene_name": "MED33A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q4V3C1-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 8", "gene_name": "MED8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I4P3-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 23", "gene_name": "MED23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZD7-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 7b", "gene_name": "MED7B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LYW3-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 7a", "gene_name": "MED7A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "H3K2Y6-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 12", "gene_name": "MED12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M0S0-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 20b", "gene_name": "MED20B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HPA7-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 10b", "gene_name": "MED10B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VYB1-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 31", "gene_name": "MED31", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LFA5-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 28", "gene_name": "MED28", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RWM3-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 27", "gene_name": "MED27; MED3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RWA2-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 9", "gene_name": "MED9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4KFC7-1", "protein_name": "Probable mediator of RNA polymerase II transcription subunit 26c", "gene_name": "MED26C; MYH9.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J4Y5-1", "protein_name": "Probable mediator of RNA polymerase II transcription subunit 26a", "gene_name": "MED26A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K460-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 17", "gene_name": "MED17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NQD9-1", "protein_name": "Probable mediator of RNA polymerase II transcription subunit 19b", "gene_name": "MED19B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I169-1", "protein_name": "Probable mediator of RNA polymerase II transcription subunit 15b", "gene_name": "MED15B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6ID77-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 11", "gene_name": "MED11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q7XYY2-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 25", "gene_name": "MED25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84VW5-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 32", "gene_name": "MED32", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H1B3-1", "protein_name": "Heat shock 70 kDa protein BIP3", "gene_name": "BIP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P22953-1", "protein_name": "Heat shock 70 kDa protein 1", "gene_name": "HSC70-1; HSP70-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P22954-1", "protein_name": "Heat shock 70 kDa protein 2", "gene_name": "HSP70-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94AH9-1", "protein_name": "rRNA 2'-O-methyltransferase fibrillarin 2", "gene_name": "FIB2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FEF8-1", "protein_name": "rRNA 2'-O-methyltransferase fibrillarin 1", "gene_name": "FIB1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LHA8-1", "protein_name": "Heat shock 70 kDa protein 4", "gene_name": "HSP70-4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LKR3-1", "protein_name": "Heat shock 70 kDa protein BIP1", "gene_name": "BIP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMV4-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 30", "gene_name": "MED30; MLE2.11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHK9-1", "protein_name": "Probable mediator of RNA polymerase II transcription subunit 26b", "gene_name": "MED26B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHZ2-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 10a", "gene_name": "MED10A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZ00-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 4", "gene_name": "MED4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39043-1", "protein_name": "Heat shock 70 kDa protein BIP2", "gene_name": "BIP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FT73-1", "protein_name": "ATP-dependent DNA helicase Q-like 2", "gene_name": "RECQL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JCC1-1", "protein_name": "Pre-mRNA-processing protein 40B", "gene_name": "PRP40B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I171-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 15a", "gene_name": "MED15A; NRB4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I096-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 13", "gene_name": "GCT; MED13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JGZ1-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 16", "gene_name": "MED16; SFR6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "B6EUA9-1", "protein_name": "Pre-mRNA-processing protein 40A", "gene_name": "PRP40A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LU16-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 21", "gene_name": "MED21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IN69-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 33B", "gene_name": "MED33B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NPF4-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 20a", "gene_name": "MED20A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IXJ7-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 6", "gene_name": "MED6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJZ6-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 18", "gene_name": "MED18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SR02-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 14", "gene_name": "MED14", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8LCH5", "url": "https://www.uniprot.org/uniprotkb/Q8LCH5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.22021418", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 49 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of a novel plant MAR DNA binding protein localized on chromosomal surfaces.", "journal": "Plant Mol. Biol.", "date": "2004", "authors": "Fujimoto Satoru, Matsunaga Sachihiro, Yonemura Masataka, Uchiyama Susumu, Azuma Takachika, Fukui Kiichi", "reference": { "type": "PubMed", "id": "15604740", "url": "https://pubmed.ncbi.nlm.nih.gov/15604740" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GXB3-1", "protein_name": "AT-hook motif nuclear-localized protein 5", "gene_name": "AHL12; AHL5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZX7-1", "protein_name": "AT-hook motif nuclear-localized protein 18", "gene_name": "AHL18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M2S3-1", "protein_name": "AT-hook motif nuclear-localized protein 15", "gene_name": "AHL15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LVB0-1", "protein_name": "AT-hook motif nuclear-localized protein 6", "gene_name": "AHL6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTA2-1", "protein_name": "AT-hook motif nuclear-localized protein 17", "gene_name": "AHL17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22130-1", "protein_name": "AT-hook motif nuclear-localized protein 22", "gene_name": "AHL22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M9R4-1", "protein_name": "AT-hook motif nuclear-localized protein 28", "gene_name": "AHL28", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZ70-1", "protein_name": "AT-hook motif nuclear-localized protein 26", "gene_name": "AHL26", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A1L4X7-1", "protein_name": "AT-hook motif nuclear-localized protein 14", "gene_name": "AHL14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SR17-1", "protein_name": "AT-hook motif nuclear-localized protein 19", "gene_name": "AHL19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q940I0-1", "protein_name": "AT-hook motif nuclear-localized protein 13", "gene_name": "AHL13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q4V3E0-1", "protein_name": "AT-hook motif nuclear-localized protein 7", "gene_name": "AHL7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L7L5-1", "protein_name": "AT-hook motif nuclear-localized protein 11", "gene_name": "AHL11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIR1-1", "protein_name": "AT-hook motif nuclear-localized protein 8", "gene_name": "AHL8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80834-1", "protein_name": "AT-hook motif nuclear-localized protein 9", "gene_name": "AHL9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22812-1", "protein_name": "AT-hook motif nuclear-localized protein 10", "gene_name": "AHL10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23620-1", "protein_name": "AT-hook motif nuclear-localized protein 23", "gene_name": "AHL23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49658-1", "protein_name": "AT-hook motif nuclear-localized protein 2", "gene_name": "AHL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49662-1", "protein_name": "AT-hook motif nuclear-localized protein 24", "gene_name": "AHL24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82166-1", "protein_name": "AT-hook motif nuclear-localized protein 21", "gene_name": "AHL21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9K7-1", "protein_name": "AT-hook motif nuclear-localized protein 29", "gene_name": "AHL29", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHM5-1", "protein_name": "AT-hook motif nuclear-localized protein 4", "gene_name": "AHL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GWQ2-1", "protein_name": "AT-hook motif nuclear-localized protein 20", "gene_name": "AHL20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6DBQ1-1", "protein_name": "AT-hook motif nuclear-localized protein 25", "gene_name": "AHL25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LPN5-1", "protein_name": "AT-hook motif nuclear-localized protein 12", "gene_name": "AHL12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VYJ2-1", "protein_name": "AT-hook motif nuclear-localized protein 1", "gene_name": "AHL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7C9-1", "protein_name": "AT-hook motif nuclear-localized protein 27", "gene_name": "AHL27", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SB31-1", "protein_name": "AT-hook motif nuclear-localized protein 3", "gene_name": "AHL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJG4-1", "protein_name": "AT-hook motif nuclear-localized protein 16", "gene_name": "AHL16", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GXB3", "url": "https://www.uniprot.org/uniprotkb/Q8GXB3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 93, "end_pos": 95, "sequence_org": "GRP", "sequence_mut": "AAA", "comment": "Reduces DNA-binding activity.", "evidence": [ { "database": "UniProtKB", "id": "Q8VYJ2", "url": "https://www.uniprot.org/uniprotkb/Q8VYJ2" }, { "database": "PubMed", "id": "15604740", "url": "https://pubmed.ncbi.nlm.nih.gov/15604740" } ], "uniprot_canonical_ac": "Q8VYJ2-1" } ], "record_id": "pubmed.15604740", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 29 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis thaliana AHL family modulates hypocotyl growth redundantly by interacting with each other via the PPC/DUF296 domain.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "2013", "authors": "Zhao Jianfei, Favero David S, Peng Hao, Neff Michael M", "reference": { "type": "PubMed", "id": "24218605", "url": "https://pubmed.ncbi.nlm.nih.gov/24218605" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GXB3-1", "protein_name": "AT-hook motif nuclear-localized protein 5", "gene_name": "AHL12; AHL5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZX7-1", "protein_name": "AT-hook motif nuclear-localized protein 18", "gene_name": "AHL18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M2S3-1", "protein_name": "AT-hook motif nuclear-localized protein 15", "gene_name": "AHL15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LVB0-1", "protein_name": "AT-hook motif nuclear-localized protein 6", "gene_name": "AHL6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTA2-1", "protein_name": "AT-hook motif nuclear-localized protein 17", "gene_name": "AHL17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22130-1", "protein_name": "AT-hook motif nuclear-localized protein 22", "gene_name": "AHL22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LPR5-1", "protein_name": "Transcription factor TCP4", "gene_name": "TCP4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7W5-1", "protein_name": "Transcription factor TCP13", "gene_name": "TCP13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M9R4-1", "protein_name": "AT-hook motif nuclear-localized protein 28", "gene_name": "AHL28", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZ70-1", "protein_name": "AT-hook motif nuclear-localized protein 26", "gene_name": "AHL26", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A1L4X7-1", "protein_name": "AT-hook motif nuclear-localized protein 14", "gene_name": "AHL14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FH54-1", "protein_name": "Ethylene-responsive transcription factor ERF114", "gene_name": "ERF114", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SR17-1", "protein_name": "AT-hook motif nuclear-localized protein 19", "gene_name": "AHL19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q940I0-1", "protein_name": "AT-hook motif nuclear-localized protein 13", "gene_name": "AHL13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q4V3E0-1", "protein_name": "AT-hook motif nuclear-localized protein 7", "gene_name": "AHL7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L7L5-1", "protein_name": "AT-hook motif nuclear-localized protein 11", "gene_name": "AHL11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIR1-1", "protein_name": "AT-hook motif nuclear-localized protein 8", "gene_name": "AHL8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80834-1", "protein_name": "AT-hook motif nuclear-localized protein 9", "gene_name": "AHL9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22812-1", "protein_name": "AT-hook motif nuclear-localized protein 10", "gene_name": "AHL10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23620-1", "protein_name": "AT-hook motif nuclear-localized protein 23", "gene_name": "AHL23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49658-1", "protein_name": "AT-hook motif nuclear-localized protein 2", "gene_name": "AHL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49662-1", "protein_name": "AT-hook motif nuclear-localized protein 24", "gene_name": "AHL24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82166-1", "protein_name": "AT-hook motif nuclear-localized protein 21", "gene_name": "AHL21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LQQ4-1", "protein_name": "Histone H2B.1", "gene_name": "F24B9.10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C598-1", "protein_name": "Protein ATAF2", "gene_name": "NAC081", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9K7-1", "protein_name": "AT-hook motif nuclear-localized protein 29", "gene_name": "AHL29", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHM5-1", "protein_name": "AT-hook motif nuclear-localized protein 4", "gene_name": "AHL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GWQ2-1", "protein_name": "AT-hook motif nuclear-localized protein 20", "gene_name": "AHL20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P59169-1", "protein_name": "Histone H3.3", "gene_name": "H33; HTR4; HTR5; HTR8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P59259-1", "protein_name": "Histone H4", "gene_name": "F16L2_140; F18L15.40; F24B9.25; F24B9.8; F5K20_30; F8N16.2; MMN10.22; MTH12.10; T11P11.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6DBQ1-1", "protein_name": "AT-hook motif nuclear-localized protein 25", "gene_name": "AHL25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LPN5-1", "protein_name": "AT-hook motif nuclear-localized protein 12", "gene_name": "AHL12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VYJ2-1", "protein_name": "AT-hook motif nuclear-localized protein 1", "gene_name": "AHL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7C9-1", "protein_name": "AT-hook motif nuclear-localized protein 27", "gene_name": "AHL27", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SB31-1", "protein_name": "AT-hook motif nuclear-localized protein 3", "gene_name": "AHL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJG4-1", "protein_name": "AT-hook motif nuclear-localized protein 16", "gene_name": "AHL16", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GXB3", "url": "https://www.uniprot.org/uniprotkb/Q8GXB3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 77, "end_pos": 77, "sequence_org": "R", "sequence_mut": "H", "comment": "In sob3-6; Abolishes binding to AT-rich DNA; Exhibits a long hypocotyl phenotype in the light.", "evidence": [ { "database": "UniProtKB", "id": "Q9C9K7", "url": "https://www.uniprot.org/uniprotkb/Q9C9K7" }, { "database": "PubMed", "id": "18088311", "url": "https://pubmed.ncbi.nlm.nih.gov/18088311" }, { "database": "PubMed", "id": "24218605", "url": "https://pubmed.ncbi.nlm.nih.gov/24218605" } ], "uniprot_canonical_ac": "Q9C9K7-1" }, { "start_pos": 91, "end_pos": 91, "sequence_org": "R", "sequence_mut": "H", "comment": "In esc-11; Exhibits a long hypocotyl phenotype in the light.", "evidence": [ { "database": "UniProtKB", "id": "Q9S7C9", "url": "https://www.uniprot.org/uniprotkb/Q9S7C9" }, { "database": "PubMed", "id": "24218605", "url": "https://pubmed.ncbi.nlm.nih.gov/24218605" } ], "uniprot_canonical_ac": "Q9S7C9-1" } ], "record_id": "pubmed.24218605", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 36 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The TIE1 transcriptional repressor links TCP transcription factors with TOPLESS/TOPLESS-RELATED corepressors and modulates leaf development in Arabidopsis.", "journal": "Plant Cell", "date": "2013", "authors": "Tao Qing, Guo Dongshu, Wei Baoye, Zhang Fan, Pang Changxu, Jiang Hao, Zhang Jinzhe, Wei Tong, Gu Hongya, Qu Li-Jia, Qin Genji", "reference": { "type": "PubMed", "id": "23444332", "url": "https://pubmed.ncbi.nlm.nih.gov/23444332" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84X40-1", "protein_name": "Protein SPEAR1", "gene_name": "SPEAR1; 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when associated with S-189 and Ser-191.", "evidence": [ { "database": "UniProtKB", "id": "Q6IDB0", "url": "https://www.uniprot.org/uniprotkb/Q6IDB0" }, { "database": "PubMed", "id": "23444332", "url": "https://pubmed.ncbi.nlm.nih.gov/23444332" } ], "uniprot_canonical_ac": "Q6IDB0-1" } ], "record_id": "pubmed.23444332", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 9 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "SPOROCYTELESS is a novel embryophyte-specific transcription repressor that interacts with TPL and TCP proteins in Arabidopsis.", "journal": "J. Genet. Genomics", "date": "2014", "authors": "Chen Guang-Hui, Sun Jia-Ying, Liu Man, Liu Jie, Yang Wei-Cai", "reference": { "type": "PubMed", "id": "25527103", "url": "https://pubmed.ncbi.nlm.nih.gov/25527103" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84X40-1", "protein_name": "Protein SPEAR1", "gene_name": "SPEAR1; TIE2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SHQ9-1", "protein_name": "Protein SPEAR4", "gene_name": "SPEAR4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJK7-1", "protein_name": "Transcription factor TCP11", "gene_name": "TCP11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IGU3-1", "protein_name": "Protein SPEAR2", "gene_name": "SPEAR2; TIE4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64647-1", "protein_name": "Transcription factor TCP9", "gene_name": "TCP9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81836-1", "protein_name": "Protein SPOROCYTELESS", "gene_name": "SPL", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82277-1", "protein_name": "Transcription factor TCP10", "gene_name": "TCP10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LPR5-1", "protein_name": "Transcription factor TCP4", "gene_name": "TCP4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94AI7-1", "protein_name": "Protein TOPLESS", "gene_name": "TPL", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C518-1", "protein_name": "Transcription factor TCP8", "gene_name": "TCP8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C758-1", "protein_name": "Transcription factor TCP24", "gene_name": "TCP24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9L2-1", "protein_name": "Transcription factor TCP15", "gene_name": "TCP15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FME3-1", "protein_name": "Transcription factor TCP5", "gene_name": "TCP5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FTA2-1", "protein_name": "Transcription factor TCP21", "gene_name": "TCP21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LQF0-1", "protein_name": "Transcription factor TCP23", "gene_name": "TCP23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9MAH8-1", "protein_name": "Transcription factor TCP3", "gene_name": "TCP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7W5-1", "protein_name": "Transcription factor TCP13", "gene_name": "TCP13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FYG7-1", "protein_name": "Transcription factor TCP1", "gene_name": "TCP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XFB0-1", "protein_name": "Putative axial regulator YABBY 2", "gene_name": "YAB2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84JM4-1", "protein_name": "Topless-related protein 3", "gene_name": "TPR3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GW46-1", "protein_name": "Axial regulator YABBY 5", "gene_name": "YAB5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93V43-1", "protein_name": "Transcription factor TCP2", "gene_name": "TCP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WV90-2", "protein_name": "Topless-related protein 1", "gene_name": "TPR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XFB1-1", "protein_name": "Axial regulator YABBY 3", "gene_name": "YAB3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSD5-1", "protein_name": "Transcription factor TCP20", "gene_name": "TCP20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLM6-1", "protein_name": "Transcription factor TCP6", "gene_name": "TCP6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LRZ0-1", "protein_name": "Topless-related protein 2", "gene_name": "TPR2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q27GK7-1", "protein_name": "Topless-related protein 4", "gene_name": "TPR4; WSIP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6IDB0-1", "protein_name": "Protein SPEAR3", "gene_name": "SPEAR3; TIE1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LEZ9-1", "protein_name": "Transcription factor TCP17", "gene_name": "TCP17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22152-1", "protein_name": "Axial regulator YABBY 1", "gene_name": "AFO; YAB1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84X40", "url": "https://www.uniprot.org/uniprotkb/Q84X40" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.25527103", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 31 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Arabidopsis onset of leaf death5 mutation of quinolinate synthase affects nicotinamide adenine dinucleotide biosynthesis and causes early ageing.", "journal": "Plant Cell", "date": "2008", "authors": "Schippers Jos H M, Nunes-Nesi Adriano, Apetrei Roxana, Hille Jacques, Fernie Alisdair R, Dijkwel Paul P", "reference": { "type": "PubMed", "id": "18978034", "url": "https://pubmed.ncbi.nlm.nih.gov/18978034" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84WV8-1", "protein_name": "Nicotinate phosphoribosyltransferase 2", "gene_name": "NAPRT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZW18-1", "protein_name": "Senescence-associated protein 13", "gene_name": "SAG13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RWM2-1", "protein_name": "Nicotinate phosphoribosyltransferase 1", "gene_name": "NAPRT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3E6S9-1", "protein_name": "Probable L-cysteine desulfhydrase, chloroplastic", "gene_name": "CpNIFS3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93WX6-1", "protein_name": "Cysteine desulfurase 1, chloroplastic", "gene_name": "NFS2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94AY1-1", "protein_name": "L-aspartate oxidase, chloroplastic", "gene_name": "AO", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FGS4-1", "protein_name": "Quinolinate synthase, chloroplastic", "gene_name": "QS", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1G3U6-1", "protein_name": "Plant cysteine oxidase 3", "gene_name": "PCO3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84WV8", "url": "https://www.uniprot.org/uniprotkb/Q84WV8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 101, "end_pos": 101, "sequence_org": "P", "sequence_mut": "S", "comment": "In old5; early senescence, high levels of tricarboxylic acid cycle intermediates and nitrogen-containing amino acids, decreased stimulation of the Cys desulfurase activity of NFS2, and increased respiration rate and antioxidant accumulation.", "evidence": [ { "database": "UniProtKB", "id": "Q9FGS4", "url": "https://www.uniprot.org/uniprotkb/Q9FGS4" }, { "database": "PubMed", "id": "18978034", "url": "https://pubmed.ncbi.nlm.nih.gov/18978034" } ], "uniprot_canonical_ac": "Q9FGS4-1" } ], "record_id": "pubmed.18978034", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 8 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "AtATG18a is required for the formation of autophagosomes during nutrient stress and senescence in Arabidopsis thaliana.", "journal": "Plant J.", "date": "2005", "authors": "Xiong Yan, Contento Anthony L, Bassham Diane C", "reference": { "type": "PubMed", "id": "15860012", "url": "https://pubmed.ncbi.nlm.nih.gov/15860012" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GYD7-1", "protein_name": "Autophagy-related protein 18c", "gene_name": "ATG18C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GUL1-1", "protein_name": "Autophagy-related protein 18g", "gene_name": "ATG18G", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H1Q5-1", "protein_name": "Autophagy-related protein 18h", "gene_name": "ATG18H", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H1Q8-1", "protein_name": "Autophagy-related protein 18b", "gene_name": "ATG18B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WPK3-1", "protein_name": "Autophagy-related protein 18d", "gene_name": "ATG18D", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93VB2-1", "protein_name": "Autophagy-related protein 18a", "gene_name": "ATG18A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FH32-1", "protein_name": "Autophagy-related protein 18f", "gene_name": "ATG18F; G18F", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHK8-1", "protein_name": "Autophagy-related protein 18e", "gene_name": "ATG18E", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GYD7", "url": "https://www.uniprot.org/uniprotkb/Q8GYD7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15860012", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 8 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry.", "journal": "Molecular & cellular proteomics : MCP", "date": "2003-11", "authors": "N\u00fchse Thomas S, Stensballe Allan, Jensen Ole N, Peck Scott C", "reference": { "type": "PubMed", "id": "14506206", "url": "https://pubmed.ncbi.nlm.nih.gov/14506206" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8VZI2-1", "protein_name": "DUF21 domain-containing protein At4g33700", "gene_name": "CBSDUF6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C508-1", "protein_name": "Probable purine permease 18", "gene_name": "PUP18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LVN2-1", "protein_name": "Probably inactive leucine-rich repeat receptor-like protein kinase At5g58150", "gene_name": "MCK7.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C7J8-1", "protein_name": "Enolase (DUF1399)", "gene_name": "F14G9.16; F14G9_16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXJ3-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WQK2-1", "protein_name": "Probable protein S-acyltransferase 7", "gene_name": "PAT07", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LY51-1", "protein_name": "Phosphoinositide phospholipase C 7", "gene_name": "PLC7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HW65-1", "protein_name": "Protein STICHEL-like 1", "gene_name": "F14L17.24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LYG9-1", "protein_name": "Mechanosensitive ion channel protein 10", "gene_name": "MSL10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LIM6-1", "protein_name": "BTB/POZ domain-containing protein At3g26490", "gene_name": "F20C19.23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LVQ9-1", "protein_name": "Protein kinase superfamily protein", "gene_name": "MSN2.10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T038-1", "protein_name": "Microtubule-associated protein-like protein", "gene_name": "T22F8.220; T22F8_220", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49545-1", "protein_name": "Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1", "gene_name": "BAM1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMD7-1", "protein_name": "Probable inactive receptor kinase At5g16590", "gene_name": "MTG13.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FRI1-1", "protein_name": "Leucine-rich repeat protein kinase family protein", "gene_name": "F4F7.29; F4F7_29", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LVI6-1", "protein_name": "Probable inactive receptor kinase RLK902", "gene_name": "RLK902", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LX66-1", "protein_name": "Receptor-like protein kinase HERK 1", "gene_name": "HERK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M8T0-1", "protein_name": "Probable inactive receptor kinase At3g02880", "gene_name": "F13E7.17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZWC8-1", "protein_name": "Serine/threonine-protein kinase BRI1-like 1", "gene_name": "BRL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S791-1", "protein_name": "Uncharacterized protein", "gene_name": "F5A18.5; F5A18_5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SX98-1", "protein_name": "Lysine histidine transporter-like 8", "gene_name": "AATL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XI29-1", "protein_name": "Uncharacterized protein At1g15400", "gene_name": "F9L1.35", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLV9-1", "protein_name": "S-type anion channel SLAH3", "gene_name": "SLAH3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYM1-1", "protein_name": "Mechanosensitive ion channel protein 6", "gene_name": "MSL6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZUU9-1", "protein_name": "ABC transporter G family member 3", "gene_name": "ABCG3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6AWW5-1", "protein_name": "Ankyrin repeat-containing protein At5g02620", "gene_name": "ANK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C636-1", "protein_name": "Transmembrane protein", "gene_name": "CC1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94BT2-1", "protein_name": "Auxin-induced in root cultures protein 12", "gene_name": "AIR12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94AZ2-1", "protein_name": "Sugar transport protein 13", "gene_name": "STP13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFH6-1", "protein_name": "Fasciclin-like arabinogalactan protein 13", "gene_name": "FLA13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFS0-1", "protein_name": "Reticulon-like protein B4", "gene_name": "RTNLB4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LFH9-1", "protein_name": "L-type lectin-domain containing receptor kinase VIII.1", "gene_name": "LECRK81", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LRP3-1", "protein_name": "Probable receptor-like protein kinase At3g17420", "gene_name": "MTO12.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SB58-1", "protein_name": "Protein S-acyltransferase 8", "gene_name": "PAT08", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCT4-1", "protein_name": "Probably inactive leucine-rich repeat receptor-like protein kinase IMK2", "gene_name": "IMK2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RY60-1", "protein_name": "DUF21 domain-containing protein At1g47330", "gene_name": "CBSDUF7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93Y06-1", "protein_name": "Probable inactive receptor kinase At5g67200", "gene_name": "K21H1.16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCZ4-1", "protein_name": "Receptor-like protein kinase FERONIA", "gene_name": "FER", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L4X4-1", "protein_name": "Probable GABA transporter 2", "gene_name": "K16L22.8", "tax_name": 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"tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P27450-1", "protein_name": "Probable serine/threonine-protein kinase CST", "gene_name": "CST", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82302-1", "protein_name": "Protein phosphatase 2C 29", "gene_name": "PLL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q941L0-1", "protein_name": "Cellulose synthase A catalytic subunit 3 [UDP-forming]", "gene_name": "CESA3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ASS4-1", "protein_name": "Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380", "gene_name": "K23F3.10; MJE7.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96303-1", "protein_name": "Inorganic phosphate transporter 1-4", "gene_name": "PHT1-4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8E6-1", "protein_name": "Protein PLASTID MOVEMENT IMPAIRED 1", "gene_name": "PMI1", "tax_name": "Mouse-ear cress" }, { 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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Phosphoproteomics of the Arabidopsis plasma membrane and a new phosphorylation site database.", "journal": "Plant Cell", "date": "2004", "authors": "N\u00fchse Thomas S, Stensballe Allan, Jensen Ole N, Peck Scott C", "reference": { "type": "PubMed", "id": "15308754", "url": "https://pubmed.ncbi.nlm.nih.gov/15308754" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8VZI2-1", "protein_name": "DUF21 domain-containing protein At4g33700", "gene_name": "CBSDUF6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C508-1", "protein_name": "Probable purine permease 18", "gene_name": "PUP18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LVN2-1", "protein_name": "Probably inactive leucine-rich repeat receptor-like protein kinase At5g58150", "gene_name": "MCK7.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SKT3-1", "protein_name": "Secretory carrier-associated membrane protein 1", "gene_name": "SCAMP1; SCAMP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M2D8-1", "protein_name": "Uncharacterized protein 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channel protein 4", "gene_name": "MSL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LT87-1", "protein_name": "Protein kinase superfamily protein", "gene_name": "", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LVQ9-1", "protein_name": "Protein kinase superfamily protein", "gene_name": "MSN2.10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LYS5-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T038-1", "protein_name": "Microtubule-associated protein-like protein", "gene_name": "T22F8.220; T22F8_220", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LUL4-1", "protein_name": "Protein STRUBBELIG-RECEPTOR FAMILY 7", "gene_name": "SRF7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P19456-1", "protein_name": "ATPase 2, plasma membrane-type", "gene_name": "AHA2; HA2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49545-1", "protein_name": "Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1", "gene_name": "BAM1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80837-1", "protein_name": "Remorin", "gene_name": "DBP", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WR59-1", "protein_name": "Probable inactive receptor kinase At5g10020", "gene_name": "T31P16.10; T31P16_9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39016-1", "protein_name": "Calcium-dependent protein kinase 11", "gene_name": "CPK11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZG8-1", "protein_name": "MDIS1-interacting receptor like kinase 2", "gene_name": "MIK2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q944A7-1", "protein_name": "Serine/threonine-protein kinase BSK1", "gene_name": "BSK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9Y8-1", "protein_name": "Probable inactive receptor kinase At3g08680", "gene_name": "F17O14.15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FK10-1", "protein_name": "Probable inactive receptor kinase At5g53320", "gene_name": "K19E1.12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMD7-1", "protein_name": "Probable inactive receptor kinase At5g16590", "gene_name": "MTG13.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FRI1-1", "protein_name": "Leucine-rich repeat protein kinase family protein", "gene_name": "F4F7.29; F4F7_29", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJF3-1", "protein_name": "Receptor-like protein kinase BRI1-like 3", "gene_name": "BRL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LP77-1", "protein_name": "Probable inactive receptor kinase At1g48480", "gene_name": "RKL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LVI6-1", "protein_name": "Probable inactive receptor kinase RLK902", "gene_name": "RLK902", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LX66-1", "protein_name": "Receptor-like protein kinase HERK 1", "gene_name": "HERK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M8T0-1", "protein_name": "Probable inactive receptor kinase At3g02880", "gene_name": "F13E7.17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZWC8-1", "protein_name": "Serine/threonine-protein kinase BRI1-like 1", "gene_name": "BRL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22881-1", "protein_name": "Potassium transporter 2", "gene_name": "POT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVW8-1", "protein_name": "Plant intracellular Ras-group-related LRR protein 4", "gene_name": "PIRL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S791-1", "protein_name": "Uncharacterized protein", "gene_name": "F5A18.5; F5A18_5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SX98-1", "protein_name": "Lysine histidine transporter-like 8", "gene_name": "AATL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XI29-1", "protein_name": "Uncharacterized protein At1g15400", "gene_name": "F9L1.35", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGK4-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At2g16250", "gene_name": "F16F14.25; F16F14_25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLV9-1", "protein_name": "S-type anion channel SLAH3", "gene_name": "SLAH3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIL1-1", "protein_name": "Serine/threonine-protein kinase BSK5", "gene_name": "BSK5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSC1-1", "protein_name": "MAPK kinase substrate protein At1g80180", "gene_name": "F18B13.26", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYM1-1", "protein_name": "Mechanosensitive ion channel protein 6", "gene_name": "MSL6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZUU9-1", "protein_name": "ABC transporter G family member 3", "gene_name": "ABCG3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6AWW5-1", "protein_name": "Ankyrin repeat-containing protein At5g02620", "gene_name": "ANK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C636-1", "protein_name": "Transmembrane protein", "gene_name": "CC1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q944N8-1", "protein_name": "Equilibrative nucleotide transporter 6", "gene_name": "ENT6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94AZ2-1", "protein_name": "Sugar transport protein 13", "gene_name": "STP13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFS0-1", "protein_name": "Reticulon-like protein B4", "gene_name": "RTNLB4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LME4-1", "protein_name": "Probable protein phosphatase 2C 9", "gene_name": "PAPP2C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LI83-1", "protein_name": "Phospholipid-transporting ATPase 10", "gene_name": "ALA10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FM85-1", "protein_name": "Probable serine/threonine-protein kinase PBL16", "gene_name": "PBL16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LFH9-1", "protein_name": "L-type lectin-domain containing receptor kinase VIII.1", "gene_name": "LECRK81", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LRP3-1", "protein_name": "Probable receptor-like protein kinase At3g17420", "gene_name": "MTO12.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M2A0-1", "protein_name": "ATPase 8, plasma membrane-type", "gene_name": "AHA8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SB58-1", "protein_name": "Protein S-acyltransferase 8", "gene_name": "PAT08", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCT4-1", "protein_name": "Probably inactive leucine-rich repeat receptor-like protein kinase IMK2", "gene_name": "IMK2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SU58-1", "protein_name": "ATPase 4, plasma membrane-type", "gene_name": "AHA4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZR1-1", "protein_name": "Calcium-transporting ATPase 10, plasma membrane-type", "gene_name": "ACA10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CB03-1", "protein_name": "Protein NPGR1", "gene_name": "NPGR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RY60-1", "protein_name": "DUF21 domain-containing protein At1g47330", "gene_name": "CBSDUF7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93Y06-1", "protein_name": "Probable inactive receptor kinase At5g67200", "gene_name": "K21H1.16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93ZH7-1", "protein_name": "Protein IQ-DOMAIN 2", "gene_name": "IQD2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCZ4-1", "protein_name": "Receptor-like protein kinase FERONIA", "gene_name": "FER", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48832-1", "protein_name": "Protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic", "gene_name": "ERD7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64769-1", "protein_name": "Potassium transporter 11", "gene_name": "KUP11; POT11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22757-1", "protein_name": "MLO-like protein 8", "gene_name": "MLO8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49621-1", "protein_name": "MLO-like protein 1", "gene_name": "MLO1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3EDL4-1", "protein_name": "Probable serine/threonine-protein kinase At1g01540", "gene_name": "F22L4.8; F22L4_8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L4X4-1", "protein_name": "Probable GABA transporter 2", "gene_name": "K16L22.8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RYE2-1", "protein_name": "Camphor resistance CrcB family protein", "gene_name": "FEX", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S8L9-1", "protein_name": "Uncharacterized TPR repeat-containing protein At2g32450", "gene_name": "T32F6.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93Z13-1", "protein_name": "Probable boron transporter 3", "gene_name": "BOR3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZU46-1", "protein_name": "Receptor protein kinase-like protein ZAR1", "gene_name": "ZAR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IPZ3-1", "protein_name": "Leucine-rich repeat protein kinase family protein", "gene_name": "T2N18.19; T2N18_19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I854-1", "protein_name": "Protein kinase superfamily protein", "gene_name": "T8L23.17; T8L23_17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JMF4-1", "protein_name": "Protein kinase superfamily protein", "gene_name": "T12H20.4; T12H20_4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J5Y7-1", "protein_name": "Protein kinase superfamily protein", "gene_name": "", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKV9-1", "protein_name": "Protein kinase superfamily protein", "gene_name": "K9L2.5; K9L2_5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23052-1", "protein_name": "Uncharacterized TPR repeat-containing protein At1g05150", "gene_name": "YUP8H12.24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RVL2-1", "protein_name": "Calpain-type cysteine protease DEK1", "gene_name": "DEK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZU2-1", "protein_name": "Syntaxin-132", "gene_name": "SYP132", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L778-1", "protein_name": "Cellulose synthase A catalytic subunit 5 [UDP-forming]", "gene_name": "CESA5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RWN7-1", "protein_name": "Protein phosphatase 2C 32", "gene_name": "POL", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RX77-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.13", "gene_name": "NPF2.13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RXX9-1", "protein_name": "E3 ubiquitin-protein ligase ATL6", "gene_name": "ATL6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W4I7-1", "protein_name": "Calcium-dependent protein kinase 13", "gene_name": "CPK13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SHC8-1", "protein_name": "Vesicle-associated protein 1-2", "gene_name": "PVA12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q944G5-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.10", "gene_name": "NPF2.10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FDZ5-1", "protein_name": "UDP-rhamnose/UDP-galactose transporter 6", "gene_name": "URGT6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LKW9-1", "protein_name": "Sodium/hydrogen exchanger 7", "gene_name": "NHX7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80725-1", "protein_name": "ABC transporter B family member 4", "gene_name": "ABCB4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48788-1", "protein_name": "Probable inactive receptor kinase At2g26730", "gene_name": "F18A8.10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48946-1", "protein_name": "Cellulose synthase A catalytic subunit 1 [UDP-forming]", "gene_name": "CESA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64728-1", "protein_name": "Protein STICHEL", "gene_name": "STI", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GYN5-1", "protein_name": "RPM1-interacting protein 4", "gene_name": "RIN4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P43287-1", "protein_name": "Aquaporin PIP2-2", "gene_name": "PIP2-2; PIP2B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P20431-1", "protein_name": "ATPase 3, plasma membrane-type", "gene_name": "AHA3; HA3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P27450-1", "protein_name": "Probable serine/threonine-protein kinase CST", "gene_name": "CST", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82302-1", "protein_name": "Protein phosphatase 2C 29", "gene_name": "PLL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P30302-1", "protein_name": "Aquaporin PIP2-3", "gene_name": "PIP2-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P43286-1", "protein_name": "Aquaporin PIP2-1", "gene_name": "PIP2-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q941L0-1", "protein_name": "Cellulose synthase A catalytic subunit 3 [UDP-forming]", "gene_name": "CESA3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XIC7-1", "protein_name": "Somatic embryogenesis receptor kinase 2", "gene_name": "SERK2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94C26-1", "protein_name": "Cysteine-rich and transmembrane domain-containing protein PCC1", "gene_name": "PCC1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96303-1", "protein_name": "Inorganic phosphate transporter 1-4", "gene_name": "PHT1-4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ASQ2-1", "protein_name": "Transcription factor MAMYB", "gene_name": "MAMYB", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8E6-1", "protein_name": "Protein PLASTID MOVEMENT IMPAIRED 1", "gene_name": "PMI1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8X2-1", "protein_name": "Sucrose transport protein SUC5", "gene_name": "SUC5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFW5-1", "protein_name": "Proline-rich receptor-like protein kinase PERK8", "gene_name": "PERK8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LDF2-1", "protein_name": "Ceramide synthase LOH1", "gene_name": "LOH1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LF79-1", "protein_name": "Calcium-transporting ATPase 8, plasma membrane-type", "gene_name": "ACA8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LK35-1", "protein_name": "Receptor-like protein kinase THESEUS 1", "gene_name": "THE1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XIE2-1", "protein_name": "ABC transporter G family member 36", "gene_name": "ABCG36", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZR72-1", "protein_name": "ABC transporter B family member 1", "gene_name": "ABCB1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6R3K9-1", "protein_name": "Metal-nicotianamine transporter YSL2", "gene_name": "YSL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FXI5-1", "protein_name": "Protein IQ-DOMAIN 32", "gene_name": "IQD32", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLT4-1", "protein_name": "ABC transporter A family member 10", "gene_name": "ABCA10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLW0-1", "protein_name": "Probable receptor-like protein kinase At5g24010", "gene_name": "MZF18.11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FVQ5-1", "protein_name": "Hyperosmolality-gated Ca2+ permeable channel 1.8", "gene_name": "OSCA1.8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FVW3-1", "protein_name": "Putative methylesterase 14, chloroplastic", "gene_name": "MES14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FWX7-1", "protein_name": "ABC transporter B family member 11", "gene_name": "ABCB11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LIB3-1", "protein_name": "BAG family molecular chaperone regulator 8, chloroplastic", "gene_name": "BAG1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZUV4-1", "protein_name": "Major facilitator superfamily protein", "gene_name": "OTU1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZVD1-1", "protein_name": "BZIP transcription factor (DUF630 and DUF632)", "gene_name": "T20P8.14; T20P8_14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3E7D0-1", "protein_name": "Nucleobase-ascorbate transporter 12", "gene_name": "NAT12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39203-1", "protein_name": "G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2", "gene_name": "RLK4; SD22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39033-1", "protein_name": "Phosphoinositide phospholipase C 2", "gene_name": "PLC2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P54144-1", "protein_name": "Ammonium transporter 1 member 1", "gene_name": "AMT1-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P93004-1", "protein_name": "Aquaporin PIP2-7", "gene_name": "PIP2-7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1PDV6-1", "protein_name": "Serine/threonine-protein kinase PBL27", "gene_name": "PBL27", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38868-1", "protein_name": "Calcium-dependent protein kinase 9", "gene_name": "CPK9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38890-1", "protein_name": "Endoglucanase 25", "gene_name": "KOR", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NLQ6-1", "protein_name": "Calcium-dependent protein kinase 32", "gene_name": "CPK32", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q42438-1", "protein_name": "Calcium-dependent protein kinase 8", "gene_name": "CPK8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJK3-1", "protein_name": "Ceramide synthase LOH2", "gene_name": "LOH2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1I9LSL0-1", "protein_name": "Mitochondrial substrate carrier family protein", "gene_name": "", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZQX8-1", "protein_name": "Protein NETWORKED 1C", "gene_name": "NET1C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZVA7-1", "protein_name": "Protein SHOU4", "gene_name": "SHOU4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HU55-1", "protein_name": "Serine/threonine-protein kinase BSK4", "gene_name": "BSK4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4ICB6-1", "protein_name": "Protein IMPAIRED IN BABA-INDUCED STERILITY 1", "gene_name": "IBS1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J061-1", "protein_name": "Protein IQ-DOMAIN 5", "gene_name": "IQD5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23144-1", "protein_name": "Proton pump-interactor 1", "gene_name": "PPI1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P20649-1", "protein_name": "ATPase 1, plasma membrane-type", "gene_name": "AHA1; HA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49654-1", "protein_name": "Leucine-rich repeat protein kinase family protein", "gene_name": "T12H17.120; T12H17_120", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82352-1", "protein_name": "Reticulon-like protein B5", "gene_name": "RTNLB5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LYU7-1", "protein_name": "Inactive leucine-rich repeat receptor-like protein kinase CORYNE", "gene_name": "CRN", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M8Z7-1", "protein_name": "Sterol 3-beta-glucosyltransferase UGT80A2", "gene_name": "SGT; UGT80A2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1Q9-1", "protein_name": "ABC transporter B family member 21", "gene_name": "ABCB21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M324-1", "protein_name": 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TMT3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FYG3-1", "protein_name": "Probable plastidic glucose transporter 2", "gene_name": "F1N21.12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M0Z9-1", "protein_name": "Sugar transporter ERD6-like 15", "gene_name": "T4B21.9; T4B21_9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTP6-1", "protein_name": "Putative sugar transporter ERD6-like 13", "gene_name": "MQC12.5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23492-1", "protein_name": "Inositol transporter 4", "gene_name": "INT4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCW7-1", "protein_name": "Sugar transporter ERD6-like 1", "gene_name": "SUGTL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XIH6-1", "protein_name": "Putative polyol transporter 2", "gene_name": "PLT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XIH7-1", "protein_name": "Putative polyol transporter 1", "gene_name": "PLT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZNS0-1", "protein_name": "Probable polyol transporter 3", "gene_name": "PLT3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94KE0-1", "protein_name": "Sugar transporter ESL1", "gene_name": "ESL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WQ63-1", "protein_name": "Sugar transporter ERD6-like 8", "gene_name": "T12H1.11; T12H1_11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WVE9-1", "protein_name": "Probable plastidic glucose transporter 1", "gene_name": "T7A14.10; T7A14_10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P93051-1", "protein_name": "Sugar transporter ERD6-like 7", "gene_name": "ZIF2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WUU6-1", "protein_name": "Probable polyol transporter 4", "gene_name": "PLT4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GW61-1", "protein_name": "Sugar transport protein 14", "gene_name": "STP14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3ECP7-1", "protein_name": "Sugar transporter ERD6-like 5", "gene_name": "T22H22.15; T22H22_15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94AF9-1", "protein_name": "Sugar transporter ERD6-like 11", "gene_name": "T12H1.13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93Y91-1", "protein_name": "Sugar transport protein 5", "gene_name": "STP5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q4F7G0-1", "protein_name": "Sugar transporter ERD6-like 2", "gene_name": "SUGTL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94CI6-1", "protein_name": "Sugar transporter ERD6-like 18", "gene_name": "SFP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q7XA64-1", "protein_name": "Sugar transporter ERD6-like 9", "gene_name": "T12H1.36", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93Z80-1", "protein_name": "Sugar transporter ERD6-like 10", "gene_name": "T12H1.12; T12H1.13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZT3-1", "protein_name": "Sugar transporter ERD6-like 12", "gene_name": "SUGTL5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L6Z8-1", "protein_name": "D-xylose-proton symporter-like 1", "gene_name": "T17B22.22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94AZ2-1", "protein_name": "Sugar transport protein 13", "gene_name": "STP13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMX3-1", "protein_name": "Sugar transport protein 11", "gene_name": "STP11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SFG0-1", "protein_name": "Sugar transport protein 6", "gene_name": "STP6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L7R8-1", "protein_name": "Sugar transport protein 3", "gene_name": "STP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94CI7-1", "protein_name": "Sugar transporter ERD6-like 17", "gene_name": "SFP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04036-1", "protein_name": "Sugar transporter ERD6", "gene_name": "ERD6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04249-1", "protein_name": "Sugar transport protein 7", "gene_name": "STP7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q2V4B9-1", "protein_name": "Probable plastidic glucose transporter 3", "gene_name": "SGB1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6AWX0-1", "protein_name": "D-xylose-proton symporter-like 2", "gene_name": "F2K13.160; F2K13_160", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WWW9-1", "protein_name": "D-xylose-proton symporter-like 3, chloroplastic", "gene_name": "MNC17.140; MNC17.15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q56ZZ7-1", "protein_name": "Plastidic glucose transporter 4", "gene_name": "T21H19.70", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GXR2-1", "protein_name": "Probable polyol transporter 6", "gene_name": "PLT6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LBI9-1", "protein_name": "Sugar transporter ERD6-like 16", "gene_name": "F17K4.90", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93YP9-1", "protein_name": "Sugar transporter ERD6-like 4", "gene_name": "F18O14.22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O65413-1", "protein_name": "Sugar transport protein 12", "gene_name": "STP12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LPQ8-1", "protein_name": "Monosaccharide-sensing protein 2", "gene_name": "MSSP2; TMT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZ80-1", "protein_name": "Polyol transporter 5", "gene_name": "PLT5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZR6-1", "protein_name": "Inositol transporter 1", "gene_name": "INT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96290-1", "protein_name": "Monosaccharide-sensing protein 1", "gene_name": "MSSP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C757-1", "protein_name": "Probable inositol transporter 2", "gene_name": "INT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FRL3-1", "protein_name": "Sugar transporter ERD6-like 6", "gene_name": "F22H5.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LNV3-1", "protein_name": "Sugar transport protein 2", "gene_name": "STP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZQP6-1", "protein_name": "Probable inositol transporter 3", "gene_name": "INT3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LT15-1", "protein_name": "Sugar transport protein 10", "gene_name": "STP10", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GXK5", "url": "https://www.uniprot.org/uniprotkb/Q8GXK5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16923188", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 53 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Is trehalose-6-phosphate a regulator of sugar metabolism in plants?", "journal": "J. Exp. Bot.", "date": "2003", "authors": "Eastmond Peter J, Li Yi, Graham Ian A", "reference": { "type": "PubMed", "id": "12508064", "url": "https://pubmed.ncbi.nlm.nih.gov/12508064" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GWG2-1", "protein_name": "Probable trehalose-phosphate phosphatase H", "gene_name": "TPPH", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q67XC9-1", "protein_name": "Probable trehalose-phosphate phosphatase D", "gene_name": "TPPD", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64896-1", "protein_name": "Trehalose-phosphate phosphatase A", "gene_name": "TPPA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SU39-1", "protein_name": "Probable trehalose-phosphate phosphatase F", "gene_name": "TPPF", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SUW0-1", "protein_name": "Probable trehalose-phosphate phosphatase G", "gene_name": "TPPG", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9S4-1", "protein_name": "Trehalose-phosphate phosphatase B", "gene_name": "TPPB", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q5HZ05-1", "protein_name": "Probable trehalose-phosphate phosphatase J", "gene_name": "TPPJ", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q67X99-1", "protein_name": "Probable trehalose-phosphate phosphatase E", "gene_name": "TPPE", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I1A6-1", "protein_name": "Probable trehalose-phosphate phosphatase C", "gene_name": "TPPC", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4KFG5-1", "protein_name": "Probable trehalose-phosphate phosphatase I", "gene_name": "TPPI", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GWG2", "url": "https://www.uniprot.org/uniprotkb/Q8GWG2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12508064", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 10 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Trehalose mediated growth inhibition of Arabidopsis seedlings is due to trehalose-6-phosphate accumulation.", "journal": "Plant Physiol.", "date": "2004", "authors": "Schluepmann Henriette, van Dijken Anja, Aghdasi Mahnaz, Wobbes Barry, Paul Matthew, Smeekens Sjef", "reference": { "type": "PubMed", "id": "15181209", "url": "https://pubmed.ncbi.nlm.nih.gov/15181209" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GWG2-1", "protein_name": "Probable trehalose-phosphate phosphatase H", "gene_name": "TPPH", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q67XC9-1", "protein_name": "Probable trehalose-phosphate phosphatase D", "gene_name": "TPPD", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64896-1", "protein_name": "Trehalose-phosphate phosphatase A", "gene_name": "TPPA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SU39-1", "protein_name": "Probable trehalose-phosphate phosphatase F", "gene_name": "TPPF", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SUW0-1", "protein_name": "Probable trehalose-phosphate phosphatase G", "gene_name": "TPPG", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9S4-1", "protein_name": "Trehalose-phosphate phosphatase B", "gene_name": "TPPB", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q5HZ05-1", "protein_name": "Probable trehalose-phosphate phosphatase J", "gene_name": "TPPJ", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q67X99-1", "protein_name": "Probable trehalose-phosphate phosphatase E", "gene_name": "TPPE", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I1A6-1", "protein_name": "Probable trehalose-phosphate phosphatase C", "gene_name": "TPPC", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4KFG5-1", "protein_name": "Probable trehalose-phosphate phosphatase I", "gene_name": "TPPI", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23617-1", "protein_name": "Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5", "gene_name": "TPS5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SU50-1", "protein_name": "Trehalase", "gene_name": "TRE1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYM4-1", "protein_name": "Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1", "gene_name": "TPS1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GWG2", "url": "https://www.uniprot.org/uniprotkb/Q8GWG2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15181209", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 13 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { 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U.S.A.", "date": "2008", "authors": "Azevedo Jacinthe, Courtois Florence, Hakimi Mohamed-Ali, Demarsy Emilie, Lagrange Thierry, Alcaraz Jean-Pierre, Jaiswal Pankaj, Mar\u00e9chal-Drouard Laurence, Lerbs-Mache Silva", "reference": { "type": "PubMed", "id": "18567673", "url": "https://pubmed.ncbi.nlm.nih.gov/18567673" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GT75-1", "protein_name": "NEP1-interacting protein 1", "gene_name": "ATL26; NIP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LFV6-1", "protein_name": "DNA-directed RNA polymerase 2, chloroplastic/mitochondrial", "gene_name": "RPOT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GT74-1", "protein_name": "NEP1-interacting protein 2", "gene_name": "NIP2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GT75", "url": "https://www.uniprot.org/uniprotkb/Q8GT75" } 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"sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis phyllotaxis is controlled by the methyl-esterification status of cell-wall pectins.", "journal": "Current biology : CB", "date": "2008-12-23", "authors": "Peaucelle Alexis, Louvet Romain, Johansen Jorunn N, H\u00f6fte Herman, Laufs Patrick, Pelloux J\u00e9rome, Mouille Gr\u00e9gory", "reference": { "type": "PubMed", "id": "19097903", "url": "https://pubmed.ncbi.nlm.nih.gov/19097903" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84WE4-1", "protein_name": "Pectinesterase inhibitor 3", "gene_name": "PMEI3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84WE4", "url": "https://www.uniprot.org/uniprotkb/Q84WE4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19097903", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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Val\u00e9rie, Domon Jean-Marc, Martin Marjolaine, S\u00e9n\u00e9chal Fabien, Peaucelle Alexis, Pelloux J\u00e9r\u00f4me, H\u00f6fte Herman", "reference": { "type": "PubMed", "id": "36147700", "url": "https://pubmed.ncbi.nlm.nih.gov/36147700" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84WE4-1", "protein_name": "Pectinesterase inhibitor 3", "gene_name": "PMEI3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49006-1", "protein_name": "Pectinesterase/pectinesterase inhibitor 3", "gene_name": "PME3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84WE4", "url": "https://www.uniprot.org/uniprotkb/Q84WE4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.36147700", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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Cell Biol.", "date": "2005", "authors": "Vincent Patrick, Chua Michael, Nogue Fabien, Fairbrother Ashley, Mekeel Hal, Xu Yue, Allen Nina, Bibikova Tatiana N, Gilroy Simon, Bankaitis Vytas A", "reference": { "type": "PubMed", "id": "15728190", "url": "https://pubmed.ncbi.nlm.nih.gov/15728190" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GXC6-1", "protein_name": "Phosphatidylinositol/phosphatidylcholine transfer protein SFH5", "gene_name": "SFH5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HP88-1", "protein_name": "Phosphatidylinositol/phosphatidylcholine transfer protein SFH4", "gene_name": "SFH4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IHJ0-1", "protein_name": "Phosphatidylinositol/phosphatidylcholine transfer protein SFH8", "gene_name": "SFH8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIW3-1", "protein_name": "Phosphatidylinositol/phosphatidylcholine transfer protein SFH7", "gene_name": "SFH7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SI13-1", "protein_name": "Phosphatidylinositol/phosphatidylcholine transfer protein SFH10", "gene_name": "SFH10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q501H5-1", "protein_name": "Phosphatidylinositol/phosphatidylcholine transfer protein SFH13", "gene_name": "SFH13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93ZE9-1", "protein_name": "Phosphatidylinositol/phosphatidylcholine transfer protein SFH3", "gene_name": "SFH3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94A34-1", "protein_name": "Phosphatidylinositol/phosphatidylcholine transfer protein SFH12", "gene_name": "SFH12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J7S8-1", "protein_name": "Phosphatidylinositol/phosphatidylcholine transfer protein SFH9", "gene_name": "SFH9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JVA6-1", "protein_name": "Phosphatidylinositol/phosphatidylcholine transfer protein SFH6", "gene_name": "SFH6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JVA9-1", "protein_name": "Phosphatidylinositol/phosphatidylcholine transfer protein SFH2", "gene_name": "SEC14; SFH2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JYJ3-1", "protein_name": "Phosphatidylinositol/phosphatidylcholine transfer protein SFH11", "gene_name": "MNJ7.10; SFH11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K6D3-1", "protein_name": "Phosphatidylinositol/phosphatidylcholine transfer protein SFH14", "gene_name": "MDA7.22; SFH14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JLE5-1", "protein_name": "Phosphatidylinositol/phosphatidylcholine transfer protein SFH1", "gene_name": "SFH1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GXC6", "url": "https://www.uniprot.org/uniprotkb/Q8GXC6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15728190", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 14 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Phosphatidylinositol transfer proteins and cellular nanoreactors for lipid signaling.", "journal": "Nat. Chem. Biol.", "date": "2006", "authors": "Ile Kristina E, Schaaf Gabriel, Bankaitis Vytas A", "reference": { "type": "PubMed", "id": "17051233", "url": "https://pubmed.ncbi.nlm.nih.gov/17051233" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GXC6-1", "protein_name": "Phosphatidylinositol/phosphatidylcholine transfer protein SFH5", "gene_name": "SFH5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HP88-1", "protein_name": "Phosphatidylinositol/phosphatidylcholine transfer protein SFH4", "gene_name": "SFH4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IHJ0-1", "protein_name": "Phosphatidylinositol/phosphatidylcholine transfer protein SFH8", "gene_name": "SFH8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIW3-1", "protein_name": "Phosphatidylinositol/phosphatidylcholine transfer protein SFH7", "gene_name": "SFH7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SI13-1", "protein_name": "Phosphatidylinositol/phosphatidylcholine transfer protein SFH10", "gene_name": "SFH10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q501H5-1", "protein_name": "Phosphatidylinositol/phosphatidylcholine transfer protein SFH13", "gene_name": "SFH13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93ZE9-1", "protein_name": "Phosphatidylinositol/phosphatidylcholine transfer protein SFH3", "gene_name": "SFH3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94A34-1", "protein_name": "Phosphatidylinositol/phosphatidylcholine transfer protein SFH12", "gene_name": "SFH12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J7S8-1", "protein_name": "Phosphatidylinositol/phosphatidylcholine transfer protein SFH9", "gene_name": "SFH9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JVA6-1", "protein_name": "Phosphatidylinositol/phosphatidylcholine transfer protein SFH6", "gene_name": "SFH6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JVA9-1", "protein_name": "Phosphatidylinositol/phosphatidylcholine transfer protein SFH2", "gene_name": "SEC14; SFH2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JYJ3-1", "protein_name": "Phosphatidylinositol/phosphatidylcholine transfer protein SFH11", "gene_name": "MNJ7.10; SFH11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K6D3-1", "protein_name": "Phosphatidylinositol/phosphatidylcholine transfer protein SFH14", "gene_name": "MDA7.22; SFH14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JLE5-1", "protein_name": "Phosphatidylinositol/phosphatidylcholine transfer protein SFH1", "gene_name": "SFH1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GXC6", "url": "https://www.uniprot.org/uniprotkb/Q8GXC6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17051233", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 14 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Nitrate transporters and peptide transporters.", "journal": "FEBS Lett.", "date": "2007", "authors": "Tsay Yi-Fang, Chiu Chi-Chou, Tsai Chyn-Bey, Ho Cheng-Hsun, Hsu Po-Kai", "reference": { "type": "PubMed", "id": "17481610", "url": "https://pubmed.ncbi.nlm.nih.gov/17481610" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84WG0-1", "protein_name": "Protein NRT1/ PTR FAMILY 8.4", "gene_name": "NPF8.4; 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NPF31", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZY4-1", "protein_name": "Protein NRT1/ PTR FAMILY 6.2", "gene_name": "NPF6.2; NPF62", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FM20-1", "protein_name": "Protein NRT1/ PTR FAMILY 4.7", "gene_name": "MQB2.30; NPF4.7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FNL8-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.3", "gene_name": "NPF5.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LFR1-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.8", "gene_name": "NPF5.8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSE8-1", "protein_name": "Protein NRT1/ PTR FAMILY 4.2", "gene_name": "NPF4.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSF0-1", "protein_name": "Protein NRT1/ PTR FAMILY 4.1", "gene_name": "NPF4.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LYD5-1", "protein_name": "Protein NRT1/ PTR FAMILY 1.3", "gene_name": "NPF1.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LYR6-1", "protein_name": "Protein NRT1/ PTR FAMILY 6.1", "gene_name": "NPF6.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1E1-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.6", "gene_name": "NPF2.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SK99-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.15", "gene_name": "NPF5.15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M171-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.1", "gene_name": "NPF2.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M174-1", "protein_name": "Putative protein NRT1/ PTR FAMILY 2.2", "gene_name": "NPF2.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1I2-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.4", "gene_name": "NPF5.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M331-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.7", "gene_name": "NPF5.7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRI2-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.9", "gene_name": "NPF5.9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WP01-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.10", "gene_name": "NPF5.10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WSZ6-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.13", "gene_name": "NPF5.13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93Z20-1", "protein_name": "Protein NRT1/ PTR FAMILY 8.5", "gene_name": "NPF8.5; NPF85", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3E8X3-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.8", "gene_name": "FST1; NPF2.8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3E9B5-1", "protein_name": "Protein NRT1/ PTR FAMILY 7.1", "gene_name": "NPF7.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LPL2-1", "protein_name": "Protein NRT1/ PTR FAMILY 1.1", "gene_name": "NPF1.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LFB8-1", "protein_name": "Protein NRT1/ PTR FAMILY 8.2", "gene_name": "NPF8.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LMZ9-1", "protein_name": "High-affinity nitrate transporter 2.2", "gene_name": "NRT2.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LPV5-1", "protein_name": "High affinity nitrate transporter 2.5", "gene_name": "NRT2.5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M817-1", "protein_name": "Protein NRT1/ PTR FAMILY 1.2", "gene_name": "NPF1.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M9V7-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.9", "gene_name": "NPF2.9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VYE4-1", "protein_name": "Protein NRT1/ PTR FAMILY 4.5", "gene_name": "NPF4.5; NPF45", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RX67-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.11", "gene_name": "NPF5.11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93VV5-1", "protein_name": "Protein NRT1/ PTR FAMILY 4.3", "gene_name": "NPF4.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q56XQ6-1", "protein_name": "Protein NRT1/ PTR FAMILY 4.4", "gene_name": "NPF4.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZE2-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.14", "gene_name": "NPF5.14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZR7-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.1", "gene_name": "NPF5.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CAR9-1", "protein_name": "Putative protein NRT1/ PTR FAMILY 2.14", "gene_name": "NPF2.14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0CI03-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.6", "gene_name": "NPF5.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80436-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.5", "gene_name": "NPF5.5; NPF55", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H157-1", "protein_name": "Protein NRT1/ PTR FAMILY 4.6", "gene_name": "NPF4.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RX77-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.13", "gene_name": "NPF2.13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q944G5-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.10", "gene_name": "NPF2.10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82811-1", "protein_name": "High-affinity nitrate transporter 2.1", "gene_name": "NRT2.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P46032-1", "protein_name": "Protein NRT1/ PTR FAMILY 8.3", "gene_name": "NPF8.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q05085-1", "protein_name": "Protein NRT1/ PTR FAMILY 6.3", "gene_name": "NPF6.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXH0-1", "protein_name": "High affinity nitrate transporter 2.6", "gene_name": "NRT2.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LFX9-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.12", "gene_name": "NPF2.12; NPF212", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FNL7-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.2", "gene_name": "NPF5.2; NPF52", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LQL2-1", "protein_name": "Protein NRT1/ PTR FAMILY 7.3", "gene_name": "NPF7.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GXN2-1", "protein_name": "Protein NRT1/ PTR FAMILY 7.2", "gene_name": "NPF7.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C7U1-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.12", "gene_name": "NPF5.12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJH7-1", "protein_name": "High affinity nitrate transporter 2.3", "gene_name": "NRT2.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJH8-1", "protein_name": "High affinity nitrate transporter 2.4", "gene_name": "NRT2.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1E2-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.7", "gene_name": "NPF2.7; NPF27", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M390-1", "protein_name": "Protein NRT1/ PTR FAMILY 8.1", "gene_name": "NPF8.1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84WG0", "url": "https://www.uniprot.org/uniprotkb/Q84WG0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17481610", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 60 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Arabidopsis nitrate transporter NRT1.8 functions in nitrate removal from the xylem sap and mediates cadmium tolerance.", "journal": "Plant Cell", "date": "2010", "authors": "Li Jian-Yong, Fu Yan-Lei, Pike Sharon M, Bao Juan, Tian Wang, Zhang Yu, Chen Chun-Zhu, Zhang Yi, Li Hong-Mei, Huang Jing, Li Le-Gong, Schroeder Julian I, Gassmann Walter, Gong Ji-Ming", "reference": { "type": "PubMed", "id": "20501909", "url": "https://pubmed.ncbi.nlm.nih.gov/20501909" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84WG0-1", "protein_name": "Protein NRT1/ PTR FAMILY 8.4", "gene_name": "NPF8.4; NPF84", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LVE0-1", "protein_name": "Protein NRT1/ PTR FAMILY 6.4", "gene_name": "NPF6.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M172-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.5", "gene_name": "NPF2.5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M173-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.4", "gene_name": "NPF2.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M175-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.3", "gene_name": "NPF2.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SK96-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.16", "gene_name": "NPF5.16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LV10-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.11", "gene_name": "NPF2.11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SX20-1", "protein_name": "Protein NRT1/ PTR FAMILY 3.1", "gene_name": "NPF3.1; NPF31", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZY4-1", "protein_name": "Protein NRT1/ PTR FAMILY 6.2", "gene_name": "NPF6.2; NPF62", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FM20-1", "protein_name": "Protein NRT1/ PTR FAMILY 4.7", "gene_name": "MQB2.30; NPF4.7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LFR1-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.8", "gene_name": "NPF5.8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSE8-1", "protein_name": "Protein NRT1/ PTR FAMILY 4.2", "gene_name": "NPF4.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSF0-1", "protein_name": "Protein NRT1/ PTR FAMILY 4.1", "gene_name": "NPF4.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LYD5-1", "protein_name": "Protein NRT1/ PTR FAMILY 1.3", "gene_name": "NPF1.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LYR6-1", "protein_name": "Protein NRT1/ PTR FAMILY 6.1", "gene_name": "NPF6.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1E1-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.6", "gene_name": "NPF2.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SK99-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.15", "gene_name": "NPF5.15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M171-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.1", "gene_name": "NPF2.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M174-1", "protein_name": "Putative protein NRT1/ PTR FAMILY 2.2", "gene_name": "NPF2.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1I2-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.4", "gene_name": "NPF5.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M331-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.7", "gene_name": "NPF5.7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRI2-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.9", "gene_name": "NPF5.9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WP01-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.10", "gene_name": "NPF5.10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WSZ6-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.13", "gene_name": "NPF5.13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93Z20-1", "protein_name": "Protein NRT1/ PTR FAMILY 8.5", "gene_name": "NPF8.5; NPF85", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3E8X3-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.8", "gene_name": "FST1; NPF2.8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3E9B5-1", "protein_name": "Protein NRT1/ PTR FAMILY 7.1", "gene_name": "NPF7.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LPL2-1", "protein_name": "Protein NRT1/ PTR FAMILY 1.1", "gene_name": "NPF1.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M9V7-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.9", "gene_name": "NPF2.9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VYE4-1", "protein_name": "Protein NRT1/ PTR FAMILY 4.5", "gene_name": "NPF4.5; NPF45", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RX67-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.11", "gene_name": "NPF5.11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93VV5-1", "protein_name": "Protein NRT1/ PTR FAMILY 4.3", "gene_name": "NPF4.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3EAQ5-1", "protein_name": "Probable peptide/nitrate transporter At3g43790", "gene_name": "ZIFL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q56XQ6-1", "protein_name": "Protein NRT1/ PTR FAMILY 4.4", "gene_name": "NPF4.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZE2-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.14", "gene_name": "NPF5.14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZR7-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.1", "gene_name": "NPF5.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CAR9-1", "protein_name": "Putative protein NRT1/ PTR FAMILY 2.14", "gene_name": "NPF2.14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0CI03-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.6", "gene_name": "NPF5.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80436-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.5", "gene_name": "NPF5.5; NPF55", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H157-1", "protein_name": "Protein NRT1/ PTR FAMILY 4.6", "gene_name": "NPF4.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RX77-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.13", "gene_name": "NPF2.13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q944G5-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.10", "gene_name": "NPF2.10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LFX9-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.12", "gene_name": "NPF2.12; NPF212", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LQL2-1", "protein_name": "Protein NRT1/ PTR FAMILY 7.3", "gene_name": "NPF7.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GXN2-1", "protein_name": "Protein NRT1/ PTR FAMILY 7.2", "gene_name": "NPF7.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C7U1-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.12", "gene_name": "NPF5.12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1E2-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.7", "gene_name": "NPF2.7; NPF27", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84WG0", "url": "https://www.uniprot.org/uniprotkb/Q84WG0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.20501909", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 47 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A unified nomenclature of NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER family members in plants.", "journal": "Trends Plant Sci.", "date": "2014", "authors": "L\u00e9ran Sophie, Varala Kranthi, Boyer Jean-Christophe, Chiurazzi Maurizio, Crawford Nigel, Daniel-Vedele Fran\u00e7oise, David Laure, Dickstein Rebecca, Fernandez Emilio, Forde Brian, Gassmann Walter, Geiger Dietmar, Gojon Alain, Gong Ji-Ming, Halkier Barbara A, Harris Jeanne M, Hedrich Rainer, Limami Anis M, Rentsch Doris, Seo Mitsunori, Tsay Yi-Fang, Zhang Mingyong, Coruzzi Gloria, Lacombe Beno\u00eet", "reference": { "type": "PubMed", "id": "24055139", "url": "https://pubmed.ncbi.nlm.nih.gov/24055139" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84WG0-1", "protein_name": "Protein NRT1/ PTR FAMILY 8.4", "gene_name": "NPF8.4; NPF84", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LVE0-1", "protein_name": "Protein NRT1/ PTR FAMILY 6.4", "gene_name": "NPF6.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M172-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.5", "gene_name": "NPF2.5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M173-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.4", "gene_name": "NPF2.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M175-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.3", "gene_name": "NPF2.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SK96-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.16", "gene_name": "NPF5.16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LV10-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.11", "gene_name": "NPF2.11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SX20-1", "protein_name": "Protein NRT1/ PTR FAMILY 3.1", "gene_name": "NPF3.1; NPF31", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZY4-1", "protein_name": "Protein NRT1/ PTR FAMILY 6.2", "gene_name": "NPF6.2; NPF62", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FM20-1", "protein_name": "Protein NRT1/ PTR FAMILY 4.7", "gene_name": "MQB2.30; NPF4.7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FNL8-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.3", "gene_name": "NPF5.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LFR1-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.8", "gene_name": "NPF5.8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSE8-1", "protein_name": "Protein NRT1/ PTR FAMILY 4.2", "gene_name": "NPF4.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSF0-1", "protein_name": "Protein NRT1/ PTR FAMILY 4.1", "gene_name": "NPF4.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LYD5-1", "protein_name": "Protein NRT1/ PTR FAMILY 1.3", "gene_name": "NPF1.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LYR6-1", "protein_name": "Protein NRT1/ PTR FAMILY 6.1", "gene_name": "NPF6.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1E1-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.6", "gene_name": "NPF2.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SK99-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.15", "gene_name": "NPF5.15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M171-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.1", "gene_name": "NPF2.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M174-1", "protein_name": "Putative protein NRT1/ PTR FAMILY 2.2", "gene_name": "NPF2.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1I2-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.4", "gene_name": "NPF5.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M331-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.7", "gene_name": "NPF5.7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRI2-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.9", "gene_name": "NPF5.9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WP01-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.10", "gene_name": "NPF5.10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WSZ6-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.13", "gene_name": "NPF5.13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93Z20-1", "protein_name": "Protein NRT1/ PTR FAMILY 8.5", "gene_name": "NPF8.5; NPF85", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3E8X3-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.8", "gene_name": "FST1; NPF2.8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3E9B5-1", "protein_name": "Protein NRT1/ PTR FAMILY 7.1", "gene_name": "NPF7.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LPL2-1", "protein_name": "Protein NRT1/ PTR FAMILY 1.1", "gene_name": "NPF1.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LFB8-1", "protein_name": "Protein NRT1/ PTR FAMILY 8.2", "gene_name": "NPF8.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M817-1", "protein_name": "Protein NRT1/ PTR FAMILY 1.2", "gene_name": "NPF1.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M9V7-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.9", "gene_name": "NPF2.9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VYE4-1", "protein_name": "Protein NRT1/ PTR FAMILY 4.5", "gene_name": "NPF4.5; NPF45", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RX67-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.11", "gene_name": "NPF5.11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93VV5-1", "protein_name": "Protein NRT1/ PTR FAMILY 4.3", "gene_name": "NPF4.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q56XQ6-1", "protein_name": "Protein NRT1/ PTR FAMILY 4.4", "gene_name": "NPF4.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZE2-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.14", "gene_name": "NPF5.14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZR7-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.1", "gene_name": "NPF5.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CAR9-1", "protein_name": "Putative protein NRT1/ PTR FAMILY 2.14", "gene_name": "NPF2.14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0CI03-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.6", "gene_name": "NPF5.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80436-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.5", "gene_name": "NPF5.5; NPF55", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H157-1", "protein_name": "Protein NRT1/ PTR FAMILY 4.6", "gene_name": "NPF4.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RX77-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.13", "gene_name": "NPF2.13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q944G5-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.10", "gene_name": "NPF2.10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P46032-1", "protein_name": "Protein NRT1/ PTR FAMILY 8.3", "gene_name": "NPF8.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q05085-1", "protein_name": "Protein NRT1/ PTR FAMILY 6.3", "gene_name": "NPF6.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LFX9-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.12", "gene_name": "NPF2.12; NPF212", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FNL7-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.2", "gene_name": "NPF5.2; NPF52", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LQL2-1", "protein_name": "Protein NRT1/ PTR FAMILY 7.3", "gene_name": "NPF7.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GXN2-1", "protein_name": "Protein NRT1/ PTR FAMILY 7.2", "gene_name": "NPF7.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C7U1-1", "protein_name": "Protein NRT1/ PTR FAMILY 5.12", "gene_name": "NPF5.12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1E2-1", "protein_name": "Protein NRT1/ PTR FAMILY 2.7", "gene_name": "NPF2.7; NPF27", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M390-1", "protein_name": "Protein NRT1/ PTR FAMILY 8.1", "gene_name": "NPF8.1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84WG0", "url": "https://www.uniprot.org/uniprotkb/Q84WG0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.24055139", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 53 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A cell plate-specific callose synthase and its interaction with phragmoplastin.", "journal": "Plant Cell", "date": "2001", "authors": "Hong Z, Delauney A J, Verma D P", "reference": { "type": "PubMed", "id": "11283334", "url": "https://pubmed.ncbi.nlm.nih.gov/11283334" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LUD7-1", "protein_name": "Putative callose synthase 8", "gene_name": "CALS8; GSL04", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXT9-1", "protein_name": "Callose synthase 3", "gene_name": "CALS3; GSL12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LYS6-1", "protein_name": "Putative callose synthase 6", "gene_name": "CALS6; GSL11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SL03-1", "protein_name": "Callose synthase 2", "gene_name": "CALS2; GSL03", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9AUE0-1", "protein_name": "Callose synthase 1", "gene_name": "CALS1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S9U0-1", "protein_name": "Callose synthase 11", "gene_name": "CALS11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SHJ3-1", "protein_name": "Callose synthase 7", "gene_name": "CALS7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZT82-1", "protein_name": "Callose synthase 12", "gene_name": "CALS12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTG5-1", "protein_name": "Callose synthase 4", "gene_name": "CALS4; GSL09", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3B724-1", "protein_name": "Callose synthase 5", "gene_name": "CALS5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SFU6-1", "protein_name": "Callose synthase 9", "gene_name": "CALS9; GSL10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJM0-1", "protein_name": "Callose synthase 10", "gene_name": "CALS10", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LUD7", "url": "https://www.uniprot.org/uniprotkb/Q9LUD7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11283334", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 12 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Two callose synthases, GSL1 and GSL5, play an essential and redundant role in plant and pollen development and in fertility.", "journal": "Plant Mol. Biol.", "date": "2005", "authors": "Enns Linda C, Kanaoka Masahiro M, Torii Keiko U, Comai Luca, Okada Kiyotaka, Cleland Robert E", "reference": { "type": "PubMed", "id": "16021399", "url": "https://pubmed.ncbi.nlm.nih.gov/16021399" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LUD7-1", "protein_name": "Putative callose synthase 8", "gene_name": "CALS8; GSL04", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXT9-1", "protein_name": "Callose synthase 3", "gene_name": "CALS3; GSL12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LYS6-1", "protein_name": "Putative callose synthase 6", "gene_name": "CALS6; GSL11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SL03-1", "protein_name": "Callose synthase 2", "gene_name": "CALS2; GSL03", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9AUE0-1", "protein_name": "Callose synthase 1", "gene_name": "CALS1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S9U0-1", "protein_name": "Callose synthase 11", "gene_name": "CALS11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SHJ3-1", "protein_name": "Callose synthase 7", "gene_name": "CALS7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZT82-1", "protein_name": "Callose synthase 12", "gene_name": "CALS12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTG5-1", "protein_name": "Callose synthase 4", "gene_name": "CALS4; GSL09", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3B724-1", "protein_name": "Callose synthase 5", "gene_name": "CALS5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SFU6-1", "protein_name": "Callose synthase 9", "gene_name": "CALS9; GSL10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJM0-1", "protein_name": "Callose synthase 10", "gene_name": "CALS10", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LUD7", "url": "https://www.uniprot.org/uniprotkb/Q9LUD7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16021399", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 12 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Ethylene-dependent and -independent pathways controlling floral abscission are revealed to converge using promoter::reporter gene constructs in the ida abscission mutant.", "journal": "J. Exp. Bot.", "date": "2006", "authors": "Butenko Melinka A, Stenvik Grethe-Elisabeth, Alm Vibeke, Saether Barbro, Patterson Sara E, Aalen Reidunn B", "reference": { "type": "PubMed", "id": "16990374", "url": "https://pubmed.ncbi.nlm.nih.gov/16990374" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GWJ4-1", "protein_name": "Protein OSB3, chloroplastic/mitochondrial", "gene_name": "OSB3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LAD7-1", "protein_name": "Protein IDA", "gene_name": "IDA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GXH3-1", "protein_name": "Protein OSB2, chloroplastic", "gene_name": "OSB2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GWJ4", "url": "https://www.uniprot.org/uniprotkb/Q8GWJ4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16990374", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The plant-specific ssDNA binding protein OSB1 is involved in the stoichiometric transmission of mitochondrial DNA in Arabidopsis.", "journal": "Plant Cell", "date": "2006", "authors": "Zaegel Vincent, Guermann Beno\u00eet, Le Ret Monique, Andr\u00e9s Charles, Meyer Denise, Erhardt Mathieu, Canaday Jean, Gualberto Jos\u00e9 M, Imbault Patrice", "reference": { "type": "PubMed", "id": "17189341", "url": "https://pubmed.ncbi.nlm.nih.gov/17189341" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GWJ4-1", "protein_name": "Protein OSB3, chloroplastic/mitochondrial", "gene_name": "OSB3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FYJ2-1", "protein_name": "Protein OSB4, chloroplastic", "gene_name": "OSB4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GXH3-1", "protein_name": "Protein OSB2, chloroplastic", "gene_name": "OSB2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SX99-1", "protein_name": "Protein OSB1, mitochondrial", "gene_name": "OSB1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GWJ4", "url": 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Constitutive expression exposes functional redundancy between the Arabidopsis histone H2A gene HTA1 and other H2A gene family members.", "journal": "Plant Cell", "date": "2006", "authors": "Yi HoChul, Sardesai Nagesh, Fujinuma Toshinori, Chan Chien-Wei, Veena , Gelvin Stanton B", "reference": { "type": "PubMed", "id": "16751347", "url": "https://pubmed.ncbi.nlm.nih.gov/16751347" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LZ46-1", "protein_name": "Probable histone H2A.4", "gene_name": "HTA12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S9K7-1", "protein_name": "Probable histone H2AXb", "gene_name": "T22H22.12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SII0-1", "protein_name": "Probable histone H2A variant 2", "gene_name": "F13I13.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81826-1", "protein_name": "Probable histone H2A.3", "gene_name": "M4I22.40", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T0H7-1", "protein_name": "Histone H2A.8", "gene_name": "HTA4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94F49-1", "protein_name": "Probable histone H2A.5", "gene_name": "F15A18.130", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C681-1", "protein_name": "Probable histone H2A.1", "gene_name": "F23H24.9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04848-1", "protein_name": "Probable histone H2AXa", "gene_name": "F7G19.24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23628-1", "protein_name": "Histone H2A variant 1", "gene_name": "H2AV", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJE8-1", "protein_name": "Probable histone H2A.7", "gene_name": "MMN10.22; MMN10_90", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LD28-1", "protein_name": "Histone H2A.6", "gene_name": "RAT5", "tax_name": 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H2B.7", "gene_name": "F16L2.240", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LHQ5-1", "protein_name": "Probable histone H2A.2", "gene_name": "F3H11.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCJ9-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 26", "gene_name": "UBP26", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LZ46", "url": "https://www.uniprot.org/uniprotkb/Q9LZ46" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 115, "end_pos": 115, "sequence_org": "C", "sequence_mut": "S", "comment": "Loss of activity.", "evidence": [ { "database": "UniProtKB", "id": "Q9SCJ9", "url": "https://www.uniprot.org/uniprotkb/Q9SCJ9" }, { "database": "PubMed", "id": "17554311", "url": "https://pubmed.ncbi.nlm.nih.gov/17554311" } ], 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{ "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Genome-wide cloning and sequence analysis of leucine-rich repeat receptor-like protein kinase genes in Arabidopsis thaliana.", "journal": "BMC Genomics", "date": "2010", "authors": "Gou Xiaoping, He Kai, Yang Hui, Yuan Tong, Lin Honghui, Clouse Steven D, Li Jia", "reference": { "type": "PubMed", "id": "20064227", "url": "https://pubmed.ncbi.nlm.nih.gov/20064227" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84MA9-1", "protein_name": "Inactive leucine-rich repeat receptor-like serine/threonine-protein kinase At1g60630", "gene_name": "F8A5.15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LVN2-1", "protein_name": "Probably inactive leucine-rich repeat receptor-like protein kinase At5g58150", "gene_name": "MCK7.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94F62-1", "protein_name": "BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1", "gene_name": "BAK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K6B8-1", "protein_name": "Leucine-rich repeat receptor-like serine/threonine-protein kinase RGI4", "gene_name": "RGI4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": 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"uniprot_canonical_ac": "Q9FN93-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At5g59680", "gene_name": "MTH12.14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FYK0-1", "protein_name": "Receptor-like kinase TMK2", "gene_name": "TMK2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FZ59-1", "protein_name": "Leucine-rich repeat receptor-like protein kinase PEPR2", "gene_name": "PEPR2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LFS4-1", "protein_name": "Protein CLAVATA3 INSENSITIVE RECEPTOR KINASE 5", "gene_name": "CIK5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJF3-1", "protein_name": "Receptor-like protein kinase BRI1-like 3", "gene_name": "BRL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LPT1-1", "protein_name": "Pollen receptor-like kinase 5", "gene_name": "PRK5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LRT1-1", "protein_name": "Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040", "gene_name": "MMG15.21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSI9-1", "protein_name": "Inactive LRR receptor-like serine/threonine-protein kinase BIR2", "gene_name": "BIR2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LT96-1", "protein_name": "Probable leucine-rich repeat receptor-like protein kinase At5g49770", "gene_name": "K2I5.14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZV7-1", "protein_name": "Leucine-rich repeat receptor-like protein kinase PXC2", "gene_name": "PXC2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M0G7-1", "protein_name": "MDIS1-interacting receptor like kinase 1", "gene_name": "MIK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M2Z1-1", "protein_name": "Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM2", "gene_name": "BAM2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M9C5-1", "protein_name": "Probable leucine-rich repeat receptor-like protein kinase At1g68400", "gene_name": "T2E12.5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M9S4-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At1g14390", "gene_name": "F14L17.16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIT1-1", "protein_name": "Receptor-like kinase TMK3", "gene_name": "TMK3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SKB2-1", "protein_name": "Leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1", "gene_name": "SOBIR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SKG5-1", "protein_name": "Somatic embryogenesis receptor kinase 4", "gene_name": "SERK4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZWC8-1", "protein_name": "Serine/threonine-protein kinase BRI1-like 1", "gene_name": "BRL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGG4-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At1g51860", "gene_name": "T14L22.7; T14L22_7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGH2-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At1g56130", "gene_name": "F14G9.25; T6H22.8; T6H22_8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGD7-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At1g06840", "gene_name": "F4H5.8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGG7-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At1g53420", "gene_name": "F12M16.30", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGG9-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At1g53440", "gene_name": "T3F20.24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGH3-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At1g56140", "gene_name": "F14G9.24; T6H22.8.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGP4-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At3g47570", "gene_name": "F1P2.120", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGX1-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At5g65240", "gene_name": "MQN23.19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22938-1", "protein_name": "Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3", "gene_name": "PXC3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGK4-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At2g16250", "gene_name": "F16F14.25; F16F14_25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGI2-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At1g67720", "gene_name": "F12A21.30", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ASQ6-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At1g29720", "gene_name": "RFK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHK7-1", "protein_name": "Probable leucine-rich repeat receptor-like protein kinase At5g05160", "gene_name": "K2A11.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FZB8-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At1g51810", "gene_name": "F19C24.1; T14L22.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCT4-1", "protein_name": "Probably inactive leucine-rich repeat receptor-like protein kinase IMK2", "gene_name": "IMK2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SGP2-1", "protein_name": "Receptor-like protein kinase HSL1", "gene_name": "HSL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49318-1", "protein_name": "Probable leucine-rich repeat receptor-like protein kinase At2g33170", "gene_name": "F25I18.9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZU46-1", "protein_name": "Receptor protein kinase-like protein ZAR1", "gene_name": "ZAR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGT5-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At5g16900", "gene_name": "LEAF AND FLOWER RELATED", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGV0-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At5g48740", "gene_name": "K24G6.7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84JQ4-1", "protein_name": "Pollen receptor-like kinase 2", "gene_name": "PRK2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GZ99-1", "protein_name": "Leucine-rich repeat receptor protein kinase HPCA1", "gene_name": "HPCA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LFN2-1", "protein_name": "Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770", "gene_name": "F20H23.20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LY03-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase IRK", "gene_name": "IRK", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ASS4-1", "protein_name": "Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380", "gene_name": "K23F3.10; MJE7.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XIC7-1", "protein_name": "Somatic embryogenesis receptor kinase 2", "gene_name": "SERK2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FGL5-1", "protein_name": "Receptor protein-tyrosine kinase CEPR1", "gene_name": "CEPR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FK63-1", "protein_name": "Calmodulin-binding receptor kinase CaMRLK", "gene_name": "CAMRLK", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LIG2-1", "protein_name": "Receptor-like protein kinase At3g21340", "gene_name": "MHC9.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FXF2-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase RFK1", "gene_name": "RKF1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FN94-1", "protein_name": "Receptor-like protein kinase At5g59670", "gene_name": "MTH12.12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FRS6-1", "protein_name": "Leucine-rich repeat receptor-like protein kinase PXL1", "gene_name": "PXL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LK43-1", "protein_name": "Receptor-like kinase TMK4", "gene_name": "TMK4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LP24-1", "protein_name": "Probable leucine-rich repeat receptor-like protein kinase At1g35710", "gene_name": "F14D7.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9N5-1", "protein_name": "Probable inactive leucine-rich repeat receptor-like protein kinase At1g66830", "gene_name": "F4N21.23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FZB1-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At1g51880", "gene_name": "RHS6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P47735-1", "protein_name": "Receptor-like protein kinase 5", "gene_name": "RLK5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3E991-1", "protein_name": "Pollen receptor-like kinase 6", "gene_name": "PRK6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RY65-1", "protein_name": "Protein CLAVATA3 INSENSITIVE RECEPTOR KINASE 6", "gene_name": "CIK6; NIK2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C7T7-1", "protein_name": "Receptor protein-tyrosine kinase CEPR2", "gene_name": "CEPR2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FII5-1", "protein_name": "Leucine-rich repeat receptor-like protein kinase TDR", "gene_name": "TDR", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGR6-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At4g29180", "gene_name": "RHS16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGP9-1", "protein_name": "Probable leucine-rich repeat receptor-like protein kinase IMK3", "gene_name": "IMK3; MRLK", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGP2-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase MEE39", "gene_name": "MEE39", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGF5-1", "protein_name": "LRR receptor-like serine/threonine-protein kinase RGI5", "gene_name": "RGI5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGE0-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At1g07650", "gene_name": "DSI-1VOC", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGE4-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At1g12460", "gene_name": "F5O11.21; F5O11_21; T12C24.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGG6-1", "protein_name": "Probable LRR receptor-like protein kinase At1g51890", "gene_name": "T14L22.10; T14L22_10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGJ9-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At2g02780", "gene_name": "T20F6.8; T20F6_8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGQ7-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At4g20450", "gene_name": "F9F13.100; F9F13_100", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGW2-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase PAM74", "gene_name": "MTH12.9; PAM74", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGU5-1", "protein_name": "Protein CLAVATA3 INSENSITIVE RECEPTOR KINASE 4", "gene_name": "CIK4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGU1-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At5g37450", "gene_name": "T25O11.15; T25O11_15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGL4-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At2g28960", "gene_name": "T9I4.4; T9I4_4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGD9-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At1g07560", "gene_name": "F22G5.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGF4-1", "protein_name": "LRR receptor-like serine/threonine-protein kinase FEI 1", "gene_name": "FEI1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGG8-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At1g53430", "gene_name": "NILR2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGH8-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At1g63430", "gene_name": "F2K11.19; F2K11_19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGI5-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At1g69990", "gene_name": "F20P5.27", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGJ1-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At1g74360", "gene_name": "F1M20.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGL9-1", "protein_name": "LRR receptor-like serine/threonine-protein kinase FEI 2", "gene_name": "FEI2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGN2-1", "protein_name": "Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840", "gene_name": "LRR-RLK", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGQ4-1", "protein_name": "Protein MALE DISCOVERER 2", "gene_name": "MDIS2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGQ5-1", "protein_name": "LRR receptor-like serine/threonine-protein kinase GSO1", "gene_name": "GSO1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGQ9-1", "protein_name": "LRR receptor-like serine/threonine-protein kinase GHR1", "gene_name": "GHR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGR3-1", "protein_name": "LRR receptor-like serine/threonine-protein kinase RGI3", "gene_name": "RGI3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGR9-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At4g31250", "gene_name": "F8F16.70", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGS2-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At4g36180", "gene_name": "F23E13.70", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGS3-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At4g37250", "gene_name": "AP22.22; C7A10.110", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGT1-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At5g10290", "gene_name": "F18D22.60", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGT6-1", "protein_name": "LRR receptor-like serine/threonine-protein kinase EFR", "gene_name": "EFR", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGU0-1", "protein_name": "Pollen receptor-like kinase 1", "gene_name": "PRK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGU7-1", "protein_name": "Protein MALE DISCOVERER 1", "gene_name": "MDIS1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGV1-1", "protein_name": "LRR receptor-like serine/threonine-protein kinase RGI2", "gene_name": "RGI2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGW6-1", "protein_name": "LRR receptor-like serine/threonine-protein kinase ERL1", "gene_name": "ERL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGX3-1", "protein_name": "LRR receptor-like serine/threonine-protein kinase HSL2", "gene_name": "HSL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I2N7-1", "protein_name": "Receptor-like protein kinase 7", "gene_name": "RLK7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93ZS4-1", "protein_name": "Protein CLAVATA3 INSENSITIVE RECEPTOR KINASE 1", "gene_name": "CIK1; NIK3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJY0-1", "protein_name": "Pollen receptor-like kinase 4", "gene_name": "PRK4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7I6-1", "protein_name": "LRR receptor-like serine/threonine-protein kinase RPK2", "gene_name": "RPK2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZRF9-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase RPK1", "gene_name": "RPK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LPS5-1", "protein_name": "Somatic embryogenesis receptor kinase 5", "gene_name": "SERK5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WVM4-1", "protein_name": "Protein CLAVATA3 INSENSITIVE RECEPTOR KINASE 2", "gene_name": "CIK2; CLERK", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZQR3-1", "protein_name": "Leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14510", "gene_name": "T13P21.11; T13P21_11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W4S5-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At5g63710", "gene_name": "MBK5.19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6XAT2-1", "protein_name": "LRR receptor-like serine/threonine-protein kinase ERL2", "gene_name": "ERL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LVP0-1", "protein_name": "Probable leucine-rich repeat receptor-like protein kinase At5g63930", "gene_name": "MBM17.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSL9-1", "protein_name": "Leucine-rich repeat receptor-like protein kinase PEPR1", "gene_name": "PEPR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGD6-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At1g05700", "gene_name": "F3F20.15; F3F20_15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGG3-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At1g51820", "gene_name": "SIF4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGD8-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At1g07550", "gene_name": "F22G5.7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGK9-1", "protein_name": "Probable LRR receptor-like serine/threonine-protein kinase At2g24230", "gene_name": "F27D4.14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LYN8-1", "protein_name": "Leucine-rich repeat receptor protein kinase EMS1", "gene_name": "EMS1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1L7-1", "protein_name": "Pollen receptor-like kinase 3", "gene_name": "PRK3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJQ1-1", "protein_name": "Leucine-rich repeat receptor-like protein kinase PXC1", "gene_name": "PXC1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84MA9", "url": "https://www.uniprot.org/uniprotkb/Q84MA9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.20064227", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 129 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A novel gene family in Arabidopsis encoding putative heptahelical transmembrane proteins homologous to human adiponectin receptors and progestin receptors.", "journal": "J. Exp. Bot.", "date": "2005", "authors": "Hsieh Ming-Hsiun, Goodman Howard M", "reference": { "type": "PubMed", "id": "16263907", "url": "https://pubmed.ncbi.nlm.nih.gov/16263907" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84N34-1", "protein_name": "Heptahelical transmembrane protein 2", "gene_name": "HHP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZG0-1", "protein_name": "Heptahelical transmembrane protein 4", "gene_name": "HHP4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVF3-1", "protein_name": "Heptahelical transmembrane protein 5", "gene_name": "HHP5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZUH8-1", "protein_name": "Heptahelical transmembrane protein 3", "gene_name": "HHP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93ZH9-1", "protein_name": "Heptahelical transmembrane protein 1", "gene_name": "HHP1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84N34", "url": "https://www.uniprot.org/uniprotkb/Q84N34" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16263907", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis contains a large superfamily of acyl-activating enzymes. Phylogenetic and biochemical analysis reveals a new class of acyl-coenzyme a synthetases.", "journal": "Plant Physiol.", "date": "2003", "authors": "Shockey Jay M, Fulda Martin S, Browse John", "reference": { "type": "PubMed", "id": "12805634", "url": "https://pubmed.ncbi.nlm.nih.gov/12805634" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84P25-1", "protein_name": "4-coumarate--CoA ligase-like 2", "gene_name": "4CLL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LPK6-1", "protein_name": "Probable acyl-activating enzyme 9", "gene_name": "AEE9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LQS1-1", "protein_name": "Probable acyl-activating enzyme 8", "gene_name": "AAE8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HUK6-1", "protein_name": "Butanoate--CoA ligase AAE1", "gene_name": "AAE1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SFW5-1", "protein_name": "Probable acyl-activating enzyme 21", "gene_name": "AEE21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SS00-1", "protein_name": "Probable acyl-activating enzyme 12, peroxisomal", "gene_name": "AAE12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CAP8-1", "protein_name": "Long chain acyl-CoA synthetase 9, chloroplastic", "gene_name": "LACS9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SS01-1", "protein_name": "Benzoate--CoA ligase, peroxisomal", "gene_name": "AAE20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T009-1", "protein_name": "Long chain acyl-CoA synthetase 5", "gene_name": "LACS5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q42524-1", "protein_name": "4-coumarate--CoA ligase 1", "gene_name": "4CL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W471-1", "protein_name": "Long-chain-fatty-acid--[acyl-carrier-protein] ligase AEE15, chloroplastic", "gene_name": "AAE15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SEY5-1", "protein_name": "Isovalerate--CoA ligase AAE2", "gene_name": "AAE2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJD4-1", "protein_name": "Long chain acyl-CoA synthetase 8", "gene_name": "LACS8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T0A0-1", "protein_name": "Long chain acyl-CoA synthetase 4", "gene_name": "LACS4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4KBF3-1", "protein_name": "Probable acyl-activating enzyme 17, peroxisomal", "gene_name": "AAE17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0C5B6-1", "protein_name": "OPC-6:CoA ligase", "gene_name": "4CLL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3E6Y4-1", "protein_name": "4-coumarate--CoA ligase-like 3", "gene_name": "4CLL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9G2-1", "protein_name": "Probable acyl-activating enzyme 22", "gene_name": "AEE22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFE6-1", "protein_name": "Probable acyl-activating enzyme 5, peroxisomal", "gene_name": "AAE5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFE9-1", "protein_name": "Probable acyl-activating enzyme 6", "gene_name": "AAE6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80658-1", "protein_name": "Probable acyl-activating enzyme 4", "gene_name": "AEE4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VYJ1-1", "protein_name": "2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal", "gene_name": "AAE14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84P21-1", "protein_name": "Peroxisomal OPC-8:0-CoA ligase 1", "gene_name": "4CLL5; OPCL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84P23-1", "protein_name": "4-coumarate--CoA ligase-like 9", "gene_name": "4CLL9; AITR6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84P24-1", "protein_name": "4-coumarate--CoA ligase-like 6", "gene_name": "4CLL6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H151-1", "protein_name": "Malonate--CoA ligase", "gene_name": "AAE13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LKS5-1", "protein_name": "Long chain acyl-CoA synthetase 7, peroxisomal", "gene_name": "LACS7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LPS1-1", "protein_name": "Long chain acyl-CoA synthetase 6, peroxisomal", "gene_name": "LACS6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZF1-1", "protein_name": "Acetate/butyrate--CoA ligase AAE7, peroxisomal", "gene_name": "AAE7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LQ12-1", "protein_name": "4-coumarate--CoA ligase-like 1", "gene_name": "4CLL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84P26-1", "protein_name": "4-coumarate--CoA ligase-like 8", "gene_name": "4CL8; 4CLL8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84P17-1", "protein_name": "Probable acyl-activating enzyme 18, peroxisomal", "gene_name": "AAE18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C7W4-1", "protein_name": "Long chain acyl-CoA synthetase 3", "gene_name": "LACS3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8D4-1", "protein_name": "Butyrate--CoA ligase AAE11, peroxisomal", "gene_name": "AAE11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LK39-1", "protein_name": "Probable acyl-activating enzyme 16, chloroplastic", "gene_name": "AAE16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LPK7-1", "protein_name": "Probable acyl-activating enzyme 10", "gene_name": "AEE10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "B9DGD6-1", "protein_name": "Acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal", "gene_name": "ACS", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22898-1", "protein_name": "Long chain acyl-CoA synthetase 1", "gene_name": "LACS1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LU36-1", "protein_name": "4-coumarate--CoA ligase 4", "gene_name": "4CL4; 4CL5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S725-1", "protein_name": "4-coumarate--CoA ligase 2", "gene_name": "4CL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S777-1", "protein_name": "4-coumarate--CoA ligase 3", "gene_name": "4CL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M0X9-1", "protein_name": "4-coumarate--CoA ligase-like 7", "gene_name": "4CLL7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XIA9-1", "protein_name": "Long chain acyl-CoA synthetase 2", "gene_name": "LACS2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84P25", "url": "https://www.uniprot.org/uniprotkb/Q84P25" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12805634", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 43 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The substrate specificity-determining amino acid code of 4-coumarate:CoA ligase.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "2003", "authors": "Schneider Katja, H\u00f6vel Klaus, Witzel Kilian, Hamberger Bj\u00f6rn, Schomburg Dietmar, Kombrink Erich, Stuible Hans-Peter", "reference": { "type": "PubMed", "id": "12819348", "url": "https://pubmed.ncbi.nlm.nih.gov/12819348" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84P25-1", "protein_name": "4-coumarate--CoA ligase-like 2", "gene_name": "4CLL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q42524-1", "protein_name": "4-coumarate--CoA ligase 1", "gene_name": "4CL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SMT7-1", "protein_name": "Oxalate--CoA ligase", "gene_name": "AAE3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0C5B6-1", "protein_name": "OPC-6:CoA ligase", "gene_name": "4CLL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3E6Y4-1", "protein_name": "4-coumarate--CoA ligase-like 3", "gene_name": "4CLL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84P21-1", "protein_name": "Peroxisomal OPC-8:0-CoA ligase 1", "gene_name": "4CLL5; OPCL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84P23-1", "protein_name": "4-coumarate--CoA ligase-like 9", "gene_name": "4CLL9; AITR6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84P24-1", "protein_name": "4-coumarate--CoA ligase-like 6", "gene_name": "4CLL6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LQ12-1", "protein_name": "4-coumarate--CoA ligase-like 1", "gene_name": "4CLL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84P26-1", "protein_name": "4-coumarate--CoA ligase-like 8", "gene_name": "4CL8; 4CLL8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LU36-1", "protein_name": "4-coumarate--CoA ligase 4", "gene_name": "4CL4; 4CL5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S725-1", "protein_name": "4-coumarate--CoA ligase 2", "gene_name": "4CL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S777-1", "protein_name": "4-coumarate--CoA ligase 3", "gene_name": "4CL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M0X9-1", "protein_name": "4-coumarate--CoA ligase-like 7", "gene_name": "4CLL7", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84P25", "url": "https://www.uniprot.org/uniprotkb/Q84P25" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 293, "end_pos": 293, "sequence_org": "M", "sequence_mut": "A", "comment": "Affects the substrate specificity.", "evidence": [ { "database": "UniProtKB", "id": "Q9S725", "url": "https://www.uniprot.org/uniprotkb/Q9S725" }, { "database": "PubMed", "id": "11323416", "url": "https://pubmed.ncbi.nlm.nih.gov/11323416" }, { "database": "PubMed", "id": "12819348", "url": "https://pubmed.ncbi.nlm.nih.gov/12819348" } ], "uniprot_canonical_ac": "Q9S725-1" }, { "start_pos": 293, "end_pos": 293, "sequence_org": "M", "sequence_mut": "P", "comment": "Affects the substrate specificity.", "evidence": [ { "database": "UniProtKB", "id": "Q9S725", "url": "https://www.uniprot.org/uniprotkb/Q9S725" }, { "database": "PubMed", "id": "11323416", "url": "https://pubmed.ncbi.nlm.nih.gov/11323416" }, { "database": "PubMed", "id": "12819348", "url": "https://pubmed.ncbi.nlm.nih.gov/12819348" } ], "uniprot_canonical_ac": "Q9S725-1" }, { "start_pos": 320, "end_pos": 320, "sequence_org": "K", "sequence_mut": "A", "comment": "Affects the substrate specificity.", "evidence": [ { "database": "UniProtKB", "id": "Q9S725", "url": "https://www.uniprot.org/uniprotkb/Q9S725" }, { "database": "PubMed", "id": "12819348", "url": "https://pubmed.ncbi.nlm.nih.gov/12819348" }, { "database": "PubMed", "id": "11323416", "url": "https://pubmed.ncbi.nlm.nih.gov/11323416" } ], "uniprot_canonical_ac": "Q9S725-1" }, { "start_pos": 320, "end_pos": 320, "sequence_org": "K", "sequence_mut": "L", "comment": "Affects the substrate specificity.", "evidence": [ { "database": "UniProtKB", "id": "Q9S725", "url": "https://www.uniprot.org/uniprotkb/Q9S725" }, { "database": "PubMed", "id": "12819348", "url": "https://pubmed.ncbi.nlm.nih.gov/12819348" }, { "database": "PubMed", "id": "11323416", "url": "https://pubmed.ncbi.nlm.nih.gov/11323416" } ], "uniprot_canonical_ac": "Q9S725-1" } ], "record_id": "pubmed.12819348", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 14 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular analysis of 10 coding regions from Arabidopsis that are homologous to the MUR3 xyloglucan galactosyltransferase.", "journal": "Plant Physiol.", "date": "2004", "authors": "Li Xuemei, Cordero Israel, Caplan Jeffrey, M\u00f8lh\u00f8j Michael, Reiter Wolf-Dieter", "reference": { "type": "PubMed", "id": "15020758", "url": "https://pubmed.ncbi.nlm.nih.gov/15020758" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84R16-1", "protein_name": "Probable xyloglucan galactosyltransferase GT14", "gene_name": "GT14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K6F1-1", "protein_name": "Xyloglucan galactosyltransferase XLT2", "gene_name": "XLT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SUW1-1", "protein_name": "Probable xyloglucan galactosyltransferase GT19", "gene_name": "GT19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48842-1", "protein_name": "Probable xyloglucan galactosyltransferase GT12", "gene_name": "GT12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81072-1", "protein_name": "Probable xyloglucan galactosyltransferase GT11", "gene_name": "GT11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48843-1", "protein_name": "Probable xyloglucan galactosyltransferase GT13", "gene_name": "GT13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q5XF04-1", "protein_name": "Probable xyloglucan galactosyltransferase GT15", "gene_name": "GT15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q7XJ98-1", "protein_name": "Xyloglucan galactosyltransferase MUR3", "gene_name": "MUR3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CA34-1", "protein_name": "Probable xyloglucan galactosyltransferase GT17", "gene_name": "GT17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHD8-1", "protein_name": "Probable xyloglucan galactosyltransferase GT20", "gene_name": "GT20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SH31-1", "protein_name": "Xyloglucan-specific galacturonosyltransferase 1", "gene_name": "GT16", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84R16", "url": "https://www.uniprot.org/uniprotkb/Q84R16" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15020758", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 11 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity.", "journal": "Mol. Biol. Evol.", "date": "2003", "authors": "Heim Marc A, Jakoby Marc, Werber Martin, Martin Cathie, Weisshaar Bernd, Bailey Paul C", "reference": { "type": "PubMed", "id": "12679534", "url": "https://pubmed.ncbi.nlm.nih.gov/12679534" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84RD0-1", "protein_name": "Transcription factor bHLH53", "gene_name": "BHLH53", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GT73-1", "protein_name": "Transcription factor bHLH119", "gene_name": "BHLH119", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXA9-1", "protein_name": "Transcription factor bHLH61", "gene_name": "BHLH61", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRT2-1", "protein_name": "Transcription factor bHLH62", "gene_name": "BHLH62; CIB3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M0X8-1", "protein_name": "Transcription factor bHLH114", "gene_name": "BHLH114", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVU6-1", "protein_name": "Transcription factor bHLH23", "gene_name": "BHLH23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9STJ7-1", "protein_name": "Transcription factor bHLH118", "gene_name": "BHLH118", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVU7-1", "protein_name": "Putative transcription factor bHLH056", "gene_name": "BHLH56", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7Y1-1", "protein_name": "Transcription factor bHLH30", "gene_name": "BHLH30", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SA82-1", "protein_name": "Transcription factor bHLH52", "gene_name": "BHLH52", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SFZ3-1", "protein_name": "Transcription factor bHLH110", "gene_name": "BHLH110", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSL1-1", "protein_name": "Transcription factor bHLH93", "gene_name": "BHLH93", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LUK7-1", "protein_name": "Transcription factor bHLH28", "gene_name": "BHLH28", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0JXE7-1", "protein_name": "Transcription factor BPE", "gene_name": "BPE", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3EAI1-1", "protein_name": "Transcription factor bHLH60", "gene_name": "BHLH60", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZVX2-1", "protein_name": "Transcription factor ABORTED MICROSPORES", "gene_name": "AMS", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A4D998-1", "protein_name": "Transcription factor bHLH75", "gene_name": "BHLH75", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M0R0-1", "protein_name": "Transcription factor bHLH81", "gene_name": "BHLH81", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LQ08-1", "protein_name": "Transcription factor bHLH125", "gene_name": "BHLH125", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22768-1", "protein_name": "Transcription factor UNE12", "gene_name": "UNE12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CAD0-1", "protein_name": "Transcription factor EGL1", "gene_name": "BHLH2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FUA4-1", "protein_name": "Transcription factor SPATULA", "gene_name": "SPT", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LNJ5-1", "protein_name": "Transcription factor bHLH13", "gene_name": "BHLH13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81900-1", "protein_name": "Transcription factor DYT1", "gene_name": "DYT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93Y00-1", "protein_name": "Transcription factor bHLH7", "gene_name": "BHLH7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8P8-1", "protein_name": "Transcription factor bHLH80", "gene_name": "BHLH80; FBH1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C670-1", "protein_name": "Transcription factor bHLH76", "gene_name": "BHLH76; CIB5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1PF16-1", "protein_name": "Transcription factor bHLH19", "gene_name": "BHLH19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W2F1-1", "protein_name": "Transcription factor MYC1", "gene_name": "ATMYC1; BHLH12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHA7-1", "protein_name": "Transcription factor HEC1", "gene_name": "HEC1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9STJ6-1", "protein_name": "Transcription factor bHLH126", "gene_name": "BHLH126", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T072-1", "protein_name": "Transcription factor bHLH25", "gene_name": "BHLH25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZW81-1", "protein_name": "Transcription factor bHLH129", "gene_name": "BHLH129", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XEF0-1", "protein_name": "Transcription factor bHLH51", "gene_name": "BHLH51", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q7XHI7-1", "protein_name": "Transcription factor bHLH127", "gene_name": "BHLH127", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L467-1", "protein_name": "Transcription factor bHLH104", "gene_name": "BHLH104", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W2F2-1", "protein_name": "Transcription factor bHLH11", "gene_name": "BHLH11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S3F1-1", "protein_name": "Transcription factor NAI1", "gene_name": "NAI1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZ22-1", "protein_name": "Transcription factor bHLH103", "gene_name": "BHLH103", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CAA9-1", "protein_name": "Transcription factor bHLH49", "gene_name": "BHLH49", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHA2-1", "protein_name": "Transcription factor ALC", "gene_name": "ALC", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LT23-1", "protein_name": "Transcription factor bHLH121", "gene_name": "BHLH121", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTC7-1", "protein_name": "Transcription factor bHLH34", "gene_name": "BHLH34", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJL4-1", "protein_name": "Transcription factor bHLH78", "gene_name": "BHLH78; CIB2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LND0-1", "protein_name": "Transcription factor bHLH89", "gene_name": "BHLH89", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZPW3-1", "protein_name": "Transcription factor HBI1", "gene_name": "HBI1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZ02-1", "protein_name": "Transcription factor bHLH48", "gene_name": "BHLH48; MHK10.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C682-1", "protein_name": "Transcription factor bHLH115", "gene_name": "BHLH115", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZVB5-1", "protein_name": "Transcription factor bHLH100", "gene_name": "BHLH100", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81037-1", "protein_name": "Transcription factor bHLH70", "gene_name": "BHLH70; MYC70", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80674-1", "protein_name": "Transcription factor bHLH106", "gene_name": "BHLH106", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q700E3-1", "protein_name": "Transcription factor bHLH27", "gene_name": "BHLH27", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q2HIV9-1", "protein_name": "Transcription factor bHLH35", "gene_name": "BHLH35; MUL3.10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZPY8-1", "protein_name": "Transcription factor ABA-INDUCIBLE bHLH-TYPE", "gene_name": "AIB", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0CB25-1", "protein_name": "Transcription factor bHLH131", "gene_name": "BHLH131", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q700C7-1", "protein_name": "Transcription factor SPEECHLESS", "gene_name": "SPCH", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q5XVH0-1", "protein_name": "Transcription factor bHLH109", "gene_name": "BHLH109", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L5W7-1", "protein_name": "Transcription factor PIF6", "gene_name": "PIF6; PIL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L5W8-1", "protein_name": "Transcription factor PIL1", "gene_name": "PIL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S3D1-1", "protein_name": "Transcription factor bHLH68", "gene_name": "BHLH68", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S3D5-1", "protein_name": "Transcription factor LRL2", "gene_name": "LRL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GZ38-1", "protein_name": "Transcription factor UNE10", "gene_name": "UNE10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GWK7-1", "protein_name": "Transcription factor BEE 3", "gene_name": "BEE3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84LH8-1", "protein_name": "Transcription factor PIF5", "gene_name": "PIF5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84WK0-1", "protein_name": "Transcription factor RSL2", "gene_name": "RSL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GY61-1", "protein_name": "Transcription factor bHLH63", "gene_name": "BHLH63", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LEG1-1", "protein_name": "Transcription factor RSL3", "gene_name": "RSL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W2F3-1", "protein_name": "Transcription factor PIF4", "gene_name": "PIF4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSE2-1", "protein_name": "Transcription factor ICE1", "gene_name": "ICE1; SCRM", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIP9-1", "protein_name": "Transcription factor MYC3", "gene_name": "MYC3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49687-1", "protein_name": "Transcription factor MYC4", "gene_name": "MYC4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80536-1", "protein_name": "Transcription factor PIF3", "gene_name": "PIF3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81313-1", "protein_name": "Transcription factor IND", "gene_name": "IND", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FN69-1", "protein_name": "Transcription factor GLABRA 3", "gene_name": "GL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FE22-1", "protein_name": "Transcription factor HFR1", "gene_name": "HFR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GZM7-1", "protein_name": "Transcription factor PIF1", "gene_name": "PIF1; PIL5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H102-1", "protein_name": "Transcription factor bHLH128", "gene_name": "BHLH128", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXD8-1", "protein_name": "Transcription factor HEC3", "gene_name": "HEC3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M128-1", "protein_name": "Transcription factor bHLH57", "gene_name": "BHLH57", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SN74-1", "protein_name": "Transcription factor bHLH47", "gene_name": "BHLH47", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SND4-1", "protein_name": "Transcription factor HEC2", "gene_name": "HEC2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23090-1", "protein_name": "Transcription factor bHLH14", "gene_name": "BHLH14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23487-1", "protein_name": "Transcription factor bHLH3", "gene_name": "BHLH3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S3D2-1", "protein_name": "Transcription factor bHLH87", "gene_name": "BHLH87", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C690-1", "protein_name": "Transcription factor bHLH122", "gene_name": "BHLH122", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C707-1", "protein_name": "Transcription factor RHD6", "gene_name": "RHD6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CAA4-1", "protein_name": "Transcription factor BIM2", "gene_name": "BIM2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FH37-1", "protein_name": "Transcription factor ILR3", "gene_name": "ILR3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJ00-1", "protein_name": "Putative transcription factor bHLH086", "gene_name": "RSL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FT81-1", "protein_name": "Transcription factor TT8", "gene_name": "TT8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FXA3-1", "protein_name": "Transcription factor bHLH95", "gene_name": "BHLH95", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LS08-1", "protein_name": "Transcription factor AIG1", "gene_name": "BHLH32", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSQ3-1", "protein_name": "Transcription factor LRL3", "gene_name": "LRL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LV17-1", "protein_name": "Transcription factor bHLH79", "gene_name": "BHLH79", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GXT3-1", "protein_name": "Transcription factor bHLH123", "gene_name": "BHLH123", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q700E4-1", "protein_name": "Transcription factor bHLH67", "gene_name": "BHLH67; MYC67", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WNR2-1", "protein_name": "Transcription factor bHLH90", "gene_name": "BHLH90", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84TK1-1", "protein_name": "Transcription factor bHLH10", "gene_name": "BHLH010; BHLH10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q7XHI9-1", "protein_name": "Transcription factor bHLH84", "gene_name": "BHLH84", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GX46-1", "protein_name": "Transcription factor bHLH91", "gene_name": "BHLH91", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLI0-1", "protein_name": "Transcription factor bHLH120", "gene_name": "BHLH120; MIO24.8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LT67-1", "protein_name": "Transcription factor bHLH113", "gene_name": "BHLH113", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FYJ6-1", "protein_name": "Transcription factor bHLH111", "gene_name": "BHLH111", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTS4-1", "protein_name": "Putative transcription factor bHLH041", "gene_name": "BHLH41; MHM17.7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLI1-1", "protein_name": "Transcription factor bHLH36", "gene_name": "BHLH36; BHLH", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKQ6-1", "protein_name": "Transcription factor bHLH99", "gene_name": "BHLH99; MNA5.5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LET0-1", "protein_name": "Putative transcription factor bHLH107", "gene_name": "BHLH107", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FRI0-1", "protein_name": "Transcription factor MEE8", "gene_name": "MEE8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LN95-1", "protein_name": "Transcription factor bHLH55", "gene_name": "BHLH55", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LRJ4-1", "protein_name": "Transcription factor bHLH117", "gene_name": "BHLH117", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1PF17-1", "protein_name": "Transcription factor bHLH18", "gene_name": "BHLH18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39204-1", "protein_name": "Transcription factor MYC2", "gene_name": "MYC2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q56YJ8-1", "protein_name": "Transcription factor FAMA", "gene_name": "FAMA; FMA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LPW3-1", "protein_name": "Transcription factor SCREAM2", "gene_name": "SCRM2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SK91-1", "protein_name": "Transcription factor bHLH94", "gene_name": "BHLH094; BHLH94", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q66GR3-1", "protein_name": "Transcription factor bHLH130", "gene_name": "BHLH130; FBH4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FYE6-1", "protein_name": "Transcription factor bHLH101", "gene_name": "BHLH101", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q56XR0-1", "protein_name": "Transcription factor bHLH71", "gene_name": "BHLH071; BHLH71", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q570R7-1", "protein_name": "Transcription factor PIF7", "gene_name": "BHLH72", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NKN9-1", "protein_name": "Transcription factor bHLH74", "gene_name": "BHLH74", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GZ13-1", "protein_name": "Transcription factor BEE 1", "gene_name": "BEE1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93VJ4-1", "protein_name": "Transcription factor BEE 2", "gene_name": "BEE2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1K0-1", "protein_name": "Transcription factor ORG3", "gene_name": "ORG3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1K1-1", "protein_name": "Transcription factor ORG2", "gene_name": "ORG2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C7T4-1", "protein_name": "Transcription factor bHLH96", "gene_name": "BHLH096; BHLH96", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94JL3-1", "protein_name": "Transcription factor bHLH112", "gene_name": "ATBHLH112; BHLH112", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0V7X4-1", "protein_name": "Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR", "gene_name": "FIT", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q7XHI5-1", "protein_name": "Transcription factor bHLH133", "gene_name": "BHLH133; UKTF1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LEZ3-1", "protein_name": "Transcription factor BIM1", "gene_name": "BIM1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIX5-1", "protein_name": "Transcription factor bHLH92", "gene_name": "BHLH92", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LK48-1", "protein_name": "Transcription factor bHLH77", "gene_name": "BHLH77", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M8K6-1", "protein_name": "Transcription factor MUTE", "gene_name": "MUTE", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZUG9-1", "protein_name": "Transcription factor LRL1", "gene_name": "LRL1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84RD0", "url": "https://www.uniprot.org/uniprotkb/Q84RD0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12679534", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 133 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Arabidopsis basic/helix-loop-helix transcription factor family.", "journal": "Plant Cell", "date": "2003", "authors": "Toledo-Ortiz Gabriela, Huq Enamul, Quail Peter H", "reference": { "type": "PubMed", "id": "12897250", "url": "https://pubmed.ncbi.nlm.nih.gov/12897250" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84RD0-1", "protein_name": "Transcription factor bHLH53", "gene_name": "BHLH53", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GT73-1", "protein_name": "Transcription factor bHLH119", "gene_name": "BHLH119", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXA9-1", "protein_name": "Transcription factor bHLH61", "gene_name": "BHLH61", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRT2-1", "protein_name": "Transcription factor bHLH62", "gene_name": "BHLH62; CIB3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M0X8-1", "protein_name": "Transcription factor bHLH114", "gene_name": "BHLH114", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVU6-1", "protein_name": "Transcription factor bHLH23", "gene_name": "BHLH23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9STJ7-1", "protein_name": "Transcription factor bHLH118", "gene_name": "BHLH118", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVU7-1", "protein_name": "Putative transcription factor bHLH056", "gene_name": "BHLH56", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7Y1-1", "protein_name": "Transcription factor bHLH30", "gene_name": "BHLH30", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SA82-1", "protein_name": "Transcription factor bHLH52", "gene_name": "BHLH52", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SFZ3-1", "protein_name": "Transcription factor bHLH110", "gene_name": "BHLH110", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSL1-1", "protein_name": "Transcription factor bHLH93", "gene_name": "BHLH93", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSN7-1", "protein_name": "Transcription factor bHLH147", "gene_name": "BHLH147", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LUK7-1", "protein_name": "Transcription factor bHLH28", "gene_name": "BHLH28", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0JXE7-1", "protein_name": "Transcription factor BPE", "gene_name": "BPE", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3EAI1-1", "protein_name": "Transcription factor bHLH60", "gene_name": "BHLH60", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FGB0-1", "protein_name": "Transcription factor bHLH145", "gene_name": "BHLH145", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZVX2-1", "protein_name": "Transcription factor ABORTED MICROSPORES", "gene_name": "AMS", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M041-1", "protein_name": "Transcription factor bHLH140", "gene_name": "APTX; BHLH140", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A4D998-1", "protein_name": "Transcription factor bHLH75", "gene_name": "BHLH75", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M0R0-1", "protein_name": "Transcription factor bHLH81", "gene_name": "BHLH81", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LQ08-1", "protein_name": "Transcription factor bHLH125", "gene_name": "BHLH125", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22768-1", "protein_name": "Transcription factor UNE12", "gene_name": "UNE12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22901-1", "protein_name": "Transcription factor UPBEAT1", "gene_name": "UPB1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80482-1", "protein_name": "Transcription factor bHLH149", "gene_name": "BHLH149", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CAD0-1", "protein_name": "Transcription factor EGL1", "gene_name": "BHLH2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FUA4-1", "protein_name": "Transcription factor SPATULA", "gene_name": "SPT", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LNJ5-1", "protein_name": "Transcription factor bHLH13", "gene_name": "BHLH13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81900-1", "protein_name": "Transcription factor DYT1", "gene_name": "DYT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93Y00-1", "protein_name": "Transcription factor bHLH7", "gene_name": "BHLH7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8P8-1", "protein_name": "Transcription factor bHLH80", "gene_name": "BHLH80; FBH1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C670-1", "protein_name": "Transcription factor bHLH76", "gene_name": "BHLH76; CIB5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1PF16-1", "protein_name": "Transcription factor bHLH19", "gene_name": "BHLH19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W2F1-1", "protein_name": "Transcription factor MYC1", "gene_name": "ATMYC1; BHLH12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMB6-1", "protein_name": "Transcription factor BIM3", "gene_name": "BIM3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHA7-1", "protein_name": "Transcription factor HEC1", "gene_name": "HEC1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9STJ6-1", "protein_name": "Transcription factor bHLH126", "gene_name": "BHLH126", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SUM5-1", "protein_name": "Transcription factor bHLH146", "gene_name": "BHLH146", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T072-1", "protein_name": "Transcription factor bHLH25", "gene_name": "BHLH25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZW81-1", "protein_name": "Transcription factor bHLH129", "gene_name": "BHLH129", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XEF0-1", "protein_name": "Transcription factor bHLH51", "gene_name": "BHLH51", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L467-1", "protein_name": "Transcription factor bHLH104", "gene_name": "BHLH104", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W2F2-1", "protein_name": "Transcription factor bHLH11", "gene_name": "BHLH11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93W88-1", "protein_name": "Transcription factor bHLH137", "gene_name": "BHLH137", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S3F1-1", "protein_name": "Transcription factor NAI1", "gene_name": "NAI1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZ22-1", "protein_name": "Transcription factor bHLH103", "gene_name": "BHLH103", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CAA9-1", "protein_name": "Transcription factor bHLH49", "gene_name": "BHLH49", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHA2-1", "protein_name": "Transcription factor ALC", "gene_name": "ALC", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LT23-1", "protein_name": "Transcription factor bHLH121", "gene_name": "BHLH121", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTC7-1", "protein_name": "Transcription factor bHLH34", "gene_name": "BHLH34", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJL4-1", "protein_name": "Transcription factor bHLH78", "gene_name": "BHLH78; CIB2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMF4-1", "protein_name": "Transcription factor SAC51", "gene_name": "SAC51", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LND0-1", "protein_name": "Transcription factor bHLH89", "gene_name": "BHLH89", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZPW3-1", "protein_name": "Transcription factor HBI1", "gene_name": "HBI1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZ02-1", "protein_name": "Transcription factor bHLH48", "gene_name": "BHLH48; MHK10.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C682-1", "protein_name": "Transcription factor bHLH115", "gene_name": "BHLH115", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ASX9-1", "protein_name": "Transcription factor bHLH144", "gene_name": "BHLH144", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZVB5-1", "protein_name": "Transcription factor bHLH100", "gene_name": "BHLH100", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81037-1", "protein_name": "Transcription factor bHLH70", "gene_name": "BHLH70; MYC70", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80674-1", "protein_name": "Transcription factor bHLH106", "gene_name": "BHLH106", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q700E3-1", "protein_name": "Transcription factor bHLH27", "gene_name": "BHLH27", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q2HIV9-1", "protein_name": "Transcription factor bHLH35", "gene_name": "BHLH35; MUL3.10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3E7L7-1", "protein_name": "Transcription factor bHLH139", "gene_name": "BHLH139", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZPY8-1", "protein_name": "Transcription factor ABA-INDUCIBLE bHLH-TYPE", "gene_name": "AIB", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q700C7-1", "protein_name": "Transcription factor SPEECHLESS", "gene_name": "SPCH", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L5W7-1", "protein_name": "Transcription factor PIF6", "gene_name": "PIF6; PIL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L5W8-1", "protein_name": "Transcription factor PIL1", "gene_name": "PIL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S3D1-1", "protein_name": "Transcription factor bHLH68", "gene_name": "BHLH68", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S3D5-1", "protein_name": "Transcription factor LRL2", "gene_name": "LRL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GZ38-1", "protein_name": "Transcription factor UNE10", "gene_name": "UNE10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GWK7-1", "protein_name": "Transcription factor BEE 3", "gene_name": "BEE3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84LH8-1", "protein_name": "Transcription factor PIF5", "gene_name": "PIF5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84WK0-1", "protein_name": "Transcription factor RSL2", "gene_name": "RSL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GY61-1", "protein_name": "Transcription factor bHLH63", "gene_name": "BHLH63", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LEG1-1", "protein_name": "Transcription factor RSL3", "gene_name": "RSL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W2F3-1", "protein_name": "Transcription factor PIF4", "gene_name": "PIF4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSE2-1", "protein_name": "Transcription factor ICE1", "gene_name": "ICE1; SCRM", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8Z9-1", "protein_name": "Transcription factor bHLH148", "gene_name": "BHLH148", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIP9-1", "protein_name": "Transcription factor MYC3", "gene_name": "MYC3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FY69-1", "protein_name": "Transcription factor bHLH143", "gene_name": "BHLH143", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49687-1", "protein_name": "Transcription factor MYC4", "gene_name": "MYC4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80536-1", "protein_name": "Transcription factor PIF3", "gene_name": "PIF3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81313-1", "protein_name": "Transcription factor IND", "gene_name": "IND", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FN69-1", "protein_name": "Transcription factor GLABRA 3", "gene_name": "GL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FE22-1", "protein_name": "Transcription factor HFR1", "gene_name": "HFR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GZM7-1", "protein_name": "Transcription factor PIF1", "gene_name": "PIF1; PIL5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H102-1", "protein_name": "Transcription factor bHLH128", "gene_name": "BHLH128", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXD8-1", "protein_name": "Transcription factor HEC3", "gene_name": "HEC3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M128-1", "protein_name": "Transcription factor bHLH57", "gene_name": "BHLH57", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SN74-1", "protein_name": "Transcription factor bHLH47", "gene_name": "BHLH47", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SND4-1", "protein_name": "Transcription factor HEC2", "gene_name": "HEC2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23090-1", "protein_name": "Transcription factor bHLH14", "gene_name": "BHLH14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23487-1", "protein_name": "Transcription factor bHLH3", "gene_name": "BHLH3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S3D2-1", "protein_name": "Transcription factor bHLH87", "gene_name": "BHLH87", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C690-1", "protein_name": "Transcription factor bHLH122", "gene_name": "BHLH122", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C707-1", "protein_name": "Transcription factor RHD6", "gene_name": "RHD6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CA64-1", "protein_name": "Transcription factor PRE3", "gene_name": "PRE3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CAA4-1", "protein_name": "Transcription factor BIM2", "gene_name": "BIM2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FH37-1", "protein_name": "Transcription factor ILR3", "gene_name": "ILR3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJ00-1", "protein_name": "Putative transcription factor bHLH086", "gene_name": "RSL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FT81-1", "protein_name": "Transcription factor TT8", "gene_name": "TT8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FXA3-1", "protein_name": "Transcription factor bHLH95", "gene_name": "BHLH95", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LS08-1", "protein_name": "Transcription factor AIG1", "gene_name": "BHLH32", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSQ3-1", "protein_name": "Transcription factor LRL3", "gene_name": "LRL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LV17-1", "protein_name": "Transcription factor bHLH79", "gene_name": "BHLH79", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXG5-1", "protein_name": "Transcription factor PRE2", "gene_name": "PRE2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GXT3-1", "protein_name": "Transcription factor bHLH123", "gene_name": "BHLH123", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q700E4-1", "protein_name": "Transcription factor bHLH67", "gene_name": "BHLH67; MYC67", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WNR2-1", "protein_name": "Transcription factor bHLH90", "gene_name": "BHLH90", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84TK1-1", "protein_name": "Transcription factor bHLH10", "gene_name": "BHLH010; BHLH10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GX46-1", "protein_name": "Transcription factor bHLH91", "gene_name": "BHLH91", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLI0-1", "protein_name": "Transcription factor bHLH120", "gene_name": "BHLH120; MIO24.8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LT67-1", "protein_name": "Transcription factor bHLH113", "gene_name": "BHLH113", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FYJ6-1", "protein_name": "Transcription factor bHLH111", "gene_name": "BHLH111", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTS4-1", "protein_name": "Putative transcription factor bHLH041", "gene_name": "BHLH41; MHM17.7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLI1-1", "protein_name": "Transcription factor bHLH36", "gene_name": "BHLH36; BHLH", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKQ6-1", "protein_name": "Transcription factor bHLH99", "gene_name": "BHLH99; MNA5.5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LET0-1", "protein_name": "Putative transcription factor bHLH107", "gene_name": "BHLH107", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FRI0-1", "protein_name": "Transcription factor MEE8", "gene_name": "MEE8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LN95-1", "protein_name": "Transcription factor bHLH55", "gene_name": "BHLH55", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LRJ4-1", "protein_name": "Transcription factor bHLH117", "gene_name": "BHLH117", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1PF17-1", "protein_name": "Transcription factor bHLH18", "gene_name": "BHLH18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39204-1", "protein_name": "Transcription factor MYC2", "gene_name": "MYC2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q56YJ8-1", "protein_name": "Transcription factor FAMA", "gene_name": "FAMA; FMA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LPW3-1", "protein_name": "Transcription factor SCREAM2", "gene_name": "SCRM2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SK91-1", "protein_name": "Transcription factor bHLH94", "gene_name": "BHLH094; BHLH94", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q66GR3-1", "protein_name": "Transcription factor bHLH130", "gene_name": "BHLH130; FBH4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FYE6-1", "protein_name": "Transcription factor bHLH101", "gene_name": "BHLH101", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q56XR0-1", "protein_name": "Transcription factor bHLH71", "gene_name": "BHLH071; BHLH71", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q570R7-1", "protein_name": "Transcription factor PIF7", "gene_name": "BHLH72", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NKN9-1", "protein_name": "Transcription factor bHLH74", "gene_name": "BHLH74", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GZ13-1", "protein_name": "Transcription factor BEE 1", "gene_name": "BEE1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93VJ4-1", "protein_name": "Transcription factor BEE 2", "gene_name": "BEE2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1K0-1", "protein_name": "Transcription factor ORG3", "gene_name": "ORG3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1K1-1", "protein_name": "Transcription factor ORG2", "gene_name": "ORG2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C7T4-1", "protein_name": "Transcription factor bHLH96", "gene_name": "BHLH096; BHLH96", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94JL3-1", "protein_name": "Transcription factor bHLH112", "gene_name": "ATBHLH112; BHLH112", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0V7X4-1", "protein_name": "Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR", "gene_name": "FIT", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LEZ3-1", "protein_name": "Transcription factor BIM1", "gene_name": "BIM1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIX5-1", "protein_name": "Transcription factor bHLH92", "gene_name": "BHLH92", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LK48-1", "protein_name": "Transcription factor bHLH77", "gene_name": "BHLH77", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M8K6-1", "protein_name": "Transcription factor MUTE", "gene_name": "MUTE", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M9L6-1", "protein_name": "Transcription factor bHLH150", "gene_name": "BHLH150", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZUG9-1", "protein_name": "Transcription factor LRL1", "gene_name": "LRL1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84RD0", "url": "https://www.uniprot.org/uniprotkb/Q84RD0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12897250", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 144 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Update on the basic helix-loop-helix transcription factor gene family in Arabidopsis thaliana.", "journal": "Plant Cell", "date": "2003", "authors": "Bailey Paul C, Martin Cathie, Toledo-Ortiz Gabriela, Quail Peter H, Huq Enamul, Heim Marc A, Jakoby Marc, Werber Martin, Weisshaar Bernd", "reference": { "type": "PubMed", "id": "14600211", "url": "https://pubmed.ncbi.nlm.nih.gov/14600211" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84RD0-1", "protein_name": "Transcription factor bHLH53", "gene_name": "BHLH53", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GT73-1", "protein_name": "Transcription factor bHLH119", "gene_name": "BHLH119", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXA9-1", "protein_name": "Transcription factor bHLH61", "gene_name": "BHLH61", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRT2-1", "protein_name": "Transcription factor bHLH62", "gene_name": "BHLH62; CIB3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M0X8-1", "protein_name": "Transcription factor bHLH114", "gene_name": "BHLH114", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVU6-1", "protein_name": "Transcription factor bHLH23", "gene_name": "BHLH23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9STJ7-1", "protein_name": "Transcription factor bHLH118", "gene_name": "BHLH118", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVU7-1", "protein_name": "Putative transcription factor bHLH056", "gene_name": "BHLH56", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7Y1-1", "protein_name": "Transcription factor bHLH30", "gene_name": "BHLH30", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SA82-1", "protein_name": "Transcription factor bHLH52", "gene_name": "BHLH52", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SFZ3-1", "protein_name": "Transcription factor bHLH110", "gene_name": "BHLH110", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSL1-1", "protein_name": "Transcription factor bHLH93", "gene_name": "BHLH93", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSN7-1", "protein_name": "Transcription factor bHLH147", "gene_name": "BHLH147", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LUK7-1", "protein_name": "Transcription factor bHLH28", "gene_name": "BHLH28", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0JXE7-1", "protein_name": "Transcription factor BPE", "gene_name": "BPE", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3EAI1-1", "protein_name": "Transcription factor bHLH60", "gene_name": "BHLH60", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q58G01-1", "protein_name": "Transcription factor bHLH155", "gene_name": "BHLH155", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FGB0-1", "protein_name": "Transcription factor bHLH145", "gene_name": "BHLH145", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZVX2-1", "protein_name": "Transcription factor ABORTED MICROSPORES", "gene_name": "AMS", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I8F9-1", "protein_name": "Transcription factor bHLH160", "gene_name": "BHLH160; CITF1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M041-1", "protein_name": "Transcription factor bHLH140", "gene_name": "APTX; BHLH140", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A4D998-1", "protein_name": "Transcription factor bHLH75", "gene_name": "BHLH75", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M0R0-1", "protein_name": "Transcription factor bHLH81", "gene_name": "BHLH81", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LQ08-1", "protein_name": "Transcription factor bHLH125", "gene_name": "BHLH125", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22768-1", "protein_name": "Transcription factor UNE12", "gene_name": "UNE12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22901-1", "protein_name": "Transcription factor UPBEAT1", "gene_name": "UPB1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80482-1", "protein_name": "Transcription factor bHLH149", "gene_name": "BHLH149", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CAD0-1", "protein_name": "Transcription factor EGL1", "gene_name": "BHLH2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FUA4-1", "protein_name": "Transcription factor SPATULA", "gene_name": "SPT", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LNJ5-1", "protein_name": "Transcription factor bHLH13", "gene_name": "BHLH13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81900-1", "protein_name": "Transcription factor DYT1", "gene_name": "DYT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93Y00-1", "protein_name": "Transcription factor bHLH7", "gene_name": "BHLH7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8P8-1", "protein_name": "Transcription factor bHLH80", "gene_name": "BHLH80; FBH1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C670-1", "protein_name": "Transcription factor bHLH76", "gene_name": "BHLH76; CIB5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1PF16-1", "protein_name": "Transcription factor bHLH19", "gene_name": "BHLH19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W2F1-1", "protein_name": "Transcription factor MYC1", "gene_name": "ATMYC1; BHLH12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMB6-1", "protein_name": "Transcription factor BIM3", "gene_name": "BIM3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHA7-1", "protein_name": "Transcription factor HEC1", "gene_name": "HEC1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9STJ6-1", "protein_name": "Transcription factor bHLH126", "gene_name": "BHLH126", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T072-1", "protein_name": "Transcription factor bHLH25", "gene_name": "BHLH25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZW81-1", "protein_name": "Transcription factor bHLH129", "gene_name": "BHLH129", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XEF0-1", "protein_name": "Transcription factor bHLH51", "gene_name": "BHLH51", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L467-1", "protein_name": "Transcription factor bHLH104", "gene_name": "BHLH104", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W2F2-1", "protein_name": "Transcription factor bHLH11", "gene_name": "BHLH11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93W88-1", "protein_name": "Transcription factor bHLH137", "gene_name": "BHLH137", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S3F1-1", "protein_name": "Transcription factor NAI1", "gene_name": "NAI1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZ22-1", "protein_name": "Transcription factor bHLH103", "gene_name": "BHLH103", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CAA9-1", "protein_name": "Transcription factor bHLH49", "gene_name": "BHLH49", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHA2-1", "protein_name": "Transcription factor ALC", "gene_name": "ALC", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LT23-1", "protein_name": "Transcription factor bHLH121", "gene_name": "BHLH121", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTC7-1", "protein_name": "Transcription factor bHLH34", "gene_name": "BHLH34", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJL4-1", "protein_name": "Transcription factor bHLH78", "gene_name": "BHLH78; CIB2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LND0-1", "protein_name": "Transcription factor bHLH89", "gene_name": "BHLH89", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZPW3-1", "protein_name": "Transcription factor HBI1", "gene_name": "HBI1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZ02-1", "protein_name": "Transcription factor bHLH48", "gene_name": "BHLH48; MHK10.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C682-1", "protein_name": "Transcription factor bHLH115", "gene_name": "BHLH115", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ASX9-1", "protein_name": "Transcription factor bHLH144", "gene_name": "BHLH144", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZVB5-1", "protein_name": "Transcription factor bHLH100", "gene_name": "BHLH100", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81037-1", "protein_name": "Transcription factor bHLH70", "gene_name": "BHLH70; MYC70", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80674-1", "protein_name": "Transcription factor bHLH106", "gene_name": "BHLH106", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q700E3-1", "protein_name": "Transcription factor bHLH27", "gene_name": "BHLH27", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q2HIV9-1", "protein_name": "Transcription factor bHLH35", "gene_name": "BHLH35; MUL3.10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3E7L7-1", "protein_name": "Transcription factor bHLH139", "gene_name": "BHLH139", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XIN0-1", "protein_name": "Transcription factor LHW", "gene_name": "LHW", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZPY8-1", "protein_name": "Transcription factor ABA-INDUCIBLE bHLH-TYPE", "gene_name": "AIB", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IQQ9-1", "protein_name": "Transcription factor bHLH138", "gene_name": "BHLH138", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0CB25-1", "protein_name": "Transcription factor bHLH131", "gene_name": "BHLH131", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q700C7-1", "protein_name": "Transcription factor SPEECHLESS", "gene_name": "SPCH", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q7XJU0-1", "protein_name": "Transcription factor bHLH157", "gene_name": "BHLH157; LHL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L5W7-1", "protein_name": "Transcription factor PIF6", "gene_name": "PIF6; PIL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L5W8-1", "protein_name": "Transcription factor PIL1", "gene_name": "PIL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S3D1-1", "protein_name": "Transcription factor bHLH68", "gene_name": "BHLH68", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S3D5-1", "protein_name": "Transcription factor LRL2", "gene_name": "LRL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GZ38-1", "protein_name": "Transcription factor UNE10", "gene_name": "UNE10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GWK7-1", "protein_name": "Transcription factor BEE 3", "gene_name": "BEE3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84LH8-1", "protein_name": "Transcription factor PIF5", "gene_name": "PIF5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84WK0-1", "protein_name": "Transcription factor RSL2", "gene_name": "RSL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GY61-1", "protein_name": "Transcription factor bHLH63", "gene_name": "BHLH63", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LEG1-1", "protein_name": "Transcription factor RSL3", "gene_name": "RSL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSE2-1", "protein_name": "Transcription factor ICE1", "gene_name": "ICE1; SCRM", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8Z9-1", "protein_name": "Transcription factor bHLH148", "gene_name": "BHLH148", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIP9-1", "protein_name": "Transcription factor MYC3", "gene_name": "MYC3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FY69-1", "protein_name": "Transcription factor bHLH143", "gene_name": "BHLH143", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49687-1", "protein_name": "Transcription factor MYC4", "gene_name": "MYC4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80536-1", "protein_name": "Transcription factor PIF3", "gene_name": "PIF3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81313-1", "protein_name": "Transcription factor IND", "gene_name": "IND", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FN69-1", "protein_name": "Transcription factor GLABRA 3", "gene_name": "GL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q7XJU2-1", "protein_name": "Transcription factor bHLH153", "gene_name": "BHLH153", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FE22-1", "protein_name": "Transcription factor HFR1", "gene_name": "HFR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GZM7-1", "protein_name": "Transcription factor PIF1", "gene_name": "PIF1; PIL5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H102-1", "protein_name": "Transcription factor bHLH128", "gene_name": "BHLH128", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXD8-1", "protein_name": "Transcription factor HEC3", "gene_name": "HEC3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M128-1", "protein_name": "Transcription factor bHLH57", "gene_name": "BHLH57", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SN74-1", "protein_name": "Transcription factor bHLH47", "gene_name": "BHLH47", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SND4-1", "protein_name": "Transcription factor HEC2", "gene_name": "HEC2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23090-1", "protein_name": "Transcription factor bHLH14", "gene_name": "BHLH14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23487-1", "protein_name": "Transcription factor bHLH3", "gene_name": "BHLH3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S3D2-1", "protein_name": "Transcription factor bHLH87", "gene_name": "BHLH87", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C690-1", "protein_name": "Transcription factor bHLH122", "gene_name": "BHLH122", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C707-1", "protein_name": "Transcription factor RHD6", "gene_name": "RHD6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CA64-1", "protein_name": "Transcription factor PRE3", "gene_name": "PRE3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CAA4-1", "protein_name": "Transcription factor BIM2", "gene_name": "BIM2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FH37-1", "protein_name": "Transcription factor ILR3", "gene_name": "ILR3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJ00-1", "protein_name": "Putative transcription factor bHLH086", "gene_name": "RSL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLE9-1", "protein_name": "Transcription factor PRE1", "gene_name": "PRE1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FXA3-1", "protein_name": "Transcription factor bHLH95", "gene_name": "BHLH95", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LS08-1", "protein_name": "Transcription factor AIG1", "gene_name": "BHLH32", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSQ3-1", "protein_name": "Transcription factor LRL3", "gene_name": "LRL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LV17-1", "protein_name": "Transcription factor bHLH79", "gene_name": "BHLH79", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GXT3-1", "protein_name": "Transcription factor bHLH123", "gene_name": "BHLH123", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q700E4-1", "protein_name": "Transcription factor bHLH67", "gene_name": "BHLH67; MYC67", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WNR2-1", "protein_name": "Transcription factor bHLH90", "gene_name": "BHLH90", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84TK1-1", "protein_name": "Transcription factor bHLH10", "gene_name": "BHLH010; BHLH10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JIJ7-1", "protein_name": "Transcription factor bHLH162", "gene_name": "BHLH162", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q7XJU1-1", "protein_name": "Transcription factor bHLH154", "gene_name": "BHLH154", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GX46-1", "protein_name": "Transcription factor bHLH91", "gene_name": "BHLH91", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLI0-1", "protein_name": "Transcription factor bHLH120", "gene_name": "BHLH120; MIO24.8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LT67-1", "protein_name": "Transcription factor bHLH113", "gene_name": "BHLH113", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FYJ6-1", "protein_name": "Transcription factor bHLH111", "gene_name": "BHLH111", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTS4-1", "protein_name": "Putative transcription factor bHLH041", "gene_name": "BHLH41; MHM17.7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLI1-1", "protein_name": "Transcription factor bHLH36", "gene_name": "BHLH36; BHLH", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKQ6-1", "protein_name": "Transcription factor bHLH99", "gene_name": "BHLH99; MNA5.5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LET0-1", "protein_name": "Putative transcription factor bHLH107", "gene_name": "BHLH107", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FRI0-1", "protein_name": "Transcription factor MEE8", "gene_name": "MEE8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LN95-1", "protein_name": "Transcription factor bHLH55", "gene_name": "BHLH55", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LRJ4-1", "protein_name": "Transcription factor bHLH117", "gene_name": "BHLH117", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1PF17-1", "protein_name": "Transcription factor bHLH18", "gene_name": "BHLH18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39204-1", "protein_name": "Transcription factor MYC2", "gene_name": "MYC2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q56YJ8-1", "protein_name": "Transcription factor FAMA", "gene_name": "FAMA; FMA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LPW3-1", "protein_name": "Transcription factor SCREAM2", "gene_name": "SCRM2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SK91-1", "protein_name": "Transcription factor bHLH94", "gene_name": "BHLH094; BHLH94", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q66GR3-1", "protein_name": "Transcription factor bHLH130", "gene_name": "BHLH130; FBH4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FYE6-1", "protein_name": "Transcription factor bHLH101", "gene_name": "BHLH101", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q56XR0-1", "protein_name": "Transcription factor bHLH71", "gene_name": "BHLH071; BHLH71", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q570R7-1", "protein_name": "Transcription factor PIF7", "gene_name": "BHLH72", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NKN9-1", "protein_name": "Transcription factor bHLH74", "gene_name": "BHLH74", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GZ13-1", "protein_name": "Transcription factor BEE 1", "gene_name": "BEE1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93VJ4-1", "protein_name": "Transcription factor BEE 2", "gene_name": "BEE2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1K0-1", "protein_name": "Transcription factor ORG3", "gene_name": "ORG3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1K1-1", "protein_name": "Transcription factor ORG2", "gene_name": "ORG2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JCN9-1", "protein_name": "Transcription factor PRE4", "gene_name": "PRE4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C7T4-1", "protein_name": "Transcription factor bHLH96", "gene_name": "BHLH096; BHLH96", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94JL3-1", "protein_name": "Transcription factor bHLH112", "gene_name": "ATBHLH112; BHLH112", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0V7X4-1", "protein_name": "Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR", "gene_name": "FIT", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LEZ3-1", "protein_name": "Transcription factor BIM1", "gene_name": "BIM1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M0B9-1", "protein_name": "Transcription factor IBH1-like 1", "gene_name": "IBL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SKX1-1", "protein_name": "Transcription factor IBH1", "gene_name": "IBH1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIX5-1", "protein_name": "Transcription factor bHLH92", "gene_name": "BHLH92", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LK48-1", "protein_name": "Transcription factor bHLH77", "gene_name": "BHLH77", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M8K6-1", "protein_name": "Transcription factor MUTE", "gene_name": "MUTE", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M9L6-1", "protein_name": "Transcription factor bHLH150", "gene_name": "BHLH150", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZUG9-1", "protein_name": "Transcription factor LRL1", "gene_name": "LRL1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84RD0", "url": "https://www.uniprot.org/uniprotkb/Q84RD0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.14600211", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 152 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The FRIGIDA complex activates transcription of FLC, a strong flowering repressor in Arabidopsis, by recruiting chromatin modification factors.", "journal": "The Plant cell", "date": "2011-01", "authors": "Choi Kyuha, Kim Juhyun, Hwang Hyun-Ju, Kim Sanghee, Park Chulmin, Kim Sang Yeol, Lee Ilha", "reference": { "type": "PubMed", "id": "21282526", "url": "https://pubmed.ncbi.nlm.nih.gov/21282526" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84TD8-1", "protein_name": "Protein FLX-like 2", "gene_name": "FLXL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IMQ0-1", "protein_name": "Protein FLC EXPRESSOR", "gene_name": "FLX", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93V84-1", "protein_name": "Protein FLX-like 1", "gene_name": "FLXL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C717-1", "protein_name": "Protein FLX-like 3", "gene_name": "FLXL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHW2-1", "protein_name": "SWR1 complex subunit 6", "gene_name": "SWC6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFF1-1", "protein_name": "FRIGIDA-like protein 1", "gene_name": "FRL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FH40-1", "protein_name": "Transcription initiation factor TFIID subunit 14b", "gene_name": "TAF14B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMR9-1", "protein_name": "RuvB-like protein 1", "gene_name": "RIN1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84VG7-1", "protein_name": "Protein FRIGIDA-ESSENTIAL 1", "gene_name": "FES1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FH51-1", "protein_name": "Protein FLX-like 4", "gene_name": "FLL4; FLXL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q2LAE1-1", "protein_name": "Histone-lysine N-methyltransferase ASHH2", "gene_name": "ASHH2; EFS", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C5G0-1", "protein_name": "Protein SUPPRESSOR OF FRI 4", "gene_name": "SUF4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IPK2-1", "protein_name": "Transcription initiation factor TFIID subunit 14", "gene_name": "TAF14", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84TD8", "url": "https://www.uniprot.org/uniprotkb/Q84TD8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.21282526", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 13 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Two FLX family members are non-redundantly required to establish the vernalization requirement in Arabidopsis.", "journal": "Nature communications", "date": "2013", "authors": "Lee Joohyun, Amasino Richard M", "reference": { "type": "PubMed", "id": "23864009", "url": "https://pubmed.ncbi.nlm.nih.gov/23864009" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84TD8-1", "protein_name": "Protein FLX-like 2", "gene_name": "FLXL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IMQ0-1", "protein_name": "Protein FLC EXPRESSOR", "gene_name": "FLX", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93V84-1", "protein_name": "Protein FLX-like 1", "gene_name": "FLXL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C717-1", "protein_name": "Protein FLX-like 3", "gene_name": "FLXL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FH51-1", "protein_name": "Protein FLX-like 4", "gene_name": "FLL4; FLXL4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84TD8", "url": "https://www.uniprot.org/uniprotkb/Q84TD8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 176, "end_pos": 176, "sequence_org": "R", "sequence_mut": "K", "comment": "In flx-3; early flowering.", "evidence": [ { "database": "UniProtKB", "id": "F4IMQ0", "url": "https://www.uniprot.org/uniprotkb/F4IMQ0" }, { "database": "PubMed", "id": "23864009", "url": "https://pubmed.ncbi.nlm.nih.gov/23864009" } ], "uniprot_canonical_ac": "F4IMQ0-1" } ], "record_id": "pubmed.23864009", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Widespread occurrence of a highly conserved RING-H2 zinc finger motif in the model plant Arabidopsis thaliana.", "journal": "FEBS Lett.", "date": "1998", "authors": "Jensen R B, Jensen K L, Jespersen H M, Skriver K", "reference": { "type": "PubMed", "id": "9781696", "url": "https://pubmed.ncbi.nlm.nih.gov/9781696" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84TF5-1", 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ubiquitin-protein ligase RHA2B", "gene_name": "RHA2B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZT42-1", "protein_name": "E3 ubiquitin-protein ligase RHF2A", "gene_name": "RHF2A", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84TF5", "url": "https://www.uniprot.org/uniprotkb/Q84TF5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.9781696", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 15 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "PCH1 and PCHL promote photomorphogenesis in plants by controlling phytochrome B dark reversion.", "journal": "Nature communications", "date": "2017-12-20", "authors": "Enderle Beatrix, Sheerin David J, Paik Inyup, Kathare Praveen Kumar, Schwenk Philipp, Klose Cornelia, Ulbrich Maximilian H, Huq Enamul, Hiltbrunner Andreas", "reference": { "type": "PubMed", "id": "29263319", "url": "https://pubmed.ncbi.nlm.nih.gov/29263319" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84V03-1", "protein_name": "Protein PHOTOPERIODIC CONTROL OF HYPOCOTYL 1", "gene_name": "PCH1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O65680-1", "protein_name": "Protein PHOTOPERIODIC CONTROL OF HYPOCOTYL 1-LIKE", "gene_name": "PCHL", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P14713-1", "protein_name": "Phytochrome B", "gene_name": "PHYB", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84V03", "url": "https://www.uniprot.org/uniprotkb/Q84V03" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.29263319", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, 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"table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"protein_name": "Protein PHOTOPERIODIC CONTROL OF HYPOCOTYL 1-LIKE", "gene_name": "PCHL", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GZM7-1", "protein_name": "Transcription factor PIF1", "gene_name": "PIF1; PIL5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P43254-1", "protein_name": "E3 ubiquitin-protein ligase COP1", "gene_name": "COP1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84V03", "url": "https://www.uniprot.org/uniprotkb/Q84V03" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.32061894", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "AtOMA1 affects the OXPHOS system and plant growth in contrast to other newly identified ATP-independent proteases in Arabidopsis mitochondria.", "journal": "Front. Plant Sci.", "date": "2017", "authors": "Migdal Iwona, Skibior-Blaszczyk Renata, Heidorn-Czarna Malgorzata, Kolodziejczak Marta, Garbiec Arnold, Janska Hanna", "reference": { "type": "PubMed", "id": "28936218", "url": "https://pubmed.ncbi.nlm.nih.gov/28936218" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84VZ6-1", "protein_name": "Mitochondrial ATP-independent inner membrane protease subunit 2", "gene_name": "IMP1B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRP6-1", "protein_name": "Mitochondrial inner membrane protease ATP23", "gene_name": "ATATP23; ATP23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4KDA5-1", "protein_name": "Mitochondrial intermediate peptidase, mitochondrial", "gene_name": "OCT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLI5-1", "protein_name": "Mitochondrial metalloendopeptidase OMA1", "gene_name": "OMA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": 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}, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Isolation and gene expression analysis of Arabidopsis thaliana mutants with constitutive expression of ATL2, an early elicitor-response RING-H2 zinc-finger gene.", "journal": "Genetics", "date": "2004", "authors": "Serrano Mario, Guzm\u00e1n Plinio", "reference": { "type": "PubMed", "id": "15238540", "url": "https://pubmed.ncbi.nlm.nih.gov/15238540" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84W40-1", "protein_name": "RING-H2 finger protein ATL11", "gene_name": "ATL11", "tax_name": "Mouse-ear cress" }, { 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"uniprot_canonical_ac": "P0C034-1", "protein_name": "RING-H2 finger protein ATL10", "gene_name": "ATL10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64763-1", "protein_name": "E3 ubiquitin-protein ligase ATL9", "gene_name": "ATL9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSW9-1", "protein_name": "RING-H2 finger protein ATL16", "gene_name": "ATL16", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84W40", "url": "https://www.uniprot.org/uniprotkb/Q84W40" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15238540", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 11 } ], "sort_fields": [ 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cross genome comparisons of serine proteases in Arabidopsis and rice.", "journal": "BMC Genomics", "date": "2006", "authors": "Tripathi Lokesh P, Sowdhamini R", "reference": { "type": "PubMed", "id": "16895613", "url": "https://pubmed.ncbi.nlm.nih.gov/16895613" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84WG3-1", "protein_name": "Rhomboid-like protein 16, chloroplastic", "gene_name": "RBL16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LYP1-1", "protein_name": "RHOMBOID-like protein 3", "gene_name": "RBL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WQX7-1", "protein_name": "RHOMBOID-like protein 1", "gene_name": "RBL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CAN1-1", "protein_name": "RHOMBOID-like protein 2", "gene_name": "RBL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I8K2-1", "protein_name": "Inactive RHOMBOID-like protein 8", "gene_name": "KOM", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "B3H707-1", "protein_name": "Rhomboid-like protein 17, chloroplastic", "gene_name": "RBL17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4KHG6-1", "protein_name": "Carboxyl-terminal-processing peptidase 1, chloroplastic", "gene_name": "CTPA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23614-1", "protein_name": "Carboxyl-terminal-processing peptidase 2, chloroplastic", "gene_name": "CTPA2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1B5-1", "protein_name": "RHOMBOID-like protein 13", "gene_name": "RBL13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSR0-1", "protein_name": "RHOMBOID-like protein 5", "gene_name": "RBL5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LET3-1", "protein_name": "Rhomboid-like protein 20", "gene_name": "RBL20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZ48-1", "protein_name": "RHOMBOID-like protein 6, mitochondrial", "gene_name": "RBL6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RXQ2-1", "protein_name": "Rhomboid-like protein 18", "gene_name": "RBL18; UBAC2B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LB17-1", "protein_name": "Rhomboid-like protein 15", "gene_name": "RBL15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LF05-1", "protein_name": "Rhomboid-like protein 19", "gene_name": "RBL19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RXW0-1", "protein_name": "Rhomboid-like protein 14, mitochondrial", "gene_name": "RBL14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JBM4-1", "protein_name": "RHOMBOID-like protein 4", "gene_name": "RBL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J3G5-1", "protein_name": "Carboxyl-terminal-processing peptidase 3, chloroplastic", "gene_name": "CTPA3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFX0-1", "protein_name": "RHOMBOID-like protein 9, chloroplastic", "gene_name": "RBL9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82756-1", "protein_name": "RHOMBOID-like protein 7", "gene_name": "RBL7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84MB5-1", "protein_name": "Rhomboid-like protein 11, chloroplastic", "gene_name": "RBL11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FZ81-1", "protein_name": "RHOMBOID-like protein 12, mitochondrial", "gene_name": "RBL12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4ICF4-1", "protein_name": "RHOMBOID-like protein 10, chloroplastic", "gene_name": "RBL10", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84WG3", "url": "https://www.uniprot.org/uniprotkb/Q84WG3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16895613", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 23 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Uncovering a link between a plastid translocon component and rhomboid proteases using yeast mitochondria-based assays.", "journal": "Plant & cell physiology", "date": "2007-04", "authors": "Karakasis Katherine, Taylor Darcie, Ko Kenton", "reference": { "type": "PubMed", "id": "17327256", "url": "https://pubmed.ncbi.nlm.nih.gov/17327256" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84WG3-1", "protein_name": "Rhomboid-like protein 16, chloroplastic", "gene_name": "RBL16", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84WG3", "url": 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"count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Functional and evolutionary implications of enhanced genomic analysis of rhomboid intramembrane proteases.", "journal": "Genome Res.", "date": "2007", "authors": "Lemberg Marius K, Freeman Matthew", "reference": { "type": "PubMed", "id": "17938163", "url": "https://pubmed.ncbi.nlm.nih.gov/17938163" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84WG3-1", "protein_name": "Rhomboid-like protein 16, chloroplastic", "gene_name": "RBL16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LYP1-1", "protein_name": "RHOMBOID-like protein 3", "gene_name": "RBL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WQX7-1", "protein_name": "RHOMBOID-like protein 1", "gene_name": "RBL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CAN1-1", "protein_name": "RHOMBOID-like protein 2", "gene_name": "RBL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I8K2-1", "protein_name": "Inactive RHOMBOID-like protein 8", "gene_name": "KOM", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "B3H707-1", "protein_name": "Rhomboid-like protein 17, chloroplastic", "gene_name": "RBL17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1B5-1", "protein_name": "RHOMBOID-like protein 13", "gene_name": "RBL13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSR0-1", "protein_name": "RHOMBOID-like protein 5", "gene_name": "RBL5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LET3-1", "protein_name": "Rhomboid-like protein 20", "gene_name": "RBL20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZ48-1", "protein_name": "RHOMBOID-like protein 6, mitochondrial", "gene_name": "RBL6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RXQ2-1", "protein_name": "Rhomboid-like protein 18", "gene_name": "RBL18; UBAC2B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LB17-1", "protein_name": "Rhomboid-like protein 15", "gene_name": "RBL15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LF05-1", "protein_name": "Rhomboid-like protein 19", "gene_name": "RBL19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RXW0-1", "protein_name": "Rhomboid-like protein 14, mitochondrial", "gene_name": "RBL14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JBM4-1", "protein_name": "RHOMBOID-like protein 4", "gene_name": "RBL4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFX0-1", "protein_name": "RHOMBOID-like protein 9, chloroplastic", "gene_name": "RBL9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82756-1", "protein_name": "RHOMBOID-like protein 7", "gene_name": "RBL7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84MB5-1", "protein_name": "Rhomboid-like protein 11, chloroplastic", "gene_name": "RBL11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FZ81-1", "protein_name": "RHOMBOID-like protein 12, mitochondrial", "gene_name": "RBL12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4ICF4-1", "protein_name": "RHOMBOID-like protein 10, chloroplastic", "gene_name": "RBL10", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84WG3", "url": "https://www.uniprot.org/uniprotkb/Q84WG3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17938163", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 20 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { 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"total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification and characterization of AtI-2, an Arabidopsis homologue of an ancient protein phosphatase 1 (PP1) regulatory subunit.", "journal": "Biochem. J.", "date": "2011", "authors": "Templeton George W, Nimick Mhairi, Morrice Nicholas, Campbell David, Goudreault Marilyn, Gingras Anne-Claude, Takemiya Atsushi, Shimazaki Ken-Ichiro, Moorhead Greg B G", "reference": { "type": "PubMed", "id": "21222654", "url": "https://pubmed.ncbi.nlm.nih.gov/21222654" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84WJ9-1", "protein_name": "Protein phosphatase 1 regulatory inhibitor subunit PPP1R7 homolog", "gene_name": "", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P48485-1", "protein_name": "Serine/threonine-protein phosphatase PP1 isozyme 5", "gene_name": "TOPP5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTK0-1", "protein_name": "Protein phosphatase inhibitor 2", "gene_name": "I-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82734-1", "protein_name": "Serine/threonine-protein phosphatase PP1 isozyme 8", "gene_name": "TOPP8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82733-1", "protein_name": "Serine/threonine-protein phosphatase PP1 isozyme 7", "gene_name": "TOPP7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P30366-1", "protein_name": "Serine/threonine-protein phosphatase PP1 isozyme 1", "gene_name": "TOPP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P48486-1", "protein_name": "Serine/threonine-protein phosphatase PP1 isozyme 6", "gene_name": "TOPP6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIK2-1", "protein_name": "Protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog", "gene_name": "MCA23.11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P48482-1", "protein_name": "Serine/threonine-protein phosphatase PP1 isozyme 2", "gene_name": "TOPP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P48483-1", "protein_name": "Serine/threonine-protein phosphatase PP1 isozyme 3", "gene_name": "TOPP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P48484-1", "protein_name": "Serine/threonine-protein phosphatase PP1 isozyme 4", "gene_name": "TOPP4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M9W3-1", "protein_name": "Serine/threonine-protein phosphatase PP1 isozyme 9", "gene_name": "TOPP9", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84WJ9", "url": "https://www.uniprot.org/uniprotkb/Q84WJ9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 11, "end_pos": 11, "sequence_org": "W", "sequence_mut": "A", "comment": "Loss of binding to protein-phosphatase 1 (PP1); when associated with A-9.", "evidence": [ { "database": "UniProtKB", "id": "Q9LTK0", "url": "https://www.uniprot.org/uniprotkb/Q9LTK0" }, { "database": "PubMed", "id": "21222654", "url": "https://pubmed.ncbi.nlm.nih.gov/21222654" } ], "uniprot_canonical_ac": "Q9LTK0-1" }, { "start_pos": 9, "end_pos": 9, "sequence_org": "V", "sequence_mut": "A", "comment": "Loss of binding to protein-phosphatase 1 (PP1); when associated with A-11.", "evidence": [ { "database": "UniProtKB", "id": "Q9LTK0", "url": "https://www.uniprot.org/uniprotkb/Q9LTK0" }, { "database": "PubMed", "id": "21222654", "url": "https://pubmed.ncbi.nlm.nih.gov/21222654" } ], "uniprot_canonical_ac": "Q9LTK0-1" } ], "record_id": "pubmed.21222654", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 12 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Adaptins: the final recount.", "journal": "Mol. Biol. Cell", "date": "2001", "authors": "Boehm M, Bonifacino JS", "reference": { "type": "PubMed", "id": "11598180", "url": "https://pubmed.ncbi.nlm.nih.gov/11598180" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84WL9-1", "protein_name": "AP-2 complex subunit sigma", "gene_name": "AP17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SUS3-1", "protein_name": "Beta-adaptin-like protein B", "gene_name": "BETAB-AD", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22715-1", "protein_name": "AP-1 complex subunit mu-2", "gene_name": "AP1M2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81742-1", "protein_name": "Beta-adaptin-like protein C", "gene_name": "BETAC-AD", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23140-1", "protein_name": "AP-2 complex subunit mu", "gene_name": "AP2M", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZUI6-1", "protein_name": "AP-1 complex subunit gamma-2", "gene_name": "T2K10.12; T2K10_12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LPK4-1", "protein_name": "AP-2 complex subunit alpha-2", "gene_name": "ALPHAC-AD", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LPL6-1", "protein_name": "AP-2 complex subunit alpha-1", "gene_name": "ALPHA-ADR", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LDK9-1", "protein_name": "Beta-adaptin-like protein A", "gene_name": "AP4B; BETAA-AD", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SB50-1", "protein_name": "AP-4 complex subunit mu", "gene_name": "AP4M", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SAC9-1", "protein_name": "AP-1 complex subunit mu-1", "gene_name": "AP1M1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L7A9-1", "protein_name": "AP-4 complex subunit epsilon", "gene_name": "F27M3.7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZ37-1", "protein_name": "AP-3 complex subunit sigma", "gene_name": "AP-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LEZ8-1", "protein_name": "AP-1 complex subunit sigma-1", "gene_name": "AAP19-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23685-1", "protein_name": "AP-1 complex subunit sigma-2", "gene_name": "AAP19-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O82201-1", "protein_name": "AP-4 complex subunit sigma", "gene_name": "F6F22.18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84K16-1", "protein_name": "AP-1 complex subunit gamma-1", "gene_name": "GAMMA-ADAPTIN; GAMMA-ADR", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C744-1", "protein_name": "AP-3 complex subunit delta", "gene_name": "DELTA-ADR", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96PC3-1", "protein_name": "AP-1 complex subunit sigma-3", "gene_name": "AP1S3", "tax_name": "Human" }, { "uniprot_canonical_ac": "F4I562-1", "protein_name": "AP-3 complex subunit mu", "gene_name": "AP3M", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M2T1-1", "protein_name": "AP3-complex subunit beta-A", "gene_name": "AP3BA; PAT2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84WL9", "url": "https://www.uniprot.org/uniprotkb/Q84WL9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11598180", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 21 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular cloning and characterization of the Arabidopsis thaliana alpha-subunit of elongation factor 1B.", "journal": "FEBS letters", "date": "1999-12-31", "authors": "H\u00e9ricourt F, Jupin I", "reference": { "type": "PubMed", "id": "10618495", "url": "https://pubmed.ncbi.nlm.nih.gov/10618495" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84WM9-1", "protein_name": "Elongation factor 1-beta 1", "gene_name": "MXC9.7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCX3-1", "protein_name": "Elongation factor 1-beta 2", "gene_name": "T20D1.30", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84WM9", "url": "https://www.uniprot.org/uniprotkb/Q84WM9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.10618495", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis thaliana type I and II chaperonins.", "journal": "Cell Stress Chaperones", "date": "2001", "authors": "Hill J E, Hemmingsen S M", "reference": { "type": "PubMed", "id": "11599560", "url": "https://pubmed.ncbi.nlm.nih.gov/11599560" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84WV1-1", "protein_name": "T-complex protein 1 subunit gamma", "gene_name": "CCT3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LV21-1", "protein_name": "T-complex protein 1 subunit delta", "gene_name": "CCT4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M888-1", "protein_name": "T-complex protein 1 subunit zeta 1", "gene_name": "CCT6A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SF16-1", "protein_name": "T-complex protein 1 subunit eta", "gene_name": "CCT7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0Z361-1", "protein_name": "Chaperonin 60 subunit beta 3, chloroplastic", "gene_name": 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Biol.", "date": "2004", "authors": "Xu Zhiwei, Escamilla-Trevi\u00f1o Luis, Zeng Lihui, Lalgondar Mallikarjun, Bevan David, Winkel Brenda, Mohamed Ali, Cheng Chi-Lien, Shih Ming-Che, Poulton Jonathan, Esen Asim", "reference": { "type": "PubMed", "id": "15604686", "url": "https://pubmed.ncbi.nlm.nih.gov/15604686" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84WV2-1", "protein_name": "Beta-glucosidase 20", "gene_name": "BGLU20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GXT2-1", "protein_name": "Beta-glucosidase 29", "gene_name": "BGLU29", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LV34-1", "protein_name": "Beta-glucosidase 43", "gene_name": "BGLU43", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LU02-1", "protein_name": "Beta-glucosidase 13", "gene_name": "BGLU13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZJ1-1", "protein_name": "Beta-glucosidase 7", "gene_name": "BGLU7", 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sequence analysis and expression studies of novel anther-specific genes of Arabidopsis thaliana.", "journal": "Plant Mol. Biol.", "date": "1998", "authors": "Rubinelli P, Hu Y, Ma H", "reference": { "type": "PubMed", "id": "9687065", "url": "https://pubmed.ncbi.nlm.nih.gov/9687065" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84WV2-1", "protein_name": "Beta-glucosidase 20", "gene_name": "BGLU20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JL89-1", "protein_name": "Protein ARABIDOPSIS THALIANA ANTHER 7", "gene_name": "ATA7", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84WV2", "url": "https://www.uniprot.org/uniprotkb/Q84WV2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.9687065", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Equilibrative nucleoside transporters of Arabidopsis thaliana. cDNA cloning, expression pattern, and analysis of transport activities.", "journal": "J. Biol. Chem.", "date": "2003", "authors": "Li Guangyong, Liu Kunfan, Baldwin Stephen A, Wang Daowen", "reference": { "type": "PubMed", "id": "12810710", "url": "https://pubmed.ncbi.nlm.nih.gov/12810710" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q84XI3-1", "protein_name": "Equilibrative nucleotide transporter 8", "gene_name": "ETN8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M0Y2-1", "protein_name": "Equilibrative nucleotide transporter 4", "gene_name": "ENT4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M0Y3-1", "protein_name": "Equilibrative nucleotide transporter 3", "gene_name": "ENT3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SR64-1", "protein_name": "Equilibrative nucleotide transporter 2", "gene_name": "ENT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q944N8-1", "protein_name": "Equilibrative nucleotide transporter 6", "gene_name": "ENT6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VXY7-1", "protein_name": "Equilibrative nucleotide transporter 1", "gene_name": "ENT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q944P0-1", "protein_name": "Equilibrative nucleotide transporter 7", "gene_name": "ENT7", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q84XI3", "url": "https://www.uniprot.org/uniprotkb/Q84XI3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12810710", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Inferring hypotheses on functional relationships of genes: Analysis of the Arabidopsis thaliana subtilase gene family.", "journal": "PLoS Comput. Biol.", "date": "2005", "authors": "Rautengarten Carsten, Steinhauser Dirk, B\u00fcssis Dirk, Stintzi Annick, Schaller Andreas, Kopka Joachim, Altmann Thomas", "reference": { "type": "PubMed", "id": "16193095", "url": "https://pubmed.ncbi.nlm.nih.gov/16193095" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GUK4-1", "protein_name": "Subtilisin-like protease SBT3.13", "gene_name": "SBT3.13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GWX9-1", "protein_name": "Subtilisin-like protease SBT3.16", "gene_name": "SBT3.16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LUM3-1", "protein_name": "Subtilisin-like protease SBT1.5", "gene_name": "SBT1.5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZY2-1", "protein_name": "Subtilisin-like protease SBT3.7", "gene_name": "SBT3.7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9STQ2-1", "protein_name": "Subtilisin-like protease SBT3.18", "gene_name": "SBT3.18; UNE17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZS6-1", "protein_name": "Subtilisin-like protease SBT4.15", "gene_name": "SBT4.15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9MAP4-1", "protein_name": "Subtilisin-like protease SBT3.2", "gene_name": "SBT3.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SA75-1", "protein_name": "Subtilisin-like protease SBT2.1", "gene_name": "SBT2.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HPF1-1", "protein_name": "Subtilisin-like protease SBT3.4", "gene_name": "SBT3.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HSQ2-1", "protein_name": "Subtilisin-like protease SBT5.1", "gene_name": "SBT5.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IG09-1", "protein_name": "Subtilisin-like protease SBT4.1", "gene_name": "SBT4.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LVJ1-1", "protein_name": "Subtilisin-like protease SBT1.4", "gene_name": "SBT1.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9MAP7-1", "protein_name": "Subtilisin-like protease SBT3.5", "gene_name": "SBT3.5; SBT35", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HYR6-1", "protein_name": "Subtilisin-like protease SBT2.4", "gene_name": "SBT2.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JXC5-1", "protein_name": "Subtilisin-like protease SBT5.4", "gene_name": "SBT5.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9STF7-1", "protein_name": "Subtilisin-like protease SBT4.6", "gene_name": "SBT4.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SUN6-1", "protein_name": "Subtilisin-like protease SBT2.2", "gene_name": "SBT2.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVT4-1", "protein_name": "Subtilisin-like protease SBT3.14", "gene_name": "SBT3.14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZV5-1", "protein_name": "Subtilisin-like protease SBT2.6", "gene_name": "SBT2.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZY3-1", "protein_name": "Subtilisin-like protease SBT3.8", "gene_name": "SBT3.8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZSB0-1", "protein_name": "Subtilisin-like protease SBT3.9", "gene_name": "SBT3.9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZSB1-1", "protein_name": "Subtilisin-like protease SBT3.10", "gene_name": "SBT3.10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZUF6-1", "protein_name": "Subtilisin-like protease SBT1.8", "gene_name": "SBT1.8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L7D2-1", "protein_name": "Subtilisin-like protease SBT4.12", "gene_name": "SBT4.12; SBT412", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L7I2-1", "protein_name": "Subtilisin-like protease SBT3.6", "gene_name": "SBT3.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23357-1", "protein_name": "Subtilisin-like protease SBT4.2", "gene_name": "DL3561C; SBT4.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JJH5-1", "protein_name": "Subtilisin-like protease SBT3.12", "gene_name": "SBT3.12; SBT312", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JA91-1", "protein_name": "Subtilisin-like protease SBT4.5", "gene_name": "SBT4.5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JJH4-1", "protein_name": "Subtilisin-like protease SBT3.1", "gene_name": "SBT3.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JJL8-1", "protein_name": "Subtilisin-like protease SBT3.15", "gene_name": "SBT3.15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4KEL0-1", "protein_name": "Subtilisin-like protease SBT5.5", "gene_name": "SBT5.5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4KGD4-1", "protein_name": "Subtilisin-like protease SBT4.7", "gene_name": "SBT4.7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O49607-1", "protein_name": "Subtilisin-like protease SBT1.6", "gene_name": "SBT1.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64481-1", "protein_name": "Subtilisin-like protease SBT2.5", "gene_name": "SBT2.5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1PDX5-1", "protein_name": "Subtilisin-like protease SBT3.11", "gene_name": "SBT3.11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64495-1", "protein_name": "Subtilisin-like protease SBT1.2", "gene_name": "SBT1.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O65351-1", "protein_name": "Subtilisin-like protease SBT1.7", "gene_name": "SBT1.7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84WS0-1", "protein_name": "Subtilisin-like protease SBT1.1", "gene_name": "SBTI1.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C7U8-1", "protein_name": "Subtilisin-like protease SBT3.17", "gene_name": "SBT3.17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LLL8-1", "protein_name": "Subtilisin-like protease SBT4.14", "gene_name": "SBT4.14; XSP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIG1-1", "protein_name": "Subtilisin-like protease SBT4.11", "gene_name": "MNC17.3; SBT4.11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIM5-1", "protein_name": "Subtilisin-like protease SBT4.9", "gene_name": "SBT4.9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FI12-1", "protein_name": "Subtilisin-like protease SBT2.3", "gene_name": "MFC16.21; SBT2.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FGU3-1", "protein_name": "Subtilisin-like protease SBT4.4", "gene_name": "SBT4.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FHA4-1", "protein_name": "Subtilisin-like protease SBT1.9", "gene_name": "SBT1.9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIF8-1", "protein_name": "Subtilisin-like protease SBT4.3", "gene_name": "SBT4.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIG2-1", "protein_name": "Subtilisin-like protease SBT4.13", "gene_name": "SBT4.13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIM6-1", "protein_name": "Subtilisin-like protease SBT4.8", "gene_name": "SBT4.8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIM8-1", "protein_name": "Subtilisin-like protease SBT4.10", "gene_name": "SBT4.10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FK76-1", "protein_name": "Subtilisin-like protease SBT5.6", "gene_name": "SBT5.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLI4-1", "protein_name": "Subtilisin-like protease SBT1.3", "gene_name": "SBT1.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WUG6-1", "protein_name": "Subtilisin-like protease SBT6.1", "gene_name": "S1P; SBT6.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9MAP5-1", "protein_name": "Subtilisin-like protease SBT3.3", "gene_name": "SBT3.3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GUK4", "url": "https://www.uniprot.org/uniprotkb/Q8GUK4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16193095", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 53 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The J-domain proteins of Arabidopsis thaliana: an unexpectedly large and diverse family of chaperones.", "journal": "Cell Stress Chaperones", "date": "2001", "authors": "Miernyk J A", "reference": { "type": "PubMed", "id": "11599562", "url": "https://pubmed.ncbi.nlm.nih.gov/11599562" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GUN6-1", "protein_name": "Chaperone protein dnaJ 50", "gene_name": "C50", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SAG8-1", "protein_name": "Chaperone protein dnaJ 8, chloroplastic", "gene_name": "ATJ8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38813-1", "protein_name": "Chaperone protein dnaJ 1, mitochondrial", "gene_name": "ATJ1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LYW9-1", "protein_name": "DnaJ protein P58IPK homolog", "gene_name": "P58IPK", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FL54-1", "protein_name": "Chaperone protein dnaJ 6", "gene_name": "ATJ6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94AW8-1", "protein_name": "Chaperone protein dnaJ 3", "gene_name": "ATJ3; J3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WTI8-1", "protein_name": "Chaperone protein dnaJ 72", "gene_name": "ATJ72", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJZ7-1", "protein_name": "Chaperone protein dnaJ A6, chloroplastic", "gene_name": "DJA6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZSY2-1", "protein_name": "Chaperone protein dnaJ 15", "gene_name": "ATJ15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VXV4-1", "protein_name": "Chaperone protein dnaJ 16", "gene_name": "ATJ16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6XL73-1", "protein_name": "Chaperone protein dnaJ 39", "gene_name": "ARL2; ATJ39", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GYX8-1", "protein_name": "Chaperone protein dnaJ 10", "gene_name": "ATJ10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FH28-1", "protein_name": "Chaperone protein dnaJ 49", "gene_name": "ATJ49", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GWW8-1", "protein_name": "Chaperone protein dnaJ GFA2, mitochondrial", "gene_name": "GFA2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P42825-1", "protein_name": "Chaperone protein dnaJ 2", "gene_name": "ATJ2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39079-1", "protein_name": "Chaperone protein dnaJ 13", "gene_name": "ATJ13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FYB5-1", "protein_name": "Chaperone protein dnaJ 11, chloroplastic", "gene_name": "ATJ11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WT48-1", "protein_name": "DnaJ protein ERDJ2A", "gene_name": "ATERDJ2A; ERDJ2A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SDN0-1", "protein_name": "Chaperone protein dnaJ 20, chloroplastic", "gene_name": "ATJ20; J20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JIN3-1", "protein_name": "DnaJ protein ERDJ2B", "gene_name": "ATERDJ2B; ERDJ2B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZK5-1", "protein_name": "DnaJ protein ERDJ3B", "gene_name": "ERDJ3B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SR96-1", "protein_name": "DnaJ protein ERDJ3A", "gene_name": "ERDJ3A", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GUN6", "url": "https://www.uniprot.org/uniprotkb/Q8GUN6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11599562", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 22 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], 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"total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis thaliana has a set of J proteins in the endoplasmic reticulum that are conserved from yeast to animals and plants.", "journal": "Plant & cell physiology", "date": "2008-10", "authors": "Yamamoto Masaya, Maruyama Daisuke, Endo Toshiya, Nishikawa Shuh-ichi", "reference": { "type": "PubMed", "id": "18718935", "url": "https://pubmed.ncbi.nlm.nih.gov/18718935" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GUN6-1", "protein_name": "Chaperone protein dnaJ 50", "gene_name": "C50", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LYW9-1", "protein_name": "DnaJ protein P58IPK homolog", "gene_name": "P58IPK", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WT48-1", "protein_name": "DnaJ protein ERDJ2A", "gene_name": "ATERDJ2A; ERDJ2A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JIN3-1", "protein_name": "DnaJ protein ERDJ2B", "gene_name": "ATERDJ2B; ERDJ2B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZK5-1", "protein_name": "DnaJ protein ERDJ3B", "gene_name": "ERDJ3B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SR96-1", "protein_name": "DnaJ protein ERDJ3A", "gene_name": "ERDJ3A", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GUN6", "url": "https://www.uniprot.org/uniprotkb/Q8GUN6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.18718935", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of a novel 5-aminomethyl-2-thiouridine methyltransferase in tRNA modification.", "journal": "Nucleic acids research", "date": "2023-02-28", "authors": "Cho Gyuhyeok, Lee Jangmin, Kim Jungwook", "reference": { "type": "PubMed", "id": "36762482", "url": "https://pubmed.ncbi.nlm.nih.gov/36762482" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GUP2-1", "protein_name": "tRNA (mnm(5)s(2)U34)-methyltransferase, chloroplastic", "gene_name": "F3O9.25", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GUP2", "url": "https://www.uniprot.org/uniprotkb/Q8GUP2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": 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}, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Inositol phospholipid metabolism in Arabidopsis. Characterized and putative isoforms of inositol phospholipid kinase and phosphoinositide-specific phospholipase C.", "journal": "Plant Physiol.", "date": "2002", "authors": "Mueller-Roeber Bernd, Pical Christophe", "reference": { "type": "PubMed", "id": "12226484", "url": "https://pubmed.ncbi.nlm.nih.gov/12226484" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GV43-1", "protein_name": "Phosphoinositide phospholipase C 6", "gene_name": "PLC6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9STZ3-1", "protein_name": "Phosphoinositide phospholipase C 8", "gene_name": "PLC8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M149-1", "protein_name": "Putative phosphatidylinositol 4-phosphate 5-kinase 11", "gene_name": "PIP5K11; PIPK10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q56W08-1", "protein_name": "Phosphoinositide phospholipase C 3", "gene_name": "PLC3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NMA7-1", "protein_name": "Phosphoinositide phospholipase C 9", "gene_name": "PLC9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LY51-1", "protein_name": "Phosphoinositide phospholipase C 7", "gene_name": "PLC7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C671-1", "protein_name": "Phosphatidylinositol 4-kinase gamma 5", "gene_name": "PI4KG5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SFB8-1", "protein_name": "Phosphatidylinositol 4-phosphate 5-kinase 6", "gene_name": "PIP5K6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SUI2-1", "protein_name": "Phosphatidylinositol 4-phosphate 5-kinase 7", "gene_name": "PIP5K7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XID0-1", "protein_name": "Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D", "gene_name": "FAB1D", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q944C2-1", "protein_name": "Phosphoinositide phospholipase C 5", "gene_name": "PLC5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q944C1-1", "protein_name": "Phosphoinositide phospholipase C 4", "gene_name": "PLC4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FNF8-1", "protein_name": "Phosphatidylinositol 4-kinase gamma 3", "gene_name": "PI4KG3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SI52-1", "protein_name": "Phosphatidylinositol 4-kinase gamma 7", "gene_name": "PI4KG7; PI4K", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSJ8-1", "protein_name": "Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C", "gene_name": "FAB1C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RY89-1", "protein_name": "Phosphatidylinositol 4-phosphate 5-kinase 8", "gene_name": "PIP5K8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W4R8-1", "protein_name": "Phosphatidylinositol 4-kinase gamma 6", "gene_name": "PI4KG6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22199-1", "protein_name": "Phosphatidylinositol 4-kinase gamma 1", "gene_name": "PI4KG1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WMZ6-1", "protein_name": "Phosphatidylinositol 4-kinase gamma 8", "gene_name": "PI4KG8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L796-1", "protein_name": "Phosphatidylinositol 4-phosphate 5-kinase 2", "gene_name": "PIP5K2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L850-1", "protein_name": "Phosphatidylinositol 4-phosphate 5-kinase 9", "gene_name": "PIP5K9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48709-1", "protein_name": "Phosphatidylinositol 4-phosphate 5-kinase 3", "gene_name": "PIP5K3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C680-1", "protein_name": "Phosphatidylinositol 4-kinase alpha 2", "gene_name": "PI4KA2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LMN1-1", "protein_name": "Phosphatidylinositol 4-phosphate 5-kinase 10", "gene_name": "PIP5K10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WUR5-1", "protein_name": "1-phosphatidylinositol-3-phosphate 5-kinase FAB1A", "gene_name": "FAB1A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39033-1", "protein_name": "Phosphoinositide phospholipase C 2", "gene_name": "PLC2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WPX9-1", "protein_name": "Phosphatidylinositol 4-kinase beta 2", "gene_name": "PI4KB2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39032-1", "protein_name": "Phosphoinositide phospholipase C 1", "gene_name": "PLC1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMJ0-1", "protein_name": "Phosphatidylinositol 4-kinase beta 1", "gene_name": "PI-4KBETA1; PI4KB1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q56YP2-1", "protein_name": "Phosphatidylinositol 4-phosphate 5-kinase 1", "gene_name": "PIP5K1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LUM0-1", "protein_name": "1-phosphatidylinositol-3-phosphate 5-kinase FAB1B", "gene_name": "FAB1B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SXA1-1", "protein_name": "Phosphatidylinositol 4-kinase alpha 1", "gene_name": "ATPI4K; PI4KA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1K2-1", "protein_name": "Phosphatidylinositol 4-phosphate 5-kinase 4", "gene_name": "PIP5K4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SGW8-1", "protein_name": "Phosphatidylinositol 4-kinase gamma 2", "gene_name": "PI4KG2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SLG9-1", "protein_name": "Phosphatidylinositol 4-phosphate 5-kinase 5", "gene_name": "PIP5K5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZPY9-1", "protein_name": "Phosphatidylinositol 4-kinase gamma 4", "gene_name": "PI4KG4; PI4K", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GV43", "url": "https://www.uniprot.org/uniprotkb/Q8GV43" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12226484", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 36 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification and expression analysis of a gene encoding a bacterial-type phosphoenolpyruvate carboxylase from Arabidopsis and rice.", "journal": "Plant Physiol.", "date": "2003", "authors": "S\u00e1nchez Rosario, Cejudo Francisco Javier", "reference": { "type": "PubMed", "id": "12805623", "url": "https://pubmed.ncbi.nlm.nih.gov/12805623" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GVE8-1", "protein_name": "Phosphoenolpyruvate carboxylase 4", "gene_name": "PPC4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q5GM68-1", "protein_name": "Phosphoenolpyruvate carboxylase 2", "gene_name": "PPC2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84VW9-1", "protein_name": "Phosphoenolpyruvate carboxylase 3", "gene_name": "PPC3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9MAH0-1", "protein_name": "Phosphoenolpyruvate carboxylase 1", "gene_name": "PPC1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GVE8", "url": "https://www.uniprot.org/uniprotkb/Q8GVE8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12805623", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Functional and evolutionary analysis of the CASPARIAN STRIP MEMBRANE DOMAIN PROTEIN family.", "journal": "Plant Physiol.", "date": "2014", "authors": "Roppolo Daniele, Boeckmann Brigitte, Pfister Alexandre, Boutet Emmanuel, Rubio Maria C, D\u00e9nervaud-Tendon Val\u00e9rie, Vermeer Joop E M, Gheyselinck Jacqueline, Xenarios Ioannis, Geldner Niko", "reference": { "type": "PubMed", "id": "24920445", "url": "https://pubmed.ncbi.nlm.nih.gov/24920445" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GWD5-1", "protein_name": "CASP-like protein 4D1", "gene_name": "F12L6.19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LUL1-1", "protein_name": "CASP-like protein 2A2", "gene_name": "MLN21.16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXF3-1", "protein_name": "Casparian strip membrane protein 5", "gene_name": "CASP5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FNE8-1", "protein_name": "CASP-like protein 4A1", "gene_name": "MPO12.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LR57-1", "protein_name": "CASP-like protein 1C2", "gene_name": "F21B7.30", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZM5-1", "protein_name": "CASP-like protein 5B1", "gene_name": "T7H20_110", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M0L3-1", "protein_name": "CASP-like protein 1F1", "gene_name": "F13M23.180", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M2U0-1", "protein_name": "CASP-like protein 4C1", "gene_name": "T22E16.50", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SKN3-1", "protein_name": "CASP-like protein 5A2", "gene_name": "T1B3.11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SUP0-1", "protein_name": "CASP-like protein 1B2", "gene_name": "F9F13.40", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XI72-1", "protein_name": "CASP-like protein 1A1", "gene_name": "F7A19.24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1PFB8-1", "protein_name": "CASP-like protein 3A2", "gene_name": "F20B17.26", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L7R5-1", "protein_name": "CASP-like protein 5B3", "gene_name": "CASPL5B3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q945M8-1", "protein_name": "CASP-like protein 5B2", "gene_name": "CASPL5B2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84WP5-1", "protein_name": "CASP-like protein 4A3", "gene_name": "CASPL4A3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NPF8-1", "protein_name": "CASP-like protein 5A1", "gene_name": "CASPL5A1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3EA54-1", "protein_name": "CASP-like protein 4A4", "gene_name": "CASPL4A4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3EB59-1", "protein_name": "CASP-like protein 3A1", "gene_name": "MYA6.9; T2O4.16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3ECT8-1", "protein_name": "CASP-like protein 5C3", "gene_name": "F13F21.34", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CAX3-1", "protein_name": "Casparian strip membrane protein 2", "gene_name": "CASP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFZ7-1", "protein_name": "Casparian strip membrane protein 4", "gene_name": "CASP4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FE29-1", "protein_name": "CASP-like protein 1D1", "gene_name": "CASPL1D1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q501G6-1", "protein_name": "CASP-like protein 4A2", "gene_name": "MQB2.14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q56X75-1", "protein_name": "CASP-like protein 4D2", "gene_name": "F12L6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q66GI1-1", "protein_name": "CASP-like protein 5C1", "gene_name": "AP22.102", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L8U9-1", "protein_name": "CASP-like protein 2C1", "gene_name": "F14M19.9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L924-1", "protein_name": "CASP-like protein 2B2", "gene_name": "T20F21.5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L9B5-1", "protein_name": "CASP-like protein 2B1", "gene_name": "Dl4245c; FCAALL.228", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LE26-1", "protein_name": "CASP-like protein 4B1", "gene_name": "T19C21.23; T6A23.32", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZQ3-1", "protein_name": "CASP-like protein 2A1", "gene_name": "CASPL2A1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFT2-1", "protein_name": "CASP-like protein 2D1", "gene_name": "MBG8.25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZQI2-1", "protein_name": "Casparian strip membrane protein 3", "gene_name": "CASP3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23413-1", "protein_name": "CASP-like protein 1E2", "gene_name": "Dl3850w; FCAALL.348", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0CB17-1", "protein_name": "CASP-like protein 5C2", "gene_name": "F18B3.90", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L8Z1-1", "protein_name": "CASP-like protein 1E1", "gene_name": "Dl3855w; FCAALL.230", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FI10-1", "protein_name": "CASP-like protein 1B1", "gene_name": "MFC16.23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZT81-1", "protein_name": "CASP-like protein 1C1", "gene_name": "F9H3.17; T5L23.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIH4-1", "protein_name": "Casparian strip membrane protein 1", "gene_name": "CASP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SQU2-1", "protein_name": "CASP-like protein 1D2", "gene_name": "F24P17.14", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GWD5", "url": "https://www.uniprot.org/uniprotkb/Q8GWD5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 134, "end_pos": 134, "sequence_org": "D", "sequence_mut": "H", "comment": "Not detectable probably due to an impaired folding leading to instability.", "evidence": [ { "database": "UniProtKB", "id": "Q9SIH4", "url": "https://www.uniprot.org/uniprotkb/Q9SIH4" }, { "database": "PubMed", "id": "24920445", "url": "https://pubmed.ncbi.nlm.nih.gov/24920445" } ], "uniprot_canonical_ac": "Q9SIH4-1" }, { "start_pos": 158, "end_pos": 158, "sequence_org": "G", "sequence_mut": "S", "comment": "Abnormal subcellular localization.", "evidence": [ { "database": "UniProtKB", "id": "Q9SIH4", "url": "https://www.uniprot.org/uniprotkb/Q9SIH4" }, { "database": "PubMed", "id": "24920445", "url": "https://pubmed.ncbi.nlm.nih.gov/24920445" } ], "uniprot_canonical_ac": "Q9SIH4-1" }, { "start_pos": 158, "end_pos": 175, "sequence_org": "GNQSTNWLPICQQFGDFC", "sequence_mut": "", "comment": "Normal subcellular localization.", "evidence": [ { "database": "UniProtKB", "id": "Q9SIH4", "url": "https://www.uniprot.org/uniprotkb/Q9SIH4" }, { "database": "PubMed", "id": "24920445", "url": "https://pubmed.ncbi.nlm.nih.gov/24920445" } ], "uniprot_canonical_ac": "Q9SIH4-1" }, { "start_pos": 164, "end_pos": 164, "sequence_org": "W", "sequence_mut": "G", "comment": "Abnormal subcellular localization.", "evidence": [ { "database": "UniProtKB", "id": "Q9SIH4", "url": "https://www.uniprot.org/uniprotkb/Q9SIH4" }, { "database": "PubMed", "id": "24920445", "url": "https://pubmed.ncbi.nlm.nih.gov/24920445" } ], "uniprot_canonical_ac": "Q9SIH4-1" 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification and characterization of nuclear pore complex components in Arabidopsis thaliana.", "journal": "Plant Cell", "date": "2010", "authors": "Tamura Kentaro, Fukao Yoichiro, Iwamoto Masaaki, Haraguchi Tokuko, Hara-Nishimura Ikuko", "reference": { "type": "PubMed", "id": "21189294", "url": "https://pubmed.ncbi.nlm.nih.gov/21189294" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GWR1-1", "protein_name": "Aladin", "gene_name": "AAAS", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GYF7-1", "protein_name": "Nuclear pore complex protein NUP54", "gene_name": "NUP54", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LW88-1", "protein_name": "Nuclear pore complex protein NUP50B", "gene_name": "NUP50B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IGA5-1", "protein_name": "Nuclear pore complex protein NUP133", "gene_name": "NUP133", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4HXV6-1", "protein_name": "Nuclear pore complex protein NUP155", "gene_name": "NUP155", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4ID16-1", "protein_name": "Nuclear pore complex protein NUP98B", "gene_name": "DRAL; NUP98B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4KBW6-1", "protein_name": "Nuclear pore complex protein NUP205", "gene_name": "EMB3142; NUP205", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4KHD8-1", "protein_name": "Nuclear pore complex protein GP210", "gene_name": "GB210", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64740-1", "protein_name": "Protein transport protein SEC13 homolog B", "gene_name": "SEC13B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q24JJ9-1", "protein_name": "Nuclear pore complex protein NUP43", "gene_name": "NUP43", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93VR9-1", "protein_name": "Protein SEH1", "gene_name": "SEH1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L748-1", "protein_name": "Nuclear pore complex protein NUP107", "gene_name": "NUP107", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RXH2-1", "protein_name": "Nuclear pore complex protein NUP85", "gene_name": "NUP85", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04326-1", "protein_name": "Nuclear pore complex protein NUP35", "gene_name": "NUP35", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22224-1", "protein_name": "Nuclear pore complex protein NUP93A", "gene_name": "NUP93A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38942-1", "protein_name": "Protein RAE1", "gene_name": "RAE1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J284-1", "protein_name": "Nuclear pore complex protein NUP93B", "gene_name": "NUP93B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84JU6-1", "protein_name": "E3 ubiquitin-protein ligase HOS1", "gene_name": "HOS1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L7F7-1", "protein_name": "Nuclear pore complex protein NUP62", "gene_name": "NUP62", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LLD0-1", "protein_name": "Nuclear pore complex protein NUP96", "gene_name": "NUP96", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RWH9-1", "protein_name": "Nuclear pore complex protein NUP58", "gene_name": "NUP58", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RY25-1", "protein_name": "Nuclear pore complex protein NUP98A", "gene_name": "NUP98A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CAF4-1", "protein_name": "Nuclear pore complex protein NUP1", "gene_name": "NUP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C811-1", "protein_name": "Nuclear pore complex protein NUP160", "gene_name": "NUP160", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFK6-1", "protein_name": "Nuclear pore complex protein NUP88", "gene_name": "NUP88", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C829-1", "protein_name": "Nuclear pore complex protein NUP50A", "gene_name": "NUP50A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WPZ7-1", "protein_name": "mRNA export factor GLE1", "gene_name": "GLE1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A4GSN8-1", "protein_name": "Nuclear-pore anchor", "gene_name": "NUA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4I1T7-1", "protein_name": "Nuclear pore complex protein NUP214", "gene_name": "NUP214", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FWS3-1", "protein_name": "Zinc finger CCCH domain-containing protein 16", "gene_name": "CG1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GWR1", "url": "https://www.uniprot.org/uniprotkb/Q8GWR1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.21189294", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 30 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Formins: intermediates in signal-transduction cascades that affect cytoskeletal reorganization.", "journal": "Trends Plant Sci.", "date": "2002", "authors": "Deeks Michael J, Hussey Patrick J, Davies Brendan", "reference": { "type": "PubMed", "id": "12417149", "url": "https://pubmed.ncbi.nlm.nih.gov/12417149" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GX37-1", "protein_name": "Formin-like protein 9", "gene_name": "FH9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9MA60-1", "protein_name": "Formin-like protein 11", "gene_name": "FH11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LH02-1", "protein_name": "Formin-like protein 17", "gene_name": "FH17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LVN1-1", "protein_name": "Formin-like protein 13", "gene_name": "FH13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48682-1", "protein_name": "Formin-like protein 4", "gene_name": "FH4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04532-1", "protein_name": "Formin-like protein 8", "gene_name": "FH8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SK28-1", "protein_name": "Formin-like protein 18", "gene_name": "FH18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XIE0-1", "protein_name": "Formin-like protein 7", "gene_name": "FH7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRR2-1", "protein_name": "Formin-like protein 10", "gene_name": "FH10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0C5K3-1", "protein_name": "Putative formin-like protein 15b", "gene_name": "FH15B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94B77-1", "protein_name": "Formin-like protein 5", "gene_name": "FH5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C6S1-1", "protein_name": "Formin-like protein 14", "gene_name": "FH14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJX6-1", "protein_name": "Formin-like protein 6", "gene_name": "FH6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23373-1", "protein_name": "Formin-like protein 3", "gene_name": "FH3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22824-1", "protein_name": "Formin-like protein 2", "gene_name": "FH2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FF15-1", "protein_name": "Formin-like protein 16", "gene_name": "FH16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C7S1-1", "protein_name": "Formin-like protein 12", "gene_name": "FH12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FF14-1", "protein_name": "Formin-like protein 19", "gene_name": "FH19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLQ7-1", "protein_name": "Formin-like protein 20", "gene_name": "FH20; MBK20.20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0C5K4-1", "protein_name": "Putative formin-like protein 21a", "gene_name": "FH21A; MBK20.22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0C5K2-1", "protein_name": "Formin-like protein 15a", "gene_name": "FH15A; MBK20.9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0C5K5-1", "protein_name": "Formin-like protein 21b", "gene_name": "FH21B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SE97-1", "protein_name": "Formin-like protein 1", "gene_name": "FH1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GX37", "url": "https://www.uniprot.org/uniprotkb/Q8GX37" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12417149", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 23 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Formin homology 2 domains occur in multiple contexts in angiosperms.", "journal": "BMC Genomics", "date": "2004", "authors": "Cvrckov\u00e1 Fatima, Novotn\u00fd Marian, P\u00edckov\u00e1 Denisa, Z\u00e1rsk\u00fd Viktor", "reference": { "type": "PubMed", "id": "15256004", "url": "https://pubmed.ncbi.nlm.nih.gov/15256004" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GX37-1", "protein_name": "Formin-like protein 9", "gene_name": "FH9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9MA60-1", "protein_name": "Formin-like protein 11", "gene_name": "FH11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LH02-1", "protein_name": "Formin-like protein 17", "gene_name": "FH17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LVN1-1", "protein_name": "Formin-like protein 13", "gene_name": "FH13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48682-1", "protein_name": "Formin-like protein 4", "gene_name": "FH4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04532-1", "protein_name": "Formin-like protein 8", "gene_name": "FH8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SK28-1", "protein_name": "Formin-like protein 18", "gene_name": "FH18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XIE0-1", "protein_name": "Formin-like protein 7", "gene_name": "FH7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRR2-1", "protein_name": "Formin-like protein 10", "gene_name": "FH10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0C5K3-1", "protein_name": "Putative formin-like protein 15b", "gene_name": "FH15B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94B77-1", "protein_name": "Formin-like protein 5", "gene_name": "FH5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C6S1-1", "protein_name": "Formin-like protein 14", "gene_name": "FH14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FJX6-1", "protein_name": "Formin-like protein 6", "gene_name": "FH6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23373-1", "protein_name": "Formin-like protein 3", "gene_name": "FH3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22824-1", "protein_name": "Formin-like protein 2", "gene_name": "FH2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FF15-1", "protein_name": "Formin-like protein 16", "gene_name": "FH16", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C7S1-1", "protein_name": "Formin-like protein 12", "gene_name": "FH12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FF14-1", "protein_name": "Formin-like protein 19", "gene_name": "FH19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLQ7-1", "protein_name": "Formin-like protein 20", "gene_name": "FH20; MBK20.20", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0C5K4-1", "protein_name": "Putative formin-like protein 21a", "gene_name": "FH21A; MBK20.22", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0C5K2-1", "protein_name": "Formin-like protein 15a", "gene_name": "FH15A; MBK20.9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0C5K5-1", "protein_name": "Formin-like protein 21b", "gene_name": "FH21B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SE97-1", "protein_name": "Formin-like protein 1", "gene_name": "FH1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GX37", "url": "https://www.uniprot.org/uniprotkb/Q8GX37" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15256004", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 23 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "4'-phosphopantetheine and coenzyme A biosynthesis in plants.", "journal": "The Journal of biological chemistry", "date": "2003-10-03", "authors": "Kupke Thomas, Hern\u00e1ndez-Acosta Pilar, Culi\u00e1\u00f1ez-Maci\u00e0 Francisco A", "reference": { "type": "PubMed", "id": "12860978", "url": "https://pubmed.ncbi.nlm.nih.gov/12860978" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GXR5-1", "protein_name": "Phosphopantothenate--cysteine ligase 1", "gene_name": "PPCS1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80765-1", "protein_name": "Pantothenate kinase 1", "gene_name": "PANK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZQH0-1", "protein_name": "Dephospho-CoA kinase", "gene_name": "COAE", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZPV8-1", "protein_name": "Phosphopantetheine adenylyltransferase", "gene_name": "COAD", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SWE5-1", "protein_name": "Phosphopantothenoylcysteine decarboxylase", "gene_name": "HAL3A", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GXR5", "url": "https://www.uniprot.org/uniprotkb/Q8GXR5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12860978", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": 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}, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Comparative genomic study of the thioredoxin family in photosynthetic organisms with emphasis on Populus trichocarpa.", "journal": "Mol. Plant", "date": "2009", "authors": "Chibani Kamel, Wingsle Gunnar, Jacquot Jean-Pierre, Gelhaye Eric, Rouhier Nicolas", "reference": { "type": "PubMed", "id": "19825616", "url": "https://pubmed.ncbi.nlm.nih.gov/19825616" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GXV2-1", "protein_name": "Thioredoxin-like protein CXXS2", "gene_name": "CXXS2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39239-1", "protein_name": "Thioredoxin H4", "gene_name": "TRX4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NPF9-1", "protein_name": "Thioredoxin Y1, chloroplastic", "gene_name": "F28O16.13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXZ8-1", "protein_name": "Putative thioredoxin H10", "gene_name": "T5P19.70", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M7X9-1", "protein_name": "Thioredoxin-like protein CITRX, chloroplastic", "gene_name": "CITRX", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64654-1", "protein_name": "Thioredoxin-like 1-1, chloroplastic", "gene_name": "ACHT4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80763-1", "protein_name": "Probable nucleoredoxin 1", "gene_name": "T13D8.29", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XFI1-1", "protein_name": "Thioredoxin-like 1-2, chloroplastic", "gene_name": "ACHT5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XIF4-1", "protein_name": "Thioredoxin H7", "gene_name": "TRX7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LCT3-1", "protein_name": "Thioredoxin-like 2-2, chloroplastic", "gene_name": "T16L4.180", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LD49-1", "protein_name": "Thioredoxin X, chloroplastic", "gene_name": "ATHX", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LEK4-1", "protein_name": "Thioredoxin-like 2-1, chloroplastic", "gene_name": "F20B18.270", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LDI5-1", "protein_name": "Thioredoxin-like protein CXXS1", "gene_name": "CXXS1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZT6-1", "protein_name": "Thioredoxin-like 3-2, chloroplastic", "gene_name": "WCRKC2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93VQ9-1", "protein_name": "Thioredoxin O2, mitochondrial", "gene_name": "F17F8.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C5C5-1", "protein_name": "Thioredoxin-like 4, chloroplastic", "gene_name": "F24B9.21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SGS4-1", "protein_name": "Thioredoxin-like protein CDSP32, chloroplastic", "gene_name": "CDSP32", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22779-1", "protein_name": "Thioredoxin-like 1-3, chloroplastic", "gene_name": "F4P9.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LCH9-1", "protein_name": "Thioredoxin-like 3-3", "gene_name": "T4D2.150", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZQ0-1", "protein_name": "Probable nucleoredoxin 3", "gene_name": "F8F16.60", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CAS1-1", "protein_name": "Thioredoxin H8", "gene_name": "TRX8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XFH8-1", "protein_name": "Thioredoxin F1, chloroplastic", "gene_name": "F13E7.33", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8L7S9-1", "protein_name": "Thioredoxin Y2, chloroplastic", "gene_name": "T10P12.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VWG7-1", "protein_name": "TPR repeat-containing thioredoxin TDX", "gene_name": "TDX", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23166-1", "protein_name": "Thioredoxin-like protein HCF164, chloroplastic", "gene_name": "HCF164", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48737-1", "protein_name": "Thioredoxin M1, chloroplastic", "gene_name": "F21B7.28; 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GAT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SEU8-1", "protein_name": "Thioredoxin M2, chloroplastic", "gene_name": "ATHM2; TRXM2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SEU6-1", "protein_name": "Thioredoxin M4, chloroplastic", "gene_name": "MJK13.2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GXV2", "url": "https://www.uniprot.org/uniprotkb/Q8GXV2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19825616", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 38 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Intron position as an evolutionary marker of thioredoxins and thioredoxin domains.", "journal": "J. Mol. Evol.", "date": "1996", "authors": "Sahrawy M, Hecht V, Lopez-Jaramillo J, Chueca A, Chartier Y, Meyer Y", "reference": { "type": "PubMed", "id": "8642611", "url": "https://pubmed.ncbi.nlm.nih.gov/8642611" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GXV2-1", "protein_name": "Thioredoxin-like protein CXXS2", "gene_name": "CXXS2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39239-1", "protein_name": "Thioredoxin H4", "gene_name": "TRX4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P29448-1", "protein_name": "Thioredoxin H1", "gene_name": "TRX1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q42403-1", "protein_name": "Thioredoxin H3", "gene_name": "TRX3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38879-1", "protein_name": "Thioredoxin H2", "gene_name": "TRX2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39241-1", "protein_name": "Thioredoxin H5", "gene_name": "TRX5", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GXV2", "url": "https://www.uniprot.org/uniprotkb/Q8GXV2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.8642611", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular cloning of two Arabidopsis UDP-galactose transporters by complementation of a deficient Chinese hamster ovary cell line.", "journal": "Glycobiology", "date": "2005", "authors": "Bakker Hans, Routier Fran\u00e7oise, Oelmann Stefan, Jordi Wilco, Lommen Arjen, Gerardy-Schahn Rita, Bosch Dirk", "reference": { "type": "PubMed", "id": "15456736", "url": "https://pubmed.ncbi.nlm.nih.gov/15456736" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GY97-1", "protein_name": "CMP-sialic acid transporter 2", "gene_name": "F14B2.18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q29Q28-1", "protein_name": "UDP-galactose/UDP-glucose transporter 2", "gene_name": "UTR2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LDX3-1", "protein_name": "UDP-galactose/UDP-glucose transporter 4", "gene_name": "UTR4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64503-1", "protein_name": "UDP-galactose/UDP-glucose transporter 1", "gene_name": "UTR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94B65-1", "protein_name": "UDP-galactose/UDP-glucose transporter 7", "gene_name": "UTR7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C521-1", "protein_name": "UDP-galactose transporter 1", "gene_name": "UDP-GALT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LGE9-1", "protein_name": "CMP-sialic acid transporter 1", "gene_name": "K16L22.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NM25-1", "protein_name": "UDP-galactose/UDP-glucose transporter 5", "gene_name": "UTR5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NMB6-1", "protein_name": "UDP-galactose/UDP-glucose transporter 5B", "gene_name": "UTR5B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LES0-1", "protein_name": "UDP-N-acetylglucosamine transporter ROCK1", "gene_name": "ROCK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C5H6-1", "protein_name": "CMP-sialic acid transporter 3", "gene_name": "UTR6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M9S6-1", "protein_name": "UDP-galactose/UDP-glucose transporter 3", "gene_name": "UTR3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRE4-1", "protein_name": "UDP-rhamnose/UDP-galactose transporter 1", "gene_name": "URGT1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GY97", "url": "https://www.uniprot.org/uniprotkb/Q8GY97" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15456736", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 13 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Golgi localized bifunctional UDP-rhamnose/UDP-galactose transporter family of Arabidopsis.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "2014", "authors": "Rautengarten Carsten, Ebert Berit, Moreno Ignacio, Temple Henry, Herter Thomas, Link Bruce, Do\u00f1as-Cofr\u00e9 Daniela, Moreno Adri\u00e1n, Sa\u00e9z-Aguayo Susana, Blanco Francisca, Mortimer Jennifer C, Schultink Alex, Reiter Wolf-Dieter, Dupree Paul, Pauly Markus, Heazlewood Joshua L, Scheller Henrik V, Orellana Ariel", "reference": { "type": "PubMed", "id": "25053812", "url": "https://pubmed.ncbi.nlm.nih.gov/25053812" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GY97-1", "protein_name": "CMP-sialic acid transporter 2", "gene_name": "F14B2.18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S845-1", "protein_name": "GDP-mannose transporter GONST3", "gene_name": "GONST3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SFE9-1", "protein_name": "GDP-mannose transporter GONST5", "gene_name": "GONST5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q29Q28-1", "protein_name": "UDP-galactose/UDP-glucose transporter 2", "gene_name": "UTR2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LU76-1", "protein_name": "Nucleotide-sugar uncharacterized transporter 1", "gene_name": "MUL3.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LNH5-1", "protein_name": "Probable sugar phosphate/phosphate translocator At1g48230", "gene_name": "F11A17.21; F21D18.5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LDH3-1", "protein_name": "Probable sugar phosphate/phosphate translocator At1g12500", "gene_name": "F5O11.25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LDX3-1", "protein_name": "UDP-galactose/UDP-glucose transporter 4", "gene_name": "UTR4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LFN3-1", "protein_name": "Probable sugar phosphate/phosphate translocator At5g11230", "gene_name": "F2I11.120", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LRP2-1", "protein_name": "Probable sugar phosphate/phosphate translocator At3g17430", "gene_name": "MTO12.2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A8MRY9-1", "protein_name": "UDP-N-acetylglucosamine transporter UGNT1", "gene_name": "UGNT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64503-1", "protein_name": "UDP-galactose/UDP-glucose transporter 1", "gene_name": "UTR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SKJ7-1", "protein_name": "Probable sugar phosphate/phosphate translocator At2g25520", "gene_name": "F13B15.18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SS40-1", "protein_name": "Probable sugar phosphate/phosphate translocator At3g10290", "gene_name": "F14P13.11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SUV2-1", "protein_name": "Probable sugar phosphate/phosphate translocator At4g32390", "gene_name": "F8B4.90", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94B38-1", "protein_name": "Glucose-6-phosphate/phosphate translocator 2, chloroplastic", "gene_name": "GPT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94B65-1", "protein_name": "UDP-galactose/UDP-glucose transporter 7", "gene_name": "UTR7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3E6T0-1", "protein_name": "Probable sugar phosphate/phosphate translocator At5g25400", "gene_name": "F18G18.140", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RXL8-1", "protein_name": "UDP-xylose transporter 3", "gene_name": "UXT3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FIH5-1", "protein_name": "UDP-rhamnose/UDP-galactose transporter 3", "gene_name": "URGT3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C521-1", "protein_name": "UDP-galactose transporter 1", "gene_name": "UDP-GALT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FYE5-1", "protein_name": "UDP-URONIC ACID TRANSPORTER 1", "gene_name": "UUAT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LF61-1", "protein_name": "Xylulose 5-phosphate/phosphate translocator, chloroplastic", "gene_name": "XPT", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LPU2-1", "protein_name": "UDP-rhamnose/UDP-galactose transporter 2", "gene_name": "URGT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LGE9-1", "protein_name": "CMP-sialic acid transporter 1", "gene_name": "K16L22.3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JN00-1", "protein_name": "CMP-sialic acid transporter 4", "gene_name": "DL4585C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NM25-1", "protein_name": "UDP-galactose/UDP-glucose transporter 5", "gene_name": "UTR5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q5XF09-1", "protein_name": "Probable sugar phosphate/phosphate translocator At3g11320", "gene_name": "F11B9.28", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6DBP3-1", "protein_name": "Probable sugar phosphate/phosphate translocator At5g05820", "gene_name": "MJJ3.24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NMB6-1", "protein_name": "UDP-galactose/UDP-glucose transporter 5B", "gene_name": "UTR5B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H184-1", "protein_name": "Probable sugar phosphate/phosphate translocator At1g06470", "gene_name": "F12K11.18", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94EI9-1", "protein_name": "Probable sugar phosphate/phosphate translocator At3g14410", "gene_name": "MLN21.19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8M1-1", "protein_name": "Probable sugar phosphate/phosphate translocator At1g53660", "gene_name": "F22G10.26; F22G10_26", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FG70-1", "protein_name": "Nucleotide-sugar uncharacterized transporter 2", "gene_name": "MYN21.6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81514-1", "protein_name": "Putative glucose-6-phosphate/phosphate-translocator-like protein 1", "gene_name": "T24M8.5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RWW7-1", "protein_name": "UDP-rhamnose/UDP-galactose transporter 4", "gene_name": "NST-K1; URGT4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LES0-1", "protein_name": "UDP-N-acetylglucosamine transporter ROCK1", "gene_name": "ROCK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RXN3-1", "protein_name": "Phosphoenolpyruvate/phosphate translocator 1, chloroplastic", "gene_name": "PPT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q941R4-1", "protein_name": "GDP-mannose transporter GONST1", "gene_name": "GONST1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FDZ5-1", "protein_name": "UDP-rhamnose/UDP-galactose transporter 6", "gene_name": "URGT6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8H0T6-1", "protein_name": "Phosphoenolpyruvate/phosphate translocator 2, chloroplastic", "gene_name": "PPT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GUJ1-1", "protein_name": "UDP-xylose transporter 2", "gene_name": "UXT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84L09-1", "protein_name": "GDP-mannose transporter GONST2", "gene_name": "GONST2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84L08-1", "protein_name": "GDP-fucose transporter 1", "gene_name": "GFT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C5H6-1", "protein_name": "CMP-sialic acid transporter 3", "gene_name": "UTR6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IHS9-1", "protein_name": "UDP-xylose transporter 1", "gene_name": "LOG1; UXT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZ96-1", "protein_name": "UDP-rhamnose/UDP-galactose transporter 5", "gene_name": "URGT5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M5A9-1", "protein_name": "Glucose-6-phosphate/phosphate translocator 1, chloroplastic", "gene_name": "GPT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M9S6-1", "protein_name": "UDP-galactose/UDP-glucose transporter 3", "gene_name": "UTR3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRE4-1", "protein_name": "UDP-rhamnose/UDP-galactose transporter 1", "gene_name": "URGT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZSR7-1", "protein_name": "Triose phosphate/phosphate translocator TPT, chloroplastic", "gene_name": "APE2; TPT", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GY97", "url": "https://www.uniprot.org/uniprotkb/Q8GY97" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.25053812", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 51 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular and functional characterization of a family of amino acid transporters from Arabidopsis.", "journal": "Plant physiology", "date": "2004-10", "authors": "Su Yan-Hua, Frommer Wolf B, Ludewig Uwe", "reference": { "type": "PubMed", "id": "15377779", "url": "https://pubmed.ncbi.nlm.nih.gov/15377779" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GYB4-1", "protein_name": "Cationic amino acid transporter 3, mitochondrial", "gene_name": "CAT3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZ20-1", "protein_name": "Cationic amino acid transporter 6, chloroplastic", "gene_name": "CAT6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SHH0-1", "protein_name": "Cationic amino acid transporter 8, vacuolar", "gene_name": "CAT8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C5D6-1", "protein_name": "Cationic amino acid transporter 9, chloroplastic", "gene_name": "CAT9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8W4K3-1", "protein_name": "Cationic amino acid transporter 4, vacuolar", "gene_name": "CAT4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ASS7-1", "protein_name": "Cationic amino acid transporter 2, vacuolar", "gene_name": "CAT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64759-1", "protein_name": "Cationic amino acid transporter 5", "gene_name": "CAT5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84MA5-1", "protein_name": "Cationic amino acid transporter 1", "gene_name": "AAT1; CAT1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GYB4", "url": "https://www.uniprot.org/uniprotkb/Q8GYB4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15377779", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 8 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Phylogenetic analyses identify 10 classes of the protein disulfide isomerase family in plants, including single-domain protein disulfide isomerase-related proteins.", "journal": "Plant Physiol.", "date": "2005", "authors": "Houston Norma L, Fan Chuanzhu, Xiang Jenny Qiu-Yun, Schulze Jan-Michael, Jung Rudolf, Boston Rebecca S", "reference": { "type": "PubMed", "id": "15684019", "url": "https://pubmed.ncbi.nlm.nih.gov/15684019" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GYD1-1", "protein_name": "Protein disulfide-isomerase 5-1", "gene_name": "PDIL5-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q66GQ3-1", "protein_name": "Protein disulfide isomerase-like 1-6", "gene_name": "PDIL1-6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22263-1", "protein_name": "Protein disulfide-isomerase like 2-1", "gene_name": "PDIL2-1; UNE5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A3KPF5-1", "protein_name": "Protein disulfide isomerase-like 1-5", "gene_name": "PDIL1-5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FF55-1", "protein_name": "Protein disulfide isomerase-like 1-4", "gene_name": "PDIL1-4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T042-1", "protein_name": "Protein disulfide-isomerase 5-4", "gene_name": "PDIL5-4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VX13-1", "protein_name": "Protein disulfide isomerase-like 1-3", "gene_name": "PDIL1-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48773-1", "protein_name": "Protein disulfide-isomerase 2-3", "gene_name": "PDIL2-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XI01-1", "protein_name": "Protein disulfide isomerase-like 1-1", "gene_name": "PDIL1-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94F09-1", "protein_name": "Protein disulfide-isomerase 5-2", "gene_name": "PDIL5-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJU2-1", "protein_name": "Protein disulfide-isomerase 5-3", "gene_name": "PDIL5-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9MAU6-1", "protein_name": "Protein disulfide-isomerase like 2-2", "gene_name": "PDIL2-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRG3-1", "protein_name": "Protein disulfide isomerase-like 1-2", "gene_name": "PDIL1-2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GYD1", "url": "https://www.uniprot.org/uniprotkb/Q8GYD1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15684019", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 13 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The protein disulfide isomerase gene family in bread wheat (T. aestivum L.).", "journal": "BMC Plant Biol.", "date": "2010", "authors": "d'Aloisio Elisa, Paolacci Anna R, Dhanapal Arun P, Tanzarella Oronzo A, Porceddu Enrico, Ciaffi Mario", "reference": { "type": "PubMed", "id": "20525253", "url": "https://pubmed.ncbi.nlm.nih.gov/20525253" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GYD1-1", "protein_name": "Protein disulfide-isomerase 5-1", "gene_name": "PDIL5-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q66GQ3-1", "protein_name": "Protein disulfide isomerase-like 1-6", "gene_name": "PDIL1-6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22263-1", "protein_name": "Protein disulfide-isomerase like 2-1", "gene_name": "PDIL2-1; UNE5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A3KPF5-1", "protein_name": "Protein disulfide isomerase-like 1-5", "gene_name": "PDIL1-5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FF55-1", "protein_name": "Protein disulfide isomerase-like 1-4", "gene_name": "PDIL1-4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T042-1", "protein_name": "Protein disulfide-isomerase 5-4", "gene_name": "PDIL5-4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VX13-1", "protein_name": "Protein disulfide isomerase-like 1-3", "gene_name": "PDIL1-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48773-1", "protein_name": "Protein disulfide-isomerase 2-3", "gene_name": "PDIL2-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XI01-1", "protein_name": "Protein disulfide isomerase-like 1-1", "gene_name": "PDIL1-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94F09-1", "protein_name": "Protein disulfide-isomerase 5-2", "gene_name": "PDIL5-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJU2-1", "protein_name": "Protein disulfide-isomerase 5-3", "gene_name": "PDIL5-3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9MAU6-1", "protein_name": "Protein disulfide-isomerase like 2-2", "gene_name": "PDIL2-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRG3-1", "protein_name": "Protein disulfide isomerase-like 1-2", "gene_name": "PDIL1-2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GYD1", "url": "https://www.uniprot.org/uniprotkb/Q8GYD1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.20525253", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 13 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The gene family encoding the Arabidopsis thaliana translation elongation factor EF-1 alpha: molecular cloning, characterization and expression.", "journal": "Mol. Gen. Genet.", "date": "1989", "authors": "Axelos M, Bardet C, Liboz T, Le Van Thai A, Curie C, Lescure B", "reference": { "type": "PubMed", "id": "2615757", "url": "https://pubmed.ncbi.nlm.nih.gov/2615757" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GYD1-1", "protein_name": "Protein disulfide-isomerase 5-1", "gene_name": "PDIL5-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DH99-1", "protein_name": "Elongation factor 1-alpha 1", "gene_name": "A1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96305-1", "protein_name": "Glutaredoxin-C7", "gene_name": "GRXC7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S763-1", "protein_name": "Probable WRKY transcription factor 45", "gene_name": "WRKY45", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GYD1", "url": "https://www.uniprot.org/uniprotkb/Q8GYD1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.2615757", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Expression analysis suggests novel roles for members of the Pht1 family of phosphate transporters in Arabidopsis.", "journal": "Plant J.", "date": "2002", "authors": "Mudge Stephen R, Rae Anne L, Diatloff Eugene, Smith Frank W", "reference": { "type": "PubMed", "id": "12164813", "url": "https://pubmed.ncbi.nlm.nih.gov/12164813" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GYF4-1", "protein_name": "Probable inorganic phosphate transporter 1-5", "gene_name": "PHT1-5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYQ1-1", "protein_name": "Probable inorganic phosphate transporter 1-8", "gene_name": "PHT1-8; 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Biol.", "date": "2004", "authors": "Misson Julie, Thibaud Marie-Christine, Bechtold Nicole, Raghothama Kashchandra, Nussaume Laurent", "reference": { "type": "PubMed", "id": "15604713", "url": "https://pubmed.ncbi.nlm.nih.gov/15604713" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GYF4-1", "protein_name": "Probable inorganic phosphate transporter 1-5", "gene_name": "PHT1-5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYQ1-1", "protein_name": "Probable inorganic phosphate transporter 1-8", "gene_name": "PHT1-8; PHT1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q494P0-1", "protein_name": "Probable inorganic phosphate transporter 1-7", "gene_name": "PHT1-7", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S735-1", "protein_name": "Probable inorganic phosphate transporter 1-9", "gene_name": "PHT1-9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96303-1", "protein_name": "Inorganic 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "The ankyrin-repeat transmembrane protein BDA1 functions downstream of the receptor-like protein SNC2 to regulate plant immunity.", "journal": "Plant physiology", "date": "2012-08", "authors": "Yang Yuanai, Zhang Yaxi, Ding Pingtao, Johnson Kaeli, Li Xin, Zhang Yuelin", "reference": { "type": "PubMed", "id": "22740615", "url": "https://pubmed.ncbi.nlm.nih.gov/22740615" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GYH5-1", "protein_name": "Ankyrin repeat-containing protein BDA1", "gene_name": "BAD1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8GYH5", "url": "https://www.uniprot.org/uniprotkb/Q8GYH5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 330, "end_pos": 330, "sequence_org": "G", "sequence_mut": "E", "comment": "In bad1-17D; gain-of-function mutant. 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Accumulation of SUMO1 and -2 conjugates is increased by stress.", "journal": "J. Biol. Chem.", "date": "2003", "authors": "Kurepa Jasmina, Walker Joseph M, Smalle Jan, Gosink Mark M, Davis Seth J, Durham Tessa L, Sung Dong-Yul, Vierstra Richard D", "reference": { "type": "PubMed", "id": "12482876", "url": "https://pubmed.ncbi.nlm.nih.gov/12482876" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GYL3-1", "protein_name": "Ubiquitin-like-specific protease 1A", "gene_name": "ULP1A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VY78-1", "protein_name": "SUMO-activating enzyme subunit 1A", "gene_name": "SAE1A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLP6-1", "protein_name": "Small ubiquitin-related modifier 2", "gene_name": "SUMO2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZI7-1", "protein_name": "Small ubiquitin-related modifier 5", "gene_name": "SUMO5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O65278-1", "protein_name": "Putative ubiquitin-like-specific 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Evolution of a signalling system that incorporates both redundancy and diversity: Arabidopsis SUMOylation.", "journal": "The Biochemical journal", "date": "2006-09-15", "authors": "Chosed Renee, Mukherjee Sohini, Lois Luisa Maria, Orth Kim", "reference": { "type": "PubMed", "id": "16740136", "url": "https://pubmed.ncbi.nlm.nih.gov/16740136" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8GYL3-1", "protein_name": "Ubiquitin-like-specific protease 1A", "gene_name": "ULP1A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94F30-1", "protein_name": "Ubiquitin-like-specific protease ESD4", "gene_name": "ESD4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O65278-1", "protein_name": "Putative ubiquitin-like-specific protease 1B", "gene_name": "ULP1B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RWN0-1", "protein_name": "Ubiquitin-like-specific protease 1C", 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