[ { "title": "The human homolog of Saccharomyces cerevisiae CDC45.", "journal": "The Journal of biological chemistry", "date": "1998", "authors": "Saha P, Thome KC, Yamaguchi R, Hou Z, Weremowicz S, Dutta A", "reference": { "type": "PubMed", "id": "9660782", "url": "https://pubmed.ncbi.nlm.nih.gov/9660782" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P56282-1", "protein_name": "DNA polymerase epsilon subunit 2", "gene_name": "POLE2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14566-1", "protein_name": "DNA replication licensing factor MCM6", "gene_name": "MCM6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBD5-1", "protein_name": "Origin recognition complex subunit 3", "gene_name": "ORC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13415-1", "protein_name": "Origin recognition complex subunit 1", "gene_name": "ORC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13416-1", "protein_name": "Origin recognition complex 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"uniprot_canonical_ac": "Q13156-1", "protein_name": "Replication protein A 30 kDa subunit", "gene_name": "RPA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49642-1", "protein_name": "DNA primase small subunit", "gene_name": "PRIM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35244-1", "protein_name": "Replication protein A 14 kDa subunit", "gene_name": "RPA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00311-1", "protein_name": "Cell division cycle 7-related protein kinase", "gene_name": "CDC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBU7-1", "protein_name": "Protein DBF4 homolog A", "gene_name": "DBF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27694-1", "protein_name": "Replication protein A 70 kDa DNA-binding subunit", "gene_name": "RPA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33993-1", "protein_name": "DNA replication licensing factor MCM7", "gene_name": "MCM7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75496-1", "protein_name": "Geminin", "gene_name": "GMNN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75419-1", "protein_name": "Cell division control protein 45 homolog", "gene_name": "CDC45", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43913-1", "protein_name": "Origin recognition complex subunit 5", "gene_name": "ORC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49736-1", "protein_name": "DNA replication licensing factor MCM2", "gene_name": "MCM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15927-1", "protein_name": "Replication protein A 32 kDa subunit", "gene_name": "RPA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25205-1", "protein_name": "DNA replication licensing factor MCM3", "gene_name": "MCM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33992-1", "protein_name": "DNA replication licensing factor MCM5", "gene_name": "MCM5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43929-1", "protein_name": "Origin recognition complex subunit 4", "gene_name": "ORC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24941-1", "protein_name": "Cyclin-dependent kinase 2", "gene_name": "CDK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99741-1", "protein_name": "DNA replication factor CDC6", "gene_name": "CDC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09884-1", "protein_name": "DNA polymerase alpha catalytic subunit", "gene_name": "POLA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5N6-1", "protein_name": "Origin recognition complex subunit 6", "gene_name": "ORC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33991-1", "protein_name": "DNA replication licensing factor MCM4", "gene_name": "MCM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJA3-1", "protein_name": "DNA helicase MCM8", "gene_name": "MCM8", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P56282", "url": "https://www.uniprot.org/uniprotkb/P56282" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9660782", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 33 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mammalian base excision repair by DNA polymerases delta and epsilon.", "journal": "Oncogene", "date": "1998", "authors": "Stucki M, Pascucci B, Parlanti E, Fortini P, Wilson SH, Hubscher U, Dogliotti E", "reference": { "type": "PubMed", "id": "9780000", "url": "https://pubmed.ncbi.nlm.nih.gov/9780000" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P56282-1", "protein_name": "DNA polymerase epsilon subunit 2", "gene_name": "POLE2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU8-1", "protein_name": "DNA polymerase delta subunit 4", "gene_name": "POLD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07864-1", "protein_name": "DNA polymerase epsilon catalytic subunit A", "gene_name": "POLE", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28340-1", "protein_name": "DNA polymerase delta catalytic subunit", "gene_name": "POLD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR33-1", "protein_name": "DNA polymerase epsilon subunit 4", "gene_name": "POLE4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRF9-1", "protein_name": "DNA polymerase epsilon subunit 3", "gene_name": "POLE3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35249-1", "protein_name": "Replication factor C subunit 4", "gene_name": "RFC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35244-1", "protein_name": "Replication protein A 14 kDa subunit", "gene_name": "RPA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35251-1", "protein_name": "Replication factor C subunit 1", "gene_name": "RFC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18858-1", "protein_name": "DNA ligase 1", "gene_name": "LIG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27694-1", "protein_name": "Replication protein A 70 kDa DNA-binding subunit", "gene_name": "RPA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39748-1", "protein_name": "Flap endonuclease 1", "gene_name": "FEN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35250-1", "protein_name": "Replication factor C subunit 2", "gene_name": "RFC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15054-1", "protein_name": "DNA polymerase delta subunit 3", "gene_name": "POLD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49005-1", "protein_name": "DNA polymerase delta subunit 2", "gene_name": "POLD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06746-1", "protein_name": "DNA polymerase beta", "gene_name": "POLB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15927-1", "protein_name": "Replication protein A 32 kDa subunit", "gene_name": "RPA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27695-1", "protein_name": "DNA repair nuclease/redox regulator APEX1", "gene_name": "APEX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40938-1", "protein_name": "Replication factor C subunit 3", "gene_name": "RFC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12004-1", "protein_name": "DNA sliding clamp PCNA", "gene_name": "PCNA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40937-1", "protein_name": "Replication factor C subunit 5", "gene_name": "RFC5", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P56282", "url": "https://www.uniprot.org/uniprotkb/P56282" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9780000", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 21 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Nectin/PRR: an immunoglobulin-like cell adhesion molecule recruited to cadherin-based adherens junctions through interaction with Afadin, a PDZ domain-containing protein.", "journal": "The Journal of cell biology", "date": "1999", "authors": "Takahashi K, Nakanishi H, Miyahara M, Mandai K, Satoh K, Satoh A, Nishioka H, Aoki J, Nomoto A, Mizoguchi A, Takai Y", "reference": { "type": "PubMed", "id": "10225955", "url": "https://pubmed.ncbi.nlm.nih.gov/10225955" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q92692-1", "protein_name": "Nectin-2", "gene_name": "NECTIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQS3-1", "protein_name": "Nectin-3", "gene_name": "NECTIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55286-1", "protein_name": "Cadherin-8", "gene_name": "CDH8", "tax_name": "Human" }, { 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P55290-1", "protein_name": "Cadherin-13", "gene_name": "CDH13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35222-1", "protein_name": "Catenin beta-1", "gene_name": "CTNNB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63261-1", "protein_name": "Actin, cytoplasmic 2", "gene_name": "ACTG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35221-1", "protein_name": "Catenin alpha-1", "gene_name": "CTNNA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14923-1", "protein_name": "Junction plakoglobin", "gene_name": "JUP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P03950-1", "protein_name": "Angiogenin", "gene_name": "ANG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60716-1", "protein_name": "Catenin delta-1", "gene_name": "CTNND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33151-1", "protein_name": "Cadherin-5", "gene_name": "CDH5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N126-1", 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structural features of nectin-2 (HveB) required for herpes simplex virus entry.", "journal": "Journal of virology", "date": "2001", "authors": "Martinez WM, Spear PG", "reference": { "type": "PubMed", "id": "11602758", "url": "https://pubmed.ncbi.nlm.nih.gov/11602758" }, 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No effect on PRV entry.", "evidence": [ { "database": "UniProtKB", "id": "Q92692", "url": "https://www.uniprot.org/uniprotkb/Q92692" }, { "database": "PubMed", "id": "11602758", "url": "https://pubmed.ncbi.nlm.nih.gov/11602758" } ], "uniprot_canonical_ac": "Q92692-1" }, { "start_pos": 89, "end_pos": 89, "sequence_org": "M", "sequence_mut": "I", "comment": "Increased entry of HHV-1/Rid1 and HSV-2.", "evidence": [ { "database": "UniProtKB", "id": "Q92692", "url": "https://www.uniprot.org/uniprotkb/Q92692" }, { "database": "PubMed", "id": "11602758", "url": "https://pubmed.ncbi.nlm.nih.gov/11602758" } ], "uniprot_canonical_ac": "Q92692-1" } ], "record_id": "pubmed.11602758", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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"glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The tumor suppressor protein TSLC1 is involved in cell-cell adhesion.", "journal": "The Journal of biological chemistry", "date": "2002", "authors": "Masuda M, Yageta M, Fukuhara H, Kuramochi M, Maruyama T, Nomoto A, Murakami Y", "reference": { "type": "PubMed", "id": "12050160", "url": "https://pubmed.ncbi.nlm.nih.gov/12050160" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q92692-1", "protein_name": "Nectin-2", "gene_name": "NECTIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQS3-1", "protein_name": "Nectin-3", "gene_name": "NECTIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55286-1", "protein_name": "Cadherin-8", "gene_name": "CDH8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55289-1", "protein_name": "Cadherin-12", "gene_name": "CDH12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13634-1", "protein_name": "Cadherin-18", "gene_name": "CDH18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12864-1", "protein_name": "Cadherin-17", "gene_name": "CDH17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULB4-1", "protein_name": "Cadherin-9", "gene_name": "CDH9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22223-1", "protein_name": "Cadherin-3", "gene_name": "CDH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55283-1", "protein_name": "Cadherin-4", "gene_name": "CDH4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6N8-1", "protein_name": "Cadherin-10", "gene_name": "CDH10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55291-1", "protein_name": "Cadherin-15", "gene_name": "CDH15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86UP0-1", "protein_name": "Cadherin-24", "gene_name": "CDH24", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55290-1", "protein_name": "Cadherin-13", "gene_name": "CDH13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35222-1", "protein_name": "Catenin beta-1", "gene_name": "CTNNB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63261-1", "protein_name": "Actin, cytoplasmic 2", "gene_name": "ACTG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35221-1", "protein_name": "Catenin alpha-1", "gene_name": "CTNNA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14923-1", "protein_name": "Junction plakoglobin", "gene_name": "JUP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P03950-1", "protein_name": "Angiogenin", "gene_name": "ANG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60716-1", "protein_name": "Catenin 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"uniprot_canonical_ac": "Q8N3J6-1", "protein_name": "Cell adhesion molecule 2", "gene_name": "CADM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NY8-1", "protein_name": "Nectin-4", "gene_name": "NECTIN4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15223-1", "protein_name": "Nectin-1", "gene_name": "NECTIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q92692", "url": "https://www.uniprot.org/uniprotkb/Q92692" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12050160", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 31 } ], "sort_fields": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Recruitment of nectin-3 to cell-cell junctions through trans-heterophilic interaction with CD155, a vitronectin and poliovirus receptor that localizes to alpha(v)beta3 integrin-containing membrane microdomains.", "journal": "The Journal of biological chemistry", "date": "2003", "authors": "Mueller S, Wimmer E", "reference": { "type": "PubMed", "id": "12759359", "url": "https://pubmed.ncbi.nlm.nih.gov/12759359" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q92692-1", "protein_name": "Nectin-2", "gene_name": "NECTIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15151-1", "protein_name": "Poliovirus receptor", "gene_name": "PVR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQS3-1", "protein_name": "Nectin-3", "gene_name": "NECTIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N126-1", "protein_name": "Cell adhesion molecule 3", "gene_name": "CADM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY67-1", "protein_name": "Cell adhesion molecule 1", "gene_name": "CADM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NY8-1", "protein_name": "Nectin-4", "gene_name": "NECTIN4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15223-1", "protein_name": "Nectin-1", "gene_name": "NECTIN1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q92692", "url": "https://www.uniprot.org/uniprotkb/Q92692" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12759359", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Nectin-like molecule-1/TSLL1/SynCAM3: a neural tissue-specific immunoglobulin-like cell-cell adhesion molecule localizing at non-junctional contact sites of presynaptic nerve terminals, axons and glia cell processes.", "journal": "Journal of cell science", "date": "2005", "authors": "Kakunaga S, Ikeda W, Itoh S, Deguchi-Tawarada M, Ohtsuka T, Mizoguchi A, Takai Y", "reference": { "type": "PubMed", "id": "15741237", "url": "https://pubmed.ncbi.nlm.nih.gov/15741237" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q92692-1", "protein_name": "Nectin-2", "gene_name": "NECTIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15151-1", "protein_name": "Poliovirus receptor", "gene_name": "PVR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQS3-1", "protein_name": "Nectin-3", "gene_name": "NECTIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N126-1", "protein_name": "Cell adhesion molecule 3", "gene_name": "CADM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY67-1", "protein_name": "Cell adhesion molecule 1", "gene_name": "CADM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NY8-1", "protein_name": "Nectin-4", "gene_name": "NECTIN4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15223-1", "protein_name": "Nectin-1", "gene_name": "NECTIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9JLB9-1", "protein_name": "Nectin-3", "gene_name": "Nectin3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q99N28-1", "protein_name": "Cell adhesion molecule 3", "gene_name": "Cadm3", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q92692", "url": "https://www.uniprot.org/uniprotkb/Q92692" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15741237", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 9 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Crystal structure of the V domain of human Nectin-like molecule-1/Syncam3/Tsll1/Igsf4b, a neural tissue-specific immunoglobulin-like cell-cell adhesion molecule.", "journal": "The Journal of biological chemistry", "date": "2006", "authors": "Dong X, Xu F, Gong Y, Gao J, Lin P, Chen T, Peng Y, Qiang B, Yuan J, Peng X, Rao Z", "reference": { "type": "PubMed", "id": "16467305", "url": "https://pubmed.ncbi.nlm.nih.gov/16467305" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q92692-1", "protein_name": "Nectin-2", "gene_name": "NECTIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQS3-1", "protein_name": "Nectin-3", "gene_name": "NECTIN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55286-1", "protein_name": "Cadherin-8", "gene_name": "CDH8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55289-1", "protein_name": "Cadherin-12", "gene_name": "CDH12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13634-1", "protein_name": "Cadherin-18", "gene_name": "CDH18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12864-1", "protein_name": "Cadherin-17", "gene_name": "CDH17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULB4-1", "protein_name": "Cadherin-9", "gene_name": "CDH9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22223-1", "protein_name": "Cadherin-3", "gene_name": "CDH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55283-1", "protein_name": "Cadherin-4", "gene_name": "CDH4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6N8-1", "protein_name": "Cadherin-10", "gene_name": "CDH10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55291-1", "protein_name": "Cadherin-15", "gene_name": "CDH15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86UP0-1", "protein_name": "Cadherin-24", "gene_name": "CDH24", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55290-1", "protein_name": "Cadherin-13", "gene_name": "CDH13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35222-1", "protein_name": "Catenin beta-1", "gene_name": "CTNNB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63261-1", "protein_name": "Actin, cytoplasmic 2", "gene_name": "ACTG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35221-1", "protein_name": "Catenin alpha-1", "gene_name": "CTNNA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14923-1", "protein_name": "Junction plakoglobin", "gene_name": "JUP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P03950-1", "protein_name": "Angiogenin", "gene_name": "ANG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60716-1", "protein_name": "Catenin delta-1", "gene_name": "CTNND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33151-1", "protein_name": "Cadherin-5", "gene_name": "CDH5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N126-1", "protein_name": "Cell adhesion molecule 3", "gene_name": "CADM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY67-1", "protein_name": "Cell adhesion molecule 1", "gene_name": "CADM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55287-1", "protein_name": "Cadherin-11", "gene_name": "CDH11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12830-1", "protein_name": "Cadherin-1", "gene_name": "CDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19022-1", "protein_name": "Cadherin-2", "gene_name": "CDH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULB5-1", "protein_name": "Cadherin-7", "gene_name": "CDH7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55285-1", "protein_name": "Cadherin-6", "gene_name": "CDH6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N3J6-1", "protein_name": "Cell adhesion molecule 2", "gene_name": "CADM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NY8-1", "protein_name": "Nectin-4", "gene_name": "NECTIN4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15223-1", "protein_name": "Nectin-1", "gene_name": "NECTIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q92692", "url": "https://www.uniprot.org/uniprotkb/Q92692" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16467305", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 31 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The adhesion molecule Necl-3/SynCAM-2 localizes to myelinated axons, binds to oligodendrocytes and promotes cell adhesion.", "journal": "BMC neuroscience", "date": "2007", "authors": "Pellissier F, Gerber A, Bauer C, Ballivet M, Ossipow V", 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"title": "The SNP rs6859 in NECTIN2 gene is associated with underlying heterogeneous trajectories of cognitive changes in older adults.", "journal": "BMC neurology", "date": "2024-02-27", "authors": "Rajendrakumar Aravind Lathika, Arbeev Konstantin G, Bagley Olivia, Yashin Anatoliy I, Ukraintseva Svetlana,", "reference": { "type": "PubMed", "id": "38408961", "url": "https://pubmed.ncbi.nlm.nih.gov/38408961" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q92692-1", "protein_name": "Nectin-2", "gene_name": "NECTIN2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q92692", "url": "https://www.uniprot.org/uniprotkb/Q92692" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.38408961", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ 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}, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"evidence": [ { "database": "UniProtKB", "id": "Q92692", "url": "https://www.uniprot.org/uniprotkb/Q92692" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.38588410", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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"Exercise-induced \u03b22-adrenergic receptor activation enhances the anti-leukemic activity of expanded \u03b3\u03b4 T-Cells via DNAM-1 upregulation and PVR/Nectin-2 recognition.", "journal": "Cancer research communications", "date": "2024-04-09", "authors": "Baker Forrest L, Smith Kyle A, Mylabathula Preetesh L, Zuniga Tiffany M, Diak Douglass M, Batatinha Helena, Niemiro Grace M, Seckeler Michael D, Pedlar Charles R, O'Connor Daniel P, Colombo Jamie N, Katsanis Emmanuel, Simpson Richard J", "reference": { "type": "PubMed", "id": "38592213", "url": "https://pubmed.ncbi.nlm.nih.gov/38592213" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q92692-1", "protein_name": "Nectin-2", "gene_name": "NECTIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15762-1", "protein_name": "CD226 antigen", "gene_name": "CD226", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15151-1", "protein_name": "Poliovirus receptor", "gene_name": "PVR", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q92692", "url": "https://www.uniprot.org/uniprotkb/Q92692" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.38592213", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structural basis for the immune recognition and selectivity of the immune receptor PVRIG for ligand Nectin-2.", "journal": "Structure (London, England : 1993)", "date": "2024-07-11", "authors": "Hu Songtao, Han Pu, Wang Meiyu, Cao Xiaoqing, Liu Hao, Zhang Shuailong, Zhang Shuijun, Liu Jun, Han Yi, Xiao Jinhe, Chen Qiang, Miao Kai, Qi Jianxun, Tan Shuguang, Gao George Fu, Wang Han", "reference": { "type": "PubMed", "id": "38626767", "url": "https://pubmed.ncbi.nlm.nih.gov/38626767" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q92692-1", "protein_name": "Nectin-2", "gene_name": "NECTIN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6DKI7-1", "protein_name": "Transmembrane protein PVRIG", "gene_name": "PVRIG", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q92692", "url": "https://www.uniprot.org/uniprotkb/Q92692" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.38626767", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], 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poliovirus receptor gene (PVR), is the true homolog of the murine MPH gene.", "journal": "Gene", "date": "1995", "authors": "Eberle F, Dubreuil P, Mattei MG, Devilard E, Lopez M", "reference": { "type": "PubMed", "id": "7622062", "url": "https://pubmed.ncbi.nlm.nih.gov/7622062" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q92692-1", "protein_name": "Nectin-2", "gene_name": "NECTIN2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q92692", "url": "https://www.uniprot.org/uniprotkb/Q92692" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7622062", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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"uniprot_canonical_ac": "Q8N3J6-1", "protein_name": "Cell adhesion molecule 2", "gene_name": "CADM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NY8-1", "protein_name": "Nectin-4", "gene_name": "NECTIN4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15223-1", "protein_name": "Nectin-1", "gene_name": "NECTIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q92692", "url": "https://www.uniprot.org/uniprotkb/Q92692" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7806582", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 31 } ], "sort_fields": 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"uniprot_canonical_ac": "O60716-1", "protein_name": "Catenin delta-1", "gene_name": "CTNND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33151-1", "protein_name": "Cadherin-5", "gene_name": "CDH5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N126-1", "protein_name": "Cell adhesion molecule 3", "gene_name": "CADM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY67-1", "protein_name": "Cell adhesion molecule 1", "gene_name": "CADM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55287-1", "protein_name": "Cadherin-11", "gene_name": "CDH11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12830-1", "protein_name": "Cadherin-1", "gene_name": "CDH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19022-1", "protein_name": "Cadherin-2", "gene_name": "CDH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULB5-1", "protein_name": "Cadherin-7", "gene_name": "CDH7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55285-1", "protein_name": "Cadherin-6", "gene_name": "CDH6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N3J6-1", "protein_name": "Cell adhesion molecule 2", "gene_name": "CADM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96NY8-1", "protein_name": "Nectin-4", "gene_name": "NECTIN4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15223-1", "protein_name": "Nectin-1", "gene_name": "NECTIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q92692", "url": "https://www.uniprot.org/uniprotkb/Q92692" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9219219", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { 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"Lanthionine synthetase components C-like 2 increases cellular sensitivity to adriamycin by decreasing the expression of P-glycoprotein through a transcription-mediated mechanism.", "journal": "Cancer Res.", "date": "2003", "authors": "Park S, James CD", "reference": { "type": "PubMed", "id": "12566319", "url": "https://pubmed.ncbi.nlm.nih.gov/12566319" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NS86-1", "protein_name": "LanC-like protein 2", "gene_name": "LANCL2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NS86", "url": "https://www.uniprot.org/uniprotkb/Q9NS86" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12566319", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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Genet.", "date": "1999", "authors": "Waragai M, Lammers CH, Takeuchi S, Imafuku I, Udagawa Y, Kanazawa I, Kawabata M, Mouradian MM, Okazawa H", "reference": { "type": "PubMed", "id": "10332029", "url": "https://pubmed.ncbi.nlm.nih.gov/10332029" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P42858-1", "protein_name": "Huntingtin", "gene_name": "HTT", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60828-1", "protein_name": "Polyglutamine-binding protein 1", "gene_name": "PQBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20265-1", "protein_name": "POU domain, class 3, transcription factor 2", "gene_name": "POU3F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q91VJ5-1", "protein_name": "Polyglutamine-binding protein 1", "gene_name": "Pqbp1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P10275-1", "protein_name": "Androgen receptor", "gene_name": "AR", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "A novel neurodevelopmental disorder associated with compound heterozygous variants in the huntingtin gene.", "journal": "European journal of human genetics : EJHG", "date": "2016", "authors": "Rodan LH, Cohen J, Fatemi A, Gillis T, Lucente D, Gusella J, Picker JD", "reference": { "type": "PubMed", "id": "27329733", "url": "https://pubmed.ncbi.nlm.nih.gov/27329733" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P42858-1", "protein_name": "Huntingtin", "gene_name": "HTT", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P42858", "url": "https://www.uniprot.org/uniprotkb/P42858" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.27329733", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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RDM, Bleeker MCG, Verhoeve HR, van Baal WM, van Trommel N, Kenter GG, Meijer CJLM, Berkhof J", "reference": { "type": "PubMed", "id": "35512257", "url": "https://pubmed.ncbi.nlm.nih.gov/35512257" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96LR4-1", "protein_name": "Chemokine-like protein TAFA-4", "gene_name": "TAFA4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96LR4", "url": "https://www.uniprot.org/uniprotkb/Q96LR4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.35512257", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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J. Med. Genet.", "date": "2013", "authors": "M\u00e9garban\u00e9 Andr\u00e9, Pangrazio Alessandra, Villa Anna, Chouery Eliane, Maarawi Joseph, Sabbagh Sandra, Lefranc G\u00e9rard, Sobacchi Cristina", "reference": { "type": "PubMed", "id": "23123320", "url": "https://pubmed.ncbi.nlm.nih.gov/23123320" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y5X0-1", "protein_name": "Sorting nexin-10", "gene_name": "SNX10", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y5X0", "url": "https://www.uniprot.org/uniprotkb/Q9Y5X0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.23123320", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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Biokhimiia", "date": "2021", "authors": "Xiao B, Liu N, Hou L, Jiang M, Yao D", "reference": { "type": "PubMed", "id": "34906048", "url": "https://pubmed.ncbi.nlm.nih.gov/34906048" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y5X0-1", "protein_name": "Sorting nexin-10", "gene_name": "SNX10", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y5X0", "url": "https://www.uniprot.org/uniprotkb/Q9Y5X0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.34906048", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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"field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "SNX10 promoted liver IR injury by facilitating macrophage M1 polarization via NLRP3 inflammasome activation.", "journal": "Molecular immunology", "date": "2024-02", "authors": "Wu Dongming, Wang Yong, Xu Jian, Wang Dong, Zhang Jiawei, Meng Lijuan, Hu Yuanchang, Wang Ping, Lin Jinde, Zhou Shun", "reference": { "type": "PubMed", "id": "38271879", "url": 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