[ { "title": "Structural and thermodynamic characterization of the interaction of the SH3 domain from Fyn with the proline-rich binding site on the p85 subunit of PI3-kinase.", "journal": "Biochemistry", "date": "1996", "authors": "Renzoni D A, Pugh D J, Siligardi G, Das P, Morton C J, Rossi C, Waterfield M D, Campbell I D, Ladbury J E", "reference": { "type": "PubMed", "id": "8961927", "url": "https://pubmed.ncbi.nlm.nih.gov/8961927" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P27986-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit alpha", "gene_name": "PIK3R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06241-1", "protein_name": "Tyrosine-protein kinase Fyn", "gene_name": "FYN", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P27986", "url": "https://www.uniprot.org/uniprotkb/P27986" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8961927", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Crystal structure of the breakpoint cluster region-homology domain from phosphoinositide 3-kinase p85 alpha subunit.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "1996", "authors": "Musacchio A, Cantley L C, Harrison S C", "reference": { "type": "PubMed", "id": "8962058", "url": "https://pubmed.ncbi.nlm.nih.gov/8962058" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P27986-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit alpha", "gene_name": "PIK3R1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P27986", "url": "https://www.uniprot.org/uniprotkb/P27986" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8962058", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of a common amino acid polymorphism in the p85alpha regulatory subunit of phosphatidylinositol 3-kinase: effects on glucose disappearance constant, glucose effectiveness, and the insulin sensitivity index.", "journal": "Diabetes", "date": "1997", "authors": "Hansen T, Andersen CB, Echwald SM, Urhammer SA, Clausen JO, Vestergaard H, Owens D, Hansen L, Pedersen O", "reference": { "type": "PubMed", "id": "9032108", "url": "https://pubmed.ncbi.nlm.nih.gov/9032108" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P27986-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit alpha", "gene_name": "PIK3R1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P27986", "url": "https://www.uniprot.org/uniprotkb/P27986" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9032108", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Modification of phosphatidylinositol 3-kinase SH2 domain binding properties by Abl- or Lck-mediated tyrosine phosphorylation at Tyr-688.", "journal": "The Journal of biological chemistry", "date": "1998", "authors": "von Willebrand M, Williams S, Saxena M, Gilman J, Tailor P, Jascur T, Amarante-Mendes GP, Green DR, Mustelin T", "reference": { "type": "PubMed", "id": "9461588", "url": "https://pubmed.ncbi.nlm.nih.gov/9461588" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P27986-1", "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit alpha", "gene_name": "PIK3R1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P27986", "url": "https://www.uniprot.org/uniprotkb/P27986" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 688, "end_pos": 688, "kinase_uniprot_canonical_ac": "P06239-1", "kinase_gene_name": "LCK", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "P27986", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P27986" }, { "database": "PubMed", "id": "9461588", "url": "https://pubmed.ncbi.nlm.nih.gov/9461588" } ], "site_lbl": "Tyr688", "uniprot_canonical_ac": "P27986-1" } ], "record_id": "pubmed.9461588", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Domain-specific mutations in TGFB1 result in Camurati-Engelmann disease.", "journal": "Nature genetics", "date": "2000", "authors": "Kinoshita A, Saito T, Tomita H, Makita Y, Yoshida K, Ghadami M, Yamada K, Kondo S, Ikegawa S, Nishimura G, Fukushima Y, Nakagomi T, Saito H, Sugimoto T, Kamegaya M, Hisa K, Murray JC, Taniguchi N, Niikawa N, Yoshiura K", "reference": { "type": "PubMed", "id": "10973241", "url": "https://pubmed.ncbi.nlm.nih.gov/10973241" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01137-1", "protein_name": "Transforming growth factor beta-1 proprotein", "gene_name": "TGFB1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01137", "url": "https://www.uniprot.org/uniprotkb/P01137" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10973241", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mutations in the gene encoding the latency-associated peptide of TGF-beta 1 cause Camurati-Engelmann disease.", "journal": "Nature genetics", "date": "2000", "authors": "Janssens K, Gershoni-Baruch R, Guanabens N, Migone N, Ralston S, Bonduelle M, Lissens W, Van Maldergem L, Vanhoenacker F, Verbruggen L, Van Hul W", "reference": { "type": "PubMed", "id": "11062463", "url": "https://pubmed.ncbi.nlm.nih.gov/11062463" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01137-1", "protein_name": "Transforming growth factor beta-1 proprotein", "gene_name": "TGFB1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01137", "url": "https://www.uniprot.org/uniprotkb/P01137" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11062463", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Differential gene expression of cultured human osteoblasts.", "journal": "J. Cell. Biochem.", "date": "2001", "authors": "Shur I, Lokiec F, Bleiberg I, Benayahu D", "reference": { "type": "PubMed", "id": "11746498", "url": "https://pubmed.ncbi.nlm.nih.gov/11746498" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01137-1", "protein_name": "Transforming growth factor beta-1 proprotein", "gene_name": "TGFB1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01137", "url": "https://www.uniprot.org/uniprotkb/P01137" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11746498", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Transforming growth factor-beta 1 mutations in Camurati-Engelmann disease lead to increased signaling by altering either activation or secretion of the mutant protein.", "journal": "The Journal of biological chemistry", "date": "2003", "authors": "Janssens K, ten Dijke P, Ralston SH, Bergmann C, Van Hul W", "reference": { "type": "PubMed", "id": "12493741", "url": "https://pubmed.ncbi.nlm.nih.gov/12493741" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01137-1", "protein_name": "Transforming growth factor beta-1 proprotein", "gene_name": "TGFB1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01137", "url": "https://www.uniprot.org/uniprotkb/P01137" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12493741", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A mutation affecting the latency-associated peptide of TGFbeta1 in Camurati-Engelmann disease enhances osteoclast formation in vitro.", "journal": "The Journal of clinical endocrinology and metabolism", "date": "2003", "authors": "McGowan NW, MacPherson H, Janssens K, Van Hul W, Frith JC, Fraser WD, Ralston SH, Helfrich MH", "reference": { "type": "PubMed", "id": "12843182", "url": "https://pubmed.ncbi.nlm.nih.gov/12843182" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01137-1", "protein_name": "Transforming growth factor beta-1 proprotein", "gene_name": "TGFB1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01137", "url": "https://www.uniprot.org/uniprotkb/P01137" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12843182", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Site-directed mutagenesis of glycosylation sites in the transforming growth factor-beta 1 (TGF beta 1) and TGF beta 2 (414) precursors and of cysteine residues within mature TGF beta 1: effects on secretion and bioactivity.", "journal": "Molecular endocrinology (Baltimore, Md.)", "date": "1992-10", "authors": "Brunner A M, Lioubin M N, Marquardt H, Malacko A R, Wang W C, Shapiro R A, Neubauer M, Cook J, Madisen L, Purchio A F", "reference": { "type": "PubMed", "id": "1448117", "url": "https://pubmed.ncbi.nlm.nih.gov/1448117" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01137-1", "protein_name": "Transforming growth factor beta-1 proprotein", "gene_name": "TGFB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61812-1", "protein_name": "Transforming growth factor beta-2 proprotein", "gene_name": "TGFB2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01137", "url": "https://www.uniprot.org/uniprotkb/P01137" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true, "automatic_literature_mining": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": { "label": "iCn3D", "url": "https://www.ncbi.nlm.nih.gov/Structure/icn3d/?bcifid=7Y1T&bu=0&command=select+.D:107;+center+selection;+zoom+selection" }, "start_pos": 136, "start_aa": "Asn", "end_pos": 136, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn136", "evidence": [ { "id": "P01137", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P01137#ptm_processing" }, { "id": "23090970", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/23090970" }, { "id": "GLY_000143", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000143" }, { "id": "24190977", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/24190977" }, { "id": "1448117", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/1448117" }, { "id": "GLY_000481", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000481" }, { "id": "7Y1T", "database": "PDB", "url": "https://www.rcsb.org/structure/7Y1T" }, { "id": "8UDZ", "database": "PDB", "url": "https://www.rcsb.org/structure/8UDZ" } ], "mining_tool": "GlycoSiteMiner_1.0", "mining_tool_list": [ { "label": "GlycoSiteMiner_1.0" } ], "filter_code": "001000000000000000000.00010000000000.00.01001", "uniprot_canonical_ac": "P01137-1" }, { "glytoucan_ac": "", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true, "automatic_literature_mining": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": { "label": "iCn3D", "url": "https://www.ncbi.nlm.nih.gov/Structure/icn3d/?bcifid=7Y1R&bu=0&command=select+.B:53;+center+selection;+zoom+selection" }, "start_pos": 82, "start_aa": "Asn", "end_pos": 82, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn82", "evidence": [ { "id": "P01137", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P01137#ptm_processing" }, { "id": "16335952", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/16335952" }, { "id": "5FFO", "database": "PDB", "url": "https://www.rcsb.org/sequence/5FFO" }, { "id": "28117447", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/28117447" }, { "id": "16263699", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/16263699" }, { "id": "24190977", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/24190977" }, { "id": "GLY_000143", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000143" }, { "id": "1448117", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/1448117" }, { "id": "GLY_000481", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000481" }, { "id": "7Y1R", "database": "PDB", "url": "https://www.rcsb.org/structure/7Y1R" }, { "id": "8REW", "database": "PDB", "url": "https://www.rcsb.org/structure/8REW" }, { "id": "8UDZ", "database": "PDB", "url": "https://www.rcsb.org/structure/8UDZ" } ], "mining_tool": "GlycoSiteMiner_1.0", "mining_tool_list": [ { "label": "GlycoSiteMiner_1.0" } ], "filter_code": "001000000000000000000.00010000000000.00.01001", "uniprot_canonical_ac": "P01137-1" }, { "glytoucan_ac": "", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true, "automatic_literature_mining": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 241, "start_aa": "Asn", "end_pos": 241, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn241", "evidence": [ { "id": "P61812", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P61812#ptm_processing" }, { "id": "1448117", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/1448117" }, { "id": "GLY_000481", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000481" } ], "mining_tool": "GlycoSiteMiner_1.0", "mining_tool_list": [ { "label": "GlycoSiteMiner_1.0" } ], "filter_code": "001000000000000000000.00010000000000.00.01000", "uniprot_canonical_ac": "P61812-1" }, { "glytoucan_ac": "", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true, "automatic_literature_mining": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": { "label": "iCn3D", "url": "https://www.ncbi.nlm.nih.gov/Structure/icn3d/?bcifid=8FXS&bu=0&command=select+.B:72;+center+selection;+zoom+selection" }, "start_pos": 72, "start_aa": "Asn", "end_pos": 72, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn72", "evidence": [ { "id": "P61812", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/P61812#ptm_processing" }, { "id": "24190977", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/24190977" }, { "id": "GLY_000143", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000143" }, { "id": "23090970", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/23090970" }, { "id": "1448117", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/1448117" }, { "id": "GLY_000481", "database": "GlyGen", "url": "https://data.glygen.org/GLY_000481" }, { "id": "8FXS", "database": "PDB", "url": "https://www.rcsb.org/structure/8FXS" }, { "id": "8FXV", "database": "PDB", "url": "https://www.rcsb.org/structure/8FXV" } ], "mining_tool": "GlycoSiteMiner_1.0", "mining_tool_list": [ { "label": "GlycoSiteMiner_1.0" } ], "filter_code": "001000000000000000000.00010000000000.00.01000", "uniprot_canonical_ac": "P61812-1" } ], "record_id": "pubmed.1448117", "abstract": "", "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 4 }, { "field": "total_sites", "count": 4 }, { "field": "n_linked_sites", "count": 4 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 4 }, { "field": "exact_n_linked_sites", "count": 4 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "icn3d_view.label", "icn3d_view.url", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl", "mining_tool", "filter_code", "uniprot_canonical_ac" ] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 4 }, { "field": "total_sites", "count": 4 }, { "field": "n_linked_sites", "count": 4 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 4 }, { "field": "exact_n_linked_sites", "count": 4 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "icn3d_view.label", "icn3d_view.url", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl", "mining_tool", "filter_code", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 4 }, { "field": "total_sites", "count": 4 }, { "field": "n_linked_sites", "count": 4 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 4 }, { "field": "exact_n_linked_sites", "count": 4 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "icn3d_view.label", "icn3d_view.url", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl", "mining_tool", "filter_code", "uniprot_canonical_ac" ] } ] }, { "title": "TGFB1 mutations in four new families with Camurati-Engelmann disease: confirmation of independently arising LAP-domain-specific mutations.", "journal": "American journal of medical genetics. Part A", "date": "2004", "authors": "Kinoshita A, Fukumaki Y, Shirahama S, Miyahara A, Nishimura G, Haga N, Namba A, Ueda H, Hayashi H, Ikegawa S, Seidel J, Niikawa N, Yoshiura KI", "reference": { "type": "PubMed", "id": "15103729", "url": "https://pubmed.ncbi.nlm.nih.gov/15103729" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01137-1", "protein_name": "Transforming growth factor beta-1 proprotein", "gene_name": "TGFB1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01137", "url": "https://www.uniprot.org/uniprotkb/P01137" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15103729", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A transforming growth factor-beta receptor-interacting protein frequently mutated in human ovarian cancer.", "journal": "Cancer research", "date": "2005", "authors": "Ding W, Tang Q, Espina V, Liotta LA, Mauger DT, Mulder KM", "reference": { "type": "PubMed", "id": "16061631", "url": "https://pubmed.ncbi.nlm.nih.gov/16061631" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01137-1", "protein_name": "Transforming growth factor beta-1 proprotein", "gene_name": "TGFB1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01137", "url": "https://www.uniprot.org/uniprotkb/P01137" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16061631", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Role for carbohydrate structures in TGF-beta 1 latency.", "journal": "Nature", "date": "1989", "authors": "Miyazono K, Heldin CH", "reference": { "type": "PubMed", "id": "2493139", "url": "https://pubmed.ncbi.nlm.nih.gov/2493139" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01137-1", "protein_name": "Transforming growth factor beta-1 proprotein", "gene_name": "TGFB1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01137", "url": "https://www.uniprot.org/uniprotkb/P01137" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.2493139", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structures of a pan-specific antagonist antibody complexed to different isoforms of TGFbeta reveal structural plasticity of antibody-antigen interactions.", "journal": "Protein science : a publication of the Protein Society", "date": "2014", "authors": "Moulin A, Mathieu M, Lawrence C, Bigelow R, Levine M, Hamel C, Marquette JP, Le Parc J, Loux C, Ferrari P, Capdevila C, Dumas J, Dumas B, Rak A, Bird J, Qiu H, Pan CQ, Edmunds T, Wei RR", "reference": { "type": "PubMed", "id": "25209176", "url": "https://pubmed.ncbi.nlm.nih.gov/25209176" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01137-1", "protein_name": "Transforming growth factor beta-1 proprotein", "gene_name": "TGFB1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01137", "url": "https://www.uniprot.org/uniprotkb/P01137" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.25209176", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Regulation of the Bioavailability of TGF-\u03b2 and TGF-\u03b2-Related Proteins.", "journal": "Cold Spring Harbor perspectives in biology", "date": "2016-06-01", "authors": "Robertson Ian B, Rifkin Daniel B", "reference": { "type": "PubMed", "id": "27252363", "url": "https://pubmed.ncbi.nlm.nih.gov/27252363" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01137-1", "protein_name": "Transforming growth factor beta-1 proprotein", "gene_name": "TGFB1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01137", "url": "https://www.uniprot.org/uniprotkb/P01137" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.27252363", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Human TGF-beta1 deficiency causes severe inflammatory bowel disease and encephalopathy.", "journal": "Nature genetics", "date": "2018", "authors": "Kotlarz D, Marquardt B, Baroy T, Lee WS, Konnikova L, Hollizeck S, Magg T, Lehle AS, Walz C, Borggraefe I, Hauck F, Bufler P, Conca R, Wall SM, Schumacher EM, Misceo D, Frengen E, Bentsen BS, Uhlig HH, Hopfner KP, Muise AM, Snapper SB, Stromme P, Klein C", "reference": { "type": "PubMed", "id": "29483653", "url": "https://pubmed.ncbi.nlm.nih.gov/29483653" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01137-1", "protein_name": "Transforming growth factor beta-1 proprotein", "gene_name": "TGFB1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01137", "url": "https://www.uniprot.org/uniprotkb/P01137" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.29483653", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cellular receptors for type beta transforming growth factor. Ligand binding and affinity labeling in human and rodent cell lines.", "journal": "J. Biol. Chem.", "date": "1985", "authors": "Massagu\u00e9 J, Like B", "reference": { "type": "PubMed", "id": "2982829", "url": "https://pubmed.ncbi.nlm.nih.gov/2982829" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01137-1", "protein_name": "Transforming growth factor beta-1 proprotein", "gene_name": "TGFB1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01137", "url": "https://www.uniprot.org/uniprotkb/P01137" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.2982829", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Latent high molecular weight complex of transforming growth factor beta 1. Purification from human platelets and structural characterization.", "journal": "The Journal of biological chemistry", "date": "1988", "authors": "Miyazono K, Hellman U, Wernstedt C, Heldin CH", "reference": { "type": "PubMed", "id": "3162913", "url": "https://pubmed.ncbi.nlm.nih.gov/3162913" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01137-1", "protein_name": "Transforming growth factor beta-1 proprotein", "gene_name": "TGFB1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01137", "url": "https://www.uniprot.org/uniprotkb/P01137" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.3162913", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Intron-exon structure of the human transforming growth factor-beta precursor gene.", "journal": "Nucleic Acids Res.", "date": "1987", "authors": "Derynck R, Rhee L, Chen E Y, Van Tilburg A", "reference": { "type": "PubMed", "id": "3470709", "url": "https://pubmed.ncbi.nlm.nih.gov/3470709" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01137-1", "protein_name": "Transforming growth factor beta-1 proprotein", "gene_name": "TGFB1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01137", "url": "https://www.uniprot.org/uniprotkb/P01137" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.3470709", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Human transforming growth factor-beta complementary DNA sequence and expression in normal and transformed cells.", "journal": "Nature", "date": "1985", "authors": "Derynck R, Jarrett JA, Chen EY, Eaton DH, Bell JR, Assoian RK, Roberts AB, Sporn MB, Goeddel DV", "reference": { "type": "PubMed", "id": "3861940", "url": "https://pubmed.ncbi.nlm.nih.gov/3861940" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01137-1", "protein_name": "Transforming growth factor beta-1 proprotein", "gene_name": "TGFB1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01137", "url": "https://www.uniprot.org/uniprotkb/P01137" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.3861940", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Synthetic peptide-generated monoclonal antibodies to transforming growth factor-beta 1.", "journal": "Hybridoma", "date": "1993-08", "authors": "Tahara N, Yasumitsu H, Umeda M", "reference": { "type": "PubMed", "id": "7503942", "url": "https://pubmed.ncbi.nlm.nih.gov/7503942" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01137-1", "protein_name": "Transforming growth factor beta-1 proprotein", "gene_name": "TGFB1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01137", "url": "https://www.uniprot.org/uniprotkb/P01137" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7503942", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Transforming growth factor beta 1: NMR signal assignments of the recombinant protein expressed and isotopically enriched using Chinese hamster ovary cells.", "journal": "Biochemistry", "date": "1993", "authors": "Archer S J, Bax A, Roberts A B, Sporn M B, Ogawa Y, Piez K A, Weatherbee J A, Tsang M L, Lucas R, Zheng B L", "reference": { "type": "PubMed", "id": "8424942", "url": "https://pubmed.ncbi.nlm.nih.gov/8424942" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01137-1", "protein_name": "Transforming growth factor beta-1 proprotein", "gene_name": "TGFB1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01137", "url": "https://www.uniprot.org/uniprotkb/P01137" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8424942", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Transforming growth factor beta 1: secondary structure as determined by heteronuclear magnetic resonance spectroscopy.", "journal": "Biochemistry", "date": "1993", "authors": "Archer S J, Bax A, Roberts A B, Sporn M B, Ogawa Y, Piez K A, Weatherbee J A, Tsang M L, Lucas R, Zheng B L", "reference": { "type": "PubMed", "id": "8424943", "url": "https://pubmed.ncbi.nlm.nih.gov/8424943" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01137-1", "protein_name": "Transforming growth factor beta-1 proprotein", "gene_name": "TGFB1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01137", "url": "https://www.uniprot.org/uniprotkb/P01137" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8424943", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Recombinant human transforming growth factor-beta 1: expression by Chinese hamster ovary cells, isolation, and characterization.", "journal": "Protein Expr. Purif.", "date": "1993", "authors": "Bourdrel L, Lin C H, Lauren S L, Elmore R H, Sugarman B J, Hu S, Westcott K R", "reference": { "type": "PubMed", "id": "8471846", "url": "https://pubmed.ncbi.nlm.nih.gov/8471846" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01137-1", "protein_name": "Transforming growth factor beta-1 proprotein", "gene_name": "TGFB1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01137", "url": "https://www.uniprot.org/uniprotkb/P01137" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8471846", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Transforming growth factor beta 1: three-dimensional structure in solution and comparison with the X-ray structure of transforming growth factor beta 2.", "journal": "Biochemistry", "date": "1996", "authors": "Hinck A P, Archer S J, Qian S W, Roberts A B, Sporn M B, Weatherbee J A, Tsang M L, Lucas R, Zhang B L, Wenker J, Torchia D A", "reference": { "type": "PubMed", "id": "8679613", "url": "https://pubmed.ncbi.nlm.nih.gov/8679613" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01137-1", "protein_name": "Transforming growth factor beta-1 proprotein", "gene_name": "TGFB1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01137", "url": "https://www.uniprot.org/uniprotkb/P01137" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8679613", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Latent transforming growth factor-beta: structural features and mechanisms of activation.", "journal": "Kidney Int.", "date": "1997", "authors": "Munger J S, Harpel J G, Gleizes P E, Mazzieri R, Nunes I, Rifkin D B", "reference": { "type": "PubMed", "id": "9150447", "url": "https://pubmed.ncbi.nlm.nih.gov/9150447" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01137-1", "protein_name": "Transforming growth factor beta-1 proprotein", "gene_name": "TGFB1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01137", "url": "https://www.uniprot.org/uniprotkb/P01137" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9150447", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Association of a polymorphism of the transforming growth factor-beta1 gene with genetic susceptibility to osteoporosis in postmenopausal Japanese women.", "journal": "Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research", "date": "1998", "authors": "Yamada Y, Miyauchi A, Goto J, Takagi Y, Okuizumi H, Kanematsu M, Hase M, Takai H, Harada A, Ikeda K", "reference": { "type": "PubMed", "id": "9783545", "url": "https://pubmed.ncbi.nlm.nih.gov/9783545" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01137-1", "protein_name": "Transforming growth factor beta-1 proprotein", "gene_name": "TGFB1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01137", "url": "https://www.uniprot.org/uniprotkb/P01137" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9783545", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Inhibition of CD3-linked phospholipase C by phorbol ester and by cAMP is associated with decreased phosphotyrosine and increased phosphoserine contents of PLC-gamma 1.", "journal": "The Journal of biological chemistry", "date": "1992", "authors": "Park DJ, Min HK, Rhee SG", "reference": { "type": "PubMed", "id": "1370476", "url": "https://pubmed.ncbi.nlm.nih.gov/1370476" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 1248, "end_pos": 1248, "kinase_uniprot_canonical_ac": "P17252-1", "kinase_gene_name": "PRKCA", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "1370476", "url": "https://pubmed.ncbi.nlm.nih.gov/1370476" } ], "site_lbl": "Ser1248", "uniprot_canonical_ac": "P19174-1" }, { "start_pos": 1248, "end_pos": 1248, "kinase_uniprot_canonical_ac": "P17612-1", "kinase_gene_name": "PRKACA", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "1370476", "url": "https://pubmed.ncbi.nlm.nih.gov/1370476" } ], "site_lbl": "Ser1248", "uniprot_canonical_ac": "P19174-1" }, { "start_pos": 1248, "end_pos": 1248, "kinase_uniprot_canonical_ac": "Q15139-1", "kinase_gene_name": "PRKD1", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "19651622", "url": "https://pubmed.ncbi.nlm.nih.gov/19651622" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "8885868", "url": "https://pubmed.ncbi.nlm.nih.gov/8885868" }, { "database": "PubMed", "id": "1370476", "url": "https://pubmed.ncbi.nlm.nih.gov/1370476" } ], "site_lbl": "Ser1248", "uniprot_canonical_ac": "P19174-1" }, { "start_pos": 1248, "end_pos": 1248, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "PubMed", "id": "1370476", "url": "https://pubmed.ncbi.nlm.nih.gov/1370476" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "28882164", "url": "https://pubmed.ncbi.nlm.nih.gov/28882164" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" } ], "site_lbl": "Ser1248", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.1370476", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 4 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Role of the pleckstrin homology domain of PLCgamma1 in its interaction with the insulin receptor.", "journal": "The Journal of cell biology", "date": "2003", "authors": "Kwon YK, Jang HJ, Kole S, He HJ, Bernier M", "reference": { "type": "PubMed", "id": "14568990", "url": "https://pubmed.ncbi.nlm.nih.gov/14568990" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 783, "end_pos": 783, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by ITK, SYK and TXK", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16497976", "url": "https://pubmed.ncbi.nlm.nih.gov/16497976" }, { "database": "PubMed", "id": "1689310", "url": "https://pubmed.ncbi.nlm.nih.gov/1689310" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "7682059", "url": "https://pubmed.ncbi.nlm.nih.gov/7682059" }, { "database": "PubMed", "id": "8657103", "url": "https://pubmed.ncbi.nlm.nih.gov/8657103" }, { "database": "PubMed", "id": "8885868", "url": "https://pubmed.ncbi.nlm.nih.gov/8885868" }, { "database": "PRO", "id": "P19174", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P19174" }, { "database": "PubMed", "id": "14568990", "url": "https://pubmed.ncbi.nlm.nih.gov/14568990" }, { "database": "PubMed", "id": "15623534", "url": "https://pubmed.ncbi.nlm.nih.gov/15623534" }, { "database": "PubMed", "id": "15764700", "url": "https://pubmed.ncbi.nlm.nih.gov/15764700" }, { "database": "PubMed", "id": "16038803", "url": "https://pubmed.ncbi.nlm.nih.gov/16038803" }, { "database": "PubMed", "id": "16081816", "url": "https://pubmed.ncbi.nlm.nih.gov/16081816" }, { "database": "PubMed", "id": "16467851", "url": "https://pubmed.ncbi.nlm.nih.gov/16467851" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "17116690", "url": "https://pubmed.ncbi.nlm.nih.gov/17116690" }, { "database": "PubMed", "id": "17148460", "url": "https://pubmed.ncbi.nlm.nih.gov/17148460" }, { "database": "PubMed", "id": "17220479", "url": "https://pubmed.ncbi.nlm.nih.gov/17220479" }, { "database": "PubMed", "id": "19179337", "url": "https://pubmed.ncbi.nlm.nih.gov/19179337" }, { "database": "PubMed", "id": "21760611", "url": "https://pubmed.ncbi.nlm.nih.gov/21760611" }, { "database": "PubMed", "id": "22649724", "url": "https://pubmed.ncbi.nlm.nih.gov/22649724" }, { "database": "PubMed", "id": "22665519", "url": "https://pubmed.ncbi.nlm.nih.gov/22665519" }, { "database": "PubMed", "id": "22745786", "url": "https://pubmed.ncbi.nlm.nih.gov/22745786" }, { "database": "PubMed", "id": "23028325", "url": "https://pubmed.ncbi.nlm.nih.gov/23028325" }, { "database": "PubMed", "id": "23063561", "url": "https://pubmed.ncbi.nlm.nih.gov/23063561" }, { "database": "PubMed", "id": "23613900", "url": "https://pubmed.ncbi.nlm.nih.gov/23613900" }, { "database": "PubMed", "id": "23629676", "url": "https://pubmed.ncbi.nlm.nih.gov/23629676" }, { "database": "PubMed", "id": "24066087", "url": "https://pubmed.ncbi.nlm.nih.gov/24066087" }, { "database": "PubMed", "id": "24205378", "url": "https://pubmed.ncbi.nlm.nih.gov/24205378" }, { "database": "PubMed", "id": "25140833", "url": "https://pubmed.ncbi.nlm.nih.gov/25140833" }, { "database": "PubMed", "id": "25252913", "url": "https://pubmed.ncbi.nlm.nih.gov/25252913" }, { "database": "PubMed", "id": "25717186", "url": "https://pubmed.ncbi.nlm.nih.gov/25717186" }, { "database": "PubMed", "id": "25734483", "url": "https://pubmed.ncbi.nlm.nih.gov/25734483" }, { "database": "PubMed", "id": "25870599", "url": "https://pubmed.ncbi.nlm.nih.gov/25870599" }, { "database": "PubMed", "id": "25916191", "url": "https://pubmed.ncbi.nlm.nih.gov/25916191" }, { "database": "PubMed", "id": "26295810", "url": "https://pubmed.ncbi.nlm.nih.gov/26295810" }, { "database": "PubMed", "id": "27764189", "url": "https://pubmed.ncbi.nlm.nih.gov/27764189" }, { "database": "PubMed", "id": "27995987", "url": "https://pubmed.ncbi.nlm.nih.gov/27995987" }, { "database": "PubMed", "id": "28798148", "url": "https://pubmed.ncbi.nlm.nih.gov/28798148" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" }, { "database": "PubMed", "id": "29066806", "url": "https://pubmed.ncbi.nlm.nih.gov/29066806" }, { "database": "PubMed", "id": "29743977", "url": "https://pubmed.ncbi.nlm.nih.gov/29743977" }, { "database": "PubMed", "id": "29972810", "url": "https://pubmed.ncbi.nlm.nih.gov/29972810" }, { "database": "PubMed", "id": "30873169", "url": "https://pubmed.ncbi.nlm.nih.gov/30873169" }, { "database": "PubMed", "id": "35367415", "url": "https://pubmed.ncbi.nlm.nih.gov/35367415" }, { "database": "PubMed", "id": "9716455", "url": "https://pubmed.ncbi.nlm.nih.gov/9716455" }, { "database": "PubMed", "id": "15215251", "url": "https://pubmed.ncbi.nlm.nih.gov/15215251" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "PubMed", "id": "11564877", "url": "https://pubmed.ncbi.nlm.nih.gov/11564877" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.14568990", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "T cell receptor-induced activation of phospholipase C-gamma1 depends on a sequence-independent function of the P-I region of SLP-76.", "journal": "The Journal of biological chemistry", "date": "2005", "authors": "Gonen R, Beach D, Ainey C, Yablonski D", "reference": { "type": "PubMed", "id": "15623534", "url": "https://pubmed.ncbi.nlm.nih.gov/15623534" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 783, "end_pos": 783, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by ITK, SYK and TXK", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16497976", "url": "https://pubmed.ncbi.nlm.nih.gov/16497976" }, { "database": "PubMed", "id": "1689310", "url": "https://pubmed.ncbi.nlm.nih.gov/1689310" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "7682059", "url": "https://pubmed.ncbi.nlm.nih.gov/7682059" }, { "database": "PubMed", "id": "8657103", "url": "https://pubmed.ncbi.nlm.nih.gov/8657103" }, { "database": "PubMed", "id": "8885868", "url": "https://pubmed.ncbi.nlm.nih.gov/8885868" }, { "database": "PRO", "id": "P19174", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P19174" }, { "database": "PubMed", "id": "14568990", "url": "https://pubmed.ncbi.nlm.nih.gov/14568990" }, { "database": "PubMed", "id": "15623534", "url": "https://pubmed.ncbi.nlm.nih.gov/15623534" }, { "database": "PubMed", "id": "15764700", "url": "https://pubmed.ncbi.nlm.nih.gov/15764700" }, { "database": "PubMed", "id": "16038803", "url": "https://pubmed.ncbi.nlm.nih.gov/16038803" }, { "database": "PubMed", "id": "16081816", "url": "https://pubmed.ncbi.nlm.nih.gov/16081816" }, { "database": "PubMed", "id": "16467851", "url": "https://pubmed.ncbi.nlm.nih.gov/16467851" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "17116690", "url": "https://pubmed.ncbi.nlm.nih.gov/17116690" }, { "database": "PubMed", "id": "17148460", "url": "https://pubmed.ncbi.nlm.nih.gov/17148460" }, { "database": "PubMed", "id": "17220479", "url": "https://pubmed.ncbi.nlm.nih.gov/17220479" }, { "database": "PubMed", "id": "19179337", "url": "https://pubmed.ncbi.nlm.nih.gov/19179337" }, { "database": "PubMed", "id": "21760611", "url": "https://pubmed.ncbi.nlm.nih.gov/21760611" }, { "database": "PubMed", "id": "22649724", "url": "https://pubmed.ncbi.nlm.nih.gov/22649724" }, { "database": "PubMed", "id": "22665519", "url": "https://pubmed.ncbi.nlm.nih.gov/22665519" }, { "database": "PubMed", "id": "22745786", "url": "https://pubmed.ncbi.nlm.nih.gov/22745786" }, { "database": "PubMed", "id": "23028325", "url": "https://pubmed.ncbi.nlm.nih.gov/23028325" }, { "database": "PubMed", "id": "23063561", "url": "https://pubmed.ncbi.nlm.nih.gov/23063561" }, { "database": "PubMed", "id": "23613900", "url": "https://pubmed.ncbi.nlm.nih.gov/23613900" }, { "database": "PubMed", "id": "23629676", "url": "https://pubmed.ncbi.nlm.nih.gov/23629676" }, { "database": "PubMed", "id": "24066087", "url": "https://pubmed.ncbi.nlm.nih.gov/24066087" }, { "database": "PubMed", "id": "24205378", "url": "https://pubmed.ncbi.nlm.nih.gov/24205378" }, { "database": "PubMed", "id": "25140833", "url": "https://pubmed.ncbi.nlm.nih.gov/25140833" }, { "database": "PubMed", "id": "25252913", "url": "https://pubmed.ncbi.nlm.nih.gov/25252913" }, { "database": "PubMed", "id": "25717186", "url": "https://pubmed.ncbi.nlm.nih.gov/25717186" }, { "database": "PubMed", "id": "25734483", "url": "https://pubmed.ncbi.nlm.nih.gov/25734483" }, { "database": "PubMed", "id": "25870599", "url": "https://pubmed.ncbi.nlm.nih.gov/25870599" }, { "database": "PubMed", "id": "25916191", "url": "https://pubmed.ncbi.nlm.nih.gov/25916191" }, { "database": "PubMed", "id": "26295810", "url": "https://pubmed.ncbi.nlm.nih.gov/26295810" }, { "database": "PubMed", "id": "27764189", "url": "https://pubmed.ncbi.nlm.nih.gov/27764189" }, { "database": "PubMed", "id": "27995987", "url": "https://pubmed.ncbi.nlm.nih.gov/27995987" }, { "database": "PubMed", "id": "28798148", "url": "https://pubmed.ncbi.nlm.nih.gov/28798148" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" }, { "database": "PubMed", "id": "29066806", "url": "https://pubmed.ncbi.nlm.nih.gov/29066806" }, { "database": "PubMed", "id": "29743977", "url": "https://pubmed.ncbi.nlm.nih.gov/29743977" }, { "database": "PubMed", "id": "29972810", "url": "https://pubmed.ncbi.nlm.nih.gov/29972810" }, { "database": "PubMed", "id": "30873169", "url": "https://pubmed.ncbi.nlm.nih.gov/30873169" }, { "database": "PubMed", "id": "35367415", "url": "https://pubmed.ncbi.nlm.nih.gov/35367415" }, { "database": "PubMed", "id": "9716455", "url": "https://pubmed.ncbi.nlm.nih.gov/9716455" }, { "database": "PubMed", "id": "15215251", "url": "https://pubmed.ncbi.nlm.nih.gov/15215251" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "PubMed", "id": "11564877", "url": "https://pubmed.ncbi.nlm.nih.gov/11564877" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.15623534", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The isoforms of phospholipase C-gamma are differentially used by distinct human NK activating receptors.", "journal": "Journal of immunology (Baltimore, Md. : 1950)", "date": "2005", "authors": "Upshaw JL, Schoon RA, Dick CJ, Billadeau DD, Leibson PJ", "reference": { "type": "PubMed", "id": "15972651", "url": "https://pubmed.ncbi.nlm.nih.gov/15972651" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15972651", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Grb2 negatively regulates epidermal growth factor-induced phospholipase C-gamma1 activity through the direct interaction with tyrosine-phosphorylated phospholipase C-gamma1.", "journal": "Cellular signalling", "date": "2005", "authors": "Choi JH, Hong WP, Yun S, Kim HS, Lee JR, Park JB, Bae YS, Ryu SH, Suh PG", "reference": { "type": "PubMed", "id": "16038803", "url": "https://pubmed.ncbi.nlm.nih.gov/16038803" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 783, "end_pos": 783, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by ITK, SYK and TXK", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16497976", "url": "https://pubmed.ncbi.nlm.nih.gov/16497976" }, { "database": "PubMed", "id": "1689310", "url": "https://pubmed.ncbi.nlm.nih.gov/1689310" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "7682059", "url": "https://pubmed.ncbi.nlm.nih.gov/7682059" }, { "database": "PubMed", "id": "8657103", "url": "https://pubmed.ncbi.nlm.nih.gov/8657103" }, { "database": "PubMed", "id": "8885868", "url": "https://pubmed.ncbi.nlm.nih.gov/8885868" }, { "database": "PRO", "id": "P19174", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P19174" }, { "database": "PubMed", "id": "14568990", "url": "https://pubmed.ncbi.nlm.nih.gov/14568990" }, { "database": "PubMed", "id": "15623534", "url": "https://pubmed.ncbi.nlm.nih.gov/15623534" }, { "database": "PubMed", "id": "15764700", "url": "https://pubmed.ncbi.nlm.nih.gov/15764700" }, { "database": "PubMed", "id": "16038803", "url": "https://pubmed.ncbi.nlm.nih.gov/16038803" }, { "database": "PubMed", "id": "16081816", "url": "https://pubmed.ncbi.nlm.nih.gov/16081816" }, { "database": "PubMed", "id": "16467851", "url": "https://pubmed.ncbi.nlm.nih.gov/16467851" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "17116690", "url": "https://pubmed.ncbi.nlm.nih.gov/17116690" }, { "database": "PubMed", "id": "17148460", "url": "https://pubmed.ncbi.nlm.nih.gov/17148460" }, { "database": "PubMed", "id": "17220479", "url": "https://pubmed.ncbi.nlm.nih.gov/17220479" }, { "database": "PubMed", "id": "19179337", "url": "https://pubmed.ncbi.nlm.nih.gov/19179337" }, { "database": "PubMed", "id": "21760611", "url": "https://pubmed.ncbi.nlm.nih.gov/21760611" }, { "database": "PubMed", "id": "22649724", "url": "https://pubmed.ncbi.nlm.nih.gov/22649724" }, { "database": "PubMed", "id": "22665519", "url": "https://pubmed.ncbi.nlm.nih.gov/22665519" }, { "database": "PubMed", "id": "22745786", "url": "https://pubmed.ncbi.nlm.nih.gov/22745786" }, { "database": "PubMed", "id": "23028325", "url": "https://pubmed.ncbi.nlm.nih.gov/23028325" }, { "database": "PubMed", "id": "23063561", "url": "https://pubmed.ncbi.nlm.nih.gov/23063561" }, { "database": "PubMed", "id": "23613900", "url": "https://pubmed.ncbi.nlm.nih.gov/23613900" }, { "database": "PubMed", "id": "23629676", "url": "https://pubmed.ncbi.nlm.nih.gov/23629676" }, { "database": "PubMed", "id": "24066087", "url": "https://pubmed.ncbi.nlm.nih.gov/24066087" }, { "database": "PubMed", "id": "24205378", "url": "https://pubmed.ncbi.nlm.nih.gov/24205378" }, { "database": "PubMed", "id": "25140833", "url": "https://pubmed.ncbi.nlm.nih.gov/25140833" }, { "database": "PubMed", "id": "25252913", "url": "https://pubmed.ncbi.nlm.nih.gov/25252913" }, { "database": "PubMed", "id": "25717186", "url": "https://pubmed.ncbi.nlm.nih.gov/25717186" }, { "database": "PubMed", "id": "25734483", "url": "https://pubmed.ncbi.nlm.nih.gov/25734483" }, { "database": "PubMed", "id": "25870599", "url": "https://pubmed.ncbi.nlm.nih.gov/25870599" }, { "database": "PubMed", "id": "25916191", "url": "https://pubmed.ncbi.nlm.nih.gov/25916191" }, { "database": "PubMed", "id": "26295810", "url": "https://pubmed.ncbi.nlm.nih.gov/26295810" }, { "database": "PubMed", "id": "27764189", "url": "https://pubmed.ncbi.nlm.nih.gov/27764189" }, { "database": "PubMed", "id": "27995987", "url": "https://pubmed.ncbi.nlm.nih.gov/27995987" }, { "database": "PubMed", "id": "28798148", "url": "https://pubmed.ncbi.nlm.nih.gov/28798148" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" }, { "database": "PubMed", "id": "29066806", "url": "https://pubmed.ncbi.nlm.nih.gov/29066806" }, { "database": "PubMed", "id": "29743977", "url": "https://pubmed.ncbi.nlm.nih.gov/29743977" }, { "database": "PubMed", "id": "29972810", "url": "https://pubmed.ncbi.nlm.nih.gov/29972810" }, { "database": "PubMed", "id": "30873169", "url": "https://pubmed.ncbi.nlm.nih.gov/30873169" }, { "database": "PubMed", "id": "35367415", "url": "https://pubmed.ncbi.nlm.nih.gov/35367415" }, { "database": "PubMed", "id": "9716455", "url": "https://pubmed.ncbi.nlm.nih.gov/9716455" }, { "database": "PubMed", "id": "15215251", "url": "https://pubmed.ncbi.nlm.nih.gov/15215251" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "PubMed", "id": "11564877", "url": "https://pubmed.ncbi.nlm.nih.gov/11564877" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.16038803", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Early phosphorylation kinetics of proteins involved in proximal TCR-mediated signaling pathways.", "journal": "Journal of immunology (Baltimore, Md. : 1950)", "date": "2005", "authors": "Houtman JC, Houghtling RA, Barda-Saad M, Toda Y, Samelson LE", "reference": { "type": "PubMed", "id": "16081816", "url": "https://pubmed.ncbi.nlm.nih.gov/16081816" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 783, "end_pos": 783, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by ITK, SYK and TXK", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16497976", "url": "https://pubmed.ncbi.nlm.nih.gov/16497976" }, { "database": "PubMed", "id": "1689310", "url": "https://pubmed.ncbi.nlm.nih.gov/1689310" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "7682059", "url": "https://pubmed.ncbi.nlm.nih.gov/7682059" }, { "database": "PubMed", "id": "8657103", "url": "https://pubmed.ncbi.nlm.nih.gov/8657103" }, { "database": "PubMed", "id": "8885868", "url": "https://pubmed.ncbi.nlm.nih.gov/8885868" }, { "database": "PRO", "id": "P19174", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P19174" }, { "database": "PubMed", "id": "14568990", "url": "https://pubmed.ncbi.nlm.nih.gov/14568990" }, { "database": "PubMed", "id": "15623534", "url": "https://pubmed.ncbi.nlm.nih.gov/15623534" }, { "database": "PubMed", "id": "15764700", "url": "https://pubmed.ncbi.nlm.nih.gov/15764700" }, { "database": "PubMed", "id": "16038803", "url": "https://pubmed.ncbi.nlm.nih.gov/16038803" }, { "database": "PubMed", "id": "16081816", "url": "https://pubmed.ncbi.nlm.nih.gov/16081816" }, { "database": "PubMed", "id": "16467851", "url": "https://pubmed.ncbi.nlm.nih.gov/16467851" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "17116690", "url": "https://pubmed.ncbi.nlm.nih.gov/17116690" }, { "database": "PubMed", "id": "17148460", "url": "https://pubmed.ncbi.nlm.nih.gov/17148460" }, { "database": "PubMed", "id": "17220479", "url": "https://pubmed.ncbi.nlm.nih.gov/17220479" }, { "database": "PubMed", "id": "19179337", "url": "https://pubmed.ncbi.nlm.nih.gov/19179337" }, { "database": "PubMed", "id": "21760611", "url": "https://pubmed.ncbi.nlm.nih.gov/21760611" }, { "database": "PubMed", "id": "22649724", "url": "https://pubmed.ncbi.nlm.nih.gov/22649724" }, { "database": "PubMed", "id": "22665519", "url": "https://pubmed.ncbi.nlm.nih.gov/22665519" }, { "database": "PubMed", "id": "22745786", "url": "https://pubmed.ncbi.nlm.nih.gov/22745786" }, { "database": "PubMed", "id": "23028325", "url": "https://pubmed.ncbi.nlm.nih.gov/23028325" }, { "database": "PubMed", "id": "23063561", "url": "https://pubmed.ncbi.nlm.nih.gov/23063561" }, { "database": "PubMed", "id": "23613900", "url": "https://pubmed.ncbi.nlm.nih.gov/23613900" }, { "database": "PubMed", "id": "23629676", "url": "https://pubmed.ncbi.nlm.nih.gov/23629676" }, { "database": "PubMed", "id": "24066087", "url": "https://pubmed.ncbi.nlm.nih.gov/24066087" }, { "database": "PubMed", "id": "24205378", "url": "https://pubmed.ncbi.nlm.nih.gov/24205378" }, { "database": "PubMed", "id": "25140833", "url": "https://pubmed.ncbi.nlm.nih.gov/25140833" }, { "database": "PubMed", "id": "25252913", "url": "https://pubmed.ncbi.nlm.nih.gov/25252913" }, { "database": "PubMed", "id": "25717186", "url": "https://pubmed.ncbi.nlm.nih.gov/25717186" }, { "database": "PubMed", "id": "25734483", "url": "https://pubmed.ncbi.nlm.nih.gov/25734483" }, { "database": "PubMed", "id": "25870599", "url": "https://pubmed.ncbi.nlm.nih.gov/25870599" }, { "database": "PubMed", "id": "25916191", "url": "https://pubmed.ncbi.nlm.nih.gov/25916191" }, { "database": "PubMed", "id": "26295810", "url": "https://pubmed.ncbi.nlm.nih.gov/26295810" }, { "database": "PubMed", "id": "27764189", "url": "https://pubmed.ncbi.nlm.nih.gov/27764189" }, { "database": "PubMed", "id": "27995987", "url": "https://pubmed.ncbi.nlm.nih.gov/27995987" }, { "database": "PubMed", "id": "28798148", "url": "https://pubmed.ncbi.nlm.nih.gov/28798148" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" }, { "database": "PubMed", "id": "29066806", "url": "https://pubmed.ncbi.nlm.nih.gov/29066806" }, { "database": "PubMed", "id": "29743977", "url": "https://pubmed.ncbi.nlm.nih.gov/29743977" }, { "database": "PubMed", "id": "29972810", "url": "https://pubmed.ncbi.nlm.nih.gov/29972810" }, { "database": "PubMed", "id": "30873169", "url": "https://pubmed.ncbi.nlm.nih.gov/30873169" }, { "database": "PubMed", "id": "35367415", "url": "https://pubmed.ncbi.nlm.nih.gov/35367415" }, { "database": "PubMed", "id": "9716455", "url": "https://pubmed.ncbi.nlm.nih.gov/9716455" }, { "database": "PubMed", "id": "15215251", "url": "https://pubmed.ncbi.nlm.nih.gov/15215251" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "PubMed", "id": "11564877", "url": "https://pubmed.ncbi.nlm.nih.gov/11564877" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.16081816", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Recruitment and activation of PLCgamma1 in T cells: a new insight into old domains.", "journal": "The EMBO journal", "date": "2006", "authors": "Braiman A, Barda-Saad M, Sommers CL, Samelson LE", "reference": { "type": "PubMed", "id": "16467851", "url": "https://pubmed.ncbi.nlm.nih.gov/16467851" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 783, "end_pos": 783, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by ITK, SYK and TXK", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16497976", "url": "https://pubmed.ncbi.nlm.nih.gov/16497976" }, { "database": "PubMed", "id": "1689310", "url": "https://pubmed.ncbi.nlm.nih.gov/1689310" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "7682059", "url": "https://pubmed.ncbi.nlm.nih.gov/7682059" }, { "database": "PubMed", "id": "8657103", "url": "https://pubmed.ncbi.nlm.nih.gov/8657103" }, { "database": "PubMed", "id": "8885868", "url": "https://pubmed.ncbi.nlm.nih.gov/8885868" }, { "database": "PRO", "id": "P19174", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P19174" }, { "database": "PubMed", "id": "14568990", "url": "https://pubmed.ncbi.nlm.nih.gov/14568990" }, { "database": "PubMed", "id": "15623534", "url": "https://pubmed.ncbi.nlm.nih.gov/15623534" }, { "database": "PubMed", "id": "15764700", "url": "https://pubmed.ncbi.nlm.nih.gov/15764700" }, { "database": "PubMed", "id": "16038803", "url": "https://pubmed.ncbi.nlm.nih.gov/16038803" }, { "database": "PubMed", "id": "16081816", "url": "https://pubmed.ncbi.nlm.nih.gov/16081816" }, { "database": "PubMed", "id": "16467851", "url": "https://pubmed.ncbi.nlm.nih.gov/16467851" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "17116690", "url": "https://pubmed.ncbi.nlm.nih.gov/17116690" }, { "database": "PubMed", "id": "17148460", "url": "https://pubmed.ncbi.nlm.nih.gov/17148460" }, { "database": "PubMed", "id": "17220479", "url": "https://pubmed.ncbi.nlm.nih.gov/17220479" }, { "database": "PubMed", "id": "19179337", "url": "https://pubmed.ncbi.nlm.nih.gov/19179337" }, { "database": "PubMed", "id": "21760611", "url": "https://pubmed.ncbi.nlm.nih.gov/21760611" }, { "database": "PubMed", "id": "22649724", "url": "https://pubmed.ncbi.nlm.nih.gov/22649724" }, { "database": "PubMed", "id": "22665519", "url": "https://pubmed.ncbi.nlm.nih.gov/22665519" }, { "database": "PubMed", "id": "22745786", "url": "https://pubmed.ncbi.nlm.nih.gov/22745786" }, { "database": "PubMed", "id": "23028325", "url": "https://pubmed.ncbi.nlm.nih.gov/23028325" }, { "database": "PubMed", "id": "23063561", "url": "https://pubmed.ncbi.nlm.nih.gov/23063561" }, { "database": "PubMed", "id": "23613900", "url": "https://pubmed.ncbi.nlm.nih.gov/23613900" }, { "database": "PubMed", "id": "23629676", "url": "https://pubmed.ncbi.nlm.nih.gov/23629676" }, { "database": "PubMed", "id": "24066087", "url": "https://pubmed.ncbi.nlm.nih.gov/24066087" }, { "database": "PubMed", "id": "24205378", "url": "https://pubmed.ncbi.nlm.nih.gov/24205378" }, { "database": "PubMed", "id": "25140833", "url": "https://pubmed.ncbi.nlm.nih.gov/25140833" }, { "database": "PubMed", "id": "25252913", "url": "https://pubmed.ncbi.nlm.nih.gov/25252913" }, { "database": "PubMed", "id": "25717186", "url": "https://pubmed.ncbi.nlm.nih.gov/25717186" }, { "database": "PubMed", "id": "25734483", "url": "https://pubmed.ncbi.nlm.nih.gov/25734483" }, { "database": "PubMed", "id": "25870599", "url": "https://pubmed.ncbi.nlm.nih.gov/25870599" }, { "database": "PubMed", "id": "25916191", "url": "https://pubmed.ncbi.nlm.nih.gov/25916191" }, { "database": "PubMed", "id": "26295810", "url": "https://pubmed.ncbi.nlm.nih.gov/26295810" }, { "database": "PubMed", "id": "27764189", "url": "https://pubmed.ncbi.nlm.nih.gov/27764189" }, { "database": "PubMed", "id": "27995987", "url": "https://pubmed.ncbi.nlm.nih.gov/27995987" }, { "database": "PubMed", "id": "28798148", "url": "https://pubmed.ncbi.nlm.nih.gov/28798148" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" }, { "database": "PubMed", "id": "29066806", "url": "https://pubmed.ncbi.nlm.nih.gov/29066806" }, { "database": "PubMed", "id": "29743977", "url": "https://pubmed.ncbi.nlm.nih.gov/29743977" }, { "database": "PubMed", "id": "29972810", "url": "https://pubmed.ncbi.nlm.nih.gov/29972810" }, { "database": "PubMed", "id": "30873169", "url": "https://pubmed.ncbi.nlm.nih.gov/30873169" }, { "database": "PubMed", "id": "35367415", "url": "https://pubmed.ncbi.nlm.nih.gov/35367415" }, { "database": "PubMed", "id": "9716455", "url": "https://pubmed.ncbi.nlm.nih.gov/9716455" }, { "database": "PubMed", "id": "15215251", "url": "https://pubmed.ncbi.nlm.nih.gov/15215251" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "PubMed", "id": "11564877", "url": "https://pubmed.ncbi.nlm.nih.gov/11564877" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.16467851", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Akt binds to and phosphorylates phospholipase C-gamma1 in response to epidermal growth factor.", "journal": "Molecular biology of the cell", "date": "2006", "authors": "Wang Y, Wu J, Wang Z", "reference": { "type": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 1248, "end_pos": 1248, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "PubMed", "id": "1370476", "url": "https://pubmed.ncbi.nlm.nih.gov/1370476" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "28882164", "url": "https://pubmed.ncbi.nlm.nih.gov/28882164" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" } ], "site_lbl": "Ser1248", "uniprot_canonical_ac": "P19174-1" }, { "start_pos": 783, "end_pos": 783, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by ITK, SYK and TXK", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16497976", "url": "https://pubmed.ncbi.nlm.nih.gov/16497976" }, { "database": "PubMed", "id": "1689310", "url": "https://pubmed.ncbi.nlm.nih.gov/1689310" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "7682059", "url": "https://pubmed.ncbi.nlm.nih.gov/7682059" }, { "database": "PubMed", "id": "8657103", "url": "https://pubmed.ncbi.nlm.nih.gov/8657103" }, { "database": "PubMed", "id": "8885868", "url": "https://pubmed.ncbi.nlm.nih.gov/8885868" }, { "database": "PRO", "id": "P19174", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P19174" }, { "database": "PubMed", "id": "14568990", "url": "https://pubmed.ncbi.nlm.nih.gov/14568990" }, { "database": "PubMed", "id": "15623534", "url": "https://pubmed.ncbi.nlm.nih.gov/15623534" }, { "database": "PubMed", "id": "15764700", "url": "https://pubmed.ncbi.nlm.nih.gov/15764700" }, { "database": "PubMed", "id": "16038803", "url": "https://pubmed.ncbi.nlm.nih.gov/16038803" }, { "database": "PubMed", "id": "16081816", "url": "https://pubmed.ncbi.nlm.nih.gov/16081816" }, { "database": "PubMed", "id": "16467851", "url": "https://pubmed.ncbi.nlm.nih.gov/16467851" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "17116690", "url": "https://pubmed.ncbi.nlm.nih.gov/17116690" }, { "database": "PubMed", "id": "17148460", "url": "https://pubmed.ncbi.nlm.nih.gov/17148460" }, { "database": "PubMed", "id": "17220479", "url": "https://pubmed.ncbi.nlm.nih.gov/17220479" }, { "database": "PubMed", "id": "19179337", "url": "https://pubmed.ncbi.nlm.nih.gov/19179337" }, { "database": "PubMed", "id": "21760611", "url": "https://pubmed.ncbi.nlm.nih.gov/21760611" }, { "database": "PubMed", "id": "22649724", "url": "https://pubmed.ncbi.nlm.nih.gov/22649724" }, { "database": "PubMed", "id": "22665519", "url": "https://pubmed.ncbi.nlm.nih.gov/22665519" }, { "database": "PubMed", "id": "22745786", "url": "https://pubmed.ncbi.nlm.nih.gov/22745786" }, { "database": "PubMed", "id": "23028325", "url": "https://pubmed.ncbi.nlm.nih.gov/23028325" }, { "database": "PubMed", "id": "23063561", "url": "https://pubmed.ncbi.nlm.nih.gov/23063561" }, { "database": "PubMed", "id": "23613900", "url": "https://pubmed.ncbi.nlm.nih.gov/23613900" }, { "database": "PubMed", "id": "23629676", "url": "https://pubmed.ncbi.nlm.nih.gov/23629676" }, { "database": "PubMed", "id": "24066087", "url": "https://pubmed.ncbi.nlm.nih.gov/24066087" }, { "database": "PubMed", "id": "24205378", "url": "https://pubmed.ncbi.nlm.nih.gov/24205378" }, { "database": "PubMed", "id": "25140833", "url": "https://pubmed.ncbi.nlm.nih.gov/25140833" }, { "database": "PubMed", "id": "25252913", "url": "https://pubmed.ncbi.nlm.nih.gov/25252913" }, { "database": "PubMed", "id": "25717186", "url": "https://pubmed.ncbi.nlm.nih.gov/25717186" }, { "database": "PubMed", "id": "25734483", "url": "https://pubmed.ncbi.nlm.nih.gov/25734483" }, { "database": "PubMed", "id": "25870599", "url": "https://pubmed.ncbi.nlm.nih.gov/25870599" }, { "database": "PubMed", "id": "25916191", "url": "https://pubmed.ncbi.nlm.nih.gov/25916191" }, { "database": "PubMed", "id": "26295810", "url": "https://pubmed.ncbi.nlm.nih.gov/26295810" }, { "database": "PubMed", "id": "27764189", "url": "https://pubmed.ncbi.nlm.nih.gov/27764189" }, { "database": "PubMed", "id": "27995987", "url": "https://pubmed.ncbi.nlm.nih.gov/27995987" }, { "database": "PubMed", "id": "28798148", "url": "https://pubmed.ncbi.nlm.nih.gov/28798148" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" }, { "database": "PubMed", "id": "29066806", "url": "https://pubmed.ncbi.nlm.nih.gov/29066806" }, { "database": "PubMed", "id": "29743977", "url": "https://pubmed.ncbi.nlm.nih.gov/29743977" }, { "database": "PubMed", "id": "29972810", "url": "https://pubmed.ncbi.nlm.nih.gov/29972810" }, { "database": "PubMed", "id": "30873169", "url": "https://pubmed.ncbi.nlm.nih.gov/30873169" }, { "database": "PubMed", "id": "35367415", "url": "https://pubmed.ncbi.nlm.nih.gov/35367415" }, { "database": "PubMed", "id": "9716455", "url": "https://pubmed.ncbi.nlm.nih.gov/9716455" }, { "database": "PubMed", "id": "15215251", "url": "https://pubmed.ncbi.nlm.nih.gov/15215251" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "PubMed", "id": "11564877", "url": "https://pubmed.ncbi.nlm.nih.gov/11564877" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.16525023", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Dual role of SLP-76 in mediating T cell receptor-induced activation of phospholipase C-gamma1.", "journal": "The Journal of biological chemistry", "date": "2007", "authors": "Beach D, Gonen R, Bogin Y, Reischl IG, Yablonski D", "reference": { "type": "PubMed", "id": "17148460", "url": "https://pubmed.ncbi.nlm.nih.gov/17148460" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 783, "end_pos": 783, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by ITK, SYK and TXK", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16497976", "url": "https://pubmed.ncbi.nlm.nih.gov/16497976" }, { "database": "PubMed", "id": "1689310", "url": "https://pubmed.ncbi.nlm.nih.gov/1689310" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "7682059", "url": "https://pubmed.ncbi.nlm.nih.gov/7682059" }, { "database": "PubMed", "id": "8657103", "url": "https://pubmed.ncbi.nlm.nih.gov/8657103" }, { "database": "PubMed", "id": "8885868", "url": "https://pubmed.ncbi.nlm.nih.gov/8885868" }, { "database": "PRO", "id": "P19174", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P19174" }, { "database": "PubMed", "id": "14568990", "url": "https://pubmed.ncbi.nlm.nih.gov/14568990" }, { "database": "PubMed", "id": "15623534", "url": "https://pubmed.ncbi.nlm.nih.gov/15623534" }, { "database": "PubMed", "id": "15764700", "url": "https://pubmed.ncbi.nlm.nih.gov/15764700" }, { "database": "PubMed", "id": "16038803", "url": "https://pubmed.ncbi.nlm.nih.gov/16038803" }, { "database": "PubMed", "id": "16081816", "url": "https://pubmed.ncbi.nlm.nih.gov/16081816" }, { "database": "PubMed", "id": "16467851", "url": "https://pubmed.ncbi.nlm.nih.gov/16467851" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "17116690", "url": "https://pubmed.ncbi.nlm.nih.gov/17116690" }, { "database": "PubMed", "id": "17148460", "url": "https://pubmed.ncbi.nlm.nih.gov/17148460" }, { "database": "PubMed", "id": "17220479", "url": "https://pubmed.ncbi.nlm.nih.gov/17220479" }, { "database": "PubMed", "id": "19179337", "url": "https://pubmed.ncbi.nlm.nih.gov/19179337" }, { "database": "PubMed", "id": "21760611", "url": "https://pubmed.ncbi.nlm.nih.gov/21760611" }, { "database": "PubMed", "id": "22649724", "url": "https://pubmed.ncbi.nlm.nih.gov/22649724" }, { "database": "PubMed", "id": "22665519", "url": "https://pubmed.ncbi.nlm.nih.gov/22665519" }, { "database": "PubMed", "id": "22745786", "url": "https://pubmed.ncbi.nlm.nih.gov/22745786" }, { "database": "PubMed", "id": "23028325", "url": "https://pubmed.ncbi.nlm.nih.gov/23028325" }, { "database": "PubMed", "id": "23063561", "url": "https://pubmed.ncbi.nlm.nih.gov/23063561" }, { "database": "PubMed", "id": "23613900", "url": "https://pubmed.ncbi.nlm.nih.gov/23613900" }, { "database": "PubMed", "id": "23629676", "url": "https://pubmed.ncbi.nlm.nih.gov/23629676" }, { "database": "PubMed", "id": "24066087", "url": "https://pubmed.ncbi.nlm.nih.gov/24066087" }, { "database": "PubMed", "id": "24205378", "url": "https://pubmed.ncbi.nlm.nih.gov/24205378" }, { "database": "PubMed", "id": "25140833", "url": "https://pubmed.ncbi.nlm.nih.gov/25140833" }, { "database": "PubMed", "id": "25252913", "url": "https://pubmed.ncbi.nlm.nih.gov/25252913" }, { "database": "PubMed", "id": "25717186", "url": "https://pubmed.ncbi.nlm.nih.gov/25717186" }, { "database": "PubMed", "id": "25734483", "url": "https://pubmed.ncbi.nlm.nih.gov/25734483" }, { "database": "PubMed", "id": "25870599", "url": "https://pubmed.ncbi.nlm.nih.gov/25870599" }, { "database": "PubMed", "id": "25916191", "url": "https://pubmed.ncbi.nlm.nih.gov/25916191" }, { "database": "PubMed", "id": "26295810", "url": "https://pubmed.ncbi.nlm.nih.gov/26295810" }, { "database": "PubMed", "id": "27764189", "url": "https://pubmed.ncbi.nlm.nih.gov/27764189" }, { "database": "PubMed", "id": "27995987", "url": "https://pubmed.ncbi.nlm.nih.gov/27995987" }, { "database": "PubMed", "id": "28798148", "url": "https://pubmed.ncbi.nlm.nih.gov/28798148" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" }, { "database": "PubMed", "id": "29066806", "url": "https://pubmed.ncbi.nlm.nih.gov/29066806" }, { "database": "PubMed", "id": "29743977", "url": "https://pubmed.ncbi.nlm.nih.gov/29743977" }, { "database": "PubMed", "id": "29972810", "url": "https://pubmed.ncbi.nlm.nih.gov/29972810" }, { "database": "PubMed", "id": "30873169", "url": "https://pubmed.ncbi.nlm.nih.gov/30873169" }, { "database": "PubMed", "id": "35367415", "url": "https://pubmed.ncbi.nlm.nih.gov/35367415" }, { "database": "PubMed", "id": "9716455", "url": "https://pubmed.ncbi.nlm.nih.gov/9716455" }, { "database": "PubMed", "id": "15215251", "url": "https://pubmed.ncbi.nlm.nih.gov/15215251" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "PubMed", "id": "11564877", "url": "https://pubmed.ncbi.nlm.nih.gov/11564877" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.17148460", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "CD2 and TCR synergize for the activation of phospholipase Cgamma1/calcium pathway at the immunological synapse.", "journal": "International immunology", "date": "2007", "authors": "Espagnolle N, Depoil D, Zaru R, Demeur C, Champagne E, Guiraud M, Valitutti S", "reference": { "type": "PubMed", "id": "17220479", "url": "https://pubmed.ncbi.nlm.nih.gov/17220479" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 783, "end_pos": 783, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by ITK, SYK and TXK", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16497976", "url": "https://pubmed.ncbi.nlm.nih.gov/16497976" }, { "database": "PubMed", "id": "1689310", "url": "https://pubmed.ncbi.nlm.nih.gov/1689310" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "7682059", "url": "https://pubmed.ncbi.nlm.nih.gov/7682059" }, { "database": "PubMed", "id": "8657103", "url": "https://pubmed.ncbi.nlm.nih.gov/8657103" }, { "database": "PubMed", "id": "8885868", "url": "https://pubmed.ncbi.nlm.nih.gov/8885868" }, { "database": "PRO", "id": "P19174", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P19174" }, { "database": "PubMed", "id": "14568990", "url": "https://pubmed.ncbi.nlm.nih.gov/14568990" }, { "database": "PubMed", "id": "15623534", "url": "https://pubmed.ncbi.nlm.nih.gov/15623534" }, { "database": "PubMed", "id": "15764700", "url": "https://pubmed.ncbi.nlm.nih.gov/15764700" }, { "database": "PubMed", "id": "16038803", "url": "https://pubmed.ncbi.nlm.nih.gov/16038803" }, { "database": "PubMed", "id": "16081816", "url": "https://pubmed.ncbi.nlm.nih.gov/16081816" }, { "database": "PubMed", "id": "16467851", "url": "https://pubmed.ncbi.nlm.nih.gov/16467851" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "17116690", "url": "https://pubmed.ncbi.nlm.nih.gov/17116690" }, { "database": "PubMed", "id": "17148460", "url": "https://pubmed.ncbi.nlm.nih.gov/17148460" }, { "database": "PubMed", "id": "17220479", "url": "https://pubmed.ncbi.nlm.nih.gov/17220479" }, { "database": "PubMed", "id": "19179337", "url": "https://pubmed.ncbi.nlm.nih.gov/19179337" }, { "database": "PubMed", "id": "21760611", "url": "https://pubmed.ncbi.nlm.nih.gov/21760611" }, { "database": "PubMed", "id": "22649724", "url": "https://pubmed.ncbi.nlm.nih.gov/22649724" }, { "database": "PubMed", "id": "22665519", "url": "https://pubmed.ncbi.nlm.nih.gov/22665519" }, { "database": "PubMed", "id": "22745786", "url": "https://pubmed.ncbi.nlm.nih.gov/22745786" }, { "database": "PubMed", "id": "23028325", "url": "https://pubmed.ncbi.nlm.nih.gov/23028325" }, { "database": "PubMed", "id": "23063561", "url": "https://pubmed.ncbi.nlm.nih.gov/23063561" }, { "database": "PubMed", "id": "23613900", "url": "https://pubmed.ncbi.nlm.nih.gov/23613900" }, { "database": "PubMed", "id": "23629676", "url": "https://pubmed.ncbi.nlm.nih.gov/23629676" }, { "database": "PubMed", "id": "24066087", "url": "https://pubmed.ncbi.nlm.nih.gov/24066087" }, { "database": "PubMed", "id": "24205378", "url": "https://pubmed.ncbi.nlm.nih.gov/24205378" }, { "database": "PubMed", "id": "25140833", "url": "https://pubmed.ncbi.nlm.nih.gov/25140833" }, { "database": "PubMed", "id": "25252913", "url": "https://pubmed.ncbi.nlm.nih.gov/25252913" }, { "database": "PubMed", "id": "25717186", "url": "https://pubmed.ncbi.nlm.nih.gov/25717186" }, { "database": "PubMed", "id": "25734483", "url": "https://pubmed.ncbi.nlm.nih.gov/25734483" }, { "database": "PubMed", "id": "25870599", "url": "https://pubmed.ncbi.nlm.nih.gov/25870599" }, { "database": "PubMed", "id": "25916191", "url": "https://pubmed.ncbi.nlm.nih.gov/25916191" }, { "database": "PubMed", "id": "26295810", "url": "https://pubmed.ncbi.nlm.nih.gov/26295810" }, { "database": "PubMed", "id": "27764189", "url": "https://pubmed.ncbi.nlm.nih.gov/27764189" }, { "database": "PubMed", "id": "27995987", "url": "https://pubmed.ncbi.nlm.nih.gov/27995987" }, { "database": "PubMed", "id": "28798148", "url": "https://pubmed.ncbi.nlm.nih.gov/28798148" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" }, { "database": "PubMed", "id": "29066806", "url": "https://pubmed.ncbi.nlm.nih.gov/29066806" }, { "database": "PubMed", "id": "29743977", "url": "https://pubmed.ncbi.nlm.nih.gov/29743977" }, { "database": "PubMed", "id": "29972810", "url": "https://pubmed.ncbi.nlm.nih.gov/29972810" }, { "database": "PubMed", "id": "30873169", "url": "https://pubmed.ncbi.nlm.nih.gov/30873169" }, { "database": "PubMed", "id": "35367415", "url": "https://pubmed.ncbi.nlm.nih.gov/35367415" }, { "database": "PubMed", "id": "9716455", "url": "https://pubmed.ncbi.nlm.nih.gov/9716455" }, { "database": "PubMed", "id": "15215251", "url": "https://pubmed.ncbi.nlm.nih.gov/15215251" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "PubMed", "id": "11564877", "url": "https://pubmed.ncbi.nlm.nih.gov/11564877" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.17220479", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "SLP-76 mediates and maintains activation of the Tec family kinase ITK via the T cell antigen receptor-induced association between SLP-76 and ITK.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2007", "authors": "Bogin Y, Ainey C, Beach D, Yablonski D", "reference": { "type": "PubMed", "id": "17420479", "url": "https://pubmed.ncbi.nlm.nih.gov/17420479" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 775, "end_pos": 775, "kinase_uniprot_canonical_ac": "Q08881-1", "kinase_gene_name": "ITK", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "17420479", "url": "https://pubmed.ncbi.nlm.nih.gov/17420479" } ], "site_lbl": "Tyr775", "uniprot_canonical_ac": "P19174-1" }, { "start_pos": 783, "end_pos": 783, "kinase_uniprot_canonical_ac": "Q08881-1", "kinase_gene_name": "ITK", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "17420479", "url": "https://pubmed.ncbi.nlm.nih.gov/17420479" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.17420479", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "EphA4 signaling regulates phospholipase Cgamma1 activation, cofilin membrane association, and dendritic spine morphology.", "journal": "The Journal of neuroscience : the official journal of the Society for Neuroscience", "date": "2007", "authors": "Zhou L, Martinez SJ, Haber M, Jones EV, Bouvier D, Doucet G, Corera AT, Fon EA, Zisch AH, Murai KK", "reference": { "type": "PubMed", "id": "17494698", "url": "https://pubmed.ncbi.nlm.nih.gov/17494698" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 783, "end_pos": 783, "kinase_uniprot_canonical_ac": "P54764-1", "kinase_gene_name": "EPHA4", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "17494698", "url": "https://pubmed.ncbi.nlm.nih.gov/17494698" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.17494698", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Protein kinase Cepsilon may act as EGF-inducible scaffold protein for phospholipase Cgamma1.", "journal": "Cellular signalling", "date": "2007", "authors": "Valkova C, Maerz S, Imhof D, Liebmann C", "reference": { "type": "PubMed", "id": "17561374", "url": "https://pubmed.ncbi.nlm.nih.gov/17561374" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 845, "end_pos": 845, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "17561374", "url": "https://pubmed.ncbi.nlm.nih.gov/17561374" } ], "site_lbl": "Tyr845", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.17561374", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization and cDNA cloning of phospholipase C-gamma, a major substrate for heparin-binding growth factor 1 (acidic fibroblast growth factor)-activated tyrosine kinase.", "journal": "Molecular and cellular biology", "date": "1990", "authors": "Burgess WH, Dionne CA, Kaplow J, Mudd R, Friesel R, Zilberstein A, Schlessinger J, Jaye M", "reference": { "type": "PubMed", "id": "2167438", "url": "https://pubmed.ncbi.nlm.nih.gov/2167438" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.2167438", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The death receptor CD95 activates the cofilin pathway to stimulate tumour cell invasion.", "journal": "EMBO reports", "date": "2011-09-01", "authors": "Steller Ernst J A, Ritsma Laila, Raats Danielle A E, Hoogwater Frederik J H, Emmink Benjamin L, Govaert Klaas M, Laoukili Jamila, Rinkes Inne H M Borel, van Rheenen Jacco, Kranenburg Onno", "reference": { "type": "PubMed", "id": "21760611", "url": "https://pubmed.ncbi.nlm.nih.gov/21760611" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 783, "end_pos": 783, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by ITK, SYK and TXK", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16497976", "url": "https://pubmed.ncbi.nlm.nih.gov/16497976" }, { "database": "PubMed", "id": "1689310", "url": "https://pubmed.ncbi.nlm.nih.gov/1689310" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "7682059", "url": "https://pubmed.ncbi.nlm.nih.gov/7682059" }, { "database": "PubMed", "id": "8657103", "url": "https://pubmed.ncbi.nlm.nih.gov/8657103" }, { "database": "PubMed", "id": "8885868", "url": "https://pubmed.ncbi.nlm.nih.gov/8885868" }, { "database": "PRO", "id": "P19174", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P19174" }, { "database": "PubMed", "id": "14568990", "url": "https://pubmed.ncbi.nlm.nih.gov/14568990" }, { "database": "PubMed", "id": "15623534", "url": "https://pubmed.ncbi.nlm.nih.gov/15623534" }, { "database": "PubMed", "id": "15764700", "url": "https://pubmed.ncbi.nlm.nih.gov/15764700" }, { "database": "PubMed", "id": "16038803", "url": "https://pubmed.ncbi.nlm.nih.gov/16038803" }, { "database": "PubMed", "id": "16081816", "url": "https://pubmed.ncbi.nlm.nih.gov/16081816" }, { "database": "PubMed", "id": "16467851", "url": "https://pubmed.ncbi.nlm.nih.gov/16467851" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "17116690", "url": "https://pubmed.ncbi.nlm.nih.gov/17116690" }, { "database": "PubMed", "id": "17148460", "url": "https://pubmed.ncbi.nlm.nih.gov/17148460" }, { "database": "PubMed", "id": "17220479", "url": "https://pubmed.ncbi.nlm.nih.gov/17220479" }, { "database": "PubMed", "id": "19179337", "url": "https://pubmed.ncbi.nlm.nih.gov/19179337" }, { "database": "PubMed", "id": "21760611", "url": "https://pubmed.ncbi.nlm.nih.gov/21760611" }, { "database": "PubMed", "id": "22649724", "url": "https://pubmed.ncbi.nlm.nih.gov/22649724" }, { "database": "PubMed", "id": "22665519", "url": "https://pubmed.ncbi.nlm.nih.gov/22665519" }, { "database": "PubMed", "id": "22745786", "url": "https://pubmed.ncbi.nlm.nih.gov/22745786" }, { "database": "PubMed", "id": "23028325", "url": "https://pubmed.ncbi.nlm.nih.gov/23028325" }, { "database": "PubMed", "id": "23063561", "url": "https://pubmed.ncbi.nlm.nih.gov/23063561" }, { "database": "PubMed", "id": "23613900", "url": "https://pubmed.ncbi.nlm.nih.gov/23613900" }, { "database": "PubMed", "id": "23629676", "url": "https://pubmed.ncbi.nlm.nih.gov/23629676" }, { "database": "PubMed", "id": "24066087", "url": "https://pubmed.ncbi.nlm.nih.gov/24066087" }, { "database": "PubMed", "id": "24205378", "url": "https://pubmed.ncbi.nlm.nih.gov/24205378" }, { "database": "PubMed", "id": "25140833", "url": "https://pubmed.ncbi.nlm.nih.gov/25140833" }, { "database": "PubMed", "id": "25252913", "url": "https://pubmed.ncbi.nlm.nih.gov/25252913" }, { "database": "PubMed", "id": "25717186", "url": "https://pubmed.ncbi.nlm.nih.gov/25717186" }, { "database": "PubMed", "id": "25734483", "url": "https://pubmed.ncbi.nlm.nih.gov/25734483" }, { "database": "PubMed", "id": "25870599", "url": "https://pubmed.ncbi.nlm.nih.gov/25870599" }, { "database": "PubMed", "id": "25916191", "url": "https://pubmed.ncbi.nlm.nih.gov/25916191" }, { "database": "PubMed", "id": "26295810", "url": "https://pubmed.ncbi.nlm.nih.gov/26295810" }, { "database": "PubMed", "id": "27764189", "url": "https://pubmed.ncbi.nlm.nih.gov/27764189" }, { "database": "PubMed", "id": "27995987", "url": "https://pubmed.ncbi.nlm.nih.gov/27995987" }, { "database": "PubMed", "id": "28798148", "url": "https://pubmed.ncbi.nlm.nih.gov/28798148" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" }, { "database": "PubMed", "id": "29066806", "url": "https://pubmed.ncbi.nlm.nih.gov/29066806" }, { "database": "PubMed", "id": "29743977", "url": "https://pubmed.ncbi.nlm.nih.gov/29743977" }, { "database": "PubMed", "id": "29972810", "url": "https://pubmed.ncbi.nlm.nih.gov/29972810" }, { "database": "PubMed", "id": "30873169", "url": "https://pubmed.ncbi.nlm.nih.gov/30873169" }, { "database": "PubMed", "id": "35367415", "url": "https://pubmed.ncbi.nlm.nih.gov/35367415" }, { "database": "PubMed", "id": "9716455", "url": "https://pubmed.ncbi.nlm.nih.gov/9716455" }, { "database": "PubMed", "id": "15215251", "url": "https://pubmed.ncbi.nlm.nih.gov/15215251" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "PubMed", "id": "11564877", "url": "https://pubmed.ncbi.nlm.nih.gov/11564877" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.21760611", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "In Vivo Consequences of Disrupting SH3-Mediated Interactions of the Inducible T-Cell Kinase.", "journal": "Journal of signal transduction", "date": "2012", "authors": "Levytskyy Roman M, Hirve Nupura, Guimond David M, Min Lie, Andreotti Amy H, Tsoukas Constantine D", "reference": { "type": "PubMed", "id": "22649724", "url": "https://pubmed.ncbi.nlm.nih.gov/22649724" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 783, "end_pos": 783, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by ITK, SYK and TXK", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16497976", "url": "https://pubmed.ncbi.nlm.nih.gov/16497976" }, { "database": "PubMed", "id": "1689310", "url": "https://pubmed.ncbi.nlm.nih.gov/1689310" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "7682059", "url": "https://pubmed.ncbi.nlm.nih.gov/7682059" }, { "database": "PubMed", "id": "8657103", "url": "https://pubmed.ncbi.nlm.nih.gov/8657103" }, { "database": "PubMed", "id": "8885868", "url": "https://pubmed.ncbi.nlm.nih.gov/8885868" }, { "database": "PRO", "id": "P19174", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P19174" }, { "database": "PubMed", "id": "14568990", "url": "https://pubmed.ncbi.nlm.nih.gov/14568990" }, { "database": "PubMed", "id": "15623534", "url": "https://pubmed.ncbi.nlm.nih.gov/15623534" }, { "database": "PubMed", "id": "15764700", "url": "https://pubmed.ncbi.nlm.nih.gov/15764700" }, { "database": "PubMed", "id": "16038803", "url": "https://pubmed.ncbi.nlm.nih.gov/16038803" }, { "database": "PubMed", "id": "16081816", "url": "https://pubmed.ncbi.nlm.nih.gov/16081816" }, { "database": "PubMed", "id": "16467851", "url": "https://pubmed.ncbi.nlm.nih.gov/16467851" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "17116690", "url": "https://pubmed.ncbi.nlm.nih.gov/17116690" }, { "database": "PubMed", "id": "17148460", "url": "https://pubmed.ncbi.nlm.nih.gov/17148460" }, { "database": "PubMed", "id": "17220479", "url": "https://pubmed.ncbi.nlm.nih.gov/17220479" }, { "database": "PubMed", "id": "19179337", "url": "https://pubmed.ncbi.nlm.nih.gov/19179337" }, { "database": "PubMed", "id": "21760611", "url": "https://pubmed.ncbi.nlm.nih.gov/21760611" }, { "database": "PubMed", "id": "22649724", "url": "https://pubmed.ncbi.nlm.nih.gov/22649724" }, { "database": "PubMed", "id": "22665519", "url": "https://pubmed.ncbi.nlm.nih.gov/22665519" }, { "database": "PubMed", "id": "22745786", "url": "https://pubmed.ncbi.nlm.nih.gov/22745786" }, { "database": "PubMed", "id": "23028325", "url": "https://pubmed.ncbi.nlm.nih.gov/23028325" }, { "database": "PubMed", "id": "23063561", "url": "https://pubmed.ncbi.nlm.nih.gov/23063561" }, { "database": "PubMed", "id": "23613900", "url": "https://pubmed.ncbi.nlm.nih.gov/23613900" }, { "database": "PubMed", "id": "23629676", "url": "https://pubmed.ncbi.nlm.nih.gov/23629676" }, { "database": "PubMed", "id": "24066087", "url": "https://pubmed.ncbi.nlm.nih.gov/24066087" }, { "database": "PubMed", "id": "24205378", "url": "https://pubmed.ncbi.nlm.nih.gov/24205378" }, { "database": "PubMed", "id": "25140833", "url": "https://pubmed.ncbi.nlm.nih.gov/25140833" }, { "database": "PubMed", "id": "25252913", "url": "https://pubmed.ncbi.nlm.nih.gov/25252913" }, { "database": "PubMed", "id": "25717186", "url": "https://pubmed.ncbi.nlm.nih.gov/25717186" }, { "database": "PubMed", "id": "25734483", "url": "https://pubmed.ncbi.nlm.nih.gov/25734483" }, { "database": "PubMed", "id": "25870599", "url": "https://pubmed.ncbi.nlm.nih.gov/25870599" }, { "database": "PubMed", "id": "25916191", "url": "https://pubmed.ncbi.nlm.nih.gov/25916191" }, { "database": "PubMed", "id": "26295810", "url": "https://pubmed.ncbi.nlm.nih.gov/26295810" }, { "database": "PubMed", "id": "27764189", "url": "https://pubmed.ncbi.nlm.nih.gov/27764189" }, { "database": "PubMed", "id": "27995987", "url": "https://pubmed.ncbi.nlm.nih.gov/27995987" }, { "database": "PubMed", "id": "28798148", "url": "https://pubmed.ncbi.nlm.nih.gov/28798148" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" }, { "database": "PubMed", "id": "29066806", "url": "https://pubmed.ncbi.nlm.nih.gov/29066806" }, { "database": "PubMed", "id": "29743977", "url": "https://pubmed.ncbi.nlm.nih.gov/29743977" }, { "database": "PubMed", "id": "29972810", "url": "https://pubmed.ncbi.nlm.nih.gov/29972810" }, { "database": "PubMed", "id": "30873169", "url": "https://pubmed.ncbi.nlm.nih.gov/30873169" }, { "database": "PubMed", "id": "35367415", "url": "https://pubmed.ncbi.nlm.nih.gov/35367415" }, { "database": "PubMed", "id": "9716455", "url": "https://pubmed.ncbi.nlm.nih.gov/9716455" }, { "database": "PubMed", "id": "15215251", "url": "https://pubmed.ncbi.nlm.nih.gov/15215251" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "PubMed", "id": "11564877", "url": "https://pubmed.ncbi.nlm.nih.gov/11564877" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.22649724", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Overexpression of activated phospholipase C\u03b31 is a risk factor for distant metastases in T1-T2, N0 breast cancer patients undergoing adjuvant chemotherapy.", "journal": "International journal of cancer", "date": "2013-03-01", "authors": "Lattanzio Rossano, Marchisio Marco, La Sorda Rossana, Tinari Nicola, Falasca Marco, Alberti Saverio, Miscia Sebastiano, Ercolani Cristiana, Di Benedetto Anna, Perracchio Letizia, Melucci Elisa, Iacobelli Stefano, Mottolese Marcella, Natali Pier Giorgio, Piantelli Mauro,", "reference": { "type": "PubMed", "id": "22847294", "url": "https://pubmed.ncbi.nlm.nih.gov/22847294" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 1253, "end_pos": 1253, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "15144186", "url": "https://pubmed.ncbi.nlm.nih.gov/15144186" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "18707149", "url": "https://pubmed.ncbi.nlm.nih.gov/18707149" }, { "database": "PubMed", "id": "7682059", "url": "https://pubmed.ncbi.nlm.nih.gov/7682059" }, { "database": "PubMed", "id": "8885868", "url": "https://pubmed.ncbi.nlm.nih.gov/8885868" }, { "database": "PRO", "id": "P19174", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P19174" }, { "database": "PubMed", "id": "22847294", "url": "https://pubmed.ncbi.nlm.nih.gov/22847294" } ], "site_lbl": "Tyr1253", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.22847294", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Kaposi's sarcoma herpesvirus K15 protein contributes to virus-induced angiogenesis by recruiting PLC\u03b31 and activating NFAT1-dependent RCAN1 expression.", "journal": "PLoS pathogens", "date": "2012-09", "authors": "Bala Kiran, Bosco Raffaella, Gramolelli Silvia, Haas Darya A, Kati Semra, Pietrek Marcel, H\u00e4vemeier Anika, Yakushko Yuri, Singh Vivek Vikram, Dittrich-Breiholz Oliver, Kracht Michael, Schulz Thomas F", "reference": { "type": "PubMed", "id": "23028325", "url": "https://pubmed.ncbi.nlm.nih.gov/23028325" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 481, "end_pos": 481, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "19901323", "url": "https://pubmed.ncbi.nlm.nih.gov/19901323" }, { "database": "PubMed", "id": "23028325", "url": "https://pubmed.ncbi.nlm.nih.gov/23028325" } ], "site_lbl": "Tyr481", "uniprot_canonical_ac": "P19174-1" }, { "start_pos": 783, "end_pos": 783, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by ITK, SYK and TXK", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16497976", "url": "https://pubmed.ncbi.nlm.nih.gov/16497976" }, { "database": "PubMed", "id": "1689310", "url": "https://pubmed.ncbi.nlm.nih.gov/1689310" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "7682059", "url": "https://pubmed.ncbi.nlm.nih.gov/7682059" }, { "database": "PubMed", "id": "8657103", "url": "https://pubmed.ncbi.nlm.nih.gov/8657103" }, { "database": "PubMed", "id": "8885868", "url": "https://pubmed.ncbi.nlm.nih.gov/8885868" }, { "database": "PRO", "id": "P19174", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P19174" }, { "database": "PubMed", "id": "14568990", "url": "https://pubmed.ncbi.nlm.nih.gov/14568990" }, { "database": "PubMed", "id": "15623534", "url": "https://pubmed.ncbi.nlm.nih.gov/15623534" }, { "database": "PubMed", "id": "15764700", "url": "https://pubmed.ncbi.nlm.nih.gov/15764700" }, { "database": "PubMed", "id": "16038803", "url": "https://pubmed.ncbi.nlm.nih.gov/16038803" }, { "database": "PubMed", "id": "16081816", "url": "https://pubmed.ncbi.nlm.nih.gov/16081816" }, { "database": "PubMed", "id": "16467851", "url": "https://pubmed.ncbi.nlm.nih.gov/16467851" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "17116690", "url": "https://pubmed.ncbi.nlm.nih.gov/17116690" }, { "database": "PubMed", "id": "17148460", "url": "https://pubmed.ncbi.nlm.nih.gov/17148460" }, { "database": "PubMed", "id": "17220479", "url": "https://pubmed.ncbi.nlm.nih.gov/17220479" }, { "database": "PubMed", "id": "19179337", "url": "https://pubmed.ncbi.nlm.nih.gov/19179337" }, { "database": "PubMed", "id": "21760611", "url": "https://pubmed.ncbi.nlm.nih.gov/21760611" }, { "database": "PubMed", "id": "22649724", "url": "https://pubmed.ncbi.nlm.nih.gov/22649724" }, { "database": "PubMed", "id": "22665519", "url": "https://pubmed.ncbi.nlm.nih.gov/22665519" }, { "database": "PubMed", "id": "22745786", "url": "https://pubmed.ncbi.nlm.nih.gov/22745786" }, { "database": "PubMed", "id": "23028325", "url": "https://pubmed.ncbi.nlm.nih.gov/23028325" }, { "database": "PubMed", "id": "23063561", "url": "https://pubmed.ncbi.nlm.nih.gov/23063561" }, { "database": "PubMed", "id": "23613900", "url": "https://pubmed.ncbi.nlm.nih.gov/23613900" }, { "database": "PubMed", "id": "23629676", "url": "https://pubmed.ncbi.nlm.nih.gov/23629676" }, { "database": "PubMed", "id": "24066087", "url": "https://pubmed.ncbi.nlm.nih.gov/24066087" }, { "database": "PubMed", "id": "24205378", "url": "https://pubmed.ncbi.nlm.nih.gov/24205378" }, { "database": "PubMed", "id": "25140833", "url": "https://pubmed.ncbi.nlm.nih.gov/25140833" }, { "database": "PubMed", "id": "25252913", "url": "https://pubmed.ncbi.nlm.nih.gov/25252913" }, { "database": "PubMed", "id": "25717186", "url": "https://pubmed.ncbi.nlm.nih.gov/25717186" }, { "database": "PubMed", "id": "25734483", "url": "https://pubmed.ncbi.nlm.nih.gov/25734483" }, { "database": "PubMed", "id": "25870599", "url": "https://pubmed.ncbi.nlm.nih.gov/25870599" }, { "database": "PubMed", "id": "25916191", "url": "https://pubmed.ncbi.nlm.nih.gov/25916191" }, { "database": "PubMed", "id": "26295810", "url": "https://pubmed.ncbi.nlm.nih.gov/26295810" }, { "database": "PubMed", "id": "27764189", "url": "https://pubmed.ncbi.nlm.nih.gov/27764189" }, { "database": "PubMed", "id": "27995987", "url": "https://pubmed.ncbi.nlm.nih.gov/27995987" }, { "database": "PubMed", "id": "28798148", "url": "https://pubmed.ncbi.nlm.nih.gov/28798148" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" }, { "database": "PubMed", "id": "29066806", "url": "https://pubmed.ncbi.nlm.nih.gov/29066806" }, { "database": "PubMed", "id": "29743977", "url": "https://pubmed.ncbi.nlm.nih.gov/29743977" }, { "database": "PubMed", "id": "29972810", "url": "https://pubmed.ncbi.nlm.nih.gov/29972810" }, { "database": "PubMed", "id": "30873169", "url": "https://pubmed.ncbi.nlm.nih.gov/30873169" }, { "database": "PubMed", "id": "35367415", "url": "https://pubmed.ncbi.nlm.nih.gov/35367415" }, { "database": "PubMed", "id": "9716455", "url": "https://pubmed.ncbi.nlm.nih.gov/9716455" }, { "database": "PubMed", "id": "15215251", "url": "https://pubmed.ncbi.nlm.nih.gov/15215251" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "PubMed", "id": "11564877", "url": "https://pubmed.ncbi.nlm.nih.gov/11564877" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.23028325", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structural and functional integration of the PLC\u03b3 interaction domains critical for regulatory mechanisms and signaling deregulation.", "journal": "Structure (London, England : 1993)", "date": "2012-12-05", "authors": "Bunney Tom D, Esposito Diego, Mas-Droux Corine, Lamber Ekatarina, Baxendale Rhona W, Martins Marta, Cole Ambrose, Svergun Dmitri, Driscoll Paul C, Katan Matilda", "reference": { "type": "PubMed", "id": "23063561", "url": "https://pubmed.ncbi.nlm.nih.gov/23063561" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 783, "end_pos": 783, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by ITK, SYK and TXK", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16497976", "url": "https://pubmed.ncbi.nlm.nih.gov/16497976" }, { "database": "PubMed", "id": "1689310", "url": "https://pubmed.ncbi.nlm.nih.gov/1689310" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "7682059", "url": "https://pubmed.ncbi.nlm.nih.gov/7682059" }, { "database": "PubMed", "id": "8657103", "url": "https://pubmed.ncbi.nlm.nih.gov/8657103" }, { "database": "PubMed", "id": "8885868", "url": "https://pubmed.ncbi.nlm.nih.gov/8885868" }, { "database": "PRO", "id": "P19174", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P19174" }, { "database": "PubMed", "id": "14568990", "url": "https://pubmed.ncbi.nlm.nih.gov/14568990" }, { "database": "PubMed", "id": "15623534", "url": "https://pubmed.ncbi.nlm.nih.gov/15623534" }, { "database": "PubMed", "id": "15764700", "url": "https://pubmed.ncbi.nlm.nih.gov/15764700" }, { "database": "PubMed", "id": "16038803", "url": "https://pubmed.ncbi.nlm.nih.gov/16038803" }, { "database": "PubMed", "id": "16081816", "url": "https://pubmed.ncbi.nlm.nih.gov/16081816" }, { "database": "PubMed", "id": "16467851", "url": "https://pubmed.ncbi.nlm.nih.gov/16467851" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "17116690", "url": "https://pubmed.ncbi.nlm.nih.gov/17116690" }, { "database": "PubMed", "id": "17148460", "url": "https://pubmed.ncbi.nlm.nih.gov/17148460" }, { "database": "PubMed", "id": "17220479", "url": "https://pubmed.ncbi.nlm.nih.gov/17220479" }, { "database": "PubMed", "id": "19179337", "url": "https://pubmed.ncbi.nlm.nih.gov/19179337" }, { "database": "PubMed", "id": "21760611", "url": "https://pubmed.ncbi.nlm.nih.gov/21760611" }, { "database": "PubMed", "id": "22649724", "url": "https://pubmed.ncbi.nlm.nih.gov/22649724" }, { "database": "PubMed", "id": "22665519", "url": "https://pubmed.ncbi.nlm.nih.gov/22665519" }, { "database": "PubMed", "id": "22745786", "url": "https://pubmed.ncbi.nlm.nih.gov/22745786" }, { "database": "PubMed", "id": "23028325", "url": "https://pubmed.ncbi.nlm.nih.gov/23028325" }, { "database": "PubMed", "id": "23063561", "url": "https://pubmed.ncbi.nlm.nih.gov/23063561" }, { "database": "PubMed", "id": "23613900", "url": "https://pubmed.ncbi.nlm.nih.gov/23613900" }, { "database": "PubMed", "id": "23629676", "url": "https://pubmed.ncbi.nlm.nih.gov/23629676" }, { "database": "PubMed", "id": "24066087", "url": "https://pubmed.ncbi.nlm.nih.gov/24066087" }, { "database": "PubMed", "id": "24205378", "url": "https://pubmed.ncbi.nlm.nih.gov/24205378" }, { "database": "PubMed", "id": "25140833", "url": "https://pubmed.ncbi.nlm.nih.gov/25140833" }, { "database": "PubMed", "id": "25252913", "url": "https://pubmed.ncbi.nlm.nih.gov/25252913" }, { "database": "PubMed", "id": "25717186", "url": "https://pubmed.ncbi.nlm.nih.gov/25717186" }, { "database": "PubMed", "id": "25734483", "url": "https://pubmed.ncbi.nlm.nih.gov/25734483" }, { "database": "PubMed", "id": "25870599", "url": "https://pubmed.ncbi.nlm.nih.gov/25870599" }, { "database": "PubMed", "id": "25916191", "url": "https://pubmed.ncbi.nlm.nih.gov/25916191" }, { "database": "PubMed", "id": "26295810", "url": "https://pubmed.ncbi.nlm.nih.gov/26295810" }, { "database": "PubMed", "id": "27764189", "url": "https://pubmed.ncbi.nlm.nih.gov/27764189" }, { "database": "PubMed", "id": "27995987", "url": "https://pubmed.ncbi.nlm.nih.gov/27995987" }, { "database": "PubMed", "id": "28798148", "url": "https://pubmed.ncbi.nlm.nih.gov/28798148" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" }, { "database": "PubMed", "id": "29066806", "url": "https://pubmed.ncbi.nlm.nih.gov/29066806" }, { "database": "PubMed", "id": "29743977", "url": "https://pubmed.ncbi.nlm.nih.gov/29743977" }, { "database": "PubMed", "id": "29972810", "url": "https://pubmed.ncbi.nlm.nih.gov/29972810" }, { "database": "PubMed", "id": "30873169", "url": "https://pubmed.ncbi.nlm.nih.gov/30873169" }, { "database": "PubMed", "id": "35367415", "url": "https://pubmed.ncbi.nlm.nih.gov/35367415" }, { "database": "PubMed", "id": "9716455", "url": "https://pubmed.ncbi.nlm.nih.gov/9716455" }, { "database": "PubMed", "id": "15215251", "url": "https://pubmed.ncbi.nlm.nih.gov/15215251" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "PubMed", "id": "11564877", "url": "https://pubmed.ncbi.nlm.nih.gov/11564877" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.23063561", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "PKG II inhibits EGF/EGFR-induced migration of gastric cancer cells.", "journal": "PloS one", "date": "2013", "authors": "Jiang Lu, Lan Ting, Chen Yongchang, Sang Jianrong, Li Yueying, Wu Min, Tao Yan, Wang Ying, Qian Hai, Gu Luo", "reference": { "type": "PubMed", "id": "23613900", "url": "https://pubmed.ncbi.nlm.nih.gov/23613900" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 783, "end_pos": 783, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by ITK, SYK and TXK", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16497976", "url": "https://pubmed.ncbi.nlm.nih.gov/16497976" }, { "database": "PubMed", "id": "1689310", "url": "https://pubmed.ncbi.nlm.nih.gov/1689310" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "7682059", "url": "https://pubmed.ncbi.nlm.nih.gov/7682059" }, { "database": "PubMed", "id": "8657103", "url": "https://pubmed.ncbi.nlm.nih.gov/8657103" }, { "database": "PubMed", "id": "8885868", "url": "https://pubmed.ncbi.nlm.nih.gov/8885868" }, { "database": "PRO", "id": "P19174", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P19174" }, { "database": "PubMed", "id": "14568990", "url": "https://pubmed.ncbi.nlm.nih.gov/14568990" }, { "database": "PubMed", "id": "15623534", "url": "https://pubmed.ncbi.nlm.nih.gov/15623534" }, { "database": "PubMed", "id": "15764700", "url": "https://pubmed.ncbi.nlm.nih.gov/15764700" }, { "database": "PubMed", "id": "16038803", "url": "https://pubmed.ncbi.nlm.nih.gov/16038803" }, { "database": "PubMed", "id": "16081816", "url": "https://pubmed.ncbi.nlm.nih.gov/16081816" }, { "database": "PubMed", "id": "16467851", "url": "https://pubmed.ncbi.nlm.nih.gov/16467851" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "17116690", "url": "https://pubmed.ncbi.nlm.nih.gov/17116690" }, { "database": "PubMed", "id": "17148460", "url": "https://pubmed.ncbi.nlm.nih.gov/17148460" }, { "database": "PubMed", "id": "17220479", "url": "https://pubmed.ncbi.nlm.nih.gov/17220479" }, { "database": "PubMed", "id": "19179337", "url": "https://pubmed.ncbi.nlm.nih.gov/19179337" }, { "database": "PubMed", "id": "21760611", "url": "https://pubmed.ncbi.nlm.nih.gov/21760611" }, { "database": "PubMed", "id": "22649724", "url": "https://pubmed.ncbi.nlm.nih.gov/22649724" }, { "database": "PubMed", "id": "22665519", "url": "https://pubmed.ncbi.nlm.nih.gov/22665519" }, { "database": "PubMed", "id": "22745786", "url": "https://pubmed.ncbi.nlm.nih.gov/22745786" }, { "database": "PubMed", "id": "23028325", "url": "https://pubmed.ncbi.nlm.nih.gov/23028325" }, { "database": "PubMed", "id": "23063561", "url": "https://pubmed.ncbi.nlm.nih.gov/23063561" }, { "database": "PubMed", "id": "23613900", "url": "https://pubmed.ncbi.nlm.nih.gov/23613900" }, { "database": "PubMed", "id": "23629676", "url": "https://pubmed.ncbi.nlm.nih.gov/23629676" }, { "database": "PubMed", "id": "24066087", "url": "https://pubmed.ncbi.nlm.nih.gov/24066087" }, { "database": "PubMed", "id": "24205378", "url": "https://pubmed.ncbi.nlm.nih.gov/24205378" }, { "database": "PubMed", "id": "25140833", "url": "https://pubmed.ncbi.nlm.nih.gov/25140833" }, { "database": "PubMed", "id": "25252913", "url": "https://pubmed.ncbi.nlm.nih.gov/25252913" }, { "database": "PubMed", "id": "25717186", "url": "https://pubmed.ncbi.nlm.nih.gov/25717186" }, { "database": "PubMed", "id": "25734483", "url": "https://pubmed.ncbi.nlm.nih.gov/25734483" }, { "database": "PubMed", "id": "25870599", "url": "https://pubmed.ncbi.nlm.nih.gov/25870599" }, { "database": "PubMed", "id": "25916191", "url": "https://pubmed.ncbi.nlm.nih.gov/25916191" }, { "database": "PubMed", "id": "26295810", "url": "https://pubmed.ncbi.nlm.nih.gov/26295810" }, { "database": "PubMed", "id": "27764189", "url": "https://pubmed.ncbi.nlm.nih.gov/27764189" }, { "database": "PubMed", "id": "27995987", "url": "https://pubmed.ncbi.nlm.nih.gov/27995987" }, { "database": "PubMed", "id": "28798148", "url": "https://pubmed.ncbi.nlm.nih.gov/28798148" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" }, { "database": "PubMed", "id": "29066806", "url": "https://pubmed.ncbi.nlm.nih.gov/29066806" }, { "database": "PubMed", "id": "29743977", "url": "https://pubmed.ncbi.nlm.nih.gov/29743977" }, { "database": "PubMed", "id": "29972810", "url": "https://pubmed.ncbi.nlm.nih.gov/29972810" }, { "database": "PubMed", "id": "30873169", "url": "https://pubmed.ncbi.nlm.nih.gov/30873169" }, { "database": "PubMed", "id": "35367415", "url": "https://pubmed.ncbi.nlm.nih.gov/35367415" }, { "database": "PubMed", "id": "9716455", "url": "https://pubmed.ncbi.nlm.nih.gov/9716455" }, { "database": "PubMed", "id": "15215251", "url": "https://pubmed.ncbi.nlm.nih.gov/15215251" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "PubMed", "id": "11564877", "url": "https://pubmed.ncbi.nlm.nih.gov/11564877" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.23613900", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Oxidative stress mediates the disruption of airway epithelial tight junctions through a TRPM2-PLC\u03b31-PKC\u03b1 signaling pathway.", "journal": "International journal of molecular sciences", "date": "2013-04-29", "authors": "Xu Rui, Li Qi, Zhou Xiang-Dong, Perelman Juliy M, Kolosov Victor P", "reference": { "type": "PubMed", "id": "23629676", "url": "https://pubmed.ncbi.nlm.nih.gov/23629676" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 783, "end_pos": 783, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by ITK, SYK and TXK", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16497976", "url": "https://pubmed.ncbi.nlm.nih.gov/16497976" }, { "database": "PubMed", "id": "1689310", "url": "https://pubmed.ncbi.nlm.nih.gov/1689310" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "7682059", "url": "https://pubmed.ncbi.nlm.nih.gov/7682059" }, { "database": "PubMed", "id": "8657103", "url": "https://pubmed.ncbi.nlm.nih.gov/8657103" }, { "database": "PubMed", "id": "8885868", "url": "https://pubmed.ncbi.nlm.nih.gov/8885868" }, { "database": "PRO", "id": "P19174", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P19174" }, { "database": "PubMed", "id": "14568990", "url": "https://pubmed.ncbi.nlm.nih.gov/14568990" }, { "database": "PubMed", "id": "15623534", "url": "https://pubmed.ncbi.nlm.nih.gov/15623534" }, { "database": "PubMed", "id": "15764700", "url": "https://pubmed.ncbi.nlm.nih.gov/15764700" }, { "database": "PubMed", "id": "16038803", "url": "https://pubmed.ncbi.nlm.nih.gov/16038803" }, { "database": "PubMed", "id": "16081816", "url": "https://pubmed.ncbi.nlm.nih.gov/16081816" }, { "database": "PubMed", "id": "16467851", "url": "https://pubmed.ncbi.nlm.nih.gov/16467851" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "17116690", "url": "https://pubmed.ncbi.nlm.nih.gov/17116690" }, { "database": "PubMed", "id": "17148460", "url": "https://pubmed.ncbi.nlm.nih.gov/17148460" }, { "database": "PubMed", "id": "17220479", "url": "https://pubmed.ncbi.nlm.nih.gov/17220479" }, { "database": "PubMed", "id": "19179337", "url": "https://pubmed.ncbi.nlm.nih.gov/19179337" }, { "database": "PubMed", "id": "21760611", "url": "https://pubmed.ncbi.nlm.nih.gov/21760611" }, { "database": "PubMed", "id": "22649724", "url": "https://pubmed.ncbi.nlm.nih.gov/22649724" }, { "database": "PubMed", "id": "22665519", "url": "https://pubmed.ncbi.nlm.nih.gov/22665519" }, { "database": "PubMed", "id": "22745786", "url": "https://pubmed.ncbi.nlm.nih.gov/22745786" }, { "database": "PubMed", "id": "23028325", "url": "https://pubmed.ncbi.nlm.nih.gov/23028325" }, { "database": "PubMed", "id": "23063561", "url": "https://pubmed.ncbi.nlm.nih.gov/23063561" }, { "database": "PubMed", "id": "23613900", "url": "https://pubmed.ncbi.nlm.nih.gov/23613900" }, { "database": "PubMed", "id": "23629676", "url": "https://pubmed.ncbi.nlm.nih.gov/23629676" }, { "database": "PubMed", "id": "24066087", "url": "https://pubmed.ncbi.nlm.nih.gov/24066087" }, { "database": "PubMed", "id": "24205378", "url": "https://pubmed.ncbi.nlm.nih.gov/24205378" }, { "database": "PubMed", "id": "25140833", "url": "https://pubmed.ncbi.nlm.nih.gov/25140833" }, { "database": "PubMed", "id": "25252913", "url": "https://pubmed.ncbi.nlm.nih.gov/25252913" }, { "database": "PubMed", "id": "25717186", "url": "https://pubmed.ncbi.nlm.nih.gov/25717186" }, { "database": "PubMed", "id": "25734483", "url": "https://pubmed.ncbi.nlm.nih.gov/25734483" }, { "database": "PubMed", "id": "25870599", "url": "https://pubmed.ncbi.nlm.nih.gov/25870599" }, { "database": "PubMed", "id": "25916191", "url": "https://pubmed.ncbi.nlm.nih.gov/25916191" }, { "database": "PubMed", "id": "26295810", "url": "https://pubmed.ncbi.nlm.nih.gov/26295810" }, { "database": "PubMed", "id": "27764189", "url": "https://pubmed.ncbi.nlm.nih.gov/27764189" }, { "database": "PubMed", "id": "27995987", "url": "https://pubmed.ncbi.nlm.nih.gov/27995987" }, { "database": "PubMed", "id": "28798148", "url": "https://pubmed.ncbi.nlm.nih.gov/28798148" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" }, { "database": "PubMed", "id": "29066806", "url": "https://pubmed.ncbi.nlm.nih.gov/29066806" }, { "database": "PubMed", "id": "29743977", "url": "https://pubmed.ncbi.nlm.nih.gov/29743977" }, { "database": "PubMed", "id": "29972810", "url": "https://pubmed.ncbi.nlm.nih.gov/29972810" }, { "database": "PubMed", "id": "30873169", "url": "https://pubmed.ncbi.nlm.nih.gov/30873169" }, { "database": "PubMed", "id": "35367415", "url": "https://pubmed.ncbi.nlm.nih.gov/35367415" }, { "database": "PubMed", "id": "9716455", "url": "https://pubmed.ncbi.nlm.nih.gov/9716455" }, { "database": "PubMed", "id": "15215251", "url": "https://pubmed.ncbi.nlm.nih.gov/15215251" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "PubMed", "id": "11564877", "url": "https://pubmed.ncbi.nlm.nih.gov/11564877" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.23629676", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "In silico modeling of Itk activation kinetics in thymocytes suggests competing positive and negative IP4 mediated feedbacks increase robustness.", "journal": "PloS one", "date": "2013", "authors": "Mukherjee Sayak, Rigaud Stephanie, Seok Sang-Cheol, Fu Guo, Prochenka Agnieszka, Dworkin Michael, Gascoigne Nicholas R J, Vieland Veronica J, Sauer Karsten, Das Jayajit", "reference": { "type": "PubMed", "id": "24066087", "url": "https://pubmed.ncbi.nlm.nih.gov/24066087" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 783, "end_pos": 783, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by ITK, SYK and TXK", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16497976", "url": "https://pubmed.ncbi.nlm.nih.gov/16497976" }, { "database": "PubMed", "id": "1689310", "url": "https://pubmed.ncbi.nlm.nih.gov/1689310" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "7682059", "url": "https://pubmed.ncbi.nlm.nih.gov/7682059" }, { "database": "PubMed", "id": "8657103", "url": "https://pubmed.ncbi.nlm.nih.gov/8657103" }, { "database": "PubMed", "id": "8885868", "url": "https://pubmed.ncbi.nlm.nih.gov/8885868" }, { "database": "PRO", "id": "P19174", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P19174" }, { "database": "PubMed", "id": "14568990", "url": "https://pubmed.ncbi.nlm.nih.gov/14568990" }, { "database": "PubMed", "id": "15623534", "url": "https://pubmed.ncbi.nlm.nih.gov/15623534" }, { "database": "PubMed", "id": "15764700", "url": "https://pubmed.ncbi.nlm.nih.gov/15764700" }, { "database": "PubMed", "id": "16038803", "url": "https://pubmed.ncbi.nlm.nih.gov/16038803" }, { "database": "PubMed", "id": "16081816", "url": "https://pubmed.ncbi.nlm.nih.gov/16081816" }, { "database": "PubMed", "id": "16467851", "url": "https://pubmed.ncbi.nlm.nih.gov/16467851" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "17116690", "url": "https://pubmed.ncbi.nlm.nih.gov/17116690" }, { "database": "PubMed", "id": "17148460", "url": "https://pubmed.ncbi.nlm.nih.gov/17148460" }, { "database": "PubMed", "id": "17220479", "url": "https://pubmed.ncbi.nlm.nih.gov/17220479" }, { "database": "PubMed", "id": "19179337", "url": "https://pubmed.ncbi.nlm.nih.gov/19179337" }, { "database": "PubMed", "id": "21760611", "url": "https://pubmed.ncbi.nlm.nih.gov/21760611" }, { "database": "PubMed", "id": "22649724", "url": "https://pubmed.ncbi.nlm.nih.gov/22649724" }, { "database": "PubMed", "id": "22665519", "url": "https://pubmed.ncbi.nlm.nih.gov/22665519" }, { "database": "PubMed", "id": "22745786", "url": "https://pubmed.ncbi.nlm.nih.gov/22745786" }, { "database": "PubMed", "id": "23028325", "url": "https://pubmed.ncbi.nlm.nih.gov/23028325" }, { "database": "PubMed", "id": "23063561", "url": "https://pubmed.ncbi.nlm.nih.gov/23063561" }, { "database": "PubMed", "id": "23613900", "url": "https://pubmed.ncbi.nlm.nih.gov/23613900" }, { "database": "PubMed", "id": "23629676", "url": "https://pubmed.ncbi.nlm.nih.gov/23629676" }, { "database": "PubMed", "id": "24066087", "url": "https://pubmed.ncbi.nlm.nih.gov/24066087" }, { "database": "PubMed", "id": "24205378", "url": "https://pubmed.ncbi.nlm.nih.gov/24205378" }, { "database": "PubMed", "id": "25140833", "url": "https://pubmed.ncbi.nlm.nih.gov/25140833" }, { "database": "PubMed", "id": "25252913", "url": "https://pubmed.ncbi.nlm.nih.gov/25252913" }, { "database": "PubMed", "id": "25717186", "url": "https://pubmed.ncbi.nlm.nih.gov/25717186" }, { "database": "PubMed", "id": "25734483", "url": "https://pubmed.ncbi.nlm.nih.gov/25734483" }, { "database": "PubMed", "id": "25870599", "url": "https://pubmed.ncbi.nlm.nih.gov/25870599" }, { "database": "PubMed", "id": "25916191", "url": "https://pubmed.ncbi.nlm.nih.gov/25916191" }, { "database": "PubMed", "id": "26295810", "url": "https://pubmed.ncbi.nlm.nih.gov/26295810" }, { "database": "PubMed", "id": "27764189", "url": "https://pubmed.ncbi.nlm.nih.gov/27764189" }, { "database": "PubMed", "id": "27995987", "url": "https://pubmed.ncbi.nlm.nih.gov/27995987" }, { "database": "PubMed", "id": "28798148", "url": "https://pubmed.ncbi.nlm.nih.gov/28798148" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" }, { "database": "PubMed", "id": "29066806", "url": "https://pubmed.ncbi.nlm.nih.gov/29066806" }, { "database": "PubMed", "id": "29743977", "url": "https://pubmed.ncbi.nlm.nih.gov/29743977" }, { "database": "PubMed", "id": "29972810", "url": "https://pubmed.ncbi.nlm.nih.gov/29972810" }, { "database": "PubMed", "id": "30873169", "url": "https://pubmed.ncbi.nlm.nih.gov/30873169" }, { "database": "PubMed", "id": "35367415", "url": "https://pubmed.ncbi.nlm.nih.gov/35367415" }, { "database": "PubMed", "id": "9716455", "url": "https://pubmed.ncbi.nlm.nih.gov/9716455" }, { "database": "PubMed", "id": "15215251", "url": "https://pubmed.ncbi.nlm.nih.gov/15215251" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "PubMed", "id": "11564877", "url": "https://pubmed.ncbi.nlm.nih.gov/11564877" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.24066087", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A quantitative assessment of costimulation and phosphatase activity on microclusters in early T cell signaling.", "journal": "PloS one", "date": "2013", "authors": "Witsenburg J Joris, Glauner Heike, M\u00fcller J\u00f6rg P, Groenewoud Johannes M M, Roth G\u00fcnter, B\u00f6hmer Frank-Dietmar, Adjobo-Hermans Merel J W, Brock Roland", "reference": { "type": "PubMed", "id": "24205378", "url": "https://pubmed.ncbi.nlm.nih.gov/24205378" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 783, "end_pos": 783, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by ITK, SYK and TXK", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16497976", "url": "https://pubmed.ncbi.nlm.nih.gov/16497976" }, { "database": "PubMed", "id": "1689310", "url": "https://pubmed.ncbi.nlm.nih.gov/1689310" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "7682059", "url": "https://pubmed.ncbi.nlm.nih.gov/7682059" }, { "database": "PubMed", "id": "8657103", "url": "https://pubmed.ncbi.nlm.nih.gov/8657103" }, { "database": "PubMed", "id": "8885868", "url": "https://pubmed.ncbi.nlm.nih.gov/8885868" }, { "database": "PRO", "id": "P19174", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P19174" }, { "database": "PubMed", "id": "14568990", "url": "https://pubmed.ncbi.nlm.nih.gov/14568990" }, { "database": "PubMed", "id": "15623534", "url": "https://pubmed.ncbi.nlm.nih.gov/15623534" }, { "database": "PubMed", "id": "15764700", "url": "https://pubmed.ncbi.nlm.nih.gov/15764700" }, { "database": "PubMed", "id": "16038803", "url": "https://pubmed.ncbi.nlm.nih.gov/16038803" }, { "database": "PubMed", "id": "16081816", "url": "https://pubmed.ncbi.nlm.nih.gov/16081816" }, { "database": "PubMed", "id": "16467851", "url": "https://pubmed.ncbi.nlm.nih.gov/16467851" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "17116690", "url": "https://pubmed.ncbi.nlm.nih.gov/17116690" }, { "database": "PubMed", "id": "17148460", "url": "https://pubmed.ncbi.nlm.nih.gov/17148460" }, { "database": "PubMed", "id": "17220479", "url": "https://pubmed.ncbi.nlm.nih.gov/17220479" }, { "database": "PubMed", "id": "19179337", "url": "https://pubmed.ncbi.nlm.nih.gov/19179337" }, { "database": "PubMed", "id": "21760611", "url": "https://pubmed.ncbi.nlm.nih.gov/21760611" }, { "database": "PubMed", "id": "22649724", "url": "https://pubmed.ncbi.nlm.nih.gov/22649724" }, { "database": "PubMed", "id": "22665519", "url": "https://pubmed.ncbi.nlm.nih.gov/22665519" }, { "database": "PubMed", "id": "22745786", "url": "https://pubmed.ncbi.nlm.nih.gov/22745786" }, { "database": "PubMed", "id": "23028325", "url": "https://pubmed.ncbi.nlm.nih.gov/23028325" }, { "database": "PubMed", "id": "23063561", "url": "https://pubmed.ncbi.nlm.nih.gov/23063561" }, { "database": "PubMed", "id": "23613900", "url": "https://pubmed.ncbi.nlm.nih.gov/23613900" }, { "database": "PubMed", "id": "23629676", "url": "https://pubmed.ncbi.nlm.nih.gov/23629676" }, { "database": "PubMed", "id": "24066087", "url": "https://pubmed.ncbi.nlm.nih.gov/24066087" }, { "database": "PubMed", "id": "24205378", "url": "https://pubmed.ncbi.nlm.nih.gov/24205378" }, { "database": "PubMed", "id": "25140833", "url": "https://pubmed.ncbi.nlm.nih.gov/25140833" }, { "database": "PubMed", "id": "25252913", "url": "https://pubmed.ncbi.nlm.nih.gov/25252913" }, { "database": "PubMed", "id": "25717186", "url": "https://pubmed.ncbi.nlm.nih.gov/25717186" }, { "database": "PubMed", "id": "25734483", "url": "https://pubmed.ncbi.nlm.nih.gov/25734483" }, { "database": "PubMed", "id": "25870599", "url": "https://pubmed.ncbi.nlm.nih.gov/25870599" }, { "database": "PubMed", "id": "25916191", "url": "https://pubmed.ncbi.nlm.nih.gov/25916191" }, { "database": "PubMed", "id": "26295810", "url": "https://pubmed.ncbi.nlm.nih.gov/26295810" }, { "database": "PubMed", "id": "27764189", "url": "https://pubmed.ncbi.nlm.nih.gov/27764189" }, { "database": "PubMed", "id": "27995987", "url": "https://pubmed.ncbi.nlm.nih.gov/27995987" }, { "database": "PubMed", "id": "28798148", "url": "https://pubmed.ncbi.nlm.nih.gov/28798148" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" }, { "database": "PubMed", "id": "29066806", "url": "https://pubmed.ncbi.nlm.nih.gov/29066806" }, { "database": "PubMed", "id": "29743977", "url": "https://pubmed.ncbi.nlm.nih.gov/29743977" }, { "database": "PubMed", "id": "29972810", "url": "https://pubmed.ncbi.nlm.nih.gov/29972810" }, { "database": "PubMed", "id": "30873169", "url": "https://pubmed.ncbi.nlm.nih.gov/30873169" }, { "database": "PubMed", "id": "35367415", "url": "https://pubmed.ncbi.nlm.nih.gov/35367415" }, { "database": "PubMed", "id": "9716455", "url": "https://pubmed.ncbi.nlm.nih.gov/9716455" }, { "database": "PubMed", "id": "15215251", "url": "https://pubmed.ncbi.nlm.nih.gov/15215251" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "PubMed", "id": "11564877", "url": "https://pubmed.ncbi.nlm.nih.gov/11564877" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.24205378", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "c-CBL E3 ubiquitin ligase is overexpressed in cutaneous T-cell lymphoma: its inhibition promotes activation-induced cell death.", "journal": "The Journal of investigative dermatology", "date": "2015", "authors": "Wu J, Salva KA, Wood GS", "reference": { "type": "PubMed", "id": "25140833", "url": "https://pubmed.ncbi.nlm.nih.gov/25140833" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 783, "end_pos": 783, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by ITK, SYK and TXK", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16497976", "url": "https://pubmed.ncbi.nlm.nih.gov/16497976" }, { "database": "PubMed", "id": "1689310", "url": "https://pubmed.ncbi.nlm.nih.gov/1689310" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "7682059", "url": "https://pubmed.ncbi.nlm.nih.gov/7682059" }, { "database": "PubMed", "id": "8657103", "url": "https://pubmed.ncbi.nlm.nih.gov/8657103" }, { "database": "PubMed", "id": "8885868", "url": "https://pubmed.ncbi.nlm.nih.gov/8885868" }, { "database": "PRO", "id": "P19174", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P19174" }, { "database": "PubMed", "id": "14568990", "url": "https://pubmed.ncbi.nlm.nih.gov/14568990" }, { "database": "PubMed", "id": "15623534", "url": "https://pubmed.ncbi.nlm.nih.gov/15623534" }, { "database": "PubMed", "id": "15764700", "url": "https://pubmed.ncbi.nlm.nih.gov/15764700" }, { "database": "PubMed", "id": "16038803", "url": "https://pubmed.ncbi.nlm.nih.gov/16038803" }, { "database": "PubMed", "id": "16081816", "url": "https://pubmed.ncbi.nlm.nih.gov/16081816" }, { "database": "PubMed", "id": "16467851", "url": "https://pubmed.ncbi.nlm.nih.gov/16467851" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "17116690", "url": "https://pubmed.ncbi.nlm.nih.gov/17116690" }, { "database": "PubMed", "id": "17148460", "url": "https://pubmed.ncbi.nlm.nih.gov/17148460" }, { "database": "PubMed", "id": "17220479", "url": "https://pubmed.ncbi.nlm.nih.gov/17220479" }, { "database": "PubMed", "id": "19179337", "url": "https://pubmed.ncbi.nlm.nih.gov/19179337" }, { "database": "PubMed", "id": "21760611", "url": "https://pubmed.ncbi.nlm.nih.gov/21760611" }, { "database": "PubMed", "id": "22649724", "url": "https://pubmed.ncbi.nlm.nih.gov/22649724" }, { "database": "PubMed", "id": "22665519", "url": "https://pubmed.ncbi.nlm.nih.gov/22665519" }, { "database": "PubMed", "id": "22745786", "url": "https://pubmed.ncbi.nlm.nih.gov/22745786" }, { "database": "PubMed", "id": "23028325", "url": "https://pubmed.ncbi.nlm.nih.gov/23028325" }, { "database": "PubMed", "id": "23063561", "url": "https://pubmed.ncbi.nlm.nih.gov/23063561" }, { "database": "PubMed", "id": "23613900", "url": "https://pubmed.ncbi.nlm.nih.gov/23613900" }, { "database": "PubMed", "id": "23629676", "url": "https://pubmed.ncbi.nlm.nih.gov/23629676" }, { "database": "PubMed", "id": "24066087", "url": "https://pubmed.ncbi.nlm.nih.gov/24066087" }, { "database": "PubMed", "id": "24205378", "url": "https://pubmed.ncbi.nlm.nih.gov/24205378" }, { "database": "PubMed", "id": "25140833", "url": "https://pubmed.ncbi.nlm.nih.gov/25140833" }, { "database": "PubMed", "id": "25252913", "url": "https://pubmed.ncbi.nlm.nih.gov/25252913" }, { "database": "PubMed", "id": "25717186", "url": "https://pubmed.ncbi.nlm.nih.gov/25717186" }, { "database": "PubMed", "id": "25734483", "url": "https://pubmed.ncbi.nlm.nih.gov/25734483" }, { "database": "PubMed", "id": "25870599", "url": "https://pubmed.ncbi.nlm.nih.gov/25870599" }, { "database": "PubMed", "id": "25916191", "url": "https://pubmed.ncbi.nlm.nih.gov/25916191" }, { "database": "PubMed", "id": "26295810", "url": "https://pubmed.ncbi.nlm.nih.gov/26295810" }, { "database": "PubMed", "id": "27764189", "url": "https://pubmed.ncbi.nlm.nih.gov/27764189" }, { "database": "PubMed", "id": "27995987", "url": "https://pubmed.ncbi.nlm.nih.gov/27995987" }, { "database": "PubMed", "id": "28798148", "url": "https://pubmed.ncbi.nlm.nih.gov/28798148" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" }, { "database": "PubMed", "id": "29066806", "url": "https://pubmed.ncbi.nlm.nih.gov/29066806" }, { "database": "PubMed", "id": "29743977", "url": "https://pubmed.ncbi.nlm.nih.gov/29743977" }, { "database": "PubMed", "id": "29972810", "url": "https://pubmed.ncbi.nlm.nih.gov/29972810" }, { "database": "PubMed", "id": "30873169", "url": "https://pubmed.ncbi.nlm.nih.gov/30873169" }, { "database": "PubMed", "id": "35367415", "url": "https://pubmed.ncbi.nlm.nih.gov/35367415" }, { "database": "PubMed", "id": "9716455", "url": "https://pubmed.ncbi.nlm.nih.gov/9716455" }, { "database": "PubMed", "id": "15215251", "url": "https://pubmed.ncbi.nlm.nih.gov/15215251" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "PubMed", "id": "11564877", "url": "https://pubmed.ncbi.nlm.nih.gov/11564877" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.25140833", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A recurrent activating PLCG1 mutation in cardiac angiosarcomas increases apoptosis resistance and invasiveness of endothelial cells.", "journal": "Cancer research", "date": "2014-11-01", "authors": "Kunze Kristin, Spieker Tilmann, Gamerdinger Ulrike, Nau Kerstin, Berger Johannes, Dreyer Thomas, Sindermann J\u00fcrgen R, Hoffmeier Andreas, Gattenl\u00f6hner Stefan, Br\u00e4uninger Andreas", "reference": { "type": "PubMed", "id": "25252913", "url": "https://pubmed.ncbi.nlm.nih.gov/25252913" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 783, "end_pos": 783, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by ITK, SYK and TXK", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16497976", "url": "https://pubmed.ncbi.nlm.nih.gov/16497976" }, { "database": "PubMed", "id": "1689310", "url": "https://pubmed.ncbi.nlm.nih.gov/1689310" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "7682059", "url": "https://pubmed.ncbi.nlm.nih.gov/7682059" }, { "database": "PubMed", "id": "8657103", "url": "https://pubmed.ncbi.nlm.nih.gov/8657103" }, { "database": "PubMed", "id": "8885868", "url": "https://pubmed.ncbi.nlm.nih.gov/8885868" }, { "database": "PRO", "id": "P19174", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P19174" }, { "database": "PubMed", "id": "14568990", "url": "https://pubmed.ncbi.nlm.nih.gov/14568990" }, { "database": "PubMed", "id": "15623534", "url": "https://pubmed.ncbi.nlm.nih.gov/15623534" }, { "database": "PubMed", "id": "15764700", "url": "https://pubmed.ncbi.nlm.nih.gov/15764700" }, { "database": "PubMed", "id": "16038803", "url": "https://pubmed.ncbi.nlm.nih.gov/16038803" }, { "database": "PubMed", "id": "16081816", "url": "https://pubmed.ncbi.nlm.nih.gov/16081816" }, { "database": "PubMed", "id": "16467851", "url": "https://pubmed.ncbi.nlm.nih.gov/16467851" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "17116690", "url": "https://pubmed.ncbi.nlm.nih.gov/17116690" }, { "database": "PubMed", "id": "17148460", "url": "https://pubmed.ncbi.nlm.nih.gov/17148460" }, { "database": "PubMed", "id": "17220479", "url": "https://pubmed.ncbi.nlm.nih.gov/17220479" }, { "database": "PubMed", "id": "19179337", "url": "https://pubmed.ncbi.nlm.nih.gov/19179337" }, { "database": "PubMed", "id": "21760611", "url": "https://pubmed.ncbi.nlm.nih.gov/21760611" }, { "database": "PubMed", "id": "22649724", "url": "https://pubmed.ncbi.nlm.nih.gov/22649724" }, { "database": "PubMed", "id": "22665519", "url": "https://pubmed.ncbi.nlm.nih.gov/22665519" }, { "database": "PubMed", "id": "22745786", "url": "https://pubmed.ncbi.nlm.nih.gov/22745786" }, { "database": "PubMed", "id": "23028325", "url": "https://pubmed.ncbi.nlm.nih.gov/23028325" }, { "database": "PubMed", "id": "23063561", "url": "https://pubmed.ncbi.nlm.nih.gov/23063561" }, { "database": "PubMed", "id": "23613900", "url": "https://pubmed.ncbi.nlm.nih.gov/23613900" }, { "database": "PubMed", "id": "23629676", "url": "https://pubmed.ncbi.nlm.nih.gov/23629676" }, { "database": "PubMed", "id": "24066087", "url": "https://pubmed.ncbi.nlm.nih.gov/24066087" }, { "database": "PubMed", "id": "24205378", "url": "https://pubmed.ncbi.nlm.nih.gov/24205378" }, { "database": "PubMed", "id": "25140833", "url": "https://pubmed.ncbi.nlm.nih.gov/25140833" }, { "database": "PubMed", "id": "25252913", "url": "https://pubmed.ncbi.nlm.nih.gov/25252913" }, { "database": "PubMed", "id": "25717186", "url": "https://pubmed.ncbi.nlm.nih.gov/25717186" }, { "database": "PubMed", "id": "25734483", "url": "https://pubmed.ncbi.nlm.nih.gov/25734483" }, { "database": "PubMed", "id": "25870599", "url": "https://pubmed.ncbi.nlm.nih.gov/25870599" }, { "database": "PubMed", "id": "25916191", "url": "https://pubmed.ncbi.nlm.nih.gov/25916191" }, { "database": "PubMed", "id": "26295810", "url": "https://pubmed.ncbi.nlm.nih.gov/26295810" }, { "database": "PubMed", "id": "27764189", "url": "https://pubmed.ncbi.nlm.nih.gov/27764189" }, { "database": "PubMed", "id": "27995987", "url": "https://pubmed.ncbi.nlm.nih.gov/27995987" }, { "database": "PubMed", "id": "28798148", "url": "https://pubmed.ncbi.nlm.nih.gov/28798148" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" }, { "database": "PubMed", "id": "29066806", "url": "https://pubmed.ncbi.nlm.nih.gov/29066806" }, { "database": "PubMed", "id": "29743977", "url": "https://pubmed.ncbi.nlm.nih.gov/29743977" }, { "database": "PubMed", "id": "29972810", "url": "https://pubmed.ncbi.nlm.nih.gov/29972810" }, { "database": "PubMed", "id": "30873169", "url": "https://pubmed.ncbi.nlm.nih.gov/30873169" }, { "database": "PubMed", "id": "35367415", "url": "https://pubmed.ncbi.nlm.nih.gov/35367415" }, { "database": "PubMed", "id": "9716455", "url": "https://pubmed.ncbi.nlm.nih.gov/9716455" }, { "database": "PubMed", "id": "15215251", "url": "https://pubmed.ncbi.nlm.nih.gov/15215251" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "PubMed", "id": "11564877", "url": "https://pubmed.ncbi.nlm.nih.gov/11564877" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.25252913", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "CD47 agonist peptides induce programmed cell death in refractory chronic lymphocytic leukemia B cells via PLC\u03b31 activation: evidence from mice and humans.", "journal": "PLoS medicine", "date": "2015-03", "authors": "Martinez-Torres Ana-Carolina, Quiney Claire, Attout Tarik, Boullet Helo\u00efse, Herbi Linda, Vela Laura, Barbier Sandrine, Chateau Danielle, Chapiro Elise, Nguyen-Khac Florence, Davi Fr\u00e9d\u00e9ric, Le Garff-Tavernier Magali, Moumn\u00e9 Roba, Sarfati Marika, Karoyan Philippe, Merle-B\u00e9ral H\u00e9l\u00e8ne, Launay Pierre, Susin Santos A", "reference": { "type": "PubMed", "id": "25734483", "url": "https://pubmed.ncbi.nlm.nih.gov/25734483" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 783, "end_pos": 783, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by ITK, SYK and TXK", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16497976", "url": "https://pubmed.ncbi.nlm.nih.gov/16497976" }, { "database": "PubMed", "id": "1689310", "url": "https://pubmed.ncbi.nlm.nih.gov/1689310" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "7682059", "url": "https://pubmed.ncbi.nlm.nih.gov/7682059" }, { "database": "PubMed", "id": "8657103", "url": "https://pubmed.ncbi.nlm.nih.gov/8657103" }, { "database": "PubMed", "id": "8885868", "url": "https://pubmed.ncbi.nlm.nih.gov/8885868" }, { "database": "PRO", "id": "P19174", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P19174" }, { "database": "PubMed", "id": "14568990", "url": "https://pubmed.ncbi.nlm.nih.gov/14568990" }, { "database": "PubMed", "id": "15623534", "url": "https://pubmed.ncbi.nlm.nih.gov/15623534" }, { "database": "PubMed", "id": "15764700", "url": "https://pubmed.ncbi.nlm.nih.gov/15764700" }, { "database": "PubMed", "id": "16038803", "url": "https://pubmed.ncbi.nlm.nih.gov/16038803" }, { "database": "PubMed", "id": "16081816", "url": "https://pubmed.ncbi.nlm.nih.gov/16081816" }, { "database": "PubMed", "id": "16467851", "url": "https://pubmed.ncbi.nlm.nih.gov/16467851" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "17116690", "url": "https://pubmed.ncbi.nlm.nih.gov/17116690" }, { "database": "PubMed", "id": "17148460", "url": "https://pubmed.ncbi.nlm.nih.gov/17148460" }, { "database": "PubMed", "id": "17220479", "url": "https://pubmed.ncbi.nlm.nih.gov/17220479" }, { "database": "PubMed", "id": "19179337", "url": "https://pubmed.ncbi.nlm.nih.gov/19179337" }, { "database": "PubMed", "id": "21760611", "url": "https://pubmed.ncbi.nlm.nih.gov/21760611" }, { "database": "PubMed", "id": "22649724", "url": "https://pubmed.ncbi.nlm.nih.gov/22649724" }, { "database": "PubMed", "id": "22665519", "url": "https://pubmed.ncbi.nlm.nih.gov/22665519" }, { "database": "PubMed", "id": "22745786", "url": "https://pubmed.ncbi.nlm.nih.gov/22745786" }, { "database": "PubMed", "id": "23028325", "url": "https://pubmed.ncbi.nlm.nih.gov/23028325" }, { "database": "PubMed", "id": "23063561", "url": "https://pubmed.ncbi.nlm.nih.gov/23063561" }, { "database": "PubMed", "id": "23613900", "url": "https://pubmed.ncbi.nlm.nih.gov/23613900" }, { "database": "PubMed", "id": "23629676", "url": "https://pubmed.ncbi.nlm.nih.gov/23629676" }, { "database": "PubMed", "id": "24066087", "url": "https://pubmed.ncbi.nlm.nih.gov/24066087" }, { "database": "PubMed", "id": "24205378", "url": "https://pubmed.ncbi.nlm.nih.gov/24205378" }, { "database": "PubMed", "id": "25140833", "url": "https://pubmed.ncbi.nlm.nih.gov/25140833" }, { "database": "PubMed", "id": "25252913", "url": "https://pubmed.ncbi.nlm.nih.gov/25252913" }, { "database": "PubMed", "id": "25717186", "url": "https://pubmed.ncbi.nlm.nih.gov/25717186" }, { "database": "PubMed", "id": "25734483", "url": "https://pubmed.ncbi.nlm.nih.gov/25734483" }, { "database": "PubMed", "id": "25870599", "url": "https://pubmed.ncbi.nlm.nih.gov/25870599" }, { "database": "PubMed", "id": "25916191", "url": "https://pubmed.ncbi.nlm.nih.gov/25916191" }, { "database": "PubMed", "id": "26295810", "url": "https://pubmed.ncbi.nlm.nih.gov/26295810" }, { "database": "PubMed", "id": "27764189", "url": "https://pubmed.ncbi.nlm.nih.gov/27764189" }, { "database": "PubMed", "id": "27995987", "url": "https://pubmed.ncbi.nlm.nih.gov/27995987" }, { "database": "PubMed", "id": "28798148", "url": "https://pubmed.ncbi.nlm.nih.gov/28798148" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" }, { "database": "PubMed", "id": "29066806", "url": "https://pubmed.ncbi.nlm.nih.gov/29066806" }, { "database": "PubMed", "id": "29743977", "url": "https://pubmed.ncbi.nlm.nih.gov/29743977" }, { "database": "PubMed", "id": "29972810", "url": "https://pubmed.ncbi.nlm.nih.gov/29972810" }, { "database": "PubMed", "id": "30873169", "url": "https://pubmed.ncbi.nlm.nih.gov/30873169" }, { "database": "PubMed", "id": "35367415", "url": "https://pubmed.ncbi.nlm.nih.gov/35367415" }, { "database": "PubMed", "id": "9716455", "url": "https://pubmed.ncbi.nlm.nih.gov/9716455" }, { "database": "PubMed", "id": "15215251", "url": "https://pubmed.ncbi.nlm.nih.gov/15215251" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "PubMed", "id": "11564877", "url": "https://pubmed.ncbi.nlm.nih.gov/11564877" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.25734483", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "GRB2 Nucleates T Cell Receptor-Mediated LAT Clusters That Control PLC-\u03b31 Activation and Cytokine Production.", "journal": "Frontiers in immunology", "date": "2015", "authors": "Bilal Mahmood Yousif, Houtman Jon C D", "reference": { "type": "PubMed", "id": "25870599", "url": "https://pubmed.ncbi.nlm.nih.gov/25870599" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62993-1", "protein_name": "Growth factor receptor-bound protein 2", "gene_name": "GRB2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 783, "end_pos": 783, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by ITK, SYK and TXK", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16497976", "url": "https://pubmed.ncbi.nlm.nih.gov/16497976" }, { "database": "PubMed", "id": "1689310", "url": "https://pubmed.ncbi.nlm.nih.gov/1689310" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "7682059", "url": "https://pubmed.ncbi.nlm.nih.gov/7682059" }, { "database": "PubMed", "id": "8657103", "url": "https://pubmed.ncbi.nlm.nih.gov/8657103" }, { "database": "PubMed", "id": "8885868", "url": "https://pubmed.ncbi.nlm.nih.gov/8885868" }, { "database": "PRO", "id": "P19174", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P19174" }, { "database": "PubMed", "id": "14568990", "url": "https://pubmed.ncbi.nlm.nih.gov/14568990" }, { "database": "PubMed", "id": "15623534", "url": "https://pubmed.ncbi.nlm.nih.gov/15623534" }, { "database": "PubMed", "id": "15764700", "url": "https://pubmed.ncbi.nlm.nih.gov/15764700" }, { "database": "PubMed", "id": "16038803", "url": "https://pubmed.ncbi.nlm.nih.gov/16038803" }, { "database": "PubMed", "id": "16081816", "url": "https://pubmed.ncbi.nlm.nih.gov/16081816" }, { "database": "PubMed", "id": "16467851", "url": "https://pubmed.ncbi.nlm.nih.gov/16467851" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "17116690", "url": "https://pubmed.ncbi.nlm.nih.gov/17116690" }, { "database": "PubMed", "id": "17148460", "url": "https://pubmed.ncbi.nlm.nih.gov/17148460" }, { "database": "PubMed", "id": "17220479", "url": "https://pubmed.ncbi.nlm.nih.gov/17220479" }, { "database": "PubMed", "id": "19179337", "url": "https://pubmed.ncbi.nlm.nih.gov/19179337" }, { "database": "PubMed", "id": "21760611", "url": "https://pubmed.ncbi.nlm.nih.gov/21760611" }, { "database": "PubMed", "id": "22649724", "url": "https://pubmed.ncbi.nlm.nih.gov/22649724" }, { "database": "PubMed", "id": "22665519", "url": "https://pubmed.ncbi.nlm.nih.gov/22665519" }, { "database": "PubMed", "id": "22745786", "url": "https://pubmed.ncbi.nlm.nih.gov/22745786" }, { "database": "PubMed", "id": "23028325", "url": "https://pubmed.ncbi.nlm.nih.gov/23028325" }, { "database": "PubMed", "id": "23063561", "url": "https://pubmed.ncbi.nlm.nih.gov/23063561" }, { "database": "PubMed", "id": "23613900", "url": "https://pubmed.ncbi.nlm.nih.gov/23613900" }, { "database": "PubMed", "id": "23629676", "url": "https://pubmed.ncbi.nlm.nih.gov/23629676" }, { "database": "PubMed", "id": "24066087", "url": "https://pubmed.ncbi.nlm.nih.gov/24066087" }, { "database": "PubMed", "id": "24205378", "url": "https://pubmed.ncbi.nlm.nih.gov/24205378" }, { "database": "PubMed", "id": "25140833", "url": "https://pubmed.ncbi.nlm.nih.gov/25140833" }, { "database": "PubMed", "id": "25252913", "url": "https://pubmed.ncbi.nlm.nih.gov/25252913" }, { "database": "PubMed", "id": "25717186", "url": "https://pubmed.ncbi.nlm.nih.gov/25717186" }, { "database": "PubMed", "id": "25734483", "url": "https://pubmed.ncbi.nlm.nih.gov/25734483" }, { "database": "PubMed", "id": "25870599", "url": "https://pubmed.ncbi.nlm.nih.gov/25870599" }, { "database": "PubMed", "id": "25916191", "url": "https://pubmed.ncbi.nlm.nih.gov/25916191" }, { "database": "PubMed", "id": "26295810", "url": "https://pubmed.ncbi.nlm.nih.gov/26295810" }, { "database": "PubMed", "id": "27764189", "url": "https://pubmed.ncbi.nlm.nih.gov/27764189" }, { "database": "PubMed", "id": "27995987", "url": "https://pubmed.ncbi.nlm.nih.gov/27995987" }, { "database": "PubMed", "id": "28798148", "url": "https://pubmed.ncbi.nlm.nih.gov/28798148" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" }, { "database": "PubMed", "id": "29066806", "url": "https://pubmed.ncbi.nlm.nih.gov/29066806" }, { "database": "PubMed", "id": "29743977", "url": "https://pubmed.ncbi.nlm.nih.gov/29743977" }, { "database": "PubMed", "id": "29972810", "url": "https://pubmed.ncbi.nlm.nih.gov/29972810" }, { "database": "PubMed", "id": "30873169", "url": "https://pubmed.ncbi.nlm.nih.gov/30873169" }, { "database": "PubMed", "id": "35367415", "url": "https://pubmed.ncbi.nlm.nih.gov/35367415" }, { "database": "PubMed", "id": "9716455", "url": "https://pubmed.ncbi.nlm.nih.gov/9716455" }, { "database": "PubMed", "id": "15215251", "url": "https://pubmed.ncbi.nlm.nih.gov/15215251" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "PubMed", "id": "11564877", "url": "https://pubmed.ncbi.nlm.nih.gov/11564877" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.25870599", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Scaffold Protein SLP-76 Primes PLCgamma1 for Activation by ITK-Mediated Phosphorylation.", "journal": "Journal of molecular biology", "date": "2015", "authors": "Devkota S, Joseph RE, Min L, Bruce Fulton D, Andreotti AH", "reference": { "type": "PubMed", "id": "25916191", "url": "https://pubmed.ncbi.nlm.nih.gov/25916191" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 783, "end_pos": 783, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by ITK, SYK and TXK", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16497976", "url": "https://pubmed.ncbi.nlm.nih.gov/16497976" }, { "database": "PubMed", "id": "1689310", "url": "https://pubmed.ncbi.nlm.nih.gov/1689310" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "7682059", "url": "https://pubmed.ncbi.nlm.nih.gov/7682059" }, { "database": "PubMed", "id": "8657103", "url": "https://pubmed.ncbi.nlm.nih.gov/8657103" }, { "database": "PubMed", "id": "8885868", "url": "https://pubmed.ncbi.nlm.nih.gov/8885868" }, { "database": "PRO", "id": "P19174", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P19174" }, { "database": "PubMed", "id": "14568990", "url": "https://pubmed.ncbi.nlm.nih.gov/14568990" }, { "database": "PubMed", "id": "15623534", "url": "https://pubmed.ncbi.nlm.nih.gov/15623534" }, { "database": "PubMed", "id": "15764700", "url": "https://pubmed.ncbi.nlm.nih.gov/15764700" }, { "database": "PubMed", "id": "16038803", "url": "https://pubmed.ncbi.nlm.nih.gov/16038803" }, { "database": "PubMed", "id": "16081816", "url": "https://pubmed.ncbi.nlm.nih.gov/16081816" }, { "database": "PubMed", "id": "16467851", "url": "https://pubmed.ncbi.nlm.nih.gov/16467851" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "17116690", "url": "https://pubmed.ncbi.nlm.nih.gov/17116690" }, { "database": "PubMed", "id": "17148460", "url": "https://pubmed.ncbi.nlm.nih.gov/17148460" }, { "database": "PubMed", "id": "17220479", "url": "https://pubmed.ncbi.nlm.nih.gov/17220479" }, { "database": "PubMed", "id": "19179337", "url": "https://pubmed.ncbi.nlm.nih.gov/19179337" }, { "database": "PubMed", "id": "21760611", "url": "https://pubmed.ncbi.nlm.nih.gov/21760611" }, { "database": "PubMed", "id": "22649724", "url": "https://pubmed.ncbi.nlm.nih.gov/22649724" }, { "database": "PubMed", "id": "22665519", "url": "https://pubmed.ncbi.nlm.nih.gov/22665519" }, { "database": "PubMed", "id": "22745786", "url": "https://pubmed.ncbi.nlm.nih.gov/22745786" }, { "database": "PubMed", "id": "23028325", "url": "https://pubmed.ncbi.nlm.nih.gov/23028325" }, { "database": "PubMed", "id": "23063561", "url": "https://pubmed.ncbi.nlm.nih.gov/23063561" }, { "database": "PubMed", "id": "23613900", "url": "https://pubmed.ncbi.nlm.nih.gov/23613900" }, { "database": "PubMed", "id": "23629676", "url": "https://pubmed.ncbi.nlm.nih.gov/23629676" }, { "database": "PubMed", "id": "24066087", "url": "https://pubmed.ncbi.nlm.nih.gov/24066087" }, { "database": "PubMed", "id": "24205378", "url": "https://pubmed.ncbi.nlm.nih.gov/24205378" }, { "database": "PubMed", "id": "25140833", "url": "https://pubmed.ncbi.nlm.nih.gov/25140833" }, { "database": "PubMed", "id": "25252913", "url": "https://pubmed.ncbi.nlm.nih.gov/25252913" }, { "database": "PubMed", "id": "25717186", "url": "https://pubmed.ncbi.nlm.nih.gov/25717186" }, { "database": "PubMed", "id": "25734483", "url": "https://pubmed.ncbi.nlm.nih.gov/25734483" }, { "database": "PubMed", "id": "25870599", "url": "https://pubmed.ncbi.nlm.nih.gov/25870599" }, { "database": "PubMed", "id": "25916191", "url": "https://pubmed.ncbi.nlm.nih.gov/25916191" }, { "database": "PubMed", "id": "26295810", "url": "https://pubmed.ncbi.nlm.nih.gov/26295810" }, { "database": "PubMed", "id": "27764189", "url": "https://pubmed.ncbi.nlm.nih.gov/27764189" }, { "database": "PubMed", "id": "27995987", "url": "https://pubmed.ncbi.nlm.nih.gov/27995987" }, { "database": "PubMed", "id": "28798148", "url": "https://pubmed.ncbi.nlm.nih.gov/28798148" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" }, { "database": "PubMed", "id": "29066806", "url": "https://pubmed.ncbi.nlm.nih.gov/29066806" }, { "database": "PubMed", "id": "29743977", "url": "https://pubmed.ncbi.nlm.nih.gov/29743977" }, { "database": "PubMed", "id": "29972810", "url": "https://pubmed.ncbi.nlm.nih.gov/29972810" }, { "database": "PubMed", "id": "30873169", "url": "https://pubmed.ncbi.nlm.nih.gov/30873169" }, { "database": "PubMed", "id": "35367415", "url": "https://pubmed.ncbi.nlm.nih.gov/35367415" }, { "database": "PubMed", "id": "9716455", "url": "https://pubmed.ncbi.nlm.nih.gov/9716455" }, { "database": "PubMed", "id": "15215251", "url": "https://pubmed.ncbi.nlm.nih.gov/15215251" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "PubMed", "id": "11564877", "url": "https://pubmed.ncbi.nlm.nih.gov/11564877" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.25916191", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Inhibiting the Recruitment of PLC\u03b31 to Kaposi's Sarcoma Herpesvirus K15 Protein Reduces the Invasiveness and Angiogenesis of Infected Endothelial Cells.", "journal": "PLoS pathogens", "date": "2015-08", "authors": "Gramolelli Silvia, Weidner-Glunde Magdalena, Abere Bizunesh, Viejo-Borbolla Abel, Bala Kiran, R\u00fcckert Jessica, Kremmer Elisabeth, Schulz Thomas F", "reference": { "type": "PubMed", "id": "26295810", "url": "https://pubmed.ncbi.nlm.nih.gov/26295810" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 783, "end_pos": 783, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by ITK, SYK and TXK", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16497976", "url": "https://pubmed.ncbi.nlm.nih.gov/16497976" }, { "database": "PubMed", "id": "1689310", "url": "https://pubmed.ncbi.nlm.nih.gov/1689310" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "7682059", "url": "https://pubmed.ncbi.nlm.nih.gov/7682059" }, { "database": "PubMed", "id": "8657103", "url": "https://pubmed.ncbi.nlm.nih.gov/8657103" }, { "database": "PubMed", "id": "8885868", "url": "https://pubmed.ncbi.nlm.nih.gov/8885868" }, { "database": "PRO", "id": "P19174", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P19174" }, { "database": "PubMed", "id": "14568990", "url": "https://pubmed.ncbi.nlm.nih.gov/14568990" }, { "database": "PubMed", "id": "15623534", "url": "https://pubmed.ncbi.nlm.nih.gov/15623534" }, { "database": "PubMed", "id": "15764700", "url": "https://pubmed.ncbi.nlm.nih.gov/15764700" }, { "database": "PubMed", "id": "16038803", "url": "https://pubmed.ncbi.nlm.nih.gov/16038803" }, { "database": "PubMed", "id": "16081816", "url": "https://pubmed.ncbi.nlm.nih.gov/16081816" }, { "database": "PubMed", "id": "16467851", "url": "https://pubmed.ncbi.nlm.nih.gov/16467851" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "17116690", "url": "https://pubmed.ncbi.nlm.nih.gov/17116690" }, { "database": "PubMed", "id": "17148460", "url": "https://pubmed.ncbi.nlm.nih.gov/17148460" }, { "database": "PubMed", "id": "17220479", "url": "https://pubmed.ncbi.nlm.nih.gov/17220479" }, { "database": "PubMed", "id": "19179337", "url": "https://pubmed.ncbi.nlm.nih.gov/19179337" }, { "database": "PubMed", "id": "21760611", "url": "https://pubmed.ncbi.nlm.nih.gov/21760611" }, { "database": "PubMed", "id": "22649724", "url": "https://pubmed.ncbi.nlm.nih.gov/22649724" }, { "database": "PubMed", "id": "22665519", "url": "https://pubmed.ncbi.nlm.nih.gov/22665519" }, { "database": "PubMed", "id": "22745786", "url": "https://pubmed.ncbi.nlm.nih.gov/22745786" }, { "database": "PubMed", "id": "23028325", "url": "https://pubmed.ncbi.nlm.nih.gov/23028325" }, { "database": "PubMed", "id": "23063561", "url": "https://pubmed.ncbi.nlm.nih.gov/23063561" }, { "database": "PubMed", "id": "23613900", "url": "https://pubmed.ncbi.nlm.nih.gov/23613900" }, { "database": "PubMed", "id": "23629676", "url": "https://pubmed.ncbi.nlm.nih.gov/23629676" }, { "database": "PubMed", "id": "24066087", "url": "https://pubmed.ncbi.nlm.nih.gov/24066087" }, { "database": "PubMed", "id": "24205378", "url": "https://pubmed.ncbi.nlm.nih.gov/24205378" }, { "database": "PubMed", "id": "25140833", "url": "https://pubmed.ncbi.nlm.nih.gov/25140833" }, { "database": "PubMed", "id": "25252913", "url": "https://pubmed.ncbi.nlm.nih.gov/25252913" }, { "database": "PubMed", "id": "25717186", "url": "https://pubmed.ncbi.nlm.nih.gov/25717186" }, { "database": "PubMed", "id": "25734483", "url": "https://pubmed.ncbi.nlm.nih.gov/25734483" }, { "database": "PubMed", "id": "25870599", "url": "https://pubmed.ncbi.nlm.nih.gov/25870599" }, { "database": "PubMed", "id": "25916191", "url": "https://pubmed.ncbi.nlm.nih.gov/25916191" }, { "database": "PubMed", "id": "26295810", "url": "https://pubmed.ncbi.nlm.nih.gov/26295810" }, { "database": "PubMed", "id": "27764189", "url": "https://pubmed.ncbi.nlm.nih.gov/27764189" }, { "database": "PubMed", "id": "27995987", "url": "https://pubmed.ncbi.nlm.nih.gov/27995987" }, { "database": "PubMed", "id": "28798148", "url": "https://pubmed.ncbi.nlm.nih.gov/28798148" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" }, { "database": "PubMed", "id": "29066806", "url": "https://pubmed.ncbi.nlm.nih.gov/29066806" }, { "database": "PubMed", "id": "29743977", "url": "https://pubmed.ncbi.nlm.nih.gov/29743977" }, { "database": "PubMed", "id": "29972810", "url": "https://pubmed.ncbi.nlm.nih.gov/29972810" }, { "database": "PubMed", "id": "30873169", "url": "https://pubmed.ncbi.nlm.nih.gov/30873169" }, { "database": "PubMed", "id": "35367415", "url": "https://pubmed.ncbi.nlm.nih.gov/35367415" }, { "database": "PubMed", "id": "9716455", "url": "https://pubmed.ncbi.nlm.nih.gov/9716455" }, { "database": "PubMed", "id": "15215251", "url": "https://pubmed.ncbi.nlm.nih.gov/15215251" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "PubMed", "id": "11564877", "url": "https://pubmed.ncbi.nlm.nih.gov/11564877" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.26295810", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Intrinsic Photosensitivity Enhances Motility of T Lymphocytes.", "journal": "Scientific reports", "date": "2016-12-20", "authors": "Phan Thieu X, Jaruga Barbara, Pingle Sandeep C, Bandyopadhyay Bidhan C, Ahern Gerard P", "reference": { "type": "PubMed", "id": "27995987", "url": "https://pubmed.ncbi.nlm.nih.gov/27995987" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 783, "end_pos": 783, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by ITK, SYK and TXK", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16497976", "url": "https://pubmed.ncbi.nlm.nih.gov/16497976" }, { "database": "PubMed", "id": "1689310", "url": "https://pubmed.ncbi.nlm.nih.gov/1689310" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "7682059", "url": "https://pubmed.ncbi.nlm.nih.gov/7682059" }, { "database": "PubMed", "id": "8657103", "url": "https://pubmed.ncbi.nlm.nih.gov/8657103" }, { "database": "PubMed", "id": "8885868", "url": "https://pubmed.ncbi.nlm.nih.gov/8885868" }, { "database": "PRO", "id": "P19174", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P19174" }, { "database": "PubMed", "id": "14568990", "url": "https://pubmed.ncbi.nlm.nih.gov/14568990" }, { "database": "PubMed", "id": "15623534", "url": "https://pubmed.ncbi.nlm.nih.gov/15623534" }, { "database": "PubMed", "id": "15764700", "url": "https://pubmed.ncbi.nlm.nih.gov/15764700" }, { "database": "PubMed", "id": "16038803", "url": "https://pubmed.ncbi.nlm.nih.gov/16038803" }, { "database": "PubMed", "id": "16081816", "url": "https://pubmed.ncbi.nlm.nih.gov/16081816" }, { "database": "PubMed", "id": "16467851", "url": "https://pubmed.ncbi.nlm.nih.gov/16467851" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "17116690", "url": "https://pubmed.ncbi.nlm.nih.gov/17116690" }, { "database": "PubMed", "id": "17148460", "url": "https://pubmed.ncbi.nlm.nih.gov/17148460" }, { "database": "PubMed", "id": "17220479", "url": "https://pubmed.ncbi.nlm.nih.gov/17220479" }, { "database": "PubMed", "id": "19179337", "url": "https://pubmed.ncbi.nlm.nih.gov/19179337" }, { "database": "PubMed", "id": "21760611", "url": "https://pubmed.ncbi.nlm.nih.gov/21760611" }, { "database": "PubMed", "id": "22649724", "url": "https://pubmed.ncbi.nlm.nih.gov/22649724" }, { "database": "PubMed", "id": "22665519", "url": "https://pubmed.ncbi.nlm.nih.gov/22665519" }, { "database": "PubMed", "id": "22745786", "url": "https://pubmed.ncbi.nlm.nih.gov/22745786" }, { "database": "PubMed", "id": "23028325", "url": "https://pubmed.ncbi.nlm.nih.gov/23028325" }, { "database": "PubMed", "id": "23063561", "url": "https://pubmed.ncbi.nlm.nih.gov/23063561" }, { "database": "PubMed", "id": "23613900", "url": "https://pubmed.ncbi.nlm.nih.gov/23613900" }, { "database": "PubMed", "id": "23629676", "url": "https://pubmed.ncbi.nlm.nih.gov/23629676" }, { "database": "PubMed", "id": "24066087", "url": "https://pubmed.ncbi.nlm.nih.gov/24066087" }, { "database": "PubMed", "id": "24205378", "url": "https://pubmed.ncbi.nlm.nih.gov/24205378" }, { "database": "PubMed", "id": "25140833", "url": "https://pubmed.ncbi.nlm.nih.gov/25140833" }, { "database": "PubMed", "id": "25252913", "url": "https://pubmed.ncbi.nlm.nih.gov/25252913" }, { "database": "PubMed", "id": "25717186", "url": "https://pubmed.ncbi.nlm.nih.gov/25717186" }, { "database": "PubMed", "id": "25734483", "url": "https://pubmed.ncbi.nlm.nih.gov/25734483" }, { "database": "PubMed", "id": "25870599", "url": "https://pubmed.ncbi.nlm.nih.gov/25870599" }, { "database": "PubMed", "id": "25916191", "url": "https://pubmed.ncbi.nlm.nih.gov/25916191" }, { "database": "PubMed", "id": "26295810", "url": "https://pubmed.ncbi.nlm.nih.gov/26295810" }, { "database": "PubMed", "id": "27764189", "url": "https://pubmed.ncbi.nlm.nih.gov/27764189" }, { "database": "PubMed", "id": "27995987", "url": "https://pubmed.ncbi.nlm.nih.gov/27995987" }, { "database": "PubMed", "id": "28798148", "url": "https://pubmed.ncbi.nlm.nih.gov/28798148" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" }, { "database": "PubMed", "id": "29066806", "url": "https://pubmed.ncbi.nlm.nih.gov/29066806" }, { "database": "PubMed", "id": "29743977", "url": "https://pubmed.ncbi.nlm.nih.gov/29743977" }, { "database": "PubMed", "id": "29972810", "url": "https://pubmed.ncbi.nlm.nih.gov/29972810" }, { "database": "PubMed", "id": "30873169", "url": "https://pubmed.ncbi.nlm.nih.gov/30873169" }, { "database": "PubMed", "id": "35367415", "url": "https://pubmed.ncbi.nlm.nih.gov/35367415" }, { "database": "PubMed", "id": "9716455", "url": "https://pubmed.ncbi.nlm.nih.gov/9716455" }, { "database": "PubMed", "id": "15215251", "url": "https://pubmed.ncbi.nlm.nih.gov/15215251" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "PubMed", "id": "11564877", "url": "https://pubmed.ncbi.nlm.nih.gov/11564877" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.27995987", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Ubiquitination of basal VEGFR2 regulates signal transduction and endothelial function.", "journal": "Biology open", "date": "2017-10-15", "authors": "Smith Gina A, Fearnley Gareth W, Abdul-Zani Izma, Wheatcroft Stephen B, Tomlinson Darren C, Harrison Michael A, Ponnambalam Sreenivasan", "reference": { "type": "PubMed", "id": "28798148", "url": "https://pubmed.ncbi.nlm.nih.gov/28798148" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 783, "end_pos": 783, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by ITK, SYK and TXK", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16497976", "url": "https://pubmed.ncbi.nlm.nih.gov/16497976" }, { "database": "PubMed", "id": "1689310", "url": "https://pubmed.ncbi.nlm.nih.gov/1689310" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "7682059", "url": "https://pubmed.ncbi.nlm.nih.gov/7682059" }, { "database": "PubMed", "id": "8657103", "url": "https://pubmed.ncbi.nlm.nih.gov/8657103" }, { "database": "PubMed", "id": "8885868", "url": "https://pubmed.ncbi.nlm.nih.gov/8885868" }, { "database": "PRO", "id": "P19174", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P19174" }, { "database": "PubMed", "id": "14568990", "url": "https://pubmed.ncbi.nlm.nih.gov/14568990" }, { "database": "PubMed", "id": "15623534", "url": "https://pubmed.ncbi.nlm.nih.gov/15623534" }, { "database": "PubMed", "id": "15764700", "url": "https://pubmed.ncbi.nlm.nih.gov/15764700" }, { "database": "PubMed", "id": "16038803", "url": "https://pubmed.ncbi.nlm.nih.gov/16038803" }, { "database": "PubMed", "id": "16081816", "url": "https://pubmed.ncbi.nlm.nih.gov/16081816" }, { "database": "PubMed", "id": "16467851", "url": "https://pubmed.ncbi.nlm.nih.gov/16467851" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "17116690", "url": "https://pubmed.ncbi.nlm.nih.gov/17116690" }, { "database": "PubMed", "id": "17148460", "url": "https://pubmed.ncbi.nlm.nih.gov/17148460" }, { "database": "PubMed", "id": "17220479", "url": "https://pubmed.ncbi.nlm.nih.gov/17220479" }, { "database": "PubMed", "id": "19179337", "url": "https://pubmed.ncbi.nlm.nih.gov/19179337" }, { "database": "PubMed", "id": "21760611", "url": "https://pubmed.ncbi.nlm.nih.gov/21760611" }, { "database": "PubMed", "id": "22649724", "url": "https://pubmed.ncbi.nlm.nih.gov/22649724" }, { "database": "PubMed", "id": "22665519", "url": "https://pubmed.ncbi.nlm.nih.gov/22665519" }, { "database": "PubMed", "id": "22745786", "url": "https://pubmed.ncbi.nlm.nih.gov/22745786" }, { "database": "PubMed", "id": "23028325", "url": "https://pubmed.ncbi.nlm.nih.gov/23028325" }, { "database": "PubMed", "id": "23063561", "url": "https://pubmed.ncbi.nlm.nih.gov/23063561" }, { "database": "PubMed", "id": "23613900", "url": "https://pubmed.ncbi.nlm.nih.gov/23613900" }, { "database": "PubMed", "id": "23629676", "url": "https://pubmed.ncbi.nlm.nih.gov/23629676" }, { "database": "PubMed", "id": "24066087", "url": "https://pubmed.ncbi.nlm.nih.gov/24066087" }, { "database": "PubMed", "id": "24205378", "url": "https://pubmed.ncbi.nlm.nih.gov/24205378" }, { "database": "PubMed", "id": "25140833", "url": "https://pubmed.ncbi.nlm.nih.gov/25140833" }, { "database": "PubMed", "id": "25252913", "url": "https://pubmed.ncbi.nlm.nih.gov/25252913" }, { "database": "PubMed", "id": "25717186", "url": "https://pubmed.ncbi.nlm.nih.gov/25717186" }, { "database": "PubMed", "id": "25734483", "url": "https://pubmed.ncbi.nlm.nih.gov/25734483" }, { "database": "PubMed", "id": "25870599", "url": "https://pubmed.ncbi.nlm.nih.gov/25870599" }, { "database": "PubMed", "id": "25916191", "url": "https://pubmed.ncbi.nlm.nih.gov/25916191" }, { "database": "PubMed", "id": "26295810", "url": "https://pubmed.ncbi.nlm.nih.gov/26295810" }, { "database": "PubMed", "id": "27764189", "url": "https://pubmed.ncbi.nlm.nih.gov/27764189" }, { "database": "PubMed", "id": "27995987", "url": "https://pubmed.ncbi.nlm.nih.gov/27995987" }, { "database": "PubMed", "id": "28798148", "url": "https://pubmed.ncbi.nlm.nih.gov/28798148" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" }, { "database": "PubMed", "id": "29066806", "url": "https://pubmed.ncbi.nlm.nih.gov/29066806" }, { "database": "PubMed", "id": "29743977", "url": "https://pubmed.ncbi.nlm.nih.gov/29743977" }, { "database": "PubMed", "id": "29972810", "url": "https://pubmed.ncbi.nlm.nih.gov/29972810" }, { "database": "PubMed", "id": "30873169", "url": "https://pubmed.ncbi.nlm.nih.gov/30873169" }, { "database": "PubMed", "id": "35367415", "url": "https://pubmed.ncbi.nlm.nih.gov/35367415" }, { "database": "PubMed", "id": "9716455", "url": "https://pubmed.ncbi.nlm.nih.gov/9716455" }, { "database": "PubMed", "id": "15215251", "url": "https://pubmed.ncbi.nlm.nih.gov/15215251" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "PubMed", "id": "11564877", "url": "https://pubmed.ncbi.nlm.nih.gov/11564877" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.28798148", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The role of phospholipase C signaling in bovine herpesvirus 1 infection.", "journal": "Veterinary research", "date": "2017-09-07", "authors": "Zhu Liqian, Yuan Chen, Ding Xiuyan, Jones Clinton, Zhu Guoqiang", "reference": { "type": "PubMed", "id": "28882164", "url": "https://pubmed.ncbi.nlm.nih.gov/28882164" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 1248, "end_pos": 1248, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "PubMed", "id": "1370476", "url": "https://pubmed.ncbi.nlm.nih.gov/1370476" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "28882164", "url": "https://pubmed.ncbi.nlm.nih.gov/28882164" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" } ], "site_lbl": "Ser1248", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.28882164", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Peptide microarray profiling identifies phospholipase C gamma 1 (PLC-\u03b31) as a potential target for t(8;21) AML.", "journal": "Oncotarget", "date": "2017-09-15", "authors": "Mahmud Hasan, Scherpen Frank J G, de Boer Tiny Meeuwsen, Lourens Harm-Jan, Schoenherr Caroline, Eder Matthias, Scherr Michaela, Guryev Victor, De Bont Eveline S", "reference": { "type": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 1248, "end_pos": 1248, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "PubMed", "id": "1370476", "url": "https://pubmed.ncbi.nlm.nih.gov/1370476" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "28882164", "url": "https://pubmed.ncbi.nlm.nih.gov/28882164" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" } ], "site_lbl": "Ser1248", "uniprot_canonical_ac": "P19174-1" }, { "start_pos": 783, "end_pos": 783, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by ITK, SYK and TXK", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16497976", "url": "https://pubmed.ncbi.nlm.nih.gov/16497976" }, { "database": "PubMed", "id": "1689310", "url": "https://pubmed.ncbi.nlm.nih.gov/1689310" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "7682059", "url": "https://pubmed.ncbi.nlm.nih.gov/7682059" }, { "database": "PubMed", "id": "8657103", "url": "https://pubmed.ncbi.nlm.nih.gov/8657103" }, { "database": "PubMed", "id": "8885868", "url": "https://pubmed.ncbi.nlm.nih.gov/8885868" }, { "database": "PRO", "id": "P19174", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P19174" }, { "database": "PubMed", "id": "14568990", "url": "https://pubmed.ncbi.nlm.nih.gov/14568990" }, { "database": "PubMed", "id": "15623534", "url": "https://pubmed.ncbi.nlm.nih.gov/15623534" }, { "database": "PubMed", "id": "15764700", "url": "https://pubmed.ncbi.nlm.nih.gov/15764700" }, { "database": "PubMed", "id": "16038803", "url": "https://pubmed.ncbi.nlm.nih.gov/16038803" }, { "database": "PubMed", "id": "16081816", "url": "https://pubmed.ncbi.nlm.nih.gov/16081816" }, { "database": "PubMed", "id": "16467851", "url": "https://pubmed.ncbi.nlm.nih.gov/16467851" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "17116690", "url": "https://pubmed.ncbi.nlm.nih.gov/17116690" }, { "database": "PubMed", "id": "17148460", "url": "https://pubmed.ncbi.nlm.nih.gov/17148460" }, { "database": "PubMed", "id": "17220479", "url": "https://pubmed.ncbi.nlm.nih.gov/17220479" }, { "database": "PubMed", "id": "19179337", "url": "https://pubmed.ncbi.nlm.nih.gov/19179337" }, { "database": "PubMed", "id": "21760611", "url": "https://pubmed.ncbi.nlm.nih.gov/21760611" }, { "database": "PubMed", "id": "22649724", "url": "https://pubmed.ncbi.nlm.nih.gov/22649724" }, { "database": "PubMed", "id": "22665519", "url": "https://pubmed.ncbi.nlm.nih.gov/22665519" }, { "database": "PubMed", "id": "22745786", "url": "https://pubmed.ncbi.nlm.nih.gov/22745786" }, { "database": "PubMed", "id": "23028325", "url": "https://pubmed.ncbi.nlm.nih.gov/23028325" }, { "database": "PubMed", "id": "23063561", "url": "https://pubmed.ncbi.nlm.nih.gov/23063561" }, { "database": "PubMed", "id": "23613900", "url": "https://pubmed.ncbi.nlm.nih.gov/23613900" }, { "database": "PubMed", "id": "23629676", "url": "https://pubmed.ncbi.nlm.nih.gov/23629676" }, { "database": "PubMed", "id": "24066087", "url": "https://pubmed.ncbi.nlm.nih.gov/24066087" }, { "database": "PubMed", "id": "24205378", "url": "https://pubmed.ncbi.nlm.nih.gov/24205378" }, { "database": "PubMed", "id": "25140833", "url": "https://pubmed.ncbi.nlm.nih.gov/25140833" }, { "database": "PubMed", "id": "25252913", "url": "https://pubmed.ncbi.nlm.nih.gov/25252913" }, { "database": "PubMed", "id": "25717186", "url": "https://pubmed.ncbi.nlm.nih.gov/25717186" }, { "database": "PubMed", "id": "25734483", "url": "https://pubmed.ncbi.nlm.nih.gov/25734483" }, { "database": "PubMed", "id": "25870599", "url": "https://pubmed.ncbi.nlm.nih.gov/25870599" }, { "database": "PubMed", "id": "25916191", "url": "https://pubmed.ncbi.nlm.nih.gov/25916191" }, { "database": "PubMed", "id": "26295810", "url": "https://pubmed.ncbi.nlm.nih.gov/26295810" }, { "database": "PubMed", "id": "27764189", "url": "https://pubmed.ncbi.nlm.nih.gov/27764189" }, { "database": "PubMed", "id": "27995987", "url": "https://pubmed.ncbi.nlm.nih.gov/27995987" }, { "database": "PubMed", "id": "28798148", "url": "https://pubmed.ncbi.nlm.nih.gov/28798148" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" }, { "database": "PubMed", "id": "29066806", "url": "https://pubmed.ncbi.nlm.nih.gov/29066806" }, { "database": "PubMed", "id": "29743977", "url": "https://pubmed.ncbi.nlm.nih.gov/29743977" }, { "database": "PubMed", "id": "29972810", "url": "https://pubmed.ncbi.nlm.nih.gov/29972810" }, { "database": "PubMed", "id": "30873169", "url": "https://pubmed.ncbi.nlm.nih.gov/30873169" }, { "database": "PubMed", "id": "35367415", "url": "https://pubmed.ncbi.nlm.nih.gov/35367415" }, { "database": "PubMed", "id": "9716455", "url": "https://pubmed.ncbi.nlm.nih.gov/9716455" }, { "database": "PubMed", "id": "15215251", "url": "https://pubmed.ncbi.nlm.nih.gov/15215251" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "PubMed", "id": "11564877", "url": "https://pubmed.ncbi.nlm.nih.gov/11564877" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.28978037", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Kinomic profiling of glioblastoma cells reveals PLCG1 as a target in restricted glucose.", "journal": "Biomarker research", "date": "2018", "authors": "Walker K, Boyd NH, Anderson JC, Willey CD, Hjelmeland AB", "reference": { "type": "PubMed", "id": "29946469", "url": "https://pubmed.ncbi.nlm.nih.gov/29946469" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 771, "end_pos": 771, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by SYK", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "PRO", "id": "P19174", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P19174" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "23059825", "url": "https://pubmed.ncbi.nlm.nih.gov/23059825" }, { "database": "PubMed", "id": "29946469", "url": "https://pubmed.ncbi.nlm.nih.gov/29946469" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "PubMed", "id": "20494825", "url": "https://pubmed.ncbi.nlm.nih.gov/20494825" }, { "database": "PubMed", "id": "8657103", "url": "https://pubmed.ncbi.nlm.nih.gov/8657103" }, { "database": "PubMed", "id": "15144186", "url": "https://pubmed.ncbi.nlm.nih.gov/15144186" } ], "site_lbl": "Tyr771", "uniprot_canonical_ac": "P19174-1" }, { "start_pos": 775, "end_pos": 775, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "15951569", "url": "https://pubmed.ncbi.nlm.nih.gov/15951569" }, { "database": "PubMed", "id": "16497976", "url": "https://pubmed.ncbi.nlm.nih.gov/16497976" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "17116690", "url": "https://pubmed.ncbi.nlm.nih.gov/17116690" }, { "database": "PubMed", "id": "29946469", "url": "https://pubmed.ncbi.nlm.nih.gov/29946469" } ], "site_lbl": "Tyr775", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.29946469", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Dynamic Allostery in PLC\u03b31 and Its Modulation by a Cancer Mutation Revealed by MD Simulation and NMR.", "journal": "Biophysical journal", "date": "2018-07-03", "authors": "Koss Hans, Bunney Tom D, Esposito Diego, Martins Marta, Katan Matilda, Driscoll Paul C", "reference": { "type": "PubMed", "id": "29972810", "url": "https://pubmed.ncbi.nlm.nih.gov/29972810" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 783, "end_pos": 783, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by ITK, SYK and TXK", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16497976", "url": "https://pubmed.ncbi.nlm.nih.gov/16497976" }, { "database": "PubMed", "id": "1689310", "url": "https://pubmed.ncbi.nlm.nih.gov/1689310" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "7682059", "url": "https://pubmed.ncbi.nlm.nih.gov/7682059" }, { "database": "PubMed", "id": "8657103", "url": "https://pubmed.ncbi.nlm.nih.gov/8657103" }, { "database": "PubMed", "id": "8885868", "url": "https://pubmed.ncbi.nlm.nih.gov/8885868" }, { "database": "PRO", "id": "P19174", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P19174" }, { "database": "PubMed", "id": "14568990", "url": "https://pubmed.ncbi.nlm.nih.gov/14568990" }, { "database": "PubMed", "id": "15623534", "url": "https://pubmed.ncbi.nlm.nih.gov/15623534" }, { "database": "PubMed", "id": "15764700", "url": "https://pubmed.ncbi.nlm.nih.gov/15764700" }, { "database": "PubMed", "id": "16038803", "url": "https://pubmed.ncbi.nlm.nih.gov/16038803" }, { "database": "PubMed", "id": "16081816", "url": "https://pubmed.ncbi.nlm.nih.gov/16081816" }, { "database": "PubMed", "id": "16467851", "url": "https://pubmed.ncbi.nlm.nih.gov/16467851" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "17116690", "url": "https://pubmed.ncbi.nlm.nih.gov/17116690" }, { "database": "PubMed", "id": "17148460", "url": "https://pubmed.ncbi.nlm.nih.gov/17148460" }, { "database": "PubMed", "id": "17220479", "url": "https://pubmed.ncbi.nlm.nih.gov/17220479" }, { "database": "PubMed", "id": "19179337", "url": "https://pubmed.ncbi.nlm.nih.gov/19179337" }, { "database": "PubMed", "id": "21760611", "url": "https://pubmed.ncbi.nlm.nih.gov/21760611" }, { "database": "PubMed", "id": "22649724", "url": "https://pubmed.ncbi.nlm.nih.gov/22649724" }, { "database": "PubMed", "id": "22665519", "url": "https://pubmed.ncbi.nlm.nih.gov/22665519" }, { "database": "PubMed", "id": "22745786", "url": "https://pubmed.ncbi.nlm.nih.gov/22745786" }, { "database": "PubMed", "id": "23028325", "url": "https://pubmed.ncbi.nlm.nih.gov/23028325" }, { "database": "PubMed", "id": "23063561", "url": "https://pubmed.ncbi.nlm.nih.gov/23063561" }, { "database": "PubMed", "id": "23613900", "url": "https://pubmed.ncbi.nlm.nih.gov/23613900" }, { "database": "PubMed", "id": "23629676", "url": "https://pubmed.ncbi.nlm.nih.gov/23629676" }, { "database": "PubMed", "id": "24066087", "url": "https://pubmed.ncbi.nlm.nih.gov/24066087" }, { "database": "PubMed", "id": "24205378", "url": "https://pubmed.ncbi.nlm.nih.gov/24205378" }, { "database": "PubMed", "id": "25140833", "url": "https://pubmed.ncbi.nlm.nih.gov/25140833" }, { "database": "PubMed", "id": "25252913", "url": "https://pubmed.ncbi.nlm.nih.gov/25252913" }, { "database": "PubMed", "id": "25717186", "url": "https://pubmed.ncbi.nlm.nih.gov/25717186" }, { "database": "PubMed", "id": "25734483", "url": "https://pubmed.ncbi.nlm.nih.gov/25734483" }, { "database": "PubMed", "id": "25870599", "url": "https://pubmed.ncbi.nlm.nih.gov/25870599" }, { "database": "PubMed", "id": "25916191", "url": "https://pubmed.ncbi.nlm.nih.gov/25916191" }, { "database": "PubMed", "id": "26295810", "url": "https://pubmed.ncbi.nlm.nih.gov/26295810" }, { "database": "PubMed", "id": "27764189", "url": "https://pubmed.ncbi.nlm.nih.gov/27764189" }, { "database": "PubMed", "id": "27995987", "url": "https://pubmed.ncbi.nlm.nih.gov/27995987" }, { "database": "PubMed", "id": "28798148", "url": "https://pubmed.ncbi.nlm.nih.gov/28798148" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" }, { "database": "PubMed", "id": "29066806", "url": "https://pubmed.ncbi.nlm.nih.gov/29066806" }, { "database": "PubMed", "id": "29743977", "url": "https://pubmed.ncbi.nlm.nih.gov/29743977" }, { "database": "PubMed", "id": "29972810", "url": "https://pubmed.ncbi.nlm.nih.gov/29972810" }, { "database": "PubMed", "id": "30873169", "url": "https://pubmed.ncbi.nlm.nih.gov/30873169" }, { "database": "PubMed", "id": "35367415", "url": "https://pubmed.ncbi.nlm.nih.gov/35367415" }, { "database": "PubMed", "id": "9716455", "url": "https://pubmed.ncbi.nlm.nih.gov/9716455" }, { "database": "PubMed", "id": "15215251", "url": "https://pubmed.ncbi.nlm.nih.gov/15215251" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "PubMed", "id": "11564877", "url": "https://pubmed.ncbi.nlm.nih.gov/11564877" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.29972810", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A kinetic model of phospholipase C-\u03b31 linking structure-based insights to dynamics of enzyme autoinhibition and activation.", "journal": "The Journal of biological chemistry", "date": "2022-05", "authors": "Nosbisch Jamie L, Bear James E, Haugh Jason M", "reference": { "type": "PubMed", "id": "35367415", "url": "https://pubmed.ncbi.nlm.nih.gov/35367415" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 783, "end_pos": 783, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by ITK, SYK and TXK", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16497976", "url": "https://pubmed.ncbi.nlm.nih.gov/16497976" }, { "database": "PubMed", "id": "1689310", "url": "https://pubmed.ncbi.nlm.nih.gov/1689310" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "7682059", "url": "https://pubmed.ncbi.nlm.nih.gov/7682059" }, { "database": "PubMed", "id": "8657103", "url": "https://pubmed.ncbi.nlm.nih.gov/8657103" }, { "database": "PubMed", "id": "8885868", "url": "https://pubmed.ncbi.nlm.nih.gov/8885868" }, { "database": "PRO", "id": "P19174", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P19174" }, { "database": "PubMed", "id": "14568990", "url": "https://pubmed.ncbi.nlm.nih.gov/14568990" }, { "database": "PubMed", "id": "15623534", "url": "https://pubmed.ncbi.nlm.nih.gov/15623534" }, { "database": "PubMed", "id": "15764700", "url": "https://pubmed.ncbi.nlm.nih.gov/15764700" }, { "database": "PubMed", "id": "16038803", "url": "https://pubmed.ncbi.nlm.nih.gov/16038803" }, { "database": "PubMed", "id": "16081816", "url": "https://pubmed.ncbi.nlm.nih.gov/16081816" }, { "database": "PubMed", "id": "16467851", "url": "https://pubmed.ncbi.nlm.nih.gov/16467851" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "17116690", "url": "https://pubmed.ncbi.nlm.nih.gov/17116690" }, { "database": "PubMed", "id": "17148460", "url": "https://pubmed.ncbi.nlm.nih.gov/17148460" }, { "database": "PubMed", "id": "17220479", "url": "https://pubmed.ncbi.nlm.nih.gov/17220479" }, { "database": "PubMed", "id": "19179337", "url": "https://pubmed.ncbi.nlm.nih.gov/19179337" }, { "database": "PubMed", "id": "21760611", "url": "https://pubmed.ncbi.nlm.nih.gov/21760611" }, { "database": "PubMed", "id": "22649724", "url": "https://pubmed.ncbi.nlm.nih.gov/22649724" }, { "database": "PubMed", "id": "22665519", "url": "https://pubmed.ncbi.nlm.nih.gov/22665519" }, { "database": "PubMed", "id": "22745786", "url": "https://pubmed.ncbi.nlm.nih.gov/22745786" }, { "database": "PubMed", "id": "23028325", "url": "https://pubmed.ncbi.nlm.nih.gov/23028325" }, { "database": "PubMed", "id": "23063561", "url": "https://pubmed.ncbi.nlm.nih.gov/23063561" }, { "database": "PubMed", "id": "23613900", "url": "https://pubmed.ncbi.nlm.nih.gov/23613900" }, { "database": "PubMed", "id": "23629676", "url": "https://pubmed.ncbi.nlm.nih.gov/23629676" }, { "database": "PubMed", "id": "24066087", "url": "https://pubmed.ncbi.nlm.nih.gov/24066087" }, { "database": "PubMed", "id": "24205378", "url": "https://pubmed.ncbi.nlm.nih.gov/24205378" }, { "database": "PubMed", "id": "25140833", "url": "https://pubmed.ncbi.nlm.nih.gov/25140833" }, { "database": "PubMed", "id": "25252913", "url": "https://pubmed.ncbi.nlm.nih.gov/25252913" }, { "database": "PubMed", "id": "25717186", "url": "https://pubmed.ncbi.nlm.nih.gov/25717186" }, { "database": "PubMed", "id": "25734483", "url": "https://pubmed.ncbi.nlm.nih.gov/25734483" }, { "database": "PubMed", "id": "25870599", "url": "https://pubmed.ncbi.nlm.nih.gov/25870599" }, { "database": "PubMed", "id": "25916191", "url": "https://pubmed.ncbi.nlm.nih.gov/25916191" }, { "database": "PubMed", "id": "26295810", "url": "https://pubmed.ncbi.nlm.nih.gov/26295810" }, { "database": "PubMed", "id": "27764189", "url": "https://pubmed.ncbi.nlm.nih.gov/27764189" }, { "database": "PubMed", "id": "27995987", "url": "https://pubmed.ncbi.nlm.nih.gov/27995987" }, { "database": "PubMed", "id": "28798148", "url": "https://pubmed.ncbi.nlm.nih.gov/28798148" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" }, { "database": "PubMed", "id": "29066806", "url": "https://pubmed.ncbi.nlm.nih.gov/29066806" }, { "database": "PubMed", "id": "29743977", "url": "https://pubmed.ncbi.nlm.nih.gov/29743977" }, { "database": "PubMed", "id": "29972810", "url": "https://pubmed.ncbi.nlm.nih.gov/29972810" }, { "database": "PubMed", "id": "30873169", "url": "https://pubmed.ncbi.nlm.nih.gov/30873169" }, { "database": "PubMed", "id": "35367415", "url": "https://pubmed.ncbi.nlm.nih.gov/35367415" }, { "database": "PubMed", "id": "9716455", "url": "https://pubmed.ncbi.nlm.nih.gov/9716455" }, { "database": "PubMed", "id": "15215251", "url": "https://pubmed.ncbi.nlm.nih.gov/15215251" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "PubMed", "id": "11564877", "url": "https://pubmed.ncbi.nlm.nih.gov/11564877" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.35367415", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Loss of phospholipase C\u03b31 suppresses hepatocellular carcinogenesis through blockade of STAT3-mediated cancer development.", "journal": "Hepatology communications", "date": "2022-11", "authors": "Seo Eun-Bi, Jang Hyun-Jun, Kwon Sun-Ho, Kwon Yong-Jin, Kim Seul-Ki, Lee Song-Hee, Jeong Ae Jin, Shin Hyun Mu, Kim Yong-Nyun, Ma Stephanie, Kim Haeryoung, Lee Yun-Han, Suh Pann-Ghill, Ye Sang-Kyu", "reference": { "type": "PubMed", "id": "36153805", "url": "https://pubmed.ncbi.nlm.nih.gov/36153805" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.36153805", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A frequent PLC\u03b31 mutation in adult T-cell leukemia/lymphoma determines functional properties of the malignant cells.", "journal": "Biochimica et biophysica acta. Molecular basis of disease", "date": "2023-02", "authors": "Prawiro Christy, Bunney Tom D, Kampyli Charis, Yaguchi Hiroko, Katan Matilda, Bangham Charles R M", "reference": { "type": "PubMed", "id": "36442790", "url": "https://pubmed.ncbi.nlm.nih.gov/36442790" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.36442790", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A gain-of-function variation in PLCG1 causes a new immune dysregulation disease.", "journal": "The Journal of allergy and clinical immunology", "date": "2023-11", "authors": "Tao Panfeng, Han Xu, Wang Qintao, Wang Shihao, Zhang Jiahui, Liu Lin, Fan Xiaorui, Liu Chenlu, Liu Meng, Guo Li, Lee Pui Y, Aksentijevich Ivona, Zhou Qing", "reference": { "type": "PubMed", "id": "37422272", "url": "https://pubmed.ncbi.nlm.nih.gov/37422272" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.37422272", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Endothelial VEGFR2-PLC\u03b3 signaling regulates vascular permeability and anti-tumor immunity through eNOS/Src.", "journal": "The Journal of clinical investigation", "date": "2023-08-31", "authors": "Sj\u00f6berg Elin, Melssen Marit, Richards Mark, Ding Yindi, Chanoca Catarina, Chen Dongying, Nwadozi Emmanuel, Pal Sagnik, Love Dominic T, Ninchoji Takeshi, Shibuya Masabumi, Simons Michael, Dimberg Anna, Claesson-Welsh Lena", "reference": { "type": "PubMed", "id": "37651195", "url": "https://pubmed.ncbi.nlm.nih.gov/37651195" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.37651195", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Solution structure of the SH3 domain of phospholipase C-gamma.", "journal": "Cell", "date": "1993", "authors": "Kohda D, Hatanaka H, Odaka M, Mandiyan V, Ullrich A, Schlessinger J, Inagaki F", "reference": { "type": "PubMed", "id": "7681365", "url": "https://pubmed.ncbi.nlm.nih.gov/7681365" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7681365", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Epidermal growth factor activates phospholipase C-gamma 1 via G(i)1-2 proteins in isolated pancreatic acinar membranes.", "journal": "The American journal of physiology", "date": "1997-05", "authors": "Piiper A, Stryjek-Kaminska D, Zeuzem S", "reference": { "type": "PubMed", "id": "9176240", "url": "https://pubmed.ncbi.nlm.nih.gov/9176240" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 783, "end_pos": 783, "kinase_uniprot_canonical_ac": "P00533-1", "kinase_gene_name": "EGFR", "residue": "Tyr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16497976", "url": "https://pubmed.ncbi.nlm.nih.gov/16497976" }, { "database": "PubMed", "id": "1689310", "url": "https://pubmed.ncbi.nlm.nih.gov/1689310" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "7682059", "url": "https://pubmed.ncbi.nlm.nih.gov/7682059" }, { "database": "PubMed", "id": "8657103", "url": "https://pubmed.ncbi.nlm.nih.gov/8657103" }, { "database": "PubMed", "id": "8885868", "url": "https://pubmed.ncbi.nlm.nih.gov/8885868" }, { "database": "PubMed", "id": "9176240", "url": "https://pubmed.ncbi.nlm.nih.gov/9176240" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.9176240", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Phosphorylation of phospholipase Cgamma1 on tyrosine residue 783 by platelet-derived growth factor regulates reorganization of the cytoskeleton.", "journal": "Experimental cell research", "date": "1998", "authors": "Yu H, Fukami K, Itoh T, Takenawa T", "reference": { "type": "PubMed", "id": "9716455", "url": "https://pubmed.ncbi.nlm.nih.gov/9716455" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P19174-1", "protein_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1", "gene_name": "PLCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 783, "end_pos": 783, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine; by ITK, SYK and TXK", "evidence": [ { "database": "UniProtKB", "id": "P19174", "url": "https://www.uniprot.org/uniprotkb/P19174" }, { "database": "iPTMnet", "id": "P19174", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P19174" }, { "database": "PubMed", "id": "16497976", "url": "https://pubmed.ncbi.nlm.nih.gov/16497976" }, { "database": "PubMed", "id": "1689310", "url": "https://pubmed.ncbi.nlm.nih.gov/1689310" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "20068231", "url": "https://pubmed.ncbi.nlm.nih.gov/20068231" }, { "database": "PubMed", "id": "7682059", "url": "https://pubmed.ncbi.nlm.nih.gov/7682059" }, { "database": "PubMed", "id": "8657103", "url": "https://pubmed.ncbi.nlm.nih.gov/8657103" }, { "database": "PubMed", "id": "8885868", "url": "https://pubmed.ncbi.nlm.nih.gov/8885868" }, { "database": "PRO", "id": "P19174", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P19174" }, { "database": "PubMed", "id": "14568990", "url": "https://pubmed.ncbi.nlm.nih.gov/14568990" }, { "database": "PubMed", "id": "15623534", "url": "https://pubmed.ncbi.nlm.nih.gov/15623534" }, { "database": "PubMed", "id": "15764700", "url": "https://pubmed.ncbi.nlm.nih.gov/15764700" }, { "database": "PubMed", "id": "16038803", "url": "https://pubmed.ncbi.nlm.nih.gov/16038803" }, { "database": "PubMed", "id": "16081816", "url": "https://pubmed.ncbi.nlm.nih.gov/16081816" }, { "database": "PubMed", "id": "16467851", "url": "https://pubmed.ncbi.nlm.nih.gov/16467851" }, { "database": "PubMed", "id": "16525023", "url": "https://pubmed.ncbi.nlm.nih.gov/16525023" }, { "database": "PubMed", "id": "17116690", "url": "https://pubmed.ncbi.nlm.nih.gov/17116690" }, { "database": "PubMed", "id": "17148460", "url": "https://pubmed.ncbi.nlm.nih.gov/17148460" }, { "database": "PubMed", "id": "17220479", "url": "https://pubmed.ncbi.nlm.nih.gov/17220479" }, { "database": "PubMed", "id": "19179337", "url": "https://pubmed.ncbi.nlm.nih.gov/19179337" }, { "database": "PubMed", "id": "21760611", "url": "https://pubmed.ncbi.nlm.nih.gov/21760611" }, { "database": "PubMed", "id": "22649724", "url": "https://pubmed.ncbi.nlm.nih.gov/22649724" }, { "database": "PubMed", "id": "22665519", "url": "https://pubmed.ncbi.nlm.nih.gov/22665519" }, { "database": "PubMed", "id": "22745786", "url": "https://pubmed.ncbi.nlm.nih.gov/22745786" }, { "database": "PubMed", "id": "23028325", "url": "https://pubmed.ncbi.nlm.nih.gov/23028325" }, { "database": "PubMed", "id": "23063561", "url": "https://pubmed.ncbi.nlm.nih.gov/23063561" }, { "database": "PubMed", "id": "23613900", "url": "https://pubmed.ncbi.nlm.nih.gov/23613900" }, { "database": "PubMed", "id": "23629676", "url": "https://pubmed.ncbi.nlm.nih.gov/23629676" }, { "database": "PubMed", "id": "24066087", "url": "https://pubmed.ncbi.nlm.nih.gov/24066087" }, { "database": "PubMed", "id": "24205378", "url": "https://pubmed.ncbi.nlm.nih.gov/24205378" }, { "database": "PubMed", "id": "25140833", "url": "https://pubmed.ncbi.nlm.nih.gov/25140833" }, { "database": "PubMed", "id": "25252913", "url": "https://pubmed.ncbi.nlm.nih.gov/25252913" }, { "database": "PubMed", "id": "25717186", "url": "https://pubmed.ncbi.nlm.nih.gov/25717186" }, { "database": "PubMed", "id": "25734483", "url": "https://pubmed.ncbi.nlm.nih.gov/25734483" }, { "database": "PubMed", "id": "25870599", "url": "https://pubmed.ncbi.nlm.nih.gov/25870599" }, { "database": "PubMed", "id": "25916191", "url": "https://pubmed.ncbi.nlm.nih.gov/25916191" }, { "database": "PubMed", "id": "26295810", "url": "https://pubmed.ncbi.nlm.nih.gov/26295810" }, { "database": "PubMed", "id": "27764189", "url": "https://pubmed.ncbi.nlm.nih.gov/27764189" }, { "database": "PubMed", "id": "27995987", "url": "https://pubmed.ncbi.nlm.nih.gov/27995987" }, { "database": "PubMed", "id": "28798148", "url": "https://pubmed.ncbi.nlm.nih.gov/28798148" }, { "database": "PubMed", "id": "28978037", "url": "https://pubmed.ncbi.nlm.nih.gov/28978037" }, { "database": "PubMed", "id": "29066806", "url": "https://pubmed.ncbi.nlm.nih.gov/29066806" }, { "database": "PubMed", "id": "29743977", "url": "https://pubmed.ncbi.nlm.nih.gov/29743977" }, { "database": "PubMed", "id": "29972810", "url": "https://pubmed.ncbi.nlm.nih.gov/29972810" }, { "database": "PubMed", "id": "30873169", "url": "https://pubmed.ncbi.nlm.nih.gov/30873169" }, { "database": "PubMed", "id": "35367415", "url": "https://pubmed.ncbi.nlm.nih.gov/35367415" }, { "database": "PubMed", "id": "9716455", "url": "https://pubmed.ncbi.nlm.nih.gov/9716455" }, { "database": "PubMed", "id": "15215251", "url": "https://pubmed.ncbi.nlm.nih.gov/15215251" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "PubMed", "id": "11564877", "url": "https://pubmed.ncbi.nlm.nih.gov/11564877" } ], "site_lbl": "Tyr783", "uniprot_canonical_ac": "P19174-1" } ], "record_id": "pubmed.9716455", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterisation of human adenylyl cyclase IX reveals inhibition by Ca(2+)/Calcineurin and differential mRNA plyadenylation.", "journal": "Journal of neurochemistry", "date": "2000", "authors": "Paterson JM, Smith SM, Simpson J, Grace OC, Sosunov AA, Bell JE, Antoni FA", "reference": { "type": "PubMed", "id": "10987815", "url": "https://pubmed.ncbi.nlm.nih.gov/10987815" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O60503", "url": "https://www.uniprot.org/uniprotkb/O60503" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10987815", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "An Ile to Met polymorphism in the catalytic domain of adenylyl cyclase type 9 confers reduced beta2-adrenergic receptor stimulation.", "journal": "Pharmacogenetics", "date": "2003", "authors": "Small KM, Brown KM, Theiss CT, Seman CA, Weiss ST, Liggett SB", "reference": { "type": "PubMed", "id": "12972952", "url": "https://pubmed.ncbi.nlm.nih.gov/12972952" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O60503", "url": "https://www.uniprot.org/uniprotkb/O60503" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12972952", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular properties and pharmacogenetics of a polymorphism of adenylyl cyclase type 9 in asthma: interaction between beta-agonist and corticosteroid pathways.", "journal": "Human molecular genetics", "date": "2005", "authors": "Tantisira KG, Small KM, Litonjua AA, Weiss ST, Liggett SB", "reference": { "type": "PubMed", "id": "15879435", "url": "https://pubmed.ncbi.nlm.nih.gov/15879435" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O60503", "url": "https://www.uniprot.org/uniprotkb/O60503" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15879435", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A sex-specific evolutionary interaction between ADCY9 and CETP.", "journal": "eLife", "date": "2021", "authors": "Gamache I, Legault MA, Grenier JC, Sanchez R, Rheaume E, Asgari S, Barhdadi A, Zada YF, Trochet H, Luo Y, Lecca L, Murray M, Raychaudhuri S, Tardif JC, Dube MP, Hussin J", "reference": { "type": "PubMed", "id": "34609279", "url": "https://pubmed.ncbi.nlm.nih.gov/34609279" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O60503", "url": "https://www.uniprot.org/uniprotkb/O60503" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.34609279", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "[Association of the ADCY9 gene and gene-environmental interaction with the susceptibility to childhood bronchial asthma].", "journal": "Zhongguo dang dai er ke za zhi = Chinese journal of contemporary pediatrics", "date": "2022", "authors": "Jia JJ, Wei B, Li LX, Ren MY, Zhang SN, Liu J, Zhang YX", "reference": { "type": "PubMed", "id": "36111722", "url": "https://pubmed.ncbi.nlm.nih.gov/36111722" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O60503", "url": "https://www.uniprot.org/uniprotkb/O60503" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.36111722", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Human adenylyl cyclase 9 is auto-stimulated by its isoform-specific C-terminal domain.", "journal": "Life science alliance", "date": "2023-04", "authors": "Chen Zhihao, Antoni Ferenc A", "reference": { "type": "PubMed", "id": "36657828", "url": "https://pubmed.ncbi.nlm.nih.gov/36657828" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O60503", "url": "https://www.uniprot.org/uniprotkb/O60503" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.36657828", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The rs2601796 variant in ADCY9 gene is associated with severe asthma and less bronchodilator response.", "journal": "Gene", "date": "2023-11-30", "authors": "Teixeira Helena M P, Cruz \u00c1lvaro A, Jesus Talita S, de Santana Maria B R, Jesus Marinalva S, Tugores Rafaela, Araujo Wedson S, Reis Rebeca C C, Pinheiro Gabriela P, Figueiredo Camila A, Costa Ryan S", "reference": { "type": "PubMed", "id": "37579959", "url": "https://pubmed.ncbi.nlm.nih.gov/37579959" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O60503", "url": "https://www.uniprot.org/uniprotkb/O60503" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.37579959", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cloning, chromosomal mapping, and regulatory properties of the human type 9 adenylyl cyclase (ADCY9).", "journal": "Genomics", "date": "1998-05-15", "authors": "Hacker B M, Tomlinson J E, Wayman G A, Sultana R, Chan G, Villacres E, Disteche C, Storm D R", "reference": { "type": "PubMed", "id": "9628827", "url": "https://pubmed.ncbi.nlm.nih.gov/9628827" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O60503", "url": "https://www.uniprot.org/uniprotkb/O60503" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9628827", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Critical role of WW domain phosphorylation in regulating phosphoserine binding activity and Pin1 function.", "journal": "The Journal of biological chemistry", "date": "2002", "authors": "Lu PJ, Zhou XZ, Liou YC, Noel JP, Lu KP", "reference": { "type": "PubMed", "id": "11723108", "url": "https://pubmed.ncbi.nlm.nih.gov/11723108" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13526-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1", "gene_name": "PIN1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13526", "url": "https://www.uniprot.org/uniprotkb/Q13526" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 16, "end_pos": 16, "kinase_uniprot_canonical_ac": "P17612-1", "kinase_gene_name": "PRKACA", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q13526", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q13526" }, { "database": "PubMed", "id": "11723108", "url": "https://pubmed.ncbi.nlm.nih.gov/11723108" } ], "site_lbl": "Ser16", "uniprot_canonical_ac": "Q13526-1" }, { "start_pos": 16, "end_pos": 16, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q13526", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q13526" }, { "database": "PubMed", "id": "11723108", "url": "https://pubmed.ncbi.nlm.nih.gov/11723108" }, { "database": "PubMed", "id": "20060900", "url": "https://pubmed.ncbi.nlm.nih.gov/20060900" }, { "database": "PubMed", "id": "20529865", "url": "https://pubmed.ncbi.nlm.nih.gov/20529865" }, { "database": "PubMed", "id": "22261503", "url": "https://pubmed.ncbi.nlm.nih.gov/22261503" }, { "database": "PubMed", "id": "22562304", "url": "https://pubmed.ncbi.nlm.nih.gov/22562304" }, { "database": "PubMed", "id": "23456038", "url": "https://pubmed.ncbi.nlm.nih.gov/23456038" }, { "database": "PubMed", "id": "23970419", "url": "https://pubmed.ncbi.nlm.nih.gov/23970419" }, { "database": "PubMed", "id": "29665256", "url": "https://pubmed.ncbi.nlm.nih.gov/29665256" } ], "site_lbl": "Ser16", "uniprot_canonical_ac": "Q13526-1" } ], "record_id": "pubmed.11723108", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Polo-like kinase 1-mediated phosphorylation stabilizes Pin1 by inhibiting its ubiquitination in human cells.", "journal": "The Journal of biological chemistry", "date": "2005", "authors": "Eckerdt F, Yuan J, Saxena K, Martin B, Kappel S, Lindenau C, Kramer A, Naumann S, Daum S, Fischer G, Dikic I, Kaufmann M, Strebhardt K", "reference": { "type": "PubMed", "id": "16118204", "url": "https://pubmed.ncbi.nlm.nih.gov/16118204" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13526-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1", "gene_name": "PIN1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13526", "url": "https://www.uniprot.org/uniprotkb/Q13526" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 65, "end_pos": 65, "kinase_uniprot_canonical_ac": "P53350-1", "kinase_gene_name": "PLK1", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q13526", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q13526" }, { "database": "PubMed", "id": "16118204", "url": "https://pubmed.ncbi.nlm.nih.gov/16118204" } ], "site_lbl": "Ser65", "uniprot_canonical_ac": "Q13526-1" }, { "start_pos": 65, "end_pos": 65, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q13526", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q13526" }, { "database": "PubMed", "id": "16118204", "url": "https://pubmed.ncbi.nlm.nih.gov/16118204" }, { "database": "PubMed", "id": "29665256", "url": "https://pubmed.ncbi.nlm.nih.gov/29665256" } ], "site_lbl": "Ser65", "uniprot_canonical_ac": "Q13526-1" } ], "record_id": "pubmed.16118204", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Prolyl-peptidyl isomerase, Pin1, phosphorylation is compromised in association with the expression of the HFE polymorphic allele, H63D.", "journal": "Biochimica et biophysica acta", "date": "2010", "authors": "Hall EC 2nd, Lee SY, Simmons Z, Neely EB, Nandar W, Connor JR", "reference": { "type": "PubMed", "id": "20060900", "url": "https://pubmed.ncbi.nlm.nih.gov/20060900" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13526-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1", "gene_name": "PIN1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13526", "url": "https://www.uniprot.org/uniprotkb/Q13526" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 16, "end_pos": 16, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q13526", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q13526" }, { "database": "PubMed", "id": "11723108", "url": "https://pubmed.ncbi.nlm.nih.gov/11723108" }, { "database": "PubMed", "id": "20060900", "url": "https://pubmed.ncbi.nlm.nih.gov/20060900" }, { "database": "PubMed", "id": "20529865", "url": "https://pubmed.ncbi.nlm.nih.gov/20529865" }, { "database": "PubMed", "id": "22261503", "url": "https://pubmed.ncbi.nlm.nih.gov/22261503" }, { "database": "PubMed", "id": "22562304", "url": "https://pubmed.ncbi.nlm.nih.gov/22562304" }, { "database": "PubMed", "id": "23456038", "url": "https://pubmed.ncbi.nlm.nih.gov/23456038" }, { "database": "PubMed", "id": "23970419", "url": "https://pubmed.ncbi.nlm.nih.gov/23970419" }, { "database": "PubMed", "id": "29665256", "url": "https://pubmed.ncbi.nlm.nih.gov/29665256" } ], "site_lbl": "Ser16", "uniprot_canonical_ac": "Q13526-1" } ], "record_id": "pubmed.20060900", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Uncoating of human immunodeficiency virus type 1 requires prolyl isomerase Pin1.", "journal": "The Journal of biological chemistry", "date": "2010", "authors": "Misumi S, Inoue M, Dochi T, Kishimoto N, Hasegawa N, Takamune N, Shoji S", "reference": { "type": "PubMed", "id": "20529865", "url": "https://pubmed.ncbi.nlm.nih.gov/20529865" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13526-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1", "gene_name": "PIN1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13526", "url": "https://www.uniprot.org/uniprotkb/Q13526" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 16, "end_pos": 16, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q13526", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q13526" }, { "database": "PubMed", "id": "11723108", "url": "https://pubmed.ncbi.nlm.nih.gov/11723108" }, { "database": "PubMed", "id": "20060900", "url": "https://pubmed.ncbi.nlm.nih.gov/20060900" }, { "database": "PubMed", "id": "20529865", "url": "https://pubmed.ncbi.nlm.nih.gov/20529865" }, { "database": "PubMed", "id": "22261503", "url": "https://pubmed.ncbi.nlm.nih.gov/22261503" }, { "database": "PubMed", "id": "22562304", "url": "https://pubmed.ncbi.nlm.nih.gov/22562304" }, { "database": "PubMed", "id": "23456038", "url": "https://pubmed.ncbi.nlm.nih.gov/23456038" }, { "database": "PubMed", "id": "23970419", "url": "https://pubmed.ncbi.nlm.nih.gov/23970419" }, { "database": "PubMed", "id": "29665256", "url": "https://pubmed.ncbi.nlm.nih.gov/29665256" } ], "site_lbl": "Ser16", "uniprot_canonical_ac": "Q13526-1" } ], "record_id": "pubmed.20529865", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Pin1 contribution to Alzheimer's disease: transcriptional and epigenetic mechanisms in patients with late-onset Alzheimer's disease.", "journal": "Neuro-degenerative diseases", "date": "2012", "authors": "Arosio B, Bulbarelli A, Bastias Candia S, Lonati E, Mastronardi L, Romualdi P, Candeletti S, Gussago C, Galimberti D, Scarpini E, Dell'Osso B, Altamura C, MacCarrone M, Bergamaschini L, D'Addario C, Mari D", "reference": { "type": "PubMed", "id": "22261503", "url": "https://pubmed.ncbi.nlm.nih.gov/22261503" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13526-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1", "gene_name": "PIN1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13526", "url": "https://www.uniprot.org/uniprotkb/Q13526" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 16, "end_pos": 16, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q13526", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q13526" }, { "database": "PubMed", "id": "11723108", "url": "https://pubmed.ncbi.nlm.nih.gov/11723108" }, { "database": "PubMed", "id": "20060900", "url": "https://pubmed.ncbi.nlm.nih.gov/20060900" }, { "database": "PubMed", "id": "20529865", "url": "https://pubmed.ncbi.nlm.nih.gov/20529865" }, { "database": "PubMed", "id": "22261503", "url": "https://pubmed.ncbi.nlm.nih.gov/22261503" }, { "database": "PubMed", "id": "22562304", "url": "https://pubmed.ncbi.nlm.nih.gov/22562304" }, { "database": "PubMed", "id": "23456038", "url": "https://pubmed.ncbi.nlm.nih.gov/23456038" }, { "database": "PubMed", "id": "23970419", "url": "https://pubmed.ncbi.nlm.nih.gov/23970419" }, { "database": "PubMed", "id": "29665256", "url": "https://pubmed.ncbi.nlm.nih.gov/29665256" } ], "site_lbl": "Ser16", "uniprot_canonical_ac": "Q13526-1" } ], "record_id": "pubmed.22261503", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "TPA-induced cell transformation provokes a complex formation between Pin1 and 90 kDa ribosomal protein S6 kinase 2.", "journal": "Molecular and cellular biochemistry", "date": "2012", "authors": "Cho YS, Park SY, Kim DJ, Lee SH, Woo KM, Lee KA, Lee YJ, Cho YY, Shim JH", "reference": { "type": "PubMed", "id": "22562304", "url": "https://pubmed.ncbi.nlm.nih.gov/22562304" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13526-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1", "gene_name": "PIN1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13526", "url": "https://www.uniprot.org/uniprotkb/Q13526" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 16, "end_pos": 16, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q13526", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q13526" }, { "database": "PubMed", "id": "11723108", "url": "https://pubmed.ncbi.nlm.nih.gov/11723108" }, { "database": "PubMed", "id": "20060900", "url": "https://pubmed.ncbi.nlm.nih.gov/20060900" }, { "database": "PubMed", "id": "20529865", "url": "https://pubmed.ncbi.nlm.nih.gov/20529865" }, { "database": "PubMed", "id": "22261503", "url": "https://pubmed.ncbi.nlm.nih.gov/22261503" }, { "database": "PubMed", "id": "22562304", "url": "https://pubmed.ncbi.nlm.nih.gov/22562304" }, { "database": "PubMed", "id": "23456038", "url": "https://pubmed.ncbi.nlm.nih.gov/23456038" }, { "database": "PubMed", "id": "23970419", "url": "https://pubmed.ncbi.nlm.nih.gov/23970419" }, { "database": "PubMed", "id": "29665256", "url": "https://pubmed.ncbi.nlm.nih.gov/29665256" } ], "site_lbl": "Ser16", "uniprot_canonical_ac": "Q13526-1" } ], "record_id": "pubmed.22562304", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mixed-lineage kinase 3 phosphorylates prolyl-isomerase Pin1 to regulate its nuclear translocation and cellular function.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2012", "authors": "Rangasamy V, Mishra R, Sondarva G, Das S, Lee TH, Bakowska JC, Tzivion G, Malter JS, Rana B, Lu KP, Kanthasamy A, Rana A", "reference": { "type": "PubMed", "id": "22566623", "url": "https://pubmed.ncbi.nlm.nih.gov/22566623" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13526-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1", "gene_name": "PIN1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13526", "url": "https://www.uniprot.org/uniprotkb/Q13526" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 138, "end_pos": 138, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q13526", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q13526" }, { "database": "PubMed", "id": "22566623", "url": "https://pubmed.ncbi.nlm.nih.gov/22566623" } ], "site_lbl": "Ser138", "uniprot_canonical_ac": "Q13526-1" } ], "record_id": "pubmed.22566623", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Unraveling a phosphorylation event in a folded protein by NMR spectroscopy: phosphorylation of the Pin1 WW domain by PKA.", "journal": "Journal of biomolecular NMR", "date": "2013", "authors": "Smet-Nocca C, Launay H, Wieruszeski JM, Lippens G, Landrieu I", "reference": { "type": "PubMed", "id": "23456038", "url": "https://pubmed.ncbi.nlm.nih.gov/23456038" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13526-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1", "gene_name": "PIN1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13526", "url": "https://www.uniprot.org/uniprotkb/Q13526" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 16, "end_pos": 16, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q13526", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q13526" }, { "database": "PubMed", "id": "11723108", "url": "https://pubmed.ncbi.nlm.nih.gov/11723108" }, { "database": "PubMed", "id": "20060900", "url": "https://pubmed.ncbi.nlm.nih.gov/20060900" }, { "database": "PubMed", "id": "20529865", "url": "https://pubmed.ncbi.nlm.nih.gov/20529865" }, { "database": "PubMed", "id": "22261503", "url": "https://pubmed.ncbi.nlm.nih.gov/22261503" }, { "database": "PubMed", "id": "22562304", "url": "https://pubmed.ncbi.nlm.nih.gov/22562304" }, { "database": "PubMed", "id": "23456038", "url": "https://pubmed.ncbi.nlm.nih.gov/23456038" }, { "database": "PubMed", "id": "23970419", "url": "https://pubmed.ncbi.nlm.nih.gov/23970419" }, { "database": "PubMed", "id": "29665256", "url": "https://pubmed.ncbi.nlm.nih.gov/29665256" } ], "site_lbl": "Ser16", "uniprot_canonical_ac": "Q13526-1" } ], "record_id": "pubmed.23456038", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Pin1 acts as a negative regulator of the G2/M transition by interacting with the Aurora-A-Bora complex.", "journal": "Journal of cell science", "date": "2013", "authors": "Lee YC, Que J, Chen YC, Lin JT, Liou YC, Liao PC, Liu YP, Lee KH, Lin LC, Hsiao M, Hung LY, Huang CY, Lu PJ", "reference": { "type": "PubMed", "id": "23970419", "url": "https://pubmed.ncbi.nlm.nih.gov/23970419" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13526-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1", "gene_name": "PIN1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13526", "url": "https://www.uniprot.org/uniprotkb/Q13526" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 16, "end_pos": 16, "kinase_uniprot_canonical_ac": "O14965-1", "kinase_gene_name": "AURKA", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q13526", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q13526" }, { "database": "PubMed", "id": "23970419", "url": "https://pubmed.ncbi.nlm.nih.gov/23970419" } ], "site_lbl": "Ser16", "uniprot_canonical_ac": "Q13526-1" }, { "start_pos": 16, "end_pos": 16, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q13526", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q13526" }, { "database": "PubMed", "id": "11723108", "url": "https://pubmed.ncbi.nlm.nih.gov/11723108" }, { "database": "PubMed", "id": "20060900", "url": "https://pubmed.ncbi.nlm.nih.gov/20060900" }, { "database": "PubMed", "id": "20529865", "url": "https://pubmed.ncbi.nlm.nih.gov/20529865" }, { "database": "PubMed", "id": "22261503", "url": "https://pubmed.ncbi.nlm.nih.gov/22261503" }, { "database": "PubMed", "id": "22562304", "url": "https://pubmed.ncbi.nlm.nih.gov/22562304" }, { "database": "PubMed", "id": "23456038", "url": "https://pubmed.ncbi.nlm.nih.gov/23456038" }, { "database": "PubMed", "id": "23970419", "url": "https://pubmed.ncbi.nlm.nih.gov/23970419" }, { "database": "PubMed", "id": "29665256", "url": "https://pubmed.ncbi.nlm.nih.gov/29665256" } ], "site_lbl": "Ser16", "uniprot_canonical_ac": "Q13526-1" } ], "record_id": "pubmed.23970419", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "COT phosphorylates prolyl-isomerase Pin1 to promote tumorigenesis in breast cancer.", "journal": "Molecular carcinogenesis", "date": "2015", "authors": "Kim G, Khanal P, Kim JY, Yun HJ, Lim SC, Shim JH, Choi HS", "reference": { "type": "PubMed", "id": "24265246", "url": "https://pubmed.ncbi.nlm.nih.gov/24265246" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13526-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1", "gene_name": "PIN1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13526", "url": "https://www.uniprot.org/uniprotkb/Q13526" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 16, "end_pos": 16, "kinase_uniprot_canonical_ac": "P41279-1", "kinase_gene_name": "MAP3K8", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q13526", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q13526" }, { "database": "PubMed", "id": "24265246", "url": "https://pubmed.ncbi.nlm.nih.gov/24265246" } ], "site_lbl": "Ser16", "uniprot_canonical_ac": "Q13526-1" } ], "record_id": "pubmed.24265246", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structural tailoring of hydrogen-bonded poly(acrylic acid)/poly(ethylene oxide) multilayer thin films for reduced gas permeability.", "journal": "Soft matter", "date": "2015", "authors": "Xiang F, Ward SM, Givens TM, Grunlan JC", "reference": { "type": "PubMed", "id": "25519816", "url": "https://pubmed.ncbi.nlm.nih.gov/25519816" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13526-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1", "gene_name": "PIN1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13526", "url": "https://www.uniprot.org/uniprotkb/Q13526" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 138, "end_pos": 138, "kinase_uniprot_canonical_ac": "Q16584-1", "kinase_gene_name": "MAP3K11", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q13526", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q13526" }, { "database": "PubMed", "id": "25519816", "url": "https://pubmed.ncbi.nlm.nih.gov/25519816" } ], "site_lbl": "Ser138", "uniprot_canonical_ac": "Q13526-1" } ], "record_id": "pubmed.25519816", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Active Pin1 is a key target of all-trans retinoic acid in acute promyelocytic leukemia and breast cancer.", "journal": "Nature medicine", "date": "2015", "authors": "Wei S, Kozono S, Kats L, Nechama M, Li W, Guarnerio J, Luo M, You MH, Yao Y, Kondo A, Hu H, Bozkurt G, Moerke NJ, Cao S, Reschke M, Chen CH, Rego EM, Lo-Coco F, Cantley LC, Lee TH, Wu H, Zhang Y, Pandolfi PP, Zhou XZ, Lu KP", "reference": { "type": "PubMed", "id": "25849135", "url": "https://pubmed.ncbi.nlm.nih.gov/25849135" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13526-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1", "gene_name": "PIN1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13526", "url": "https://www.uniprot.org/uniprotkb/Q13526" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 71, "end_pos": 71, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine; by DAPK1", "evidence": [ { "database": "UniProtKB", "id": "Q13526", "url": "https://www.uniprot.org/uniprotkb/Q13526" }, { "database": "iPTMnet", "id": "Q13526", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q13526" }, { "database": "PubMed", "id": "21497122", "url": "https://pubmed.ncbi.nlm.nih.gov/21497122" }, { "database": "PubMed", "id": "25849135", "url": "https://pubmed.ncbi.nlm.nih.gov/25849135" }, { "database": "PubMed", "id": "29665256", "url": "https://pubmed.ncbi.nlm.nih.gov/29665256" }, { "database": "PubMed", "id": "35002518", "url": "https://pubmed.ncbi.nlm.nih.gov/35002518" }, { "database": "PubMed", "id": "29686383", "url": "https://pubmed.ncbi.nlm.nih.gov/29686383" } ], "site_lbl": "Ser71", "uniprot_canonical_ac": "Q13526-1" } ], "record_id": "pubmed.25849135", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Death-associated protein kinase 1 mediates Abeta42 aggregation-induced neuronal apoptosis and tau dysregulation in Alzheimer's disease.", "journal": "International journal of biological sciences", "date": "2022", "authors": "Zhang T, Xia Y, Hu L, Chen D, Gan CL, Wang L, Mei Y, Lan G, Shui X, Tian Y, Li R, Zhang M, Lee TH", "reference": { "type": "PubMed", "id": "35002518", "url": "https://pubmed.ncbi.nlm.nih.gov/35002518" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13526-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1", "gene_name": "PIN1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13526", "url": "https://www.uniprot.org/uniprotkb/Q13526" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 71, "end_pos": 71, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine; by DAPK1", "evidence": [ { "database": "UniProtKB", "id": "Q13526", "url": "https://www.uniprot.org/uniprotkb/Q13526" }, { "database": "iPTMnet", "id": "Q13526", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q13526" }, { "database": "PubMed", "id": "21497122", "url": "https://pubmed.ncbi.nlm.nih.gov/21497122" }, { "database": "PubMed", "id": "25849135", "url": "https://pubmed.ncbi.nlm.nih.gov/25849135" }, { "database": "PubMed", "id": "29665256", "url": "https://pubmed.ncbi.nlm.nih.gov/29665256" }, { "database": "PubMed", "id": "35002518", "url": "https://pubmed.ncbi.nlm.nih.gov/35002518" }, { "database": "PubMed", "id": "29686383", "url": "https://pubmed.ncbi.nlm.nih.gov/29686383" } ], "site_lbl": "Ser71", "uniprot_canonical_ac": "Q13526-1" } ], "record_id": "pubmed.35002518", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Stereospecific NANOG PEST Stabilization by Pin1.", "journal": "Biochemistry", "date": "2024-05-07", "authors": "Ferreon Josephine C, Ta Hai Minh, Yun Hyosuk, Choi Kyoung-Jae, Quan My Diem, Tsoi Phoebe S, Kim Choel, Lee Chul Won, Ferreon Allan Chris M", "reference": { "type": "PubMed", "id": "38619104", "url": "https://pubmed.ncbi.nlm.nih.gov/38619104" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13526-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1", "gene_name": "PIN1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13526", "url": "https://www.uniprot.org/uniprotkb/Q13526" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.38619104", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The peptidyl-prolyl isomerase Pin1 controls GM-CSF-induced priming of NADPH oxidase in human neutrophils and priming at inflammatory sites.", "journal": "International immunopharmacology", "date": "2024-08-20", "authors": "Boussetta Tarek, Raad Houssam, Bedouhene Samia, Arabi Derkawi Riad, Gougerot-Pocidalo Marie-Anne, Hayem Gilles, Dang Pham My-Chan, El-Benna Jamel", "reference": { "type": "PubMed", "id": "38851160", "url": "https://pubmed.ncbi.nlm.nih.gov/38851160" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13526-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1", "gene_name": "PIN1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13526", "url": "https://www.uniprot.org/uniprotkb/Q13526" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.38851160", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A human peptidyl-prolyl isomerase essential for regulation of mitosis.", "journal": "Nature", "date": "1996", "authors": "Lu KP, Hanes SD, Hunter T", "reference": { "type": "PubMed", "id": "8606777", "url": "https://pubmed.ncbi.nlm.nih.gov/8606777" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13526-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1", "gene_name": "PIN1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13526", "url": "https://www.uniprot.org/uniprotkb/Q13526" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8606777", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structural and functional analysis of the mitotic rotamase Pin1 suggests substrate recognition is phosphorylation dependent.", "journal": "Cell", "date": "1997", "authors": "Ranganathan R, Lu KP, Hunter T, Noel JP", "reference": { "type": "PubMed", "id": "9200606", "url": "https://pubmed.ncbi.nlm.nih.gov/9200606" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13526-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1", "gene_name": "PIN1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13526", "url": "https://www.uniprot.org/uniprotkb/Q13526" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9200606", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The effect of benzyl isothiocyanate and its computer-aided design derivants targeting alkylglycerone phosphate synthase on the inhibition of human glioma U87MG cell line.", "journal": "Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine", "date": "2015", "authors": "Zhu Y, Liu A, Zhang X, Qi L, Zhang L, Xue J, Liu Y, Yang P", "reference": { "type": "PubMed", "id": "25542233", "url": "https://pubmed.ncbi.nlm.nih.gov/25542233" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O00116-1", "protein_name": "Alkyldihydroxyacetonephosphate synthase, peroxisomal", "gene_name": "AGPS", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O00116", "url": "https://www.uniprot.org/uniprotkb/O00116" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.25542233", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mass Spectrometry and Computer Simulation Predict the Interactions of AGPS and HNRNPK in Glioma.", "journal": "BioMed research international", "date": "2021", "authors": "Zhou W, Liu Y, Li H, Song Z, Ma Y, Zhu Y", "reference": { "type": "PubMed", "id": "34621897", "url": "https://pubmed.ncbi.nlm.nih.gov/34621897" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O00116-1", "protein_name": "Alkyldihydroxyacetonephosphate synthase, peroxisomal", "gene_name": "AGPS", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O00116", "url": "https://www.uniprot.org/uniprotkb/O00116" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.34621897", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "TrkA promotes MDM2-mediated AGPS ubiquitination and degradation to trigger prostate cancer progression.", "journal": "Journal of experimental & clinical cancer research : CR", "date": "2024-01-11", "authors": "Zhang Yu, Huang Zhenlin, Li Keqiang, Xie Guoqing, Feng Yuankang, Wang Zihao, Li Ningyang, Liu Ruoyang, Ding Yinghui, Wang Jun, Yang Jinjian, Jia Zhankui", "reference": { "type": "PubMed", "id": "38200609", "url": "https://pubmed.ncbi.nlm.nih.gov/38200609" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O00116-1", "protein_name": "Alkyldihydroxyacetonephosphate synthase, peroxisomal", "gene_name": "AGPS", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O00116", "url": "https://www.uniprot.org/uniprotkb/O00116" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.38200609", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Nucleotide sequence of human alkyl-dihydroxyacetonephosphate synthase cDNA reveals the presence of a peroxisomal targeting signal 2.", "journal": "Biochim. Biophys. Acta", "date": "1997", "authors": "de Vet E C, van den Broek B T, van den Bosch H", "reference": { "type": "PubMed", "id": "9187299", "url": "https://pubmed.ncbi.nlm.nih.gov/9187299" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O00116-1", "protein_name": "Alkyldihydroxyacetonephosphate synthase, peroxisomal", "gene_name": "AGPS", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O00116", "url": "https://www.uniprot.org/uniprotkb/O00116" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9187299", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Alkyl-dihydroxyacetonephosphate synthase. Fate in peroxisome biogenesis disorders and identification of the point mutation underlying a single enzyme deficiency.", "journal": "The Journal of biological chemistry", "date": "1998", "authors": "de Vet EC, Ijlst L, Oostheim W, Wanders RJ, van den Bosch H", "reference": { "type": "PubMed", "id": "9553082", "url": "https://pubmed.ncbi.nlm.nih.gov/9553082" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O00116-1", "protein_name": "Alkyldihydroxyacetonephosphate synthase, peroxisomal", "gene_name": "AGPS", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O00116", "url": "https://www.uniprot.org/uniprotkb/O00116" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9553082", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] } ]