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Biochemical journal", "date": "2014-09-15", "authors": "Solari Clara Andrea, Tudisca Vanesa, Pugliessi Marcelo, Nadra Alejandro Daniel, Moreno Silvia, Portela Paula", "reference": { "type": "PubMed", "id": "24947305", "url": "https://pubmed.ncbi.nlm.nih.gov/24947305" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P06244-1", "protein_name": "cAMP-dependent protein kinase type 1", "gene_name": "TPK1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P06244", "url": "https://www.uniprot.org/uniprotkb/P06244" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "phosphorylation": [ { "start_pos": 179, "end_pos": 179, "kinase_uniprot_canonical_ac": "P06244-1", "kinase_gene_name": "TPK1", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "P06244", 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Biol. Chem.", "date": "1987", "authors": "Lisziewicz J, Godany A, F\u00f6rster H H, K\u00fcntzel H", "reference": { "type": "PubMed", "id": "3546292", "url": "https://pubmed.ncbi.nlm.nih.gov/3546292" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P06244-1", "protein_name": "cAMP-dependent protein kinase type 1", "gene_name": "TPK1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P06244", "url": "https://www.uniprot.org/uniprotkb/P06244" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.3546292", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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Biol.", "date": "2000", "authors": "Roy N, Runge K W", "reference": { "type": "PubMed", "id": "10662670", "url": "https://pubmed.ncbi.nlm.nih.gov/10662670" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P06700-1", "protein_name": "NAD-dependent histone deacetylase SIR2", "gene_name": "SIR2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P06700", "url": "https://www.uniprot.org/uniprotkb/P06700" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.10662670", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] 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Natl. Acad. Sci. U.S.A.", "date": "1997", "authors": "Moazed D, Kistler A, Axelrod A, Rine J, Johnson A D", "reference": { "type": "PubMed", "id": "9122169", "url": "https://pubmed.ncbi.nlm.nih.gov/9122169" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P06700-1", "protein_name": "NAD-dependent histone deacetylase SIR2", "gene_name": "SIR2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P06700", "url": "https://www.uniprot.org/uniprotkb/P06700" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.9122169", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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Cell Biol.", "date": "1996", "authors": "Stone E M, Pillus L", "reference": { "type": "PubMed", "id": "8909534", "url": "https://pubmed.ncbi.nlm.nih.gov/8909534" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P06701-1", "protein_name": "Regulatory protein SIR3", "gene_name": "SIR3", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P06701", "url": "https://www.uniprot.org/uniprotkb/P06701" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.8909534", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mps3p is a novel component of the yeast spindle pole body that interacts with the yeast centrin homologue Cdc31p.", "journal": "The Journal of cell biology", "date": "2002-12-23", "authors": "Jaspersen Sue L, Giddings Thomas H, Winey Mark", "reference": { "type": "PubMed", "id": "12486115", "url": "https://pubmed.ncbi.nlm.nih.gov/12486115" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P06704-1", "protein_name": "Cell division control protein 31", "gene_name": "CDC31", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P47069-1", "protein_name": "Spindle pole body assembly component MPS3", "gene_name": "MPS3", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P06704", "url": "https://www.uniprot.org/uniprotkb/P06704" } ], "common_name": "Baker's yeast", "glygen_name": 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Cell Biol.", "date": "1995", "authors": "Spang A, Courtney I, Grein K, Matzner M, Schiebel E", "reference": { "type": "PubMed", "id": "7876310", "url": "https://pubmed.ncbi.nlm.nih.gov/7876310" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P06704-1", "protein_name": "Cell division control protein 31", "gene_name": "CDC31", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P11927-1", "protein_name": "Cell division control protein KAR1", "gene_name": "KAR1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P06704", "url": "https://www.uniprot.org/uniprotkb/P06704" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.7876310", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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Biol. Chem.", "date": "1996", "authors": "Guzder S N, Sung P, Prakash L, Prakash S", "reference": { "type": "PubMed", "id": "8621533", "url": "https://pubmed.ncbi.nlm.nih.gov/8621533" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P06777-1", "protein_name": "DNA repair protein RAD1", "gene_name": "RAD1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P06838-1", "protein_name": "DNA repair protein RAD10", "gene_name": "RAD10", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P28519-1", "protein_name": "DNA repair protein RAD14", "gene_name": "RAD14", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P06777", "url": "https://www.uniprot.org/uniprotkb/P06777" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.8621533", "abstract": "", 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Biol. 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Biol.", "date": "1989", "authors": "Celenza J L, Eng F J, Carlson M", "reference": { "type": "PubMed", "id": "2481228", "url": "https://pubmed.ncbi.nlm.nih.gov/2481228" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P06782-1", "protein_name": "Carbon catabolite-derepressing protein kinase", "gene_name": "SNF1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P12904-1", "protein_name": "5'-AMP-activated protein kinase subunit gamma", "gene_name": "SNF4", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P06782", "url": "https://www.uniprot.org/uniprotkb/P06782" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.2481228", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] } ]