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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "PSGL-1 decorated with sialyl Lewisa/x promotes high affinity binding of myeloma cells to P-selectin but is dispensable for E-selectin engagement.", "journal": "Scientific reports", "date": "2024-01-19", "authors": "O'Dwyer Michael, Kirkham-McCarthy Lucy, Cerreto Marina, Fo\u00e0 Robin, Natoni Alessandro", "reference": { "type": "PubMed", "id": "38243063", "url": "https://pubmed.ncbi.nlm.nih.gov/38243063" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16109-1", "protein_name": "P-selectin", "gene_name": "SELP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14242-1", "protein_name": "P-selectin glycoprotein ligand 1", "gene_name": "SELPLG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16581-1", "protein_name": "E-selectin", "gene_name": "SELE", "tax_name": "Human" } ], "species": [ { "name": "Homo 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[] } ] }, { "title": "Knowledge-based model building of proteins: concepts and examples.", "journal": "Protein Sci.", "date": "1993", "authors": "Bajorath J, Stenkamp R, Aruffo A", "reference": { "type": "PubMed", "id": "7505680", "url": "https://pubmed.ncbi.nlm.nih.gov/7505680" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16109-1", "protein_name": "P-selectin", "gene_name": "SELP", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P16109", "url": "https://www.uniprot.org/uniprotkb/P16109" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7505680", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Tyrosine sulfation of P-selectin glycoprotein ligand-1 is required for high affinity binding to P-selectin.", "journal": "J. Biol. Chem.", "date": "1995", "authors": "Wilkins PP, Moore KL, McEver RP, Cummings RD", "reference": { "type": "PubMed", "id": "7559387", "url": "https://pubmed.ncbi.nlm.nih.gov/7559387" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16109-1", "protein_name": "P-selectin", "gene_name": "SELP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14242-1", "protein_name": "P-selectin glycoprotein ligand 1", "gene_name": "SELPLG", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P16109", "url": "https://www.uniprot.org/uniprotkb/P16109" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7559387", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A sulfated peptide segment at the amino terminus of PSGL-1 is critical for P-selectin binding.", "journal": "Cell", "date": "1995", "authors": "Sako D, Comess KM, Barone KM, Camphausen RT, Cumming DA, Shaw GD", "reference": { "type": "PubMed", "id": "7585949", "url": "https://pubmed.ncbi.nlm.nih.gov/7585949" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16109-1", "protein_name": "P-selectin", "gene_name": "SELP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14242-1", "protein_name": "P-selectin glycoprotein ligand 1", "gene_name": "SELPLG", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P16109", "url": "https://www.uniprot.org/uniprotkb/P16109" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 46, "end_pos": 52, "sequence_org": "YEYLDYD", "sequence_mut": "FEFLDFE", "comment": "No sulfation. Almost complete loss of P-selectin binding. No effect on E-selectin binding.", "evidence": [ { "database": "UniProtKB", "id": "Q14242", "url": "https://www.uniprot.org/uniprotkb/Q14242" }, { "database": "PubMed", "id": "7585949", "url": "https://pubmed.ncbi.nlm.nih.gov/7585949" } ], "uniprot_canonical_ac": "Q14242-1" } ], "record_id": "pubmed.7585949", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "PSGL-1 recognition of P-selectin is controlled by a tyrosine sulfation consensus at the PSGL-1 amino terminus.", "journal": "Cell", "date": "1995", "authors": "Pouyani T, Seed B", "reference": { "type": "PubMed", "id": "7585950", "url": "https://pubmed.ncbi.nlm.nih.gov/7585950" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16109-1", "protein_name": "P-selectin", "gene_name": "SELP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14242-1", "protein_name": "P-selectin glycoprotein ligand 1", "gene_name": "SELPLG", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P16109", "url": "https://www.uniprot.org/uniprotkb/P16109" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 46, "end_pos": 46, "sequence_org": "Y", "sequence_mut": "F", "comment": "Binding L-selectin reduced by 20%, neutrophil recruitment reduced by 30%, and lymphocyte rolling reduced by 32%; when associated with F-48. Binding L-selectin reduced by 86%, neutrophil recruitment reduced by 75%, and lymphocyte rolling reduced by 69%; when associated with F-51. Binding L-selectin reduced by 89%, and neutrophil recruitment reduced by 90%; when associated with F-48 and F-51. Binding of L-selectin reduced by 91%; when associated with F-48; F-51 and A-57.", "evidence": [ { "database": "UniProtKB", "id": "Q14242", "url": "https://www.uniprot.org/uniprotkb/Q14242" }, { "database": "PubMed", "id": "7585950", "url": "https://pubmed.ncbi.nlm.nih.gov/7585950" } ], "uniprot_canonical_ac": "Q14242-1" }, { "start_pos": 48, "end_pos": 48, "sequence_org": "Y", "sequence_mut": "F", "comment": "Binding L-selectin reduced by 20%, neutrophil recruitment reduced by 30%, and lymphocyte rolling reduced by 32%; when associated with F-46. Binding L-lectin reduced by 31%, neutrophil recruitment reduced by 52%, and lymphocyte rolling reduced by 52%; when associated with F-51. Binding L-selectin reduced by 89%, and neutrophil recruitment reduced by 90%; when associated with F-46 and F-51. Binding of L-selectin reduced by 91%; when associated with F-46; F-51 and A-57.", "evidence": [ { "database": "UniProtKB", "id": "Q14242", "url": "https://www.uniprot.org/uniprotkb/Q14242" }, { "database": "PubMed", "id": "7585950", "url": "https://pubmed.ncbi.nlm.nih.gov/7585950" }, { "database": "PubMed", "id": "12403782", "url": "https://pubmed.ncbi.nlm.nih.gov/12403782" } ], "uniprot_canonical_ac": "Q14242-1" }, { "start_pos": 51, "end_pos": 51, "sequence_org": "Y", "sequence_mut": "F", "comment": "Binding L-selectin reduced by 86%, neutrophil recruitment reduced by 75% and, lymphocyte rolling reduced by 69%; when associated with F-46. Binding L-selectin reduced by 31%, neutrophil recruitment reduced by 52%, and lymphocyte rolling reduced by 52%; when associated with F-48; Binding L-selectin reduced by 89%, and neutrophil recruitment reduced by 90%; when associated with F-46 and F-48. Binding of L-selectin reduced by 91%; when associated with F-46; F-48 and A-57.", "evidence": [ { "database": "UniProtKB", "id": "Q14242", "url": "https://www.uniprot.org/uniprotkb/Q14242" }, { "database": "PubMed", "id": "7585950", "url": "https://pubmed.ncbi.nlm.nih.gov/7585950" }, { "database": "PubMed", "id": "12403782", "url": "https://pubmed.ncbi.nlm.nih.gov/12403782" } ], "uniprot_canonical_ac": "Q14242-1" }, { "start_pos": 57, "end_pos": 57, "sequence_org": "T", "sequence_mut": "A", "comment": "No E- nor P-selectin binding, and very little neutrophil rolling. 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Biol. Chem.", "date": "1993", "authors": "Fujimoto T, Stroud E, Whatley R E, Prescott S M, Muszbek L, Laposata M, McEver R P", "reference": { "type": "PubMed", "id": "7684381", "url": "https://pubmed.ncbi.nlm.nih.gov/7684381" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16109-1", "protein_name": "P-selectin", "gene_name": "SELP", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P16109", "url": "https://www.uniprot.org/uniprotkb/P16109" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7684381", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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Implications for the use of unfractionated and low molecular weight heparins as therapeutic agents.", "journal": "The Journal of clinical investigation", "date": "1998", "authors": "Koenig A, Norgard-Sumnicht K, Linhardt R, Varki A", "reference": { "type": "PubMed", "id": "9466983", "url": "https://pubmed.ncbi.nlm.nih.gov/9466983" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P16109-1", "protein_name": "P-selectin", "gene_name": "SELP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14151-1", "protein_name": "L-selectin", "gene_name": "SELL", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P16109", "url": "https://www.uniprot.org/uniprotkb/P16109" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9466983", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The P-selectin gene is highly polymorphic: reduced frequency of the Pro715 allele carriers in patients with myocardial infarction.", "journal": "Hum. 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Mutations in brief no. 183. Online.", "journal": "Human mutation", "date": "1998", "authors": "Evans D, Wendt D, Ahle S, Guerra A, Beisiegel U", "reference": { "type": "PubMed", "id": "10660334", "url": "https://pubmed.ncbi.nlm.nih.gov/10660334" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P06858-1", "protein_name": "Lipoprotein lipase", "gene_name": "LPL", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P06858", "url": "https://www.uniprot.org/uniprotkb/P06858" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10660334", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Two novel mutations in the lipoprotein lipase gene in a family with marked hypertriglyceridemia in heterozygous carriers. Potential interaction with the polymorphic marker D1S104 on chromosome 1q21-q23.", "journal": "Journal of lipid research", "date": "2000", "authors": "Holzl B, Kraft HG, Wiebusch H, Sandhofer A, Patsch J, Sandhofer F, Paulweber B", "reference": { "type": "PubMed", "id": "10787434", "url": "https://pubmed.ncbi.nlm.nih.gov/10787434" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P06858-1", "protein_name": "Lipoprotein lipase", "gene_name": "LPL", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P06858", "url": "https://www.uniprot.org/uniprotkb/P06858" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10787434", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": 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since 1996--.", "journal": "Journal of atherosclerosis and thrombosis", "date": "2004", "authors": "Maruyama T, Yamashita S, Matsuzawa Y, Bujo H, Takahashi K, Saito Y, Ishibashi S, Ohashi K, Shionoiri F, Gotoda T, Yamada N, Kita T", "reference": { "type": "PubMed", "id": "15256764", "url": "https://pubmed.ncbi.nlm.nih.gov/15256764" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P06858-1", "protein_name": "Lipoprotein lipase", "gene_name": "LPL", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P06858", "url": "https://www.uniprot.org/uniprotkb/P06858" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15256764", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": 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[] } ] }, { "title": "A missense mutation (Asp250----Asn) in exon 6 of the human lipoprotein lipase gene causes chylomicronemia in patients of different ancestries.", "journal": "Genomics", "date": "1992", "authors": "Ma Y, Wilson BI, Bijvoet S, Henderson HE, Cramb E, Roederer G, Ven Murthy MR, Julien P, Bakker HD, Kastelein JJ, et al.", "reference": { "type": "PubMed", "id": "1639392", "url": "https://pubmed.ncbi.nlm.nih.gov/1639392" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P06858-1", "protein_name": "Lipoprotein lipase", "gene_name": "LPL", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P06858", "url": "https://www.uniprot.org/uniprotkb/P06858" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.1639392", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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In vivo evidence that aspartic acid 156 is essential for catalysis.", "journal": "The Journal of biological chemistry", "date": "1992", "authors": "Ma YH, Bruin T, Tuzgol S, Wilson BI, Roederer G, Liu MS, Davignon J, Kastelein JJ, Brunzell JD, Hayden MR", "reference": { "type": "PubMed", "id": "1730727", "url": "https://pubmed.ncbi.nlm.nih.gov/1730727" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P06858-1", "protein_name": "Lipoprotein lipase", "gene_name": "LPL", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P06858", "url": "https://www.uniprot.org/uniprotkb/P06858" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.1730727", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": 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Co-inheritance with a nonsense mutation (Ser447----Ter) in a Turkish family.", "journal": "The Journal of biological chemistry", "date": "1991", "authors": "Faustinella F, Chang A, Van Biervliet JP, Rosseneu M, Vinaimont N, Smith LC, Chen SH, Chan L", "reference": { "type": "PubMed", "id": "1907278", "url": "https://pubmed.ncbi.nlm.nih.gov/1907278" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P06858-1", "protein_name": "Lipoprotein lipase", "gene_name": "LPL", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P06858", "url": "https://www.uniprot.org/uniprotkb/P06858" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.1907278", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { 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filters: n-glyco-sequon-gain (NQA->NQT).", "chr_id": "8", "chr_pos": "19959322", "ref_nt": "A", "alt_nt": "null", "minor_allelic_frequency": "", "site_lbl": "A361", "disease": [ { "disease_id": "DOID:13809", "recommended_name": { "id": "DOID:13809", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:13809", "name": "familial combined hyperlipidemia", "description": "" }, "synonyms": [ { "id": "DOID:13809", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:13809", "name": "familial multiple lipoprotein-type hyperlipidemia", "description": "" }, { "id": "DOID:13809", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:13809", "name": "mixed hyperlipidaemia", "description": "" }, { "id": "DOID:13809", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:13809", "name": "type IIb hyperlipoproteinemia", "description": "" }, { "id": "DOID:13809", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:13809", "name": "hyperbetalipoproteinemia with prebetalipoproteinemia", "description": "" }, { "id": "MONDO:0007759", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007759", "name": "hyperlipidemia, familial combined, LPL related", "description": "" }, { "id": "MONDO:0007759", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007759", "name": "combined hyperlipidemia, familial", "description": "" }, { "id": "MONDO:0007759", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007759", "name": "FCHL", "description": "" }, { "id": "MONDO:0007759", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0007759", "name": "hyperlipidemia, familial combined", "description": "" }, { "id": "MIM:144250", "resource": "MIM", "url": "https://www.omim.org/entry/144250", "name": "Hyperlipidemia, familial combined, 3", "description": "Hyperlipidemia, familial combined, 3" } ], "unlinked_id_list": [], "evidence": [ { "id": "13809", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:13809" } ] }, { "disease_id": "DOID:14118", "recommended_name": { "id": "DOID:14118", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:14118", "name": "familial lipoprotein lipase deficiency", "description": "A familial hyperlipemia characterized by a deficiency of the enzyme lipoprotein lipase and the subsequent build up of chylomicrons and increased plasma concentration of triglycerides." }, "synonyms": [ { "id": "DOID:14118", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:14118", "name": "Fredrickson type I hyperlipoproteinemia", "description": "" }, { "id": "DOID:14118", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:14118", "name": "Fredrickson type I lipaemia", "description": "" }, { "id": "DOID:14118", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:14118", "name": "familial LPL deficiency", "description": "" }, { "id": "DOID:14118", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:14118", "name": "familial hyperlipoproteinemia type I", "description": "" }, { "id": "DOID:14118", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:14118", "name": "hypercholesterinaemic xanthomatosis", "description": "" }, { "id": "DOID:14118", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:14118", "name": "hyperchylomicronemia", "description": "" }, { "id": "DOID:14118", "resource": "Disease Ontology", "url": "https://disease-ontology.org/term/DOID:14118", "name": "mixed hyperglyceridemia", "description": "" }, { "id": "MONDO:0009387", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009387", "name": "familial lipoprotein lipase deficiency", "description": "Familial lipoprotein lipase deficiency is a rare genetic disorder is which a person lacks the enzyme lipoprotein lipase, a protein needed to break down fat molecules. Deficiency of this enzyme prevents affected individuals from properly digesting certain fats. This results in the accumulation of fatty droplets called chylomicrons in the blood and an increase in the blood concentration of triglycerides. Symptoms include episodes of abdominal pain, recurrent inflammation of the pancreas (pancreatitis), abnormal enlargement of the liver and/or spleen (hepatosplenomegaly), and the development of skin lesions known as erruptive xanthomas. Familial lipoprotein lipase deficiency is caused by changes (mutations) in the LPL gene. It is inherited in an autosomal recessive pattern. Treatment aims to control symptoms and blood triglyceride levels with a very low-fat diet. Treatment for individual symptoms (i.e. pancreatitis) involves following established treatment guidelines." }, { "id": "MONDO:0009387", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009387", "name": "familial chylomicronemia syndrome", "description": "" }, { "id": "MONDO:0009387", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009387", "name": "hyperlipoproteinemia type I", "description": "" }, { "id": "MONDO:0009387", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009387", "name": "hyperlipoproteinemia, type 1", "description": "" }, { "id": "MONDO:0009387", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009387", "name": "hyperlipoproteinemia, type I", "description": "" }, { "id": "MONDO:0009387", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009387", "name": "type I hyperlipoproteinemia", "description": "" }, { "id": "MONDO:0009387", "resource": 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[] } ] }, { "title": "A new Italian case of lipoprotein lipase deficiency: a Leu365- > Val change resulting in loss of enzyme activity.", "journal": "Biochemical and biophysical research communications", "date": "1994", "authors": "Pepe G, Chimienti G, Resta F, Di Perna V, Tarricone C, Lovecchio M, Colacicco AM, Capurso A", "reference": { "type": "PubMed", "id": "8135797", "url": "https://pubmed.ncbi.nlm.nih.gov/8135797" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P06858-1", "protein_name": "Lipoprotein lipase", "gene_name": "LPL", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P06858", "url": "https://www.uniprot.org/uniprotkb/P06858" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8135797", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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Chem.", "date": "1994", "authors": "van Tilbeurgh H, Roussel A, Lalouel J M, Cambillau C", "reference": { "type": "PubMed", "id": "8308035", "url": "https://pubmed.ncbi.nlm.nih.gov/8308035" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P06858-1", "protein_name": "Lipoprotein lipase", "gene_name": "LPL", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P06858", "url": "https://www.uniprot.org/uniprotkb/P06858" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8308035", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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