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Immunol.", "date": "1992", "authors": "Motoyama N, Okada N, Yamashina M, Okada H", "reference": { "type": "PubMed", "id": "1382994", "url": "https://pubmed.ncbi.nlm.nih.gov/1382994" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P13987", "url": "https://www.uniprot.org/uniprotkb/P13987" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.1382994", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Gene structure of human CD59 and demonstration that discrete mRNAs are generated by alternative polyadenylation.", "journal": "J. 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Biol.", "date": "1992", "authors": "Tone M, Walsh L A, Waldmann H", "reference": { "type": "PubMed", "id": "1383553", "url": "https://pubmed.ncbi.nlm.nih.gov/1383553" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P13987", "url": "https://www.uniprot.org/uniprotkb/P13987" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.1383553", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The CD59 antigen is a structural homologue of murine Ly-6 antigens but lacks interferon inducibility.", "journal": "Eur. 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"Human protectin (CD59), an 18,000-20,000 MW complement lysis restricting factor, inhibits C5b-8 catalysed insertion of C9 into lipid bilayers.", "journal": "Immunology", "date": "1990-09", "authors": "Meri S, Morgan B P, Davies A, Daniels R H, Olavesen M G, Waldmann H, Lachmann P J", "reference": { "type": "PubMed", "id": "1698710", "url": "https://pubmed.ncbi.nlm.nih.gov/1698710" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P13987", "url": "https://www.uniprot.org/uniprotkb/P13987" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.1698710", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "20 KDa homologous restriction factor of complement resembles T cell activating protein.", "journal": "Biochemical and biophysical research communications", "date": "1989-08-15", "authors": "Okada H, Nagami Y, Takahashi K, Okada N, Hideshima T, Takizawa H, Kondo J", "reference": { "type": "PubMed", "id": "2475111", "url": "https://pubmed.ncbi.nlm.nih.gov/2475111" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P13987", "url": "https://www.uniprot.org/uniprotkb/P13987" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.2475111", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", 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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "CD59, an LY-6-like protein expressed in human lymphoid cells, regulates the action of the complement membrane attack complex on homologous cells.", "journal": "The Journal of experimental medicine", "date": "1989-09-01", "authors": "Davies A, Simmons D L, Hale G, Harrison R A, Tighe H, Lachmann P J, Waldmann H", "reference": { "type": "PubMed", "id": "2475570", "url": "https://pubmed.ncbi.nlm.nih.gov/2475570" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P13987", "url": "https://www.uniprot.org/uniprotkb/P13987" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.2475570", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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"G32437SG" }, { "glytoucan_ac": "G32586BA" } ], "referenced_proteins": [ { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P13987", "url": "https://www.uniprot.org/uniprotkb/P13987" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "glycosylation": [ { "glytoucan_ac": "G00176HZ", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "Asn43", "icn3d_view": {}, "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1110000000.010100000001001000.10000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G07483YN", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: Asn43 ; Asn43", "icn3d_view": {}, "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1110000000.000000100001101000.10000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G08520NM", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "Asn43", "icn3d_view": {}, "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1100000000.010100000001001000.10000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G14882EB", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "Asn43", "icn3d_view": {}, "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0010000.1110000000.000000000001000000.00001.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G16828VN", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "Asn43", "icn3d_view": {}, "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1100000000.010100000001001000.10000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G22768VO", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: Asn43 ; Asn43", "icn3d_view": {}, "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "001000000000000000000.0000000.00010000000000.1000000.1100000000.111100100111111101.10000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G27919IH", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: Asn43 ; Asn43", "icn3d_view": {}, "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1110000000.010100000001111000.10000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G36134VO", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: Asn43 ; Asn43", "icn3d_view": {}, "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0010000.1110000000.000000000001001000.00001.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G36191CD", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "Asn43", "icn3d_view": {}, "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1100000000.010100000001111000.10000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G39213VZ", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "Asn43", "icn3d_view": {}, "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1100000000.010100100001111100.10000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G40124HY", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: Asn43 ; Asn43", "icn3d_view": {}, "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0010000.1110000000.000100000001001000.00001.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G41405QQ", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: Asn43 ; Asn43", "icn3d_view": {}, "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0001000.1110000000.000000000001000000.00001.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G44413JJ", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1110000000.010100000001111000.00001.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G55220VL", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "Asn43", "icn3d_view": {}, "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1100000000.110100100011111110.10000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G58667NI", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "Asn43", "icn3d_view": {}, "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1110000000.010000000001111000.10000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G61207RZ", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: Asn43 ; Asn43", "icn3d_view": {}, "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1110000000.010100000011001000.10000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G61505ZR", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0010000.1110000000.000000000001010000.00001.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G63640QH", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1100000000.010000000001101000.00001.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G63889NK", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. Reported structure can be attached to the following: Asn43 ; Asn43", "icn3d_view": {}, "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0010000.1110000000.000000000011111000.10000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G71919QK", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "Asn43", "icn3d_view": {}, "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0010000.1110000000.000000000001000000.00001.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G77149EE", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "Asn43", "icn3d_view": {}, "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0010000.1110000000.000000000001011000.00001.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G78059CC", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "Asn43", "icn3d_view": {}, "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1110000000.010100000001111000.10000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G80858MF", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "Asn43", "icn3d_view": {}, "start_pos": 43, "start_aa": "Asn", "end_pos": 43, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn43", "evidence": [ { "id": "10207177", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/10207177" }, { "id": "GLY_000040", "database": "UniCarbKB", "url": "http://data.glygen.org/GLY_000040" }, { "id": "7514386", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/7514386" } ], "filter_code": "001000000000000000000.0000000.00010000000000.0100000.1110000000.010100100001111000.10000.01001", "uniprot_canonical_ac": "P13987-1" }, { "glytoucan_ac": "G80966KZ", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "N", "relation": "attached", "comment": "GlycoSuiteDB curation notes. 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"count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structure of a soluble, glycosylated form of the human complement regulatory protein CD59.", "journal": "Structure", "date": "1994", "authors": "Fletcher C M, Harrison R A, Lachmann P J, Neuhaus D", "reference": { "type": "PubMed", "id": "7520819", "url": "https://pubmed.ncbi.nlm.nih.gov/7520819" }, 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"total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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Biochem.", "date": "1993", "authors": "Sugita Y, Nakano Y, Oda E, Noda K, Tobe T, Miura N H, Tomita M", "reference": { "type": "PubMed", "id": "8276756", "url": "https://pubmed.ncbi.nlm.nih.gov/8276756" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P13987", "url": "https://www.uniprot.org/uniprotkb/P13987" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8276756", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"Mutational analysis of the active site and antibody epitopes of the complement-inhibitory glycoprotein, CD59.", "journal": "The Journal of experimental medicine", "date": "1997", "authors": "Bodian DL, Davis SJ, Morgan BP, Rushmere NK", "reference": { "type": "PubMed", "id": "9053451", "url": "https://pubmed.ncbi.nlm.nih.gov/9053451" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P13987", "url": "https://www.uniprot.org/uniprotkb/P13987" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 29, "end_pos": 29, "sequence_org": "Y", "sequence_mut": "R", "comment": "No loss of function.", "evidence": [ { "database": "UniProtKB", "id": "P13987", "url": 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Lysis.", "evidence": [ { "database": "UniProtKB", "id": "P13987", "url": "https://www.uniprot.org/uniprotkb/P13987" }, { "database": "PubMed", "id": "9053451", "url": "https://pubmed.ncbi.nlm.nih.gov/9053451" } ], "uniprot_canonical_ac": "P13987-1" }, { "start_pos": 82, "end_pos": 82, "sequence_org": "N", "sequence_mut": "K", "comment": "No loss of function.", "evidence": [ { "database": "UniProtKB", "id": "P13987", "url": "https://www.uniprot.org/uniprotkb/P13987" }, { "database": "PubMed", "id": "9053451", "url": "https://pubmed.ncbi.nlm.nih.gov/9053451" } ], "uniprot_canonical_ac": "P13987-1" }, { "start_pos": 87, "end_pos": 87, "sequence_org": "Y", "sequence_mut": "R", "comment": "No loss of function.", "evidence": [ { "database": "UniProtKB", "id": "P13987", "url": "https://www.uniprot.org/uniprotkb/P13987" }, { "database": "PubMed", "id": "9053451", "url": "https://pubmed.ncbi.nlm.nih.gov/9053451" } ], "uniprot_canonical_ac": "P13987-1" } ], "record_id": "pubmed.9053451", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The glycosylation of the complement regulatory protein, human erythrocyte CD59.", "journal": "J. Biol. Chem.", "date": "1997", "authors": "Rudd P M, Morgan B P, Wormald M R, Harvey D J, van den Berg C W, Davis S J, Ferguson M A, Dwek R A", "reference": { "type": "PubMed", "id": "9054419", "url": "https://pubmed.ncbi.nlm.nih.gov/9054419" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P13987", "url": "https://www.uniprot.org/uniprotkb/P13987" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9054419", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mapping the regions of the complement inhibitor CD59 responsible for its species selective activity.", "journal": "Biochemistry", "date": "1997", "authors": "Yu J, Dong S, Rushmere N K, Morgan B P, Abagyan R, Tomlinson S", "reference": { "type": "PubMed", "id": "9235986", "url": "https://pubmed.ncbi.nlm.nih.gov/9235986" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P13987", "url": "https://www.uniprot.org/uniprotkb/P13987" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9235986", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", 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Immunol.", "date": "2005", "authors": "Szymczak Andrea L, Workman Creg J, Gil Diana, Dilioglou Smaroula, Vignali Kate M, Palmer Ed, Vignali Dario A A", "reference": { "type": "PubMed", "id": "15972658", "url": "https://pubmed.ncbi.nlm.nih.gov/15972658" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P07766-1", "protein_name": "T-cell surface glycoprotein CD3 epsilon chain", "gene_name": "CD3E", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P07766", "url": "https://www.uniprot.org/uniprotkb/P07766" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15972658", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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U.S.A.", "date": "1988", "authors": "Clevers H C, Dunlap S, Wileman T E, Terhorst C", "reference": { "type": "PubMed", "id": "3267235", "url": "https://pubmed.ncbi.nlm.nih.gov/3267235" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P07766-1", "protein_name": "T-cell surface glycoprotein CD3 epsilon chain", "gene_name": "CD3E", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P07766", "url": "https://www.uniprot.org/uniprotkb/P07766" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.3267235", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Humanization of a strategic CD3 epitope enables evaluation of clinical T-cell engagers in a fully immunocompetent in vivo model.", "journal": "Scientific reports", "date": "2022-03-03", "authors": "Zorn Julie A, Wheeler Matthew L, Barnes Ralston M, Kaberna Jim, Morishige Winse, Harris Marek, Huang Richard Y-C, Lohre Jack, Chang Yu Ching, Chau Bryant, Powers Kathleen, Schindler Ian, Neradugomma Naveen, Thomas Winston, Liao Xiaoyun, Zhou Yinhan, West Sean M, Wang Feng, Kotapati Srikanth, Chen Guodong, Yamazoe Sayumi, Kosenko Anastasia, Dollinger Gavin, Sproul Tim, Rajpal Arvind, Strop Pavel", "reference": { "type": "PubMed", "id": "35241687", "url": "https://pubmed.ncbi.nlm.nih.gov/35241687" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P07766-1", "protein_name": "T-cell surface glycoprotein CD3 epsilon chain", "gene_name": "CD3E", "tax_name": "Human" } ], "species": [ { "name": 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Immunol.", "date": "1994", "authors": "Ha H, Barnoski B L, Sun L, Emanuel B S, Burrows P D", "reference": { "type": "PubMed", "id": "8207205", "url": "https://pubmed.ncbi.nlm.nih.gov/8207205" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P11912-1", "protein_name": "B-cell antigen receptor complex-associated protein alpha chain", "gene_name": "CD79A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P11912", "url": "https://www.uniprot.org/uniprotkb/P11912" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8207205", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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Biol.", "date": "2010", "authors": "Bird Louise E, Ren Jingshan, Nettleship Joanne E, Folkers Gert E, Owens Raymond J, Stammers David K", "reference": { "type": "PubMed", "id": "20509910", "url": "https://pubmed.ncbi.nlm.nih.gov/20509910" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UKY1-1", "protein_name": "Zinc fingers and homeoboxes protein 1", "gene_name": "ZHX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6X8-1", "protein_name": "Zinc fingers and homeoboxes protein 2", "gene_name": "ZHX2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UKY1", "url": "https://www.uniprot.org/uniprotkb/Q9UKY1" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20509910", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { 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Interactions with the proposed post-endocytic sorting proteins ERM-binding phosphoprotein 50 (EBP50), N-ethylmaleimide-sensitive factor (NSF), sorting nexin 1 (SNX1), and G protein-coupled receptor-associated sorting protein (GASP).", "journal": "The Journal of biological chemistry", "date": "2004", "authors": "Heydorn A, Sondergaard BP, Ersboll B, Holst B, Nielsen FC, Haft CR, Whistler J, Schwartz TW", "reference": { "type": "PubMed", "id": "15452121", "url": "https://pubmed.ncbi.nlm.nih.gov/15452121" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q5JY77-1", "protein_name": "G protein-coupled receptor-associated sorting protein 1", "gene_name": "GPRASP1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q5JY77", "url": "https://www.uniprot.org/uniprotkb/Q5JY77" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15452121", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Downregulation of 5-HT7 Serotonin Receptors by the Atypical Antipsychotics Clozapine and Olanzapine. 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