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RGLG4.", "journal": "Journal of experimental botany", "date": "2015-05", "authors": "Zhang Xu, Wu Qian, Cui Shao, Ren Jiao, Qian Wanqiang, Yang Yang, He Shanping, Chu Jinfang, Sun Xiaohong, Yan Cunyu, Yu Xiangchun, An Chengcai", "reference": { "type": "PubMed", "id": "25788731", "url": "https://pubmed.ncbi.nlm.nih.gov/25788731" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8RX26-1", "protein_name": "E3 ubiquitin-protein ligase RGLG3", "gene_name": "RGLG3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SAL0-1", "protein_name": "E3 ubiquitin-protein ligase RGLG4", "gene_name": "RGLG4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8RX26", "url": "https://www.uniprot.org/uniprotkb/Q8RX26" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": 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Siyi, DeBrosse Taylor, Poirier Emily, Emch Kirk, Soukup Eric, Tian Lu, Showalter Allan M", "reference": { "type": "PubMed", "id": "25974423", "url": "https://pubmed.ncbi.nlm.nih.gov/25974423" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8RX55-1", "protein_name": "Hydroxyproline O-galactosyltransferase GALT5", "gene_name": "GALT5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A7XDQ9-1", "protein_name": "Hydroxyproline O-galactosyltransferase GALT2", "gene_name": "GALT2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8RX55", "url": "https://www.uniprot.org/uniprotkb/Q8RX55" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.25974423", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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"Characterization of Arabidopsis thaliana ortholog of the human breast cancer susceptibility gene 1: AtBRCA1, strongly induced by gamma rays.", "journal": "Nucleic Acids Res.", "date": "2003", "authors": "Lafarge S, Montan\u00e9 M-H", "reference": { "type": "PubMed", "id": "12582233", "url": "https://pubmed.ncbi.nlm.nih.gov/12582233" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8RXD4-1", "protein_name": "Protein BREAST CANCER SUSCEPTIBILITY 1 homolog", "gene_name": "BRCA1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8RXD4", "url": "https://www.uniprot.org/uniprotkb/Q8RXD4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12582233", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": 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in the cytosol of photosynthetic cells.", "journal": "Planta", "date": "2004", "authors": "Lu Yan, Sharkey Thomas D", "reference": { "type": "PubMed", "id": "14593480", "url": "https://pubmed.ncbi.nlm.nih.gov/14593480" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8RXD9-1", "protein_name": "4-alpha-glucanotransferase DPE2", "gene_name": "DPE2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8RXD9", "url": "https://www.uniprot.org/uniprotkb/Q8RXD9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.14593480", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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"Panikashvili David, Shi Jian Xin, Bocobza Samuel, Franke Rochus Benni, Schreiber Lukas, Aharoni Asaph", "reference": { "type": "PubMed", "id": "20035035", "url": "https://pubmed.ncbi.nlm.nih.gov/20035035" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8RXN0-1", "protein_name": "ABC transporter G family member 11", "gene_name": "ABCG11", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8RXN0", "url": "https://www.uniprot.org/uniprotkb/Q8RXN0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.20035035", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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identification of touch-induced genes from an ethylene-insensitive Arabidopsis mutant and partial characterization of these genes.", "journal": "J. Plant Physiol.", "date": "2006", "authors": "Chotikacharoensuk Thitinun, Arteca Richard N, Arteca Jeannette M", "reference": { "type": "PubMed", "id": "16533544", "url": "https://pubmed.ncbi.nlm.nih.gov/16533544" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8RXN8-1", "protein_name": "DCD domain-containing protein NRP", "gene_name": "NRP", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NLQ6-1", "protein_name": "Calcium-dependent protein kinase 32", "gene_name": "CPK32", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8RXN8", "url": "https://www.uniprot.org/uniprotkb/Q8RXN8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16533544", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Investigations on N-rich protein (NRP) of Arabidopsis thaliana under different stress conditions.", "journal": "Plant Physiol. 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[] } ] }, { "title": "The role for the exocyst complex subunits Exo70B2 and Exo70H1 in the plant-pathogen interaction.", "journal": "J. Exp. Bot.", "date": "2011", "authors": "Pecenkov\u00e1 Tamara, H\u00e1la Michal, Kulich Ivan, Kocourkov\u00e1 Daniela, Drdov\u00e1 Edita, Fendrych Maty\u00e1s, Toupalov\u00e1 Hana, Z\u00e1rsky Viktor", "reference": { "type": "PubMed", "id": "21199889", "url": "https://pubmed.ncbi.nlm.nih.gov/21199889" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8S3U9-1", "protein_name": "Exocyst complex component SEC5A", "gene_name": "SEC5A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VY27-1", "protein_name": "Exocyst complex component EXO70H1", "gene_name": "EXO70H1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LMJ4-1", "protein_name": "Exocyst complex component EXO70B2", "gene_name": "EXO70B2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7P9-1", "protein_name": "SNAP25 homologous protein SNAP33", "gene_name": "SNAP33", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JHH5-1", "protein_name": "Exocyst complex component SEC15B", "gene_name": "SEC15B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SX85-1", "protein_name": "Exocyst complex component SEC3A", "gene_name": "SEC3A", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8S3U9", "url": "https://www.uniprot.org/uniprotkb/Q8S3U9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.21199889", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", 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"count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Arabidopsis exocyst subunit SEC3A is essential for embryo development and accumulates in transient puncta at the plasma membrane.", "journal": "New Phytol.", "date": "2013", "authors": "Zhang Ying, Immink Richard, Liu Chun-Ming, Emons Anne Mie, Ketelaar Tijs", "reference": { "type": "PubMed", "id": "23495664", "url": "https://pubmed.ncbi.nlm.nih.gov/23495664" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8S3U9-1", "protein_name": "Exocyst complex component SEC5A", "gene_name": "SEC5A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZD3-1", "protein_name": "Exocyst complex component EXO70A1", "gene_name": 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"field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis exocyst subcomplex containing subunit EXO70B1 is involved in autophagy-related transport to the vacuole.", "journal": "Traffic (Copenhagen, Denmark)", "date": "2013-11", "authors": "Kulich Ivan, Pe\u010denkov\u00e1 Tamara, Sekere\u0161 Juraj, Smetana Ond\u0159ej, Fendrych Maty\u00e1\u0161, Foissner Ilse, H\u00f6ftberger Margit, Z\u00e1rsk\u00fd Viktor", "reference": { "type": "PubMed", "id": "23944713", "url": "https://pubmed.ncbi.nlm.nih.gov/23944713" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8S3U9-1", "protein_name": "Exocyst complex component SEC5A", "gene_name": "SEC5A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FGH9-1", "protein_name": "Exocyst 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"field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Over-expression of PHO1 in Arabidopsis leaves reveals its role in mediating phosphate efflux.", "journal": "The Plant journal : for cell and molecular biology", "date": "2011-05", "authors": "Stefanovic Aleksandra, Arpat A Bulak, Bligny Richard, Gout Elisabeth, Vidoudez Charles, Bensimon Micha\u00ebl, Poirier Yves", "reference": { "type": "PubMed", "id": "21309867", "url": "https://pubmed.ncbi.nlm.nih.gov/21309867" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8S403-1", "protein_name": "Phosphate transporter PHO1", "gene_name": "PHO1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8S403", "url": "https://www.uniprot.org/uniprotkb/Q8S403" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": 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[] } ] }, { "title": "A unique mechanism for protein processing and degradation in Arabidopsis thaliana.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "2003", "authors": "Rojo Enrique, Zouhar Jan, Carter Clay, Kovaleva Valentina, Raikhel Natasha V", "reference": { "type": "PubMed", "id": "12773619", "url": "https://pubmed.ncbi.nlm.nih.gov/12773619" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8VXZ7-1", "protein_name": "Alpha-galactosidase 3", "gene_name": "AGAL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39041-1", "protein_name": "Acid beta-fructofuranosidase 4, vacuolar", "gene_name": "BFRUCT4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8VXZ7", "url": "https://www.uniprot.org/uniprotkb/Q8VXZ7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12773619", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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Genet.", "date": "2007", "authors": "Franco-Zorrilla Jos\u00e9 Manuel, Valli Adri\u00e1n, Todesco Marco, Mateos Isabel, Puga Mar\u00eda Isabel, Rubio-Somoza Ignacio, Leyva Antonio, Weigel Detlef, Garc\u00eda Juan Antonio, Paz-Ares Javier", "reference": { "type": "PubMed", "id": "17643101", "url": "https://pubmed.ncbi.nlm.nih.gov/17643101" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8VY10-1", "protein_name": "Probable ubiquitin-conjugating enzyme E2 24", "gene_name": "UBC24", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94CL7-1", "protein_name": "Protein PHOSPHATE STARVATION RESPONSE 1", "gene_name": "PHR1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8VY10", "url": "https://www.uniprot.org/uniprotkb/Q8VY10" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], 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