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Immunol.", "date": "1999", "authors": "Ching K A, Kawakami Y, Kawakami T, Tsoukas C D", "reference": { "type": "PubMed", "id": "10570288", "url": "https://pubmed.ncbi.nlm.nih.gov/10570288" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q03526-1", "protein_name": "Tyrosine-protein kinase ITK/TSK", "gene_name": "Itk", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q03526", "url": "https://www.uniprot.org/uniprotkb/Q03526" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.10570288", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "itk, a T-cell-specific tyrosine kinase gene inducible by interleukin 2.", "journal": "Proc. 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U.S.A.", "date": "1992", "authors": "Siliciano J D, Morrow T A, Desiderio S V", "reference": { "type": "PubMed", "id": "1280821", "url": "https://pubmed.ncbi.nlm.nih.gov/1280821" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q03526-1", "protein_name": "Tyrosine-protein kinase ITK/TSK", "gene_name": "Itk", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q03526", "url": "https://www.uniprot.org/uniprotkb/Q03526" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.1280821", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "CD2 signaling in T cells involves tyrosine phosphorylation and activation of the Tec family kinase, EMT/ITK/TSK.", "journal": "Int. Immunol.", "date": "1996", "authors": "King P D, Sadra A, Han A, Liu X R, Sunder-Plassmann R, Reinherz E L, Dupont B", "reference": { "type": "PubMed", "id": "8943565", "url": "https://pubmed.ncbi.nlm.nih.gov/8943565" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q03526-1", "protein_name": "Tyrosine-protein kinase ITK/TSK", "gene_name": "Itk", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q03526", "url": "https://www.uniprot.org/uniprotkb/Q03526" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.8943565", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] 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cell morphology depends on its interaction with actin-capping protein.", "journal": "The Journal of biological chemistry", "date": "2006", "authors": "Canton DA, Olsten ME, Niederstrasser H, Cooper JA, Litchfield DW", "reference": { "type": "PubMed", "id": "16987810", "url": "https://pubmed.ncbi.nlm.nih.gov/16987810" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9JIY0-1", "protein_name": "Pleckstrin homology domain-containing family O member 1", "gene_name": "Plekho1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q53GL0-1", "protein_name": "Pleckstrin homology domain-containing family O member 1", "gene_name": "PLEKHO1", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9JIY0", "url": "https://www.uniprot.org/uniprotkb/Q9JIY0" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 155, "end_pos": 155, "sequence_org": "R", "sequence_mut": "A", "comment": "No change in cell morphology and actin cytoskeleton. Great loss of binding to capping proteins; when associated with A-157. Great loss of binding to capping proteins; when associated with A-157 and A-159.", "evidence": [ { "database": "UniProtKB", "id": "Q53GL0", "url": "https://www.uniprot.org/uniprotkb/Q53GL0" }, { "database": "PubMed", "id": "16987810", "url": "https://pubmed.ncbi.nlm.nih.gov/16987810" } ], "uniprot_canonical_ac": "Q53GL0-1" }, { "start_pos": 155, "end_pos": 155, "sequence_org": "R", "sequence_mut": "E", "comment": "No change in cell morphology and actin cytoskeleton. 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Casein kinase 2-interacting protein-1, a novel Akt pleckstrin homology domain-interacting protein, down-regulates PI3K/Akt signaling and suppresses tumor growth in vivo.", "journal": "Cancer research", "date": "2007-10-15", "authors": "Tokuda Emi, Fujita Naoya, Oh-hara Tomoko, Sato Shigeo, Kurata Atsuo, Katayama Ryohei, Itoh Toshiki, Takenawa Tadaomi, Miyazono Kohei, Tsuruo Takashi", "reference": { "type": "PubMed", "id": "17942896", "url": "https://pubmed.ncbi.nlm.nih.gov/17942896" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9JIY0-1", "protein_name": "Pleckstrin homology domain-containing family O member 1", "gene_name": "Plekho1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q53GL0-1", "protein_name": "Pleckstrin homology domain-containing family O member 1", "gene_name": "PLEKHO1", "tax_name": 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aggravates diabetic renal fibrosis (original article).", "journal": "Biochemical pharmacology", "date": "2022-12", "authors": "Yang Yan, Xiao Haiming, Lin Zeyuan, Chen Rui, Li Shanshan, Li Chuting, Sun Xiaohong, Hei Ziqing, Gong Wenyan, Huang Heqing", "reference": { "type": "PubMed", "id": "36347273", "url": "https://pubmed.ncbi.nlm.nih.gov/36347273" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9JIY0-1", "protein_name": "Pleckstrin homology domain-containing family O member 1", "gene_name": "Plekho1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9JIY0", "url": "https://www.uniprot.org/uniprotkb/Q9JIY0" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.36347273", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { 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"authors": "Hiepen C, Benn A, Denkis A, Lukonin I, Weise C, Boergermann JH, Knaus P", "reference": { "type": "PubMed", "id": "24885555", "url": "https://pubmed.ncbi.nlm.nih.gov/24885555" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8K1N2-1", "protein_name": "Pleckstrin homology-like domain family B member 2", "gene_name": "Phldb2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8K1N2", "url": "https://www.uniprot.org/uniprotkb/Q8K1N2" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.24885555", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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[] } ] }, { "title": "Identification and functional analysis of the pre-piRNA 3' trimmer in silkworms.", "journal": "Cell", "date": "2016", "authors": "Izumi Natsuko, Shoji Keisuke, Sakaguchi Yuriko, Honda Shozo, Kirino Yohei, Suzuki Tsutomu, Katsuma Susumu, Tomari Yukihide", "reference": { "type": "PubMed", "id": "26919431", "url": "https://pubmed.ncbi.nlm.nih.gov/26919431" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "B2RXZ1-1", "protein_name": "Poly(A)-specific ribonuclease PNLDC1", "gene_name": "Pnldc1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "B2RXZ1", "url": "https://www.uniprot.org/uniprotkb/B2RXZ1" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.26919431", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { 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"field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mammalian PNLDC1 is a novel poly(A) specific exonuclease with discrete expression during early development.", "journal": "Nucleic acids research", "date": "2016", "authors": "Anastasakis D, Skeparnias I, Shaukat AN, Grafanaki K, Kanellou A, Taraviras S, Papachristou DJ, Papakyriakou A, Stathopoulos C", "reference": { "type": "PubMed", "id": "27515512", "url": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "PNLDC1 is essential for piRNA 3' end trimming and transposon silencing during spermatogenesis in mice.", "journal": "Nature communications", "date": "2017", "authors": "Ding D, Liu J, Dong K, Midic U, Hess RA, Xie H, Demireva EY, Chen C", "reference": { "type": "PubMed", "id": "29018194", "url": "https://pubmed.ncbi.nlm.nih.gov/29018194" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "B2RXZ1-1", "protein_name": "Poly(A)-specific ribonuclease PNLDC1", "gene_name": "Pnldc1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "B2RXZ1", "url": "https://www.uniprot.org/uniprotkb/B2RXZ1" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.29018194", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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3.", "journal": "Nucleic Acids Res.", "date": "1989", "authors": "Hurt MM, Chodchoy N, Marzluff WF", "reference": { "type": "PubMed", "id": "2587235", "url": "https://pubmed.ncbi.nlm.nih.gov/2587235" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P84228-1", "protein_name": "Histone H3.2", "gene_name": "H3c13; H3c14; H3c15; H3c2; H3c3; H3c4; H3c6; H3c7", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6GSS7-1", "protein_name": "Histone H2A type 2-A", "gene_name": "Hist2h2aa1; Hist2h2aa2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P84228", "url": "https://www.uniprot.org/uniprotkb/P84228" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.2587235", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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Mol. Evol.", "date": "1986", "authors": "Taylor J D, Wellman S E, Marzluff W F", "reference": { "type": "PubMed", "id": "3027355", "url": "https://pubmed.ncbi.nlm.nih.gov/3027355" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P84228-1", "protein_name": "Histone H3.2", "gene_name": "H3c13; H3c14; H3c15; H3c2; H3c3; H3c4; H3c6; H3c7", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P68433-1", "protein_name": "Histone H3.1", "gene_name": "H3c10; H3c11; H3c1; H3c8", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P84228", "url": "https://www.uniprot.org/uniprotkb/P84228" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.3027355", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { 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"Histone H3.2", "gene_name": "H3c13; H3c14; H3c15; H3c2; H3c3; H3c4; H3c6; H3c7", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P84228", "url": "https://www.uniprot.org/uniprotkb/P84228" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.34168076", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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Saccharomyces cerevisiae HBS1 gene is phylogenetically related to eukaryotic release factor 3 (eRF3) but does not carry eRF3-like activity.", "journal": "FEBS Lett.", "date": "1998", "authors": "Wallrapp C, Verrier S B, Zhouravleva G, Philippe H, Philippe M, Gress T M, Jean-Jean O", "reference": { "type": "PubMed", "id": "9872408", "url": "https://pubmed.ncbi.nlm.nih.gov/9872408" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q69ZS7-1", "protein_name": "HBS1-like protein", "gene_name": "Hbs1l", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9Y450-1", "protein_name": "HBS1-like protein", "gene_name": "HBS1L", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q69ZS7", "url": "https://www.uniprot.org/uniprotkb/Q69ZS7" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.9872408", "abstract": "", 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"n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "PUMA-G, an IFN-gamma-inducible gene in macrophages is a novel member of the seven transmembrane spanning receptor superfamily.", "journal": "Eur. J. Immunol.", "date": "2001", "authors": "Schaub A, F\u00fctterer A, Pfeffer K", "reference": { "type": "PubMed", "id": "11745392", "url": "https://pubmed.ncbi.nlm.nih.gov/11745392" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9EP66-1", "protein_name": "Hydroxycarboxylic acid receptor 2", "gene_name": "Hcar2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9EP66", "url": "https://www.uniprot.org/uniprotkb/Q9EP66" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.11745392", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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Lin, Liu Jiaxin, Yan Qingqing", "reference": { "type": "PubMed", "id": "38761195", "url": "https://pubmed.ncbi.nlm.nih.gov/38761195" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9EP66-1", "protein_name": "Hydroxycarboxylic acid receptor 2", "gene_name": "Hcar2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9EP66", "url": "https://www.uniprot.org/uniprotkb/Q9EP66" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.38761195", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", 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