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Biol. Chem.", "date": "1998", "authors": "Schrader M, Reuber B E, Morrell J C, Jimenez-Sanchez G, Obie C, Stroh T A, Valle D, Schroer T A, Gould S J", "reference": { "type": "PubMed", "id": "9792670", "url": "https://pubmed.ncbi.nlm.nih.gov/9792670" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Z210-1", "protein_name": "Peroxisomal membrane protein 11B", "gene_name": "Pex11b", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O96011-1", "protein_name": "Peroxisomal membrane protein 11B", "gene_name": "PEX11B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Z211-1", "protein_name": "Peroxisomal membrane protein 11A", "gene_name": "Pex11a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O70597-1", "protein_name": "Peroxisomal membrane protein 11A", "gene_name": "Pex11a", "tax_name": "Rat" }, { "uniprot_canonical_ac": "O75192-1", "protein_name": "Peroxisomal membrane protein 11A", "gene_name": "PEX11A", "tax_name": "Human" } ], "species": [ { "name": 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Chromosomal mapping of HCaRG, a novel hypertension-related, calcium-regulated gene.", "journal": "Folia biologica", "date": "2002", "authors": "Solban N, Dumas P, Gossard F, Sun Y, Pravenec M, Kren V, Lewanczuk R, Hamet P, Tremblay J", "reference": { "type": "PubMed", "id": "11871861", "url": "https://pubmed.ncbi.nlm.nih.gov/11871861" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8R395-1", "protein_name": "COMM domain-containing protein 5", "gene_name": "Commd5", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9ERR2-1", "protein_name": "COMM domain-containing protein 5", "gene_name": "Commd5", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q9GZQ3-1", "protein_name": "COMM domain-containing protein 5", "gene_name": "COMMD5", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8R395", "url": 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human carnosinase and a closely related non-specific dipeptidase.", "journal": "J. Biol. Chem.", "date": "2003", "authors": "Teufel M, Saudek V, Ledig JP, Bernhardt A, Boularand S, Carreau A, Cairns NJ, Carter C, Cowley DJ, Duverger D, Ganzhorn AJ, Guenet C, Heintzelmann B, Laucher V, Sauvage C, Smirnova T", "reference": { "type": "PubMed", "id": "12473676", "url": "https://pubmed.ncbi.nlm.nih.gov/12473676" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BUG2-1", "protein_name": "Beta-Ala-His dipeptidase", "gene_name": "Cndp1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P09211-1", "protein_name": "Glutathione S-transferase P", "gene_name": "GSTP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q03154-1", "protein_name": "Aminoacylase-1", "gene_name": "ACY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11245-1", "protein_name": "Arylamine N-acetyltransferase 2", "gene_name": "NAT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18440-1", "protein_name": "Arylamine N-acetyltransferase 1", "gene_name": "NAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14841-1", "protein_name": "5-oxoprolinase", "gene_name": "OPLAH", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48637-1", "protein_name": "Glutathione synthetase", "gene_name": "GSS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48507-1", "protein_name": "Glutamate--cysteine ligase regulatory subunit", "gene_name": "GCLM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KP4-1", "protein_name": "Cytosolic non-specific dipeptidase", "gene_name": "CNDP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05181-1", "protein_name": "Cytochrome P450 2E1", "gene_name": "CYP2E1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KN2-1", "protein_name": "Beta-Ala-His dipeptidase", "gene_name": "CNDP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WUX2-1", "protein_name": "Glutathione-specific gamma-glutamylcyclotransferase 2", "gene_name": "CHAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75223-1", 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"gene_name": "SULT1A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P531-1", "protein_name": "Glutathione hydrolase 6", "gene_name": "GGT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49888-1", "protein_name": "Sulfotransferase 1E1", "gene_name": "SULT1E1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q66HG3-1", "protein_name": "Beta-Ala-His dipeptidase", "gene_name": "Cndp1", "tax_name": "Rat" }, { "uniprot_canonical_ac": "P30711-1", "protein_name": "Glutathione S-transferase theta-1", "gene_name": "GSTT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DMM9-1", "protein_name": "Sulfotransferase 1A3", "gene_name": "SULT1A3; SULT1A4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19440-1", "protein_name": "Glutathione hydrolase 1 proenzyme", "gene_name": "GGT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NGU5-1", "protein_name": "Putative glutathione hydrolase 3 proenzyme", "gene_name": "GGT3P", "tax_name": "Human" }, { "uniprot_canonical_ac": 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ligase catalytic subunit", "gene_name": "GCLC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJ14-1", "protein_name": "Glutathione hydrolase 7", "gene_name": "GGT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92887-1", "protein_name": "ATP-binding cassette sub-family C member 2", "gene_name": "ABCC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15439-1", "protein_name": "ATP-binding cassette sub-family C member 4", "gene_name": "ABCC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15438-1", "protein_name": "ATP-binding cassette sub-family C member 3", "gene_name": "ABCC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNQ0-1", "protein_name": "Broad substrate specificity ATP-binding cassette transporter ABCG2", "gene_name": "ABCG2", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BUG2", "url": "https://www.uniprot.org/uniprotkb/Q8BUG2" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 132, "end_pos": 132, "sequence_org": "H", "sequence_mut": "A", "comment": "Loss of metallodipeptidase activity.", "evidence": [ { "database": "UniProtKB", "id": "Q96KN2", "url": "https://www.uniprot.org/uniprotkb/Q96KN2" }, { "database": "PubMed", "id": "12473676", "url": "https://pubmed.ncbi.nlm.nih.gov/12473676" } ], "uniprot_canonical_ac": "Q96KN2-1" }, { "start_pos": 165, "end_pos": 165, "sequence_org": "D", "sequence_mut": "A", "comment": "Loss of metallodipeptidase activity.", "evidence": [ { "database": "UniProtKB", "id": "Q96KN2", "url": "https://www.uniprot.org/uniprotkb/Q96KN2" }, { "database": "PubMed", "id": "12473676", "url": "https://pubmed.ncbi.nlm.nih.gov/12473676" } ], "uniprot_canonical_ac": "Q96KN2-1" }, { "start_pos": 200, "end_pos": 200, "sequence_org": "E", "sequence_mut": "A", "comment": "Loss of metallodipeptidase activity.", "evidence": [ { "database": "UniProtKB", "id": "Q96KN2", "url": "https://www.uniprot.org/uniprotkb/Q96KN2" }, { "database": "PubMed", "id": "12473676", "url": "https://pubmed.ncbi.nlm.nih.gov/12473676" } ], "uniprot_canonical_ac": "Q96KN2-1" } ], "record_id": "pubmed.12473676", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 40 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { 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"n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Metabolite proofreading in carnosine and homocarnosine synthesis: molecular identification of PM20D2 as beta-alanyl-lysine dipeptidase.", "journal": "The Journal of biological chemistry", "date": "2014", "authors": "Veiga-da-Cunha M, Chevalier N, Stroobant V, Vertommen D, Van Schaftingen E", "reference": { "type": "PubMed", "id": "24891507", "url": "https://pubmed.ncbi.nlm.nih.gov/24891507" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BUG2-1", "protein_name": "Beta-Ala-His dipeptidase", "gene_name": "Cndp1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "A3KG59-1", "protein_name": "Xaa-Arg dipeptidase", "gene_name": "Pm20d2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8IYS1-1", "protein_name": "Xaa-Arg dipeptidase", "gene_name": "PM20D2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KN2-1", "protein_name": "Beta-Ala-His dipeptidase", "gene_name": "CNDP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "D4AAB5-1", "protein_name": "Xaa-Arg dipeptidase", "gene_name": "Pm20d2", "tax_name": "Rat" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BUG2", "url": "https://www.uniprot.org/uniprotkb/Q8BUG2" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.24891507", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Family-wide Annotation of Enzymatic Pathways by Parallel In Vivo Metabolomics.", "journal": "Cell chemical biology", "date": "2019", "authors": "Kim JT, Li VL, Terrell SM, Fischer CR, Long JZ", "reference": { "type": "PubMed", "id": "31587987", "url": "https://pubmed.ncbi.nlm.nih.gov/31587987" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BUG2-1", "protein_name": "Beta-Ala-His dipeptidase", "gene_name": "Cndp1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D1A2-1", "protein_name": "Cytosolic non-specific dipeptidase", "gene_name": "Cndp2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q99JW2-1", "protein_name": "Aminoacylase-1", "gene_name": "Acy1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BUG2", "url": "https://www.uniprot.org/uniprotkb/Q8BUG2" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 166, "end_pos": 166, "sequence_org": "E", "sequence_mut": "A", "comment": "Loss of threonyl dipeptidase activity.", "evidence": [ { "database": "UniProtKB", "id": "Q9D1A2", "url": "https://www.uniprot.org/uniprotkb/Q9D1A2" }, { "database": "PubMed", "id": "31587987", "url": "https://pubmed.ncbi.nlm.nih.gov/31587987" } ], "uniprot_canonical_ac": "Q9D1A2-1" } ], "record_id": "pubmed.31587987", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structures of sperm flagellar doublet microtubules expand the genetic spectrum of male infertility.", "journal": "Cell", "date": "2023-06-22", "authors": "Zhou Lunni, Liu Haobin, Liu Siyu, Yang Xiaoyu, Dong Yue, Pan Yun, Xiao Zhuang, Zheng Beihong, Sun Yan, Huang Pengyu, Zhang Xixi, Hu Jin, Sun Rui, Feng Shan, Zhu Yi, Liu Mingxi, Gui Miao, Wu Jianping", "reference": { "type": "PubMed", "id": "37295417", "url": "https://pubmed.ncbi.nlm.nih.gov/37295417" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A6H6Q4-1", "protein_name": "Tektin bundle-interacting protein 1", "gene_name": "Tektip1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9CQT6-1", "protein_name": "Sperm-associated microtubule inner protein 5", "gene_name": "Spmip5", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q148A4-1", "protein_name": "Stabilizer of axonemal microtubules 4", "gene_name": "Saxo4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9QXL8-1", "protein_name": "Nucleoside diphosphate kinase 7", "gene_name": "Nme7", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D4K5-1", "protein_name": "Ciliary microtubule inner protein 2A", "gene_name": "Cimip2a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9DAG4-1", "protein_name": "Protein SPMIP9", "gene_name": "Spmip9", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6P8X9-1", "protein_name": "Protein Flattop", "gene_name": "Cfap126", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q61884-1", "protein_name": "Meiosis-specific nuclear structural protein 1", "gene_name": "Mns1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q5BN45-1", "protein_name": "Piercer of microtubule wall 1 protein", "gene_name": "Pierce1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BTU1-1", "protein_name": "Cilia- and flagella-associated protein 20", "gene_name": "Cfap20", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9CQC3-1", "protein_name": "Cilia- and flagella-associated protein 95", "gene_name": "Cfap95", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9DAR0-1", "protein_name": "Cilia- and flagella-associated protein 90", "gene_name": "Cfap90", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q5NC57-1", "protein_name": "Cilia- and flagella-associated protein 144", "gene_name": "Cfap144", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6SP97-1", "protein_name": "Enkurin", "gene_name": "Enkur", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D4Q1-1", "protein_name": "RIB43A-like with coiled-coils protein 2", "gene_name": "Ribc2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D0B8-1", "protein_name": "RIB43A-like with coiled-coils protein 1", "gene_name": "Ribc1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q2MH31-1", "protein_name": "Sperm microtubule inner protein 6", "gene_name": "Spmip6", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q149S1-1", "protein_name": "Tektin-4", "gene_name": "Tekt4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9DAJ2-1", "protein_name": "Tektin-1", "gene_name": "Tekt1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q4KKZ1-1", "protein_name": "Cilia- and flagella-associated protein 107", "gene_name": "Cfap107", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D9D9-1", "protein_name": "Cilia- and flagella-associated protein 141", "gene_name": "Cfap141", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9DAD0-1", "protein_name": "Cilia- and flagella-associated protein 276", "gene_name": "Cfap276", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q920N1-1", "protein_name": "Ciliary microtubule associated protein 1A", "gene_name": "Cimap1a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CDT5-1", "protein_name": "Sperm microtubule inner protein 11", "gene_name": "Spmip11", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6P1E8-1", "protein_name": "EF-hand calcium-binding domain-containing protein 6", "gene_name": "Efcab6", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "V9GXK1-1", "protein_name": "Piercer of microtubule wall 2 protein", "gene_name": "Pierce2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D9U9-1", "protein_name": "Cilia- and flagella-associated protein 45", "gene_name": "Cfap45", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q3V0Q6-1", "protein_name": "Sperm-associated antigen 8", "gene_name": "Spag8", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P05214-1", "protein_name": "Tubulin alpha-3 chain", "gene_name": "Tuba3a; Tuba3b", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D485-1", "protein_name": "EF-hand domain-containing family member C2", "gene_name": "Efhc2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D9T8-1", "protein_name": "EF-hand domain-containing protein 1", "gene_name": "Efhc1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D439-1", "protein_name": "Cilia- and flagella-associated protein 53", "gene_name": "Cfap53", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "A0JLY1-1", "protein_name": "Cilia- and flagella- associated protein 210", "gene_name": "Cfap210", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9DAS2-1", "protein_name": "Ciliary microtubule inner protein 2C", "gene_name": "Cimip2c", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q5F201-1", "protein_name": "Cilia- and flagella-associated protein 52", "gene_name": "Cfap52", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D131-1", "protein_name": "Cilia- and flagella-associated protein 68", "gene_name": "Cfap68", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6P8Y0-1", "protein_name": "Cilia- and flagella-associated protein 161", "gene_name": "Cfap161", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CDU5-1", "protein_name": "EF-hand domain-containing family member B", "gene_name": "Efhb", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D9D8-1", "protein_name": "Dual specificity phosphatase 21", "gene_name": "Dusp21", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9DAK2-1", "protein_name": "Parkin coregulated gene protein homolog", "gene_name": "Pacrg", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q922G7-1", "protein_name": "Tektin-2", "gene_name": "Tekt2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "G5E8A8-1", "protein_name": "Tektin-5", "gene_name": "Tekt5", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6X6Z7-1", "protein_name": "Tektin-3", "gene_name": "Tekt3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WRI3-1", "protein_name": "Cilia- and flagella-associated protein 77", "gene_name": "Cfap77", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D4K7-1", "protein_name": "Tektin-like protein 1", "gene_name": "Tektl1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D9I1-1", "protein_name": "Sperm-associated microtubule inner protein 10", "gene_name": "Spmip10", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6IMH0-1", "protein_name": "Sperm microtubule inner protein 8", "gene_name": "Spmip8", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P68372-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "Tubb4b", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q925K9-1", "protein_name": "Testis-specific serine/threonine-protein kinase 6", "gene_name": "Tssk6", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "A6H6Q4", "url": "https://www.uniprot.org/uniprotkb/A6H6Q4" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 105, "end_pos": 105, "sequence_org": "C", "sequence_mut": "A", "comment": "Abolished protein phosphatase activity.", "evidence": [ { "database": "UniProtKB", "id": "Q9D9D8", "url": "https://www.uniprot.org/uniprotkb/Q9D9D8" }, { "database": "PubMed", "id": "37295417", "url": "https://pubmed.ncbi.nlm.nih.gov/37295417" } ], "uniprot_canonical_ac": "Q9D9D8-1" } ], "record_id": "pubmed.37295417", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 49 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "De novo protein identification in mammalian sperm using in situ cryoelectron tomography and AlphaFold2 docking.", "journal": "Cell", "date": "2023-11-09", "authors": "Chen Zhen, Shiozaki Momoko, Haas Kelsey M, Skinner Will M, Zhao Shumei, Guo Caiying, Polacco Benjamin J, Yu Zhiheng, Krogan Nevan J, Lishko Polina V, Kaake Robyn M, Vale Ronald D, Agard David A", "reference": { "type": "PubMed", "id": "37865089", "url": "https://pubmed.ncbi.nlm.nih.gov/37865089" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A6H6Q4-1", "protein_name": "Tektin bundle-interacting protein 1", "gene_name": "Tektip1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9QXL8-1", "protein_name": "Nucleoside diphosphate kinase 7", "gene_name": "Nme7", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6P8X9-1", "protein_name": "Protein Flattop", "gene_name": "Cfap126", "tax_name": "Mouse" }, { "uniprot_canonical_ac": 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"Tektin-4", "gene_name": "Tekt4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9DAJ2-1", "protein_name": "Tektin-1", "gene_name": "Tekt1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q4KKZ1-1", "protein_name": "Cilia- and flagella-associated protein 107", "gene_name": "Cfap107", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D9D9-1", "protein_name": "Cilia- and flagella-associated protein 141", "gene_name": "Cfap141", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9DAD0-1", "protein_name": "Cilia- and flagella-associated protein 276", "gene_name": "Cfap276", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6P1E8-1", "protein_name": "EF-hand calcium-binding domain-containing protein 6", "gene_name": "Efcab6", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "V9GXK1-1", "protein_name": "Piercer of microtubule wall 2 protein", "gene_name": "Pierce2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D9U9-1", "protein_name": "Cilia- and flagella-associated protein 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"Cfap52", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6P8Y0-1", "protein_name": "Cilia- and flagella-associated protein 161", "gene_name": "Cfap161", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CDU5-1", "protein_name": "EF-hand domain-containing family member B", "gene_name": "Efhb", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D7X3-1", "protein_name": "Dual specificity protein phosphatase 3", "gene_name": "Dusp3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9DAK2-1", "protein_name": "Parkin coregulated gene protein homolog", "gene_name": "Pacrg", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q922G7-1", "protein_name": "Tektin-2", "gene_name": "Tekt2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "G5E8A8-1", "protein_name": "Tektin-5", "gene_name": "Tekt5", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6X6Z7-1", "protein_name": "Tektin-3", "gene_name": "Tekt3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D4K7-1", "protein_name": 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "In-cell structural insight into the stability of sperm microtubule doublet.", "journal": "Cell discovery", "date": "2023-11-21", "authors": "Tai Linhua, Yin Guoliang, Huang Xiaojun, Sun Fei, Zhu Yun", "reference": { "type": "PubMed", "id": "37989994", "url": "https://pubmed.ncbi.nlm.nih.gov/37989994" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A6H6Q4-1", "protein_name": "Tektin bundle-interacting protein 1", "gene_name": "Tektip1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9QXL8-1", "protein_name": "Nucleoside diphosphate kinase 7", 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"protein_name": "Piercer of microtubule wall 2 protein", "gene_name": "Pierce2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D9U9-1", "protein_name": "Cilia- and flagella-associated protein 45", "gene_name": "Cfap45", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q3V0Q6-1", "protein_name": "Sperm-associated antigen 8", "gene_name": "Spag8", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P05214-1", "protein_name": "Tubulin alpha-3 chain", "gene_name": "Tuba3a; Tuba3b", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D485-1", "protein_name": "EF-hand domain-containing family member C2", "gene_name": "Efhc2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D9T8-1", "protein_name": "EF-hand domain-containing protein 1", "gene_name": "Efhc1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D439-1", "protein_name": "Cilia- and flagella-associated protein 53", "gene_name": "Cfap53", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "A0JLY1-1", "protein_name": "Cilia- and flagella- associated protein 210", "gene_name": "Cfap210", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9DAS2-1", "protein_name": "Ciliary microtubule inner protein 2C", "gene_name": "Cimip2c", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q5F201-1", "protein_name": "Cilia- and flagella-associated protein 52", "gene_name": "Cfap52", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6P8Y0-1", "protein_name": "Cilia- and flagella-associated protein 161", "gene_name": "Cfap161", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CDU5-1", "protein_name": "EF-hand domain-containing family member B", "gene_name": "Efhb", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D9D8-1", "protein_name": "Dual specificity phosphatase 21", "gene_name": "Dusp21", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9DAK2-1", "protein_name": "Parkin coregulated gene protein homolog", "gene_name": "Pacrg", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q922G7-1", "protein_name": 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[] } ] }, { "title": "De-orphanization of cytochrome P450 2R1: a microsomal vitamin D 25-hydroxilase.", "journal": "The Journal of biological chemistry", "date": "2003", "authors": "Cheng JB, Motola DL, Mangelsdorf DJ, Russell DW", "reference": { "type": "PubMed", "id": "12867411", "url": "https://pubmed.ncbi.nlm.nih.gov/12867411" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6VVW9-1", "protein_name": "Vitamin D 25-hydroxylase", "gene_name": "Cyp2r1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q07973-1", "protein_name": "1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial", "gene_name": "CYP24A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6VVX0-1", "protein_name": "Vitamin D 25-hydroxylase", "gene_name": "CYP2R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15528-1", "protein_name": "25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial", "gene_name": "CYP27B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99538-1", 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States of America", "date": "2013", "authors": "Zhu JG, Ochalek JT, Kaufmann M, Jones G, Deluca HF", "reference": { "type": "PubMed", "id": "24019477", "url": "https://pubmed.ncbi.nlm.nih.gov/24019477" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6VVW9-1", "protein_name": "Vitamin D 25-hydroxylase", "gene_name": "Cyp2r1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q6VVW9", "url": "https://www.uniprot.org/uniprotkb/Q6VVW9" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.24019477", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "25-hydroxyvitamin D3 1alpha-hydroxylase and vitamin D synthesis.", "journal": "Science", "date": "1997", "authors": "Takeyama K, Kitanaka S, Sato T, Kobori M, Yanagisawa J, Kato S", "reference": { "type": "PubMed", "id": "9295274", "url": "https://pubmed.ncbi.nlm.nih.gov/9295274" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O35084-1", "protein_name": "25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial", "gene_name": "Cyp27b1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O35084", "url": "https://www.uniprot.org/uniprotkb/O35084" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.9295274", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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"uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75177-1", "protein_name": "Calcium-responsive transactivator", "gene_name": "SS18L1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92785-1", "protein_name": "Zinc finger protein ubi-d4", "gene_name": "DPF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96GM5-1", "protein_name": "SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1", "gene_name": "SMARCD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09028-1", "protein_name": "Histone-binding protein RBBP4", "gene_name": "RBBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92782-2", "protein_name": "Zinc finger protein neuro-d4", "gene_name": "DPF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q969G3-1", "protein_name": "SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1", "gene_name": "SMARCE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8CGT6-1", "protein_name": "Piwi-like protein 4", "gene_name": "Piwil4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P0DOY1-1", "protein_name": "DNA (cytosine-5)-methyltransferase 3C", "gene_name": "Dnmt3c", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q12873-1", "protein_name": "ATP-dependent chromatin remodeler CHD3", "gene_name": "CHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE9-1", "protein_name": "B-cell CLL/lymphoma 7 protein family member B", "gene_name": "BCL7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92922-1", "protein_name": "SWI/SNF complex subunit SMARCC1", "gene_name": "SMARCC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92769-1", "protein_name": "Histone deacetylase 2", "gene_name": "HDAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4VC05-1", "protein_name": "B-cell CLL/lymphoma 7 protein family member A", "gene_name": "BCL7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94776-1", "protein_name": "Metastasis-associated protein MTA2", "gene_name": "MTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTC8-1", "protein_name": "Metastasis-associated protein MTA3", "gene_name": "MTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z3Z4-1", "protein_name": "Piwi-like protein 4", "gene_name": "PIWIL4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTM1-1", "protein_name": "Histone H2A.J", "gene_name": "H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZMY3-1", "protein_name": "SPOC domain-containing protein 1", "gene_name": "SPOCD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "B1ASB6-1", "protein_name": "SPOC domain-containing protein 1", "gene_name": "Spocd1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8TAQ2-1", "protein_name": "SWI/SNF complex subunit SMARCC2", "gene_name": "SMARCC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96019-1", "protein_name": "Actin-like protein 6A", "gene_name": "ACTL6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI9-1", "protein_name": "Transcriptional repressor p66-beta", "gene_name": "GATAD2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "H3BKT1", "url": "https://www.uniprot.org/uniprotkb/H3BKT1" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.38359823", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 70 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Insertional mutation of the collagen genes Col4a3 and Col4a4 in a mouse model of Alport syndrome.", "journal": "Genomics", "date": "1999", "authors": "Lu W, Phillips C L, Killen P D, Hlaing T, Harrison W R, Elder F F, Miner J H, Overbeek P A, Meisler M H", "reference": { "type": "PubMed", "id": "10534397", "url": "https://pubmed.ncbi.nlm.nih.gov/10534397" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9QZS0-1", "protein_name": "Collagen alpha-3(IV) chain", "gene_name": "Col4a3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9QZR9-1", "protein_name": "Collagen alpha-4(IV) chain", "gene_name": "Col4a4", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9QZS0", "url": "https://www.uniprot.org/uniprotkb/Q9QZS0" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.10534397", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", 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"https://pubmed.ncbi.nlm.nih.gov/12842087" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9QZS0-1", "protein_name": "Collagen alpha-3(IV) chain", "gene_name": "Col4a3", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9QZS0", "url": "https://www.uniprot.org/uniprotkb/Q9QZS0" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.12842087", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", 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Pharmacol.", "date": "1986", "authors": "Peterson T C, Gonzalez F J, Nebert D W", "reference": { "type": "PubMed", "id": "2425809", "url": "https://pubmed.ncbi.nlm.nih.gov/2425809" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P00186-1", "protein_name": "Cytochrome P450 1A2", "gene_name": "Cyp1a2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P00184-1", "protein_name": "Cytochrome P450 1A1", "gene_name": "Cyp1a1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P00186", "url": "https://www.uniprot.org/uniprotkb/P00186" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.2425809", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], 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Biol. Chem.", "date": "1985", "authors": "Gonzalez F J, Kimura S, Nebert D W", "reference": { "type": "PubMed", "id": "3988744", "url": "https://pubmed.ncbi.nlm.nih.gov/3988744" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P00186-1", "protein_name": "Cytochrome P450 1A2", "gene_name": "Cyp1a2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P00184-1", "protein_name": "Cytochrome P450 1A1", "gene_name": "Cyp1a1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P00186", "url": "https://www.uniprot.org/uniprotkb/P00186" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.3988744", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "The murine Ah locus. Comparison of the complete cytochrome P1-450 and P3-450 cDNA nucleotide and amino acid sequences.", "journal": "J. Biol. Chem.", "date": "1984", "authors": "Kimura S, Gonzalez F J, Nebert D W", "reference": { "type": "PubMed", "id": "6547952", "url": "https://pubmed.ncbi.nlm.nih.gov/6547952" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P00186-1", "protein_name": "Cytochrome P450 1A2", "gene_name": "Cyp1a2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P00184-1", "protein_name": "Cytochrome P450 1A1", "gene_name": "Cyp1a1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P00186", "url": "https://www.uniprot.org/uniprotkb/P00186" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.6547952", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": 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Sin.", "date": "2004", "authors": "Hou Wei-Hong, Wang Tian-Yun, Yuan Bao-Mei, Chai Yu-Rong, Jia Yan-Long, Tian Fang, Wang Jian-Min, Xue Le-Xun", "reference": { "type": "PubMed", "id": "15592653", "url": "https://pubmed.ncbi.nlm.nih.gov/15592653" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P08122-1", "protein_name": "Collagen alpha-2(IV) chain", "gene_name": "Col4a2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P08122", "url": "https://www.uniprot.org/uniprotkb/P08122" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.15592653", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The complete primary structure of mouse alpha 2(IV) collagen. Alignment with mouse alpha 1(IV) collagen.", "journal": "J. Biol. 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Biochem.", "date": "1986", "authors": "Schwarz U, Schuppan D, Oberb\u00e4umer I, Glanville R W, Deutzmann R, Timpl R, K\u00fchn K", "reference": { "type": "PubMed", "id": "3011432", "url": "https://pubmed.ncbi.nlm.nih.gov/3011432" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P08122-1", "protein_name": "Collagen alpha-2(IV) chain", "gene_name": "Col4a2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P08122", "url": "https://www.uniprot.org/uniprotkb/P08122" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.3011432", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Head-to-head arrangement of murine type IV collagen genes.", "journal": "J. 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Natl. Acad. Sci. U.S.A.", "date": "1988", "authors": "Burbelo P D, Martin G R, Yamada Y", "reference": { "type": "PubMed", "id": "3200851", "url": "https://pubmed.ncbi.nlm.nih.gov/3200851" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P08122-1", "protein_name": "Collagen alpha-2(IV) chain", "gene_name": "Col4a2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P02463-1", "protein_name": "Collagen alpha-1(IV) chain", "gene_name": "Col4a1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P08122", "url": "https://www.uniprot.org/uniprotkb/P08122" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.3200851", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], 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Biol.", "date": "1999", "authors": "Lavery D J, Lopez-Molina L, Margueron R, Fleury-Olela F, Conquet F, Schibler U, Bonfils C", "reference": { "type": "PubMed", "id": "10490589", "url": "https://pubmed.ncbi.nlm.nih.gov/10490589" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P15392-1", "protein_name": "Cytochrome P450 2A4", "gene_name": "Cyp2a4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P20852-1", "protein_name": "Cytochrome P450 2A5", "gene_name": "Cyp2a5", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P15392", "url": "https://www.uniprot.org/uniprotkb/P15392" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.10490589", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The structure and characterization of type I P-450(15) alpha gene as major steroid 15 alpha-hydroxylase and its comparison with type II P-450(15) alpha gene.", "journal": "J. 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Human calmodulin methyltransferase: expression, activity on calmodulin, and Hsp90 dependence.", "journal": "PLoS ONE", "date": "2012", "authors": "Magen S, Magnani R, Haziza S, Hershkovitz E, Houtz R, Cambi F, Parvari R", "reference": { "type": "PubMed", "id": "23285036", "url": "https://pubmed.ncbi.nlm.nih.gov/23285036" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q3U2J5-1", "protein_name": "Calmodulin-lysine N-methyltransferase", "gene_name": "Camkmt", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q7Z624-1", "protein_name": "Calmodulin-lysine N-methyltransferase", "gene_name": "CAMKMT", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q3U2J5", "url": "https://www.uniprot.org/uniprotkb/Q3U2J5" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus 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Lan D, Keinan O, Saada A, Hershkovitz E, Yanay N, Cohen Y, Nevo Y, Houtz RL, Sheffield VC, Golan H, Parvari R", "reference": { "type": "PubMed", "id": "26247364", "url": "https://pubmed.ncbi.nlm.nih.gov/26247364" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q3U2J5-1", "protein_name": "Calmodulin-lysine N-methyltransferase", "gene_name": "Camkmt", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q3U2J5", "url": "https://www.uniprot.org/uniprotkb/Q3U2J5" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.26247364", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Nomenclature for ion channel subunits.", "journal": "Science", "date": "2001", "authors": "Bradley J, Frings S, Yau KW, Reed R", "reference": { "type": "PubMed", "id": "11764791", "url": "https://pubmed.ncbi.nlm.nih.gov/11764791" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q3UW12-1", "protein_name": "Cyclic nucleotide-gated channel alpha-4", "gene_name": "Cnga4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JJZ9-1", "protein_name": "Cyclic nucleotide-gated channel beta-3", "gene_name": "Cngb3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "E1AZ71-1", "protein_name": "Cyclic nucleotide-gated channel beta-1", "gene_name": "Cngb1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q03041-1", "protein_name": "Cyclic nucleotide-gated channel alpha-2", "gene_name": "CNGA2", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "Q00194-1", "protein_name": "Cyclic 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Endocrinol.", "date": "2003", "authors": "Tsujikawa Hiroshi, Kurotaki Yoko, Fujimori Toshihiko, Fukuda Kazuhiko, Nabeshima Yo-Ichi", "reference": { "type": "PubMed", "id": "14528024", "url": "https://pubmed.ncbi.nlm.nih.gov/14528024" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q64441-1", "protein_name": "1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial", "gene_name": "Cyp24a1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O35082-1", "protein_name": "Klotho", "gene_name": "Kl", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P48281-1", "protein_name": "Vitamin D3 receptor", "gene_name": "Vdr", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q64441", "url": "https://www.uniprot.org/uniprotkb/Q64441" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.14528024", "abstract": "", 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Acta", "date": "1995", "authors": "Itoh S, Yoshimura T, Iemura O, Yamada E, Tsujikawa K, Kohama Y, Mimura T", "reference": { "type": "PubMed", "id": "7578252", "url": "https://pubmed.ncbi.nlm.nih.gov/7578252" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q64441-1", "protein_name": "1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial", "gene_name": "Cyp24a1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q64441", "url": "https://www.uniprot.org/uniprotkb/Q64441" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.7578252", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Dynamic patterns of histone methylation are associated with ontogenic expression of the Cyp3a genes during mouse liver maturation.", "journal": "Molecular pharmacology", "date": "2009", "authors": "Li Y, Cui Y, Hart SN, Klaassen CD, Zhong XB", "reference": { "type": "PubMed", "id": "19188337", "url": "https://pubmed.ncbi.nlm.nih.gov/19188337" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q64481-1", "protein_name": "Cytochrome P450 3A16", "gene_name": "Cyp3a16", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q64481", "url": "https://www.uniprot.org/uniprotkb/Q64481" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.19188337", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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}, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A novel form of mouse cytochrome P450 3A (Cyp3a-16). Its cDNA cloning and expression in fetal liver.", "journal": "Eur. J. Biochem.", "date": "1994", "authors": "Itoh S, Satoh M, Abe Y, Hashimoto H, Yanagimoto T, Kamataki T", "reference": { "type": "PubMed", "id": "7813478", "url": "https://pubmed.ncbi.nlm.nih.gov/7813478" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q64481-1", "protein_name": "Cytochrome P450 3A16", "gene_name": "Cyp3a16", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q64481", "url": "https://www.uniprot.org/uniprotkb/Q64481" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.7813478", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Proteome-wide characterization of N-glycosylation events by diagonal chromatography.", "journal": "Journal of proteome research", "date": "2006", "authors": "Ghesquiere B, Van Damme J, Martens L, Vandekerckhove J, Gevaert K", "reference": { "type": "PubMed", "id": "16944957", "url": "https://pubmed.ncbi.nlm.nih.gov/16944957" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BH35-1", "protein_name": "Complement component C8 beta chain", "gene_name": "C8b", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8VCG4-1", "protein_name": "Complement component C8 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