[ { "title": "The BAL-binding protein BBAP and related Deltex family members exhibit ubiquitin-protein isopeptide ligase activity.", "journal": "J. Biol. Chem.", "date": "2003", "authors": "Takeyama K, Aguiar RC, Gu L, He C, Freeman GJ, Kutok JL, Aster JC, Shipp MA", "reference": { "type": "PubMed", "id": "12670957", "url": "https://pubmed.ncbi.nlm.nih.gov/12670957" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8IXQ6-1", "protein_name": "Protein mono-ADP-ribosyltransferase PARP9", "gene_name": "PARP9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9I9-1", "protein_name": "E3 ubiquitin-protein ligase DTX3", "gene_name": "DTX3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86Y01-1", "protein_name": "E3 ubiquitin-protein ligase DTX1", "gene_name": "DTX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDB6-1", "protein_name": "E3 ubiquitin-protein ligase DTX3L", "gene_name": "DTX3L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86UW9-1", "protein_name": "Probable E3 ubiquitin-protein ligase DTX2", "gene_name": "DTX2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8IXQ6", "url": "https://www.uniprot.org/uniprotkb/Q8IXQ6" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12670957", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "BAL1 and BBAP are regulated by a gamma interferon-responsive bidirectional promoter and are overexpressed in diffuse large B-cell lymphomas with a prominent inflammatory infiltrate.", "journal": "Molecular and cellular biology", "date": "2006", "authors": "Juszczynski P, Kutok JL, Li C, Mitra J, Aguiar RC, Shipp MA", "reference": { "type": "PubMed", "id": "16809771", "url": "https://pubmed.ncbi.nlm.nih.gov/16809771" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8IXQ6-1", "protein_name": "Protein mono-ADP-ribosyltransferase PARP9", "gene_name": "PARP9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDB6-1", "protein_name": "E3 ubiquitin-protein ligase DTX3L", "gene_name": "DTX3L", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8IXQ6", "url": "https://www.uniprot.org/uniprotkb/Q8IXQ6" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16809771", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Determination of Poly (ADP-ribose) polymerase (PARP) homologues in human ejaculated sperm and its correlation with sperm maturation.", "journal": "Fertility and sterility", "date": "2009", "authors": "Jha R, Agarwal A, Mahfouz R, Paasch U, Grunewald S, Sabanegh E, Yadav SP, Sharma R", "reference": { "type": "PubMed", "id": "18339380", "url": "https://pubmed.ncbi.nlm.nih.gov/18339380" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8IXQ6-1", "protein_name": "Protein mono-ADP-ribosyltransferase PARP9", "gene_name": "PARP9", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8IXQ6", "url": "https://www.uniprot.org/uniprotkb/Q8IXQ6" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18339380", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Ubiquitin Modification by the E3 Ligase/ADP-Ribosyltransferase Dtx3L/Parp9.", "journal": "Molecular cell", "date": "2017", "authors": "Yang CS, Jividen K, Spencer A, Dworak N, Ni L, Oostdyk LT, Chatterjee M, Kusmider B, Reon B, Parlak M, Gorbunova V, Abbas T, Jeffery E, Sherman NE, Paschal BM", "reference": { "type": "PubMed", "id": "28525742", "url": "https://pubmed.ncbi.nlm.nih.gov/28525742" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8IXQ6-1", "protein_name": 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"database": "UniProtKB", "id": "Q8IXQ6", "url": "https://www.uniprot.org/uniprotkb/Q8IXQ6" }, { "database": "PubMed", "id": "28525742", "url": "https://pubmed.ncbi.nlm.nih.gov/28525742" } ], "uniprot_canonical_ac": "Q8IXQ6-1" }, { "start_pos": 738, "end_pos": 738, "sequence_org": "F", "sequence_mut": "K", "comment": "Severe reduction in ubiquitin ADP ribosylation. No effect on the interaction with DTX3L and on DTX3LE3 ligase activity. Increases DNA repair.", "evidence": [ { "database": "UniProtKB", "id": "Q8IXQ6", "url": "https://www.uniprot.org/uniprotkb/Q8IXQ6" }, { "database": "PubMed", "id": "28525742", "url": "https://pubmed.ncbi.nlm.nih.gov/28525742" } ], "uniprot_canonical_ac": "Q8IXQ6-1" }, { "start_pos": 766, "end_pos": 769, "sequence_org": "VLTG", "sequence_mut": "", "comment": "Loss of ADP ribosylation activity and interaction with DTX3L.", "evidence": [ { "database": "UniProtKB", "id": "Q8IXQ6", "url": "https://www.uniprot.org/uniprotkb/Q8IXQ6" }, { "database": "PubMed", "id": "28525742", "url": "https://pubmed.ncbi.nlm.nih.gov/28525742" } ], "uniprot_canonical_ac": "Q8IXQ6-1" }, { "start_pos": 780, "end_pos": 784, "sequence_org": "VPPPL", "sequence_mut": "", "comment": "Reduces ADP ribosylation activity and interaction with DTX3L.", "evidence": [ { "database": "UniProtKB", "id": "Q8IXQ6", "url": "https://www.uniprot.org/uniprotkb/Q8IXQ6" }, { "database": "PubMed", "id": "28525742", "url": 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Part A", "date": "2020-11", "authors": "Meyer Robert, Elbracht Miriam, Opladen Thomas, Eggermann Thomas", "reference": { "type": "PubMed", "id": "32857899", "url": "https://pubmed.ncbi.nlm.nih.gov/32857899" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q14703-1", "protein_name": "Membrane-bound transcription factor site-1 protease", "gene_name": "MBTPS1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q14703", "url": "https://www.uniprot.org/uniprotkb/Q14703" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.32857899", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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"journal": "Cells", "date": "2024-01-18", "authors": "Santinelli Rapha\u00ebl, Benz Nathalie, Guellec Julie, Quinquis Fabien, Kocas Ervin, Thomas Johan, Montier Tristan, Ka Chandran, Luczka-Maj\u00e9rus Emilie, Sage Edouard, F\u00e9rec Claude, Coraux Christelle, Trouv\u00e9 Pascal", "reference": { "type": "PubMed", "id": "38247876", "url": "https://pubmed.ncbi.nlm.nih.gov/38247876" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q14703-1", "protein_name": "Membrane-bound transcription factor site-1 protease", "gene_name": "MBTPS1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q14703", "url": "https://www.uniprot.org/uniprotkb/Q14703" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.38247876", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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progression and metastasis via the PKM2 dependent glucose metabolism.", "journal": "Redox biology", "date": "2022", "authors": "Zhou Q, Yin Y, Yu M, Gao D, Sun J, Yang Z, Weng J, Chen W, Atyah M, Shen Y, Ye Q, Li CW, Hung MC, Dong Q, Zhou C, Ren N", "reference": { "type": "PubMed", "id": "36116159", "url": "https://pubmed.ncbi.nlm.nih.gov/36116159" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BZE4-1", "protein_name": "GTP-binding protein 4", "gene_name": "GTPBP4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BZE4", "url": "https://www.uniprot.org/uniprotkb/Q9BZE4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.36116159", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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[] } ] }, { "title": "Down-regulation of ZNF252P-AS1 alleviates ovarian cancer progression by binding miR-324-3p to downregulate LY6K.", "journal": "Journal of ovarian research", "date": "2022", "authors": "Geng L, Wang Z, Tian Y", "reference": { "type": "PubMed", "id": "34980214", "url": "https://pubmed.ncbi.nlm.nih.gov/34980214" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q17RY6-1", "protein_name": "Lymphocyte antigen 6K", "gene_name": "LY6K", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q17RY6", "url": "https://www.uniprot.org/uniprotkb/Q17RY6" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.34980214", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": 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