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Acta", "date": "2002", "authors": "Takahashi I, Kameoka Y, Hashimoto K", "reference": { "type": "PubMed", "id": "12183056", "url": "https://pubmed.ncbi.nlm.nih.gov/12183056" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9QZQ8-2", "protein_name": "Core histone macro-H2A.1", "gene_name": "Macroh2a1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6ZWS8-1", "protein_name": "Speckle-type POZ protein", "gene_name": "Spop", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9QZQ8", "url": "https://www.uniprot.org/uniprotkb/Q9QZQ8" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.12183056", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Dynamic relocation of epigenetic chromatin markers reveals an active role of constitutive heterochromatin in the transition from proliferation to quiescence.", "journal": "J. 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Biol. 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Natl. Acad. Sci. U.S.A.", "date": "2012", "authors": "Bankston John R, Camp Stacey S, DiMaio Frank, Lewis Alan S, Chetkovich Dane M, Zagotta William N", "reference": { "type": "PubMed", "id": "22550182", "url": "https://pubmed.ncbi.nlm.nih.gov/22550182" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O88703-1", "protein_name": "Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2", "gene_name": "Hcn2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C437-1", "protein_name": "PEX5-related protein", "gene_name": "Pex5l", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O88703", "url": "https://www.uniprot.org/uniprotkb/O88703" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.22550182", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Local and global interpretations of a disease-causing mutation near the ligand entry path in hyperpolarization-activated cAMP-gated channel.", "journal": "Structure (London, England : 1993)", "date": "2012", "authors": "Xu X, Marni F, Wu S, Su Z, Musayev F, Shrestha S, Xie C, Gao W, Liu Q, Zhou L", "reference": { "type": "PubMed", "id": "23103389", "url": "https://pubmed.ncbi.nlm.nih.gov/23103389" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O88703-1", "protein_name": "Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2", "gene_name": "Hcn2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9Y3Q4-1", "protein_name": "Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4", "gene_name": "HCN4", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O88703", "url": "https://www.uniprot.org/uniprotkb/O88703" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 594, "end_pos": 594, "sequence_org": "S", "sequence_mut": "R", "comment": "Shifts channel activation to more negative voltage, slows channel opening and speeds up channel closure. 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Nucleotide-Gated Channel 2 via the EP2 Receptor in Trigeminal Ganglion Neurons of Mice.", "journal": "International journal of molecular sciences", "date": "2021", "authors": "Kwon J, Choi YI, Jo HJ, Lee SH, Lee HK, Kim H, Moon JY, Jung SJ", "reference": { "type": "PubMed", "id": "34948328", "url": "https://pubmed.ncbi.nlm.nih.gov/34948328" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O88703-1", "protein_name": "Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2", "gene_name": "Hcn2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O88703", "url": "https://www.uniprot.org/uniprotkb/O88703" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.34948328", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ 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N-src identifies a new brain specific ion channel protein, with homology to eag and cyclic nucleotide-gated channels.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "1997", "authors": "Santoro B, Grant SG, Bartsch D, Kandel ER", "reference": { "type": "PubMed", "id": "9405696", "url": "https://pubmed.ncbi.nlm.nih.gov/9405696" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O88704-1", "protein_name": "Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1", "gene_name": "Hcn1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O88704", "url": "https://www.uniprot.org/uniprotkb/O88704" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "glycosylation": [ { "glytoucan_ac": "", "type": "N-linked", "subtype": "other", "prediction_tool_list": [], "site_category": "reported", "site_category_dict": { "reported": true }, "site_seq": "N", "relation": "attached", "comment": "N-linked (GlcNAc...) asparagine", "icn3d_view": {}, "start_pos": 327, "start_aa": "Asn", "end_pos": 327, "end_aa": "Asn", "residue": "Asn", "site_lbl": "Asn327", "evidence": [ { "id": "O88704", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/O88704#ptm_processing" }, { "id": "9405696", "database": "PubMed", "url": "https://pubmed.ncbi.nlm.nih.gov/9405696" } ], "filter_code": "001000000000000000000.00010000000000.00.01000", "uniprot_canonical_ac": "O88704-1" } ], "record_id": "pubmed.9405696", "abstract": "", "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 1 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_n_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl", "filter_code", "uniprot_canonical_ac" ] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Phosphorylation of high-mobility group protein A2 by Nek2 kinase during the first meiotic division in mouse spermatocytes.", "journal": "Molecular biology of the cell", "date": "2004", "authors": "Di Agostino S, Fedele M, Chieffi P, Fusco A, Rossi P, Geremia R, Sette C", "reference": { "type": "PubMed", "id": "14668482", "url": "https://pubmed.ncbi.nlm.nih.gov/14668482" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P52927-1", "protein_name": "High mobility group protein HMGI-C", "gene_name": "Hmga2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O35942-1", "protein_name": "Serine/threonine-protein kinase Nek2", "gene_name": "Nek2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P52927", "url": "https://www.uniprot.org/uniprotkb/P52927" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.14668482", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "cDNA cloning of the HMGI-C phosphoprotein, a nuclear protein associated with neoplastic and undifferentiated phenotypes.", "journal": "Nucleic Acids Res.", "date": "1991", "authors": "Manfioletti G, Giancotti V, Bandiera A, Buratti E, Sautiere P, Cary P, Crane-Robinson C, Coles B, Goodwin GH", "reference": { "type": "PubMed", "id": "1762909", "url": "https://pubmed.ncbi.nlm.nih.gov/1762909" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P52927-1", "protein_name": "High mobility group protein HMGI-C", "gene_name": "Hmga2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P52927", "url": "https://www.uniprot.org/uniprotkb/P52927" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.1762909", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Chemical reporters for fluorescent detection and identification of O-GlcNAc-modified proteins reveal glycosylation of the ubiquitin ligase NEDD4-1.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2011", "authors": "Zaro BW, Yang YY, Hang HC, Pratt MR", "reference": { "type": "PubMed", "id": "21540332", "url": "https://pubmed.ncbi.nlm.nih.gov/21540332" }, "referenced_glycans": [ { "glytoucan_ac": "G49108TO" } ], "referenced_proteins": [ { "uniprot_canonical_ac": "P52927-1", "protein_name": "High mobility group protein HMGI-C", "gene_name": "Hmga2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P63242-1", "protein_name": "Eukaryotic translation initiation factor 5A-1", "gene_name": "Eif5a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9DCL9-1", "protein_name": "Bifunctional phosphoribosylaminoimidazole carboxylase/phosphoribosylaminoimidazole succinocarboxamide synthetase", "gene_name": "Paics", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O55023-1", "protein_name": "Inositol monophosphatase 1", "gene_name": "Impa1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P24547-1", "protein_name": "Inosine-5'-monophosphate dehydrogenase 2", "gene_name": "Impdh2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8K310-1", "protein_name": "Matrin-3", "gene_name": "Matr3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q12778-1", "protein_name": "Forkhead box protein O1", "gene_name": "FOXO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07091-1", "protein_name": "Protein S100-A4", "gene_name": "S100a4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P16092-1", "protein_name": "Fibroblast growth factor receptor 1", "gene_name": "Fgfr1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q61033-1", "protein_name": "Lamina-associated polypeptide 2, isoforms alpha/zeta", "gene_name": "Tmpo", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O70433-1", "protein_name": "Four and a half LIM domains protein 2", "gene_name": "Fhl2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8WTY4-1", "protein_name": "Anamorsin", "gene_name": "Ciapin1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P07901-1", "protein_name": "Heat shock protein HSP 90-alpha", "gene_name": "Hsp90aa1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P18760-1", "protein_name": "Cofilin-1", "gene_name": "Cfl1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O35516-1", "protein_name": "Neurogenic locus notch homolog protein 2", "gene_name": "Notch2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q923D5-1", "protein_name": "WW domain-binding protein 11", "gene_name": "Wbp11", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q62318-1", "protein_name": "Transcription intermediary factor 1-beta", "gene_name": "Trim28", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JIF0-1", "protein_name": "Protein arginine N-methyltransferase 1", "gene_name": "Prmt1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8K4G5-1", "protein_name": "Actin-binding LIM protein 1", "gene_name": "Ablim1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TPR4-1", "protein_name": "Alpha-actinin-1", "gene_name": "Actn1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P07356-1", "protein_name": "Annexin A2", "gene_name": "Anxa2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P62259-1", "protein_name": "14-3-3 protein epsilon", "gene_name": "Ywhae", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P51881-1", "protein_name": "ADP/ATP translocase 2", "gene_name": "Slc25a5", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P10107-1", "protein_name": "Annexin A1", "gene_name": "Anxa1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BTM8-1", "protein_name": "Filamin-A", "gene_name": "Flna", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q3U0V1-1", "protein_name": "Far upstream element-binding protein 2", "gene_name": "Khsrp", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P07742-1", "protein_name": "Ribonucleoside-diphosphate reductase large subunit", "gene_name": "Rrm1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P30416-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase FKBP4", "gene_name": "Fkbp4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JIK5-1", "protein_name": "Nucleolar RNA helicase 2", "gene_name": "Ddx21", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9CZD3-1", "protein_name": "Glycine--tRNA ligase", "gene_name": "Gars1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P52480-1", "protein_name": "Pyruvate kinase PKM", "gene_name": "Pkm", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BFW7-1", "protein_name": "Lipoma-preferred partner homolog", "gene_name": "Lpp", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9Z1F9-1", "protein_name": "SUMO-activating enzyme subunit 2", "gene_name": "Uba2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CGC7-1", "protein_name": "Bifunctional glutamate/proline--tRNA ligase", "gene_name": "Eprs1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P49312-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein A1", "gene_name": "Hnrnpa1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P45377-1", "protein_name": "Aldose reductase-related protein 2", "gene_name": "Akr1b8", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O35855-1", "protein_name": "Branched-chain-amino-acid aminotransferase, mitochondrial", "gene_name": "Bcat2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P47941-1", "protein_name": "Crk-like protein", "gene_name": "Crkl", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9DBW0-1", "protein_name": "Cytochrome P450 4V2", "gene_name": "Cyp4v2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O09172-1", "protein_name": "Glutamate--cysteine ligase regulatory subunit", "gene_name": "Gclm", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P09066-1", "protein_name": "Homeobox protein engrailed-2", "gene_name": "En2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q00519-1", "protein_name": "Xanthine dehydrogenase/oxidase", "gene_name": "Xdh", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P53026-1", "protein_name": "Large ribosomal subunit protein uL1", "gene_name": "Rpl10a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P14869-1", "protein_name": "Large ribosomal subunit protein uL10", "gene_name": "Rplp0", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q64343-1", "protein_name": "ATP-binding cassette sub-family G member 1", "gene_name": 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"date": "2024-02-20", "authors": "Maharaj Avinaash V, Cottrell Emily, Thanasupawat Thatchawan, Joustra Sjoerd D, Triggs-Raine Barbara, Fujimoto Masanobu, Kant Sarina G, van der Kaay Danielle, Clement-de Boers Agnes, Brooks Alice S, Aguirre Gabriel Amador, Mart\u00edn Del Estal Irene, Castilla de Cort\u00e1zar Larrea Mar\u00eda Inmaculada, Massoud Ahmed, van Duyvenvoorde Hermine A, De Bruin Christiaan, Hwa Vivian, Klonisch Thomas, Hombach-Klonisch Sabine, Storr Helen L", "reference": { "type": "PubMed", "id": "38516887", "url": "https://pubmed.ncbi.nlm.nih.gov/38516887" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P52927-1", "protein_name": "High mobility group protein HMGI-C", "gene_name": "Hmga2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P52927", "url": "https://www.uniprot.org/uniprotkb/P52927" } ], "common_name": "Mouse", "glygen_name": "Mouse", 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[] } ] }, { "title": "Genomic structure and expression of the murine Hmgi-c gene.", "journal": "Nucleic Acids Res.", "date": "1996", "authors": "Zhou X, Benson K F, Przybysz K, Liu J, Hou Y, Cherath L, Chada K", "reference": { "type": "PubMed", "id": "8918814", "url": "https://pubmed.ncbi.nlm.nih.gov/8918814" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P52927-1", "protein_name": "High mobility group protein HMGI-C", "gene_name": "Hmga2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P52927", "url": "https://www.uniprot.org/uniprotkb/P52927" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.8918814", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", 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Natl. Acad. Sci. 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the structure and regulation of the murine gene encoding gut-enriched Kr\u00fcppel-like factor (Kr\u00fcppel-like factor 4).", "journal": "Nucleic acids research", "date": "1999-12-01", "authors": "Mahatan C S, Kaestner K H, Geiman D E, Yang V W", "reference": { "type": "PubMed", "id": "10556311", "url": "https://pubmed.ncbi.nlm.nih.gov/10556311" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q60793-1", "protein_name": "Krueppel-like factor 4", "gene_name": "Klf4", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q60793", "url": "https://www.uniprot.org/uniprotkb/Q60793" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.10556311", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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Cell Res.", "date": "2002", "authors": "Chen Zhi Y, Shie Jue Lon, Tseng Chi Chuan", "reference": { "type": "PubMed", "id": "12441126", "url": "https://pubmed.ncbi.nlm.nih.gov/12441126" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q60793-1", "protein_name": "Krueppel-like factor 4", "gene_name": "Klf4", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q60793", "url": "https://www.uniprot.org/uniprotkb/Q60793" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.12441126", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors.", "journal": "Cell", "date": "2006", "authors": "Takahashi Kazutoshi, Yamanaka Shinya", "reference": { "type": "PubMed", "id": "16904174", "url": "https://pubmed.ncbi.nlm.nih.gov/16904174" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q60793-1", "protein_name": "Krueppel-like factor 4", "gene_name": "Klf4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P48432-1", "protein_name": "Transcription factor SOX-2", "gene_name": "Sox2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P01108-1", "protein_name": "Myc proto-oncogene protein", "gene_name": "Myc", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P20263-1", "protein_name": "POU domain, class 5, transcription factor 1", "gene_name": "Pou5f1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 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"Klf4 cooperates with Oct3/4 and Sox2 to activate the Lefty1 core promoter in embryonic stem cells.", "journal": "Molecular and cellular biology", "date": "2006-10", "authors": "Nakatake Yuhki, Fukui Nobutaka, Iwamatsu Yuko, Masui Shinji, Takahashi Kadue, Yagi Rika, Yagi Kiyohito, Miyazaki Jun-Ichi, Matoba Ryo, Ko Minoru S H, Niwa Hitoshi", "reference": { "type": "PubMed", "id": "16954384", "url": "https://pubmed.ncbi.nlm.nih.gov/16954384" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q60793-1", "protein_name": "Krueppel-like factor 4", "gene_name": "Klf4", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q60793", "url": "https://www.uniprot.org/uniprotkb/Q60793" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.16954384", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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Piatigorsky Joram", "reference": { "type": "PubMed", "id": "17060454", "url": "https://pubmed.ncbi.nlm.nih.gov/17060454" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q60793-1", "protein_name": "Krueppel-like factor 4", "gene_name": "Klf4", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q60793", "url": "https://www.uniprot.org/uniprotkb/Q60793" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.17060454", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Expression of the gut-enriched Kruppel-like factor gene during development and intestinal tumorigenesis.", "journal": "FEBS letters", "date": "1997", "authors": "Ton-That H, Kaestner KH, Shields JM, Mahatanankoon CS, Yang VW", "reference": { "type": "PubMed", "id": "9428642", "url": "https://pubmed.ncbi.nlm.nih.gov/9428642" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q60793-1", "protein_name": "Krueppel-like factor 4", "gene_name": "Klf4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O43474-3", "protein_name": "Krueppel-like factor 4", "gene_name": "KLF4", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q60793", "url": "https://www.uniprot.org/uniprotkb/Q60793" } ], "common_name": "Mouse", "glygen_name": "Mouse", 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Biol.", "date": "2002", "authors": "Mak Winifred, Baxter Jonathon, Silva Jose, Newall Alistair E, Otte Arie P, Brockdorff Neil", "reference": { "type": "PubMed", "id": "12123576", "url": "https://pubmed.ncbi.nlm.nih.gov/12123576" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q921E6-1", "protein_name": "Polycomb protein EED", "gene_name": "Eed", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q61188-1", "protein_name": "Histone-lysine N-methyltransferase EZH2", "gene_name": "Ezh2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q921E6", "url": "https://www.uniprot.org/uniprotkb/Q921E6" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.12123576", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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Kathleen A, Wang Hengbin, de la Cruz Cecile C, Otte Arie P, Panning Barbara, Zhang Yi", "reference": { "type": "PubMed", "id": "12649488", "url": "https://pubmed.ncbi.nlm.nih.gov/12649488" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q921E6-1", "protein_name": "Polycomb protein EED", "gene_name": "Eed", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O75530-1", "protein_name": "Polycomb protein EED", "gene_name": "EED", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q61188-1", "protein_name": "Histone-lysine N-methyltransferase EZH2", "gene_name": "Ezh2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q921E6", "url": "https://www.uniprot.org/uniprotkb/Q921E6" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.12649488", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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