[ { "title": "Depletion of Mab21l1 and Mab21l2 messages in mouse embryo arrests axial turning, and impairs notochord and neural tube differentiation.", "journal": "Teratology", "date": "2002", "authors": "Wong RL, Chow KL", "reference": { "type": "PubMed", "id": "11857508", "url": "https://pubmed.ncbi.nlm.nih.gov/11857508" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O70299-1", "protein_name": "Putative nucleotidyltransferase MAB21L1", "gene_name": "Mab21l1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BPP1-1", "protein_name": "Protein mab-21-like 2", "gene_name": "Mab21l2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O70299", "url": "https://www.uniprot.org/uniprotkb/O70299" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.11857508", "abstract": "", "glycosylation": [], "mutagenesis": 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Cell. Physiol.", "date": "2007", "authors": "Kim YJ, Kim BG, Lee SJ, Lee HK, Lee SH, Ryoo HM, Cho JY", "reference": { "type": "PubMed", "id": "17167770", "url": "https://pubmed.ncbi.nlm.nih.gov/17167770" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O70299-1", "protein_name": "Putative nucleotidyltransferase MAB21L1", "gene_name": "Mab21l1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9Z2U4-1", "protein_name": "ETS-related transcription factor Elf-4", "gene_name": "Elf4", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "O70299", "url": "https://www.uniprot.org/uniprotkb/O70299" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.17167770", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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Commun.", "date": "2008", "authors": "Miura Kenji, Imaki Junko", "reference": { "type": "PubMed", "id": "18241670", "url": "https://pubmed.ncbi.nlm.nih.gov/18241670" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BML1-4", "protein_name": "[F-actin]-monooxygenase MICAL2", "gene_name": "Mical2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BML1", "url": "https://www.uniprot.org/uniprotkb/Q8BML1" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.18241670", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cloning, genetic characterization, and chromosomal mapping of the mouse VDUP1 gene.", "journal": "Gene", "date": "2001", "authors": "Ludwig DL, Kotanides H, Le T, Chavkin D, Bohlen P, Witte L", "reference": { "type": "PubMed", "id": "11376942", "url": "https://pubmed.ncbi.nlm.nih.gov/11376942" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BG60-1", "protein_name": "Thioredoxin-interacting protein", "gene_name": "Txnip", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BG60", "url": "https://www.uniprot.org/uniprotkb/Q8BG60" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.11376942", "abstract": "", "glycosylation": 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Su-Sung, Lee Young-Ho, Song Kyu-Sang, Kim Yong-Man, Yu Dae-Yeul, Choi Inpyo", "reference": { "type": "PubMed", "id": "15723808", "url": "https://pubmed.ncbi.nlm.nih.gov/15723808" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BG60-1", "protein_name": "Thioredoxin-interacting protein", "gene_name": "Txnip", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BG60", "url": "https://www.uniprot.org/uniprotkb/Q8BG60" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.15723808", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"date": "2024-06-06", "authors": "Dong Wenkang, Imdad Laraib, Xu Shengnan, Wang Yinli, Liu Chengzhi, Song Shiyu, Li Zechuan, Kong Ying, Kong Li, Ren Xiang", "reference": { "type": "PubMed", "id": "38892474", "url": "https://pubmed.ncbi.nlm.nih.gov/38892474" }, "referenced_glycans": [ { "glytoucan_ac": "G49108TO" } ], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BG60-1", "protein_name": "Thioredoxin-interacting protein", "gene_name": "Txnip", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BG60", "url": "https://www.uniprot.org/uniprotkb/Q8BG60" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "glycosylation": [ { "glytoucan_ac": "G49108TO", "type": "O-linked", "subtype": "O-GlcNAcylation", "prediction_tool_list": [], "site_category": "reported_with_glycan", "site_category_dict": { "reported_with_glycan": true }, "site_seq": "", "relation": 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"count": 1 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "filter_code", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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Cell Sci.", "date": "1996", "authors": "de la Luna S, Burden M J, Lee C W, La Thangue N B", "reference": { "type": "PubMed", "id": "8923205", "url": "https://pubmed.ncbi.nlm.nih.gov/8923205" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q64163-1", "protein_name": "Transcription factor Dp-2", "gene_name": "Tfdp2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q64163", "url": "https://www.uniprot.org/uniprotkb/Q64163" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.8923205", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of four mammalian Numb protein isoforms: Identification of cytoplasmic and membrane-associated variants of the phosphotyrosine binding domain.", "journal": "J. 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Chem.", "date": "1999", "authors": "Dho S E, French M B, Woods S A, McGlade C J", "reference": { "type": "PubMed", "id": "10551880", "url": "https://pubmed.ncbi.nlm.nih.gov/10551880" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9QZS3-1", "protein_name": "Protein numb homolog", "gene_name": "Numb", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9QZS3", "url": "https://www.uniprot.org/uniprotkb/Q9QZS3" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.10551880", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "LNX functions as a RING type E3 ubiquitin ligase that targets the cell fate determinant Numb for ubiquitin-dependent degradation.", "journal": "The EMBO journal", "date": "2002", "authors": "Nie J, McGill MA, Dermer M, Dho SE, Wolting CD, McGlade CJ", "reference": { "type": "PubMed", "id": "11782429", "url": "https://pubmed.ncbi.nlm.nih.gov/11782429" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9QZS3-1", "protein_name": "Protein numb homolog", "gene_name": "Numb", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O70263-1", "protein_name": "E3 ubiquitin-protein ligase LNX", "gene_name": "Lnx1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9QZS3", "url": "https://www.uniprot.org/uniprotkb/Q9QZS3" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 48, "end_pos": 48, "sequence_org": "C", "sequence_mut": "A", "comment": "Loss of function.", "evidence": [ { "database": "UniProtKB", "id": "O70263", "url": "https://www.uniprot.org/uniprotkb/O70263" }, { "database": "PubMed", "id": "11782429", "url": "https://pubmed.ncbi.nlm.nih.gov/11782429" } ], "uniprot_canonical_ac": "O70263-1" } ], "record_id": "pubmed.11782429", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Progenitor cell maintenance requires numb and numblike during mouse neurogenesis.", "journal": "Nature", "date": "2002", "authors": "Petersen PH, Zou K, Hwang JK, Jan YN, Zhong W", "reference": { "type": "PubMed", "id": "12410312", "url": "https://pubmed.ncbi.nlm.nih.gov/12410312" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9QZS3-1", "protein_name": "Protein numb homolog", "gene_name": "Numb", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O08919-1", "protein_name": "Numb-like protein", "gene_name": "Numbl", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9QZS3", "url": "https://www.uniprot.org/uniprotkb/Q9QZS3" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": 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}, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Distinct expression patterns of splicing isoforms of mNumb in the endocrine lineage of developing pancreas.", "journal": "Differentiation; research in biological diversity", "date": "2003", "authors": "Yoshida T, Tokunaga A, Nakao K, Okano H", "reference": { "type": "PubMed", "id": "14641329", "url": "https://pubmed.ncbi.nlm.nih.gov/14641329" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9QZS3-1", "protein_name": "Protein numb homolog", "gene_name": "Numb", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9QZS3", "url": "https://www.uniprot.org/uniprotkb/Q9QZS3" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.14641329", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { 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"table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Continuing role for mouse Numb and Numbl in maintaining progenitor cells during cortical neurogenesis.", "journal": "Nature neuroscience", "date": "2004-08", "authors": "Petersen Petur H, Zou Kaiyong, Krauss Stefan, Zhong Weimin", "reference": { "type": "PubMed", "id": "15273690", "url": "https://pubmed.ncbi.nlm.nih.gov/15273690" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9QZS3-1", "protein_name": "Protein numb homolog", "gene_name": "Numb", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O08919-1", "protein_name": "Numb-like protein", "gene_name": "Numbl", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9QZS3", "url": "https://www.uniprot.org/uniprotkb/Q9QZS3" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.15273690", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Postnatal deletion of Numb/Numblike reveals repair and remodeling capacity in the subventricular neurogenic niche.", "journal": "Cell", "date": "2006-12-15", "authors": "Kuo Chay T, Mirzadeh Zaman, Soriano-Navarro Mario, Rasin Mladen, Wang Denan, Shen Jie, Sestan Nenad, Garcia-Verdugo Jose, Alvarez-Buylla Arturo, Jan Lily Y, Jan Yuh-Nung", "reference": { "type": "PubMed", "id": "17174898", "url": "https://pubmed.ncbi.nlm.nih.gov/17174898" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9QZS3-1", "protein_name": "Protein numb homolog", "gene_name": "Numb", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O08919-1", "protein_name": "Numb-like protein", "gene_name": "Numbl", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9QZS3", "url": "https://www.uniprot.org/uniprotkb/Q9QZS3" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.17174898", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "EGFR Signaling Termination via Numb Trafficking in Ependymal Progenitors Controls Postnatal Neurogenic Niche Differentiation.", "journal": "Cell reports", "date": "2019", "authors": "Abdi K, Neves G, Pyun J, Kiziltug E, Ahrens A, Kuo CT", "reference": { "type": "PubMed", "id": "31433979", "url": "https://pubmed.ncbi.nlm.nih.gov/31433979" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9QZS3-1", "protein_name": "Protein numb homolog", "gene_name": "Numb", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9QZS3", "url": "https://www.uniprot.org/uniprotkb/Q9QZS3" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "phosphorylation": [ { "start_pos": 276, "end_pos": 276, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine; by CaMK1", "evidence": [ { "database": "UniProtKB", "id": "Q9QZS3", "url": "https://www.uniprot.org/uniprotkb/Q9QZS3" }, { "database": "iPTMnet", "id": "Q9QZS3", "url": 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Characterization of binding specificity and identification of a novel PDZ domain-containing numb binding protein, LNX.", "journal": "J. Biol. Chem.", "date": "1998", "authors": "Dho SE, Jacob S, Wolting CD, French MB, Rohrschneider LR, McGlade CJ", "reference": { "type": "PubMed", "id": "9535908", "url": "https://pubmed.ncbi.nlm.nih.gov/9535908" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9QZS3-1", "protein_name": "Protein numb homolog", "gene_name": "Numb", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8TBB1-1", "protein_name": "E3 ubiquitin-protein ligase LNX", "gene_name": "LNX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O70263-1", "protein_name": "E3 ubiquitin-protein ligase LNX", "gene_name": "Lnx1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9QZS3", "url": "https://www.uniprot.org/uniprotkb/Q9QZS3" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 181, "end_pos": 181, "sequence_org": "P", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "ABCD4 is associated with mammary gland development in mammals.", "journal": "BMC genomics", "date": "2024-05-20", "authors": "Guo Xiaoli, Zhao Chengcheng, Yang Ruifei, Wang Yuzhe, Hu Xiaoxiang", "reference": { "type": "PubMed", "id": "38764031", "url": "https://pubmed.ncbi.nlm.nih.gov/38764031" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O89016-1", "protein_name": "Lysosomal cobalamin transporter ABCD4", "gene_name": "Abcd4", "tax_name": "Mouse" } ], "species": [ { 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essential for secondary PIWI interacting RNA biogenesis in mice.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2013", "authors": "Pandey RR, Tokuzawa Y, Yang Z, Hayashi E, Ichisaka T, Kajita S, Asano Y, Kunieda T, Sachidanandam R, Chuma S, Yamanaka S, Pillai RS", "reference": { "type": "PubMed", "id": "24067652", "url": "https://pubmed.ncbi.nlm.nih.gov/24067652" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9CWU0-1", "protein_name": "Putative ATP-dependent RNA helicase TDRD12", "gene_name": "Tdrd12", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q99MV1-1", "protein_name": "Tudor domain-containing protein 1", "gene_name": "Tdrd1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CDG1-1", "protein_name": "Piwi-like protein 2", "gene_name": "Piwil2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9CWU0", 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Biol.", "date": "1995", "authors": "Meier P, Koedood M, Philipp J, Fontana A, Mitchell P J", "reference": { "type": "PubMed", "id": "7750631", "url": "https://pubmed.ncbi.nlm.nih.gov/7750631" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P34056-1", "protein_name": "Transcription factor AP-2-alpha", "gene_name": "Tfap2a", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P34056", "url": "https://www.uniprot.org/uniprotkb/P34056" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.7750631", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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