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Chem.", "date": "2001", "authors": "Porsch-Ozcurumez M, Langmann T, Heimerl S, Borsukova H, Kaminski WE, Drobnik W, Honer C, Schumacher C, Schmitz G", "reference": { "type": "PubMed", "id": "11279031", "url": "https://pubmed.ncbi.nlm.nih.gov/11279031" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O95125-1", "protein_name": "Zinc finger protein 202", "gene_name": "ZNF202", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95477-1", "protein_name": "Phospholipid-transporting ATPase ABCA1", "gene_name": "ABCA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45844-1", "protein_name": "ATP-binding cassette sub-family G member 1", "gene_name": "ABCG1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O95125", "url": "https://www.uniprot.org/uniprotkb/O95125" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": 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"The mammalian exosome mediates the efficient degradation of mRNAs that contain AU-rich elements.", "journal": "The EMBO journal", "date": "2002", "authors": "Mukherjee D, Gao M, O'Connor JP, Raijmakers R, Pruijn G, Lutz CS, Wilusz J", "reference": { "type": "PubMed", "id": "11782436", "url": "https://pubmed.ncbi.nlm.nih.gov/11782436" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NQT5-1", "protein_name": "Exosome complex component RRP40", "gene_name": "EXOSC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06265-1", "protein_name": "Exosome complex component RRP45", "gene_name": "EXOSC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQT4-1", "protein_name": "Exosome complex component RRP46", "gene_name": "EXOSC5", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NQT5", "url": "https://www.uniprot.org/uniprotkb/Q9NQT5" } ], "common_name": "Human", 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genetics", "date": "2012", "authors": "Wan J, Yourshaw M, Mamsa H, Rudnik-Schoneborn S, Menezes MP, Hong JE, Leong DW, Senderek J, Salman MS, Chitayat D, Seeman P, von Moers A, Graul-Neumann L, Kornberg AJ, Castro-Gago M, Sobrido MJ, Sanefuji M, Shieh PB, Salamon N, Kim RC, Vinters HV, Chen Z, Zerres K, Ryan MM, Nelson SF, Jen JC", "reference": { "type": "PubMed", "id": "22544365", "url": "https://pubmed.ncbi.nlm.nih.gov/22544365" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NQT5-1", "protein_name": "Exosome complex component RRP40", "gene_name": "EXOSC3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NQT5", "url": "https://www.uniprot.org/uniprotkb/Q9NQT5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22544365", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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Res.", "date": "2008", "authors": "Covarrubias Manuel, Bhattacharji Aditya, De Santiago-Castillo Jose A, Dougherty Kevin, Kaulin Yuri A, Na-Phuket Thanawath Ratanadilok, Wang Guangyu", "reference": { "type": "PubMed", "id": "18357523", "url": "https://pubmed.ncbi.nlm.nih.gov/18357523" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NZV8-1", "protein_name": "A-type voltage-gated potassium channel KCND2", "gene_name": "KCND2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63881-1", "protein_name": "A-type voltage-gated potassium channel KCND2", "gene_name": "Kcnd2", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q9Z0V2-1", "protein_name": "A-type voltage-gated potassium channel KCND2", "gene_name": "Kcnd2", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NZV8", "url": "https://www.uniprot.org/uniprotkb/Q9NZV8" } ], "common_name": "Human", "glygen_name": "Human", 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Res.", "date": "2009", "authors": "El-Haou Sa\u00efd, Balse Elise, Neyroud Nathalie, Dilanian Gilles, Gavillet Bruno, Abriel Hugues, Coulombe Alain, Jeromin Andreas, Hatem St\u00e9phane N", "reference": { "type": "PubMed", "id": "19213956", "url": "https://pubmed.ncbi.nlm.nih.gov/19213956" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NZV8-1", "protein_name": "A-type voltage-gated potassium channel KCND2", "gene_name": "KCND2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q62696-1", "protein_name": "Disks large homolog 1", "gene_name": "Dlg1", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q62897-1", "protein_name": "A-type voltage-gated potassium channel KCND3", "gene_name": "Kcnd3", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q63881-1", "protein_name": "A-type voltage-gated potassium channel KCND2", "gene_name": "Kcnd2", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q12959-1", "protein_name": "Disks large homolog 1", "gene_name": 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Struct. Mol. Biol.", "date": "2008", "authors": "Spink Benjamin J, Sivaramakrishnan Sivaraj, Lipfert Jan, Doniach Sebastian, Spudich James A", "reference": { "type": "PubMed", "id": "18511944", "url": "https://pubmed.ncbi.nlm.nih.gov/18511944" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UM54-3", "protein_name": "Unconventional myosin-VI", "gene_name": "MYO6", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UM54", "url": "https://www.uniprot.org/uniprotkb/Q9UM54" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18511944", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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Nephrol.", "date": "2003", "authors": "Maruyama Kyoko, Iijima Kazumoto, Ikeda Masahiro, Kitamura Akiko, Tsukaguchi Hiroyasu, Yoshiya Kunihiko, Hoshii Sakurako, Wada Naohiro, Uemura Osamu, Satomura Kenichi, Honda Masataka, Yoshikawa Norishige", "reference": { "type": "PubMed", "id": "12687458", "url": "https://pubmed.ncbi.nlm.nih.gov/12687458" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NP85-1", "protein_name": "Podocin", "gene_name": "NPHS2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NP85", "url": "https://www.uniprot.org/uniprotkb/Q9NP85" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12687458", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": 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E, Bak M, Aksu N, Oner A, Anarat A, Donmez O, Yildiz N, Sever L, Tabel Y, Dusunsel R, Sonmez F, Cakar N", "reference": { "type": "PubMed", "id": "17899208", "url": "https://pubmed.ncbi.nlm.nih.gov/17899208" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NP85-1", "protein_name": "Podocin", "gene_name": "NPHS2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NP85", "url": "https://www.uniprot.org/uniprotkb/Q9NP85" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17899208", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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Iranian children.", "journal": "Iranian journal of kidney diseases", "date": "2013", "authors": "Basiratnia M, Yavarian M, Torabinezhad S, Erjaee A", "reference": { "type": "PubMed", "id": "24072147", "url": "https://pubmed.ncbi.nlm.nih.gov/24072147" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NP85-1", "protein_name": "Podocin", "gene_name": "NPHS2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NP85", "url": "https://www.uniprot.org/uniprotkb/Q9NP85" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.24072147", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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Biol.", "date": "1989", "authors": "Iizasa T, Taira M, Shimada H, Tatibana M", "reference": { "type": "PubMed", "id": "2560337", "url": "https://pubmed.ncbi.nlm.nih.gov/2560337" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P11908-1", "protein_name": "Ribose-phosphate pyrophosphokinase 2", "gene_name": "PRPS2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P11908", "url": "https://www.uniprot.org/uniprotkb/P11908" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.2560337", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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Huang X, Feng Y, Zhang Y, Liu Y, Li S, Zhan Z, Zheng L, Feng H, Li Y", "reference": { "type": "PubMed", "id": "33493137", "url": "https://pubmed.ncbi.nlm.nih.gov/33493137" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P11908-1", "protein_name": "Ribose-phosphate pyrophosphokinase 2", "gene_name": "PRPS2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P11908", "url": "https://www.uniprot.org/uniprotkb/P11908" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.33493137", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "RAM function is dependent on Kapbeta2-mediated nuclear entry.", "journal": "The Biochemical journal", "date": "2014", "authors": "Gonatopoulos-Pournatzis T, Cowling VH", "reference": { "type": "PubMed", "id": "24200467", "url": "https://pubmed.ncbi.nlm.nih.gov/24200467" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BTL3-1", "protein_name": "RNA guanine-N7 methyltransferase activating subunit", "gene_name": "RAMAC", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BTL3", "url": "https://www.uniprot.org/uniprotkb/Q9BTL3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.24200467", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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Decreased interaction with RAMAC; when associated with E-409.", "evidence": [ { "database": "UniProtKB", "id": "O43148", "url": "https://www.uniprot.org/uniprotkb/O43148" }, { "database": "PubMed", "id": "27422871", "url": "https://pubmed.ncbi.nlm.nih.gov/27422871" } ], "uniprot_canonical_ac": "O43148-1" }, { "start_pos": 417, "end_pos": 417, "sequence_org": "A", "sequence_mut": "C", "comment": "Loss of methyltransferase activity in presence or absence of RAMAC; when associated with C-178. Complete restored RAMAC-mediated methyltransferase activity under reducing conditions; when associated with C-178. Loss of methyltransferase activity in presence or absence of RAMAC; when associated with C-178. Loss of methyltransferase activity in presence or absence of RAMAC; when associated with C-178; C-393 and C-398. Partially restored RAMAC-mediated methyltransferase activity under reducing conditions; when associated with C-178; C-393 and C-398.", "evidence": [ { "database": "UniProtKB", "id": "O43148", "url": "https://www.uniprot.org/uniprotkb/O43148" }, { "database": "PubMed", "id": "27422871", "url": "https://pubmed.ncbi.nlm.nih.gov/27422871" } ], "uniprot_canonical_ac": "O43148-1" }, { "start_pos": 450, "end_pos": 450, "sequence_org": "R", "sequence_mut": "E", "comment": "Increased S-adenosyl-L-methionine binding and methyltransferase activity in absence of RAMAC; when associated with E-452. No change in interaction with RAMAC; when associated with E-452.", "evidence": [ { "database": "UniProtKB", "id": "O43148", "url": "https://www.uniprot.org/uniprotkb/O43148" }, { "database": "PubMed", "id": "27422871", "url": "https://pubmed.ncbi.nlm.nih.gov/27422871" } ], "uniprot_canonical_ac": "O43148-1" }, { "start_pos": 452, "end_pos": 452, "sequence_org": "P", "sequence_mut": "E", "comment": "Increased S-adenosyl-L-methionine binding and methyltransferase activity in absence of RAMAC; when associated with E-450. 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J. Mol. 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[] } ] }, { "title": "Fine-structure map of the human ribosomal protein gene RPS14.", "journal": "Mol. 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"Primary structure of human ribosomal protein S14 and the gene that encodes it.", "journal": "Mol. Cell. Biol.", "date": "1986", "authors": "Rhoads DD, Dixit A, Roufa DJ", "reference": { "type": "PubMed", "id": "3785212", "url": "https://pubmed.ncbi.nlm.nih.gov/3785212" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P62263-1", "protein_name": "Small ribosomal subunit protein uS11", "gene_name": "RPS14", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P62263", "url": "https://www.uniprot.org/uniprotkb/P62263" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.3785212", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] } ]