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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mutations in the COL5A1 gene are causal in the Ehlers-Danlos syndromes I and II.", "journal": "American journal of human genetics", "date": "1997", "authors": "De Paepe A, Nuytinck L, Hausser I, Anton-Lamprecht I, Naeyaert JM", "reference": { "type": "PubMed", "id": "9042913", "url": "https://pubmed.ncbi.nlm.nih.gov/9042913" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P20908-1", "protein_name": "Collagen alpha-1(V) chain", "gene_name": "COL5A1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P20908", "url": "https://www.uniprot.org/uniprotkb/P20908" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9042913", "abstract": "", "glycosylation": [], "mutagenesis": 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"species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9ULV8", "url": "https://www.uniprot.org/uniprotkb/Q9ULV8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10362357", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular cloning and characterization of a novel cbl-family gene, cbl-c.", "journal": "Gene", "date": "1999", "authors": "Kim M, Tezuka T, Suziki Y, Sugano S, Hirai M, Yamamoto T", "reference": { "type": "PubMed", "id": "10571044", "url": "https://pubmed.ncbi.nlm.nih.gov/10571044" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9ULV8-1", "protein_name": "E3 ubiquitin-protein ligase CBL-C", "gene_name": "CBLC", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9ULV8", "url": "https://www.uniprot.org/uniprotkb/Q9ULV8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10571044", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ 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Decreases interaction with SRC and abolishes SRC ubiquitination.", "evidence": [ { "database": "UniProtKB", "id": "Q9ULV8", "url": "https://www.uniprot.org/uniprotkb/Q9ULV8" }, { "database": "PubMed", "id": "22888118", "url": "https://pubmed.ncbi.nlm.nih.gov/22888118" } ], "uniprot_canonical_ac": "Q9ULV8-1" }, { "start_pos": 265, "end_pos": 265, "sequence_org": "P", "sequence_mut": "L", "comment": "Enhances interaction with EGFR and SRC as well as SRC ubiquitination.", "evidence": [ { "database": "UniProtKB", "id": "Q9ULV8", "url": "https://www.uniprot.org/uniprotkb/Q9ULV8" }, { "database": "PubMed", "id": "22888118", "url": "https://pubmed.ncbi.nlm.nih.gov/22888118" } ], "uniprot_canonical_ac": "Q9ULV8-1" }, { "start_pos": 266, "end_pos": 266, "sequence_org": "S", "sequence_mut": "A", "comment": "Decreases interactions with EGFR and SRC as well as SRC ubiquitination.", "evidence": [ { "database": "UniProtKB", "id": "Q9ULV8", "url": "https://www.uniprot.org/uniprotkb/Q9ULV8" }, { "database": "PubMed", "id": "22888118", "url": "https://pubmed.ncbi.nlm.nih.gov/22888118" } ], "uniprot_canonical_ac": "Q9ULV8-1" }, { "start_pos": 268, "end_pos": 268, "sequence_org": "T", "sequence_mut": "A", "comment": "Abolishes interaction with EGFR. Decreases interaction with and ubiquitination of SRC.", "evidence": [ { "database": "UniProtKB", "id": "Q9ULV8", "url": "https://www.uniprot.org/uniprotkb/Q9ULV8" }, { "database": "PubMed", "id": "22888118", "url": "https://pubmed.ncbi.nlm.nih.gov/22888118" } ], "uniprot_canonical_ac": "Q9ULV8-1" }, { "start_pos": 276, "end_pos": 276, "sequence_org": "G", "sequence_mut": "E", "comment": "No effect on interaction with RET. Binds slightly to SRC, this interaction is independent of SRC phosphorylation. Strongly decreases SRC ubiquitination. Abolishes interaction with EGFR.", "evidence": [ { "database": "UniProtKB", "id": "Q9ULV8", "url": "https://www.uniprot.org/uniprotkb/Q9ULV8" }, { "database": "PubMed", "id": "22888118", "url": "https://pubmed.ncbi.nlm.nih.gov/22888118" }, { "database": "PubMed", "id": "14661060", "url": "https://pubmed.ncbi.nlm.nih.gov/14661060" }, { "database": "PubMed", "id": "18753381", "url": "https://pubmed.ncbi.nlm.nih.gov/18753381" } ], "uniprot_canonical_ac": "Q9ULV8-1" }, { "start_pos": 1067, "end_pos": 1067, "sequence_org": "Q", "sequence_mut": "G", "comment": "No effect on interaction with CBLC.", "evidence": [ { "database": "UniProtKB", "id": "P00533", "url": "https://www.uniprot.org/uniprotkb/P00533" }, { "database": "PubMed", "id": "22888118", "url": "https://pubmed.ncbi.nlm.nih.gov/22888118" } ], "uniprot_canonical_ac": "P00533-1" }, { "start_pos": 1068, "end_pos": 1068, "sequence_org": "R", "sequence_mut": "G", "comment": "Strongly decreases interaction with CBLC.", "evidence": [ { "database": "UniProtKB", "id": "P00533", "url": "https://www.uniprot.org/uniprotkb/P00533" }, { "database": "PubMed", "id": "22888118", "url": "https://pubmed.ncbi.nlm.nih.gov/22888118" } ], "uniprot_canonical_ac": "P00533-1" }, { "start_pos": 1069, "end_pos": 1069, "sequence_org": "Y", "sequence_mut": "F", "comment": "Abolishes interaction with CBLC.", "evidence": [ { "database": "UniProtKB", "id": "P00533", "url": "https://www.uniprot.org/uniprotkb/P00533" }, { "database": "PubMed", "id": "22888118", "url": "https://pubmed.ncbi.nlm.nih.gov/22888118" } ], "uniprot_canonical_ac": "P00533-1" } ], "phosphorylation": [ { "start_pos": 1069, "end_pos": 1069, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine", "evidence": [ { "database": "UniProtKB", "id": "P00533", "url": "https://www.uniprot.org/uniprotkb/P00533" }, { "database": "PubMed", "id": "23774213", "url": "https://pubmed.ncbi.nlm.nih.gov/23774213" }, { "database": "PubMed", "id": "22888118", "url": "https://pubmed.ncbi.nlm.nih.gov/22888118" }, { "database": "iPTMnet", "id": "P00533", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P00533" }, { "database": "PubMed", "id": "10635327", "url": "https://pubmed.ncbi.nlm.nih.gov/10635327" }, { "database": "PubMed", "id": "16799092", "url": "https://pubmed.ncbi.nlm.nih.gov/16799092" }, { "database": "PubMed", "id": "17016520", "url": "https://pubmed.ncbi.nlm.nih.gov/17016520" }, { "database": "PubMed", "id": "17389395", "url": "https://pubmed.ncbi.nlm.nih.gov/17389395" }, { "database": "PubMed", "id": "18669648", "url": "https://pubmed.ncbi.nlm.nih.gov/18669648" }, { "database": "PubMed", "id": "18691976", "url": "https://pubmed.ncbi.nlm.nih.gov/18691976" }, { "database": "PubMed", "id": "9363897", "url": "https://pubmed.ncbi.nlm.nih.gov/9363897" }, { "database": "IntAct", "id": "P00533", "url": "https://www.ebi.ac.uk/intact/interactors/id:P00533*" }, { "database": "PubMed", "id": "16729043", "url": "https://pubmed.ncbi.nlm.nih.gov/16729043" }, { "database": "PRO", "id": "P00533", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=P00533" }, { "database": "PubMed", "id": "19531499", "url": "https://pubmed.ncbi.nlm.nih.gov/19531499" }, { "database": "PubMed", "id": "31460159", "url": "https://pubmed.ncbi.nlm.nih.gov/31460159" } ], "site_lbl": "Tyr1069", "uniprot_canonical_ac": "P00533-1" } ], "record_id": "pubmed.22888118", "abstract": "", "glycosylation": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cbl-c ubiquitin ligase activity is increased via the interaction of its RING finger domain with a LIM domain of the paxillin homolog, Hic 5.", "journal": "PloS one", "date": "2012", "authors": "Ryan PE, Kales SC, Yadavalli R, Nau MM, Zhang H, Lipkowitz S", "reference": { "type": "PubMed", "id": "23145173", "url": "https://pubmed.ncbi.nlm.nih.gov/23145173" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9ULV8-1", "protein_name": "E3 ubiquitin-protein ligase CBL-C", "gene_name": "CBLC", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43294-1", "protein_name": "Transforming growth factor beta-1-induced transcript 1 protein", "gene_name": "TGFB1I1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9ULV8", "url": "https://www.uniprot.org/uniprotkb/Q9ULV8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 341, "end_pos": 341, "sequence_org": "Y", "sequence_mut": "E", "comment": "Induces E3 activity and autoubiquitination. Releases ubiquitin-conjugating enzyme E2 UBE2D2 faster.", "evidence": [ { "database": "UniProtKB", "id": "Q9ULV8", "url": "https://www.uniprot.org/uniprotkb/Q9ULV8" }, { "database": "PubMed", "id": "23145173", "url": "https://pubmed.ncbi.nlm.nih.gov/23145173" }, { "database": "PubMed", "id": "14661060", "url": "https://pubmed.ncbi.nlm.nih.gov/14661060" }, { "database": "PubMed", "id": "20525694", "url": "https://pubmed.ncbi.nlm.nih.gov/20525694" } ], "uniprot_canonical_ac": "Q9ULV8-1" }, { "start_pos": 341, "end_pos": 341, "sequence_org": "Y", "sequence_mut": "F", "comment": "Abolishes activation by EGF stimulation and enhancement by TGFB1I1 of E3 activity.", "evidence": [ { "database": "UniProtKB", "id": "Q9ULV8", "url": "https://www.uniprot.org/uniprotkb/Q9ULV8" }, { "database": "PubMed", "id": "23145173", "url": "https://pubmed.ncbi.nlm.nih.gov/23145173" }, { "database": "PubMed", "id": "14661060", "url": "https://pubmed.ncbi.nlm.nih.gov/14661060" }, { "database": "PubMed", "id": "20525694", "url": "https://pubmed.ncbi.nlm.nih.gov/20525694" } ], "uniprot_canonical_ac": "Q9ULV8-1" }, { "start_pos": 341, "end_pos": 341, "sequence_org": "Y", "sequence_mut": "", "comment": "Abolishes E3 activity.", "evidence": [ { "database": "UniProtKB", "id": "Q9ULV8", "url": "https://www.uniprot.org/uniprotkb/Q9ULV8" }, { "database": "PubMed", "id": "23145173", "url": "https://pubmed.ncbi.nlm.nih.gov/23145173" }, { "database": "PubMed", "id": "14661060", "url": "https://pubmed.ncbi.nlm.nih.gov/14661060" }, { "database": "PubMed", "id": "20525694", "url": "https://pubmed.ncbi.nlm.nih.gov/20525694" } ], "uniprot_canonical_ac": "Q9ULV8-1" }, { "start_pos": 351, "end_pos": 351, "sequence_org": "C", "sequence_mut": "A", "comment": "No effect on TGFB1I1 and SRC interactions. Abolishes SRC ubiquitination. Abolishes interaction with TGFB1I1; when associated with A-366. Abolishes interaction with RET and inhibition of RET degradation.", "evidence": [ { "database": "UniProtKB", "id": "Q9ULV8", "url": "https://www.uniprot.org/uniprotkb/Q9ULV8" }, { "database": "PubMed", "id": "23145173", "url": "https://pubmed.ncbi.nlm.nih.gov/23145173" }, { "database": "PubMed", "id": "14661060", "url": "https://pubmed.ncbi.nlm.nih.gov/14661060" }, { "database": "PubMed", "id": "18753381", "url": "https://pubmed.ncbi.nlm.nih.gov/18753381" } ], "uniprot_canonical_ac": "Q9ULV8-1" }, { "start_pos": 366, "end_pos": 366, "sequence_org": "C", "sequence_mut": "A", "comment": "Abolishes interaction with TGFB1I1. Abolishes interaction with TGFB1I1; when associated with A-351.", "evidence": [ { "database": "UniProtKB", "id": "Q9ULV8", "url": "https://www.uniprot.org/uniprotkb/Q9ULV8" }, { "database": "PubMed", "id": "23145173", "url": "https://pubmed.ncbi.nlm.nih.gov/23145173" } ], "uniprot_canonical_ac": "Q9ULV8-1" }, { "start_pos": 287, "end_pos": 287, "sequence_org": "C", "sequence_mut": "A", "comment": "Abolishes interaction with CBLC and enhancement of CBLCE3 ubiquitin-protein ligase activity.", "evidence": [ { "database": "UniProtKB", "id": "O43294", "url": "https://www.uniprot.org/uniprotkb/O43294" }, { "database": "PubMed", "id": "23145173", "url": "https://pubmed.ncbi.nlm.nih.gov/23145173" } ], "uniprot_canonical_ac": "O43294-1" }, { "start_pos": 313, "end_pos": 313, "sequence_org": "C", "sequence_mut": "A", "comment": "No effect on interaction with CBLC.", "evidence": [ { "database": "UniProtKB", "id": "O43294", "url": "https://www.uniprot.org/uniprotkb/O43294" }, { "database": 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"n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Stabilization of AURKA by the E3 ubiquitin ligase CBLC in lung adenocarcinoma.", "journal": "Oncogene", "date": "2022", "authors": "Hong SY, Lu YC, Hsiao SH, Kao YR, Lee MH, Lin YP, Wang CY, Wu CW", "reference": { "type": "PubMed", "id": "35149839", "url": "https://pubmed.ncbi.nlm.nih.gov/35149839" }, "referenced_glycans": [], 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Gastroenterol.", "date": "2004", "authors": "Yang Lian-Yue, Wang Wei, Peng Ji-Xiang, Yang Jie-Quan, Huang Gen-Wen", "reference": { "type": "PubMed", "id": "15534908", "url": "https://pubmed.ncbi.nlm.nih.gov/15534908" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYE9-1", "protein_name": "Cadherin-related family member 2", "gene_name": "CDHR2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYE9", "url": "https://www.uniprot.org/uniprotkb/Q9BYE9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15534908", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] 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Biol.", "date": "1997", "authors": "Ye H, Kelly TF, Samadani U, Lim L, Rubio S, Overdier DG, Roebuck KA, Costa RH", "reference": { "type": "PubMed", "id": "9032290", "url": "https://pubmed.ncbi.nlm.nih.gov/9032290" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q08050-1", "protein_name": "Forkhead box protein M1", "gene_name": "FOXM1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q08050", "url": "https://www.uniprot.org/uniprotkb/Q08050" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9032290", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular analysis of a novel winged helix protein, WIN. 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Chem.", "date": "1997", "authors": "Yao KM, Sha M, Lu Z, Wong GG", "reference": { "type": "PubMed", "id": "9242644", "url": "https://pubmed.ncbi.nlm.nih.gov/9242644" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q08050-1", "protein_name": "Forkhead box protein M1", "gene_name": "FOXM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P97691-1", "protein_name": "Forkhead box protein M1", "gene_name": "Foxm1", "tax_name": "Rat" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q08050", "url": "https://www.uniprot.org/uniprotkb/Q08050" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9242644", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structure and mechanism of the human CTDNEP1-NEP1R1 membrane protein phosphatase complex necessary to maintain ER membrane morphology.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2024-05-28", "authors": "Gao Shujuan, Carrasquillo Rodr\u00edguez Jake W, Bahmanyar Shirin, Airola Michael V", "reference": { "type": "PubMed", "id": "38776370", "url": "https://pubmed.ncbi.nlm.nih.gov/38776370" }, "referenced_glycans": [], "referenced_proteins": [ { 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Genet.", "date": "1998", "authors": "Sato M, Mori Y, Sakurada A, Fujimura S, Horii A", "reference": { "type": "PubMed", "id": "9737784", "url": "https://pubmed.ncbi.nlm.nih.gov/9737784" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P55290-1", "protein_name": "Cadherin-13", "gene_name": "CDH13", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P55290", "url": "https://www.uniprot.org/uniprotkb/P55290" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9737784", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular cloning and characterization of dullard: a novel gene required for neural development.", "journal": "Biochem. Biophys. Res. Commun.", "date": "2002", "authors": "Satow R, Chan TC, Asashima M", "reference": { "type": "PubMed", "id": "12083771", "url": "https://pubmed.ncbi.nlm.nih.gov/12083771" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O95476-1", "protein_name": "CTD nuclear envelope phosphatase 1", "gene_name": "CTDNEP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3TP92-1", "protein_name": "CTD nuclear envelope phosphatase 1", "gene_name": "Ctdnep1", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O95476", "url": "https://www.uniprot.org/uniprotkb/O95476" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12083771", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", 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Genet.", "date": "2004", "authors": "Fernandez T, Morgan T, Davis N, Klin A, Morris A, Farhi A, Lifton RP, State MW", "reference": { "type": "PubMed", "id": "15106122", "url": "https://pubmed.ncbi.nlm.nih.gov/15106122" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8IWV2-1", "protein_name": "Contactin-4", "gene_name": "CNTN4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8IWV2", "url": "https://www.uniprot.org/uniprotkb/Q8IWV2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15106122", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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Immunol.", "date": "1992", "authors": "Anderson MJ, Milner CM, Cotton RG, Campbell RD", "reference": { "type": "PubMed", "id": "1573268", "url": "https://pubmed.ncbi.nlm.nih.gov/1573268" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P0C0L4-1", "protein_name": "Complement C4-A", "gene_name": "C4A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P0C0L4", "url": "https://www.uniprot.org/uniprotkb/P0C0L4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.1573268", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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DNA sequences, polymorphism, and linkage to the 21-hydroxylase gene.", "journal": "Journal of immunology (Baltimore, Md. : 1950)", "date": "1991", "authors": "Yu CY", "reference": { "type": "PubMed", "id": "1988494", "url": "https://pubmed.ncbi.nlm.nih.gov/1988494" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P0C0L4-1", "protein_name": "Complement C4-A", "gene_name": "C4A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P0C0L4", "url": "https://www.uniprot.org/uniprotkb/P0C0L4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.1988494", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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