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The use of X-ray crystal structure data in the optimization of P3 and P4 substituents.", "journal": "Org. Lett.", "date": "2002", "authors": "Andrews David M, Chaignot Helene, Coomber Barry A, Good Andrew C, Hind S Lucy, Johnson Martin R, Jones Paul S, Mills Gail, Robinson J Ed, Skarzynski Tadeusz, Slater Martin J, Somers Donald O'N", "reference": { "type": "PubMed", "id": "12465917", "url": "https://pubmed.ncbi.nlm.nih.gov/12465917" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P27958-1", "protein_name": "Genome polyprotein", "gene_name": "", "tax_name": "HCV" } ], "species": [ { "name": "Hepatitis C virus (isolate H77)", "taxid": 63746, "evidence": [ { "database": "UniProtKB", "id": "P27958", "url": "https://www.uniprot.org/uniprotkb/P27958" } ], "common_name": "HCV", "glygen_name": "HCV-H77", "reference_species": "Hepatitis C virus (isolate H77) [63746]" } ], "record_id": "pubmed.12465917", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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Virol.", "date": "2003", "authors": "Dimitrova Maria, Imbert Isabelle, Kieny Marie Paule, Schuster Catherine", "reference": { "type": "PubMed", "id": "12692242", "url": "https://pubmed.ncbi.nlm.nih.gov/12692242" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P27958-1", "protein_name": "Genome polyprotein", "gene_name": "", "tax_name": "HCV" } ], "species": [ { "name": "Hepatitis C virus (isolate H77)", "taxid": 63746, "evidence": [ { "database": "UniProtKB", "id": "P27958", "url": "https://www.uniprot.org/uniprotkb/P27958" } ], "common_name": "HCV", "glygen_name": "HCV-H77", "reference_species": "Hepatitis C virus (isolate H77) [63746]" } ], "record_id": "pubmed.12692242", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Topology of the membrane-associated hepatitis C virus protein NS4B.", "journal": "J. Virol.", "date": "2003", "authors": "Lundin Marika, Monn\u00e9 Magnus, Widell Anders, Von Heijne Gunnar, Persson Mats A A", "reference": { "type": "PubMed", "id": "12692244", "url": "https://pubmed.ncbi.nlm.nih.gov/12692244" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P27958-1", "protein_name": "Genome polyprotein", "gene_name": "", "tax_name": "HCV" } ], "species": [ { "name": "Hepatitis C virus (isolate H77)", "taxid": 63746, "evidence": [ { "database": "UniProtKB", "id": "P27958", "url": "https://www.uniprot.org/uniprotkb/P27958" } ], "common_name": "HCV", "glygen_name": "HCV-H77", "reference_species": "Hepatitis C virus (isolate H77) [63746]" } ], "record_id": "pubmed.12692244", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of the hepatitis C virus RNA replication complex in Huh-7 cells harboring subgenomic replicons.", "journal": "J. Virol.", "date": "2003", "authors": "Gosert Rainer, Egger Denise, Lohmann Volker, Bartenschlager Ralf, Blum Hubert E, Bienz Kurt, Moradpour Darius", "reference": { "type": "PubMed", "id": "12692249", "url": "https://pubmed.ncbi.nlm.nih.gov/12692249" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P27958-1", "protein_name": "Genome polyprotein", "gene_name": "", "tax_name": "HCV" } ], "species": [ { "name": "Hepatitis C virus (isolate H77)", "taxid": 63746, "evidence": [ { "database": "UniProtKB", "id": "P27958", "url": "https://www.uniprot.org/uniprotkb/P27958" } ], "common_name": "HCV", "glygen_name": "HCV-H77", "reference_species": "Hepatitis C virus (isolate H77) [63746]" } ], "record_id": "pubmed.12692249", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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critical for infectivity and contains functionally important genotype-specific sequences.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2003", "authors": "Sakai A, Claire MS, Faulk K, Govindarajan S, Emerson SU, Purcell RH, Bukh J", "reference": { "type": "PubMed", "id": "14504405", "url": "https://pubmed.ncbi.nlm.nih.gov/14504405" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P27958-1", "protein_name": "Genome polyprotein", "gene_name": "", "tax_name": "HCV" } ], "species": [ { "name": "Hepatitis C virus (isolate H77)", "taxid": 63746, "evidence": [ { "database": "UniProtKB", "id": "P27958", "url": "https://www.uniprot.org/uniprotkb/P27958" } ], "common_name": "HCV", "glygen_name": "HCV-H77", "reference_species": "Hepatitis C virus (isolate H77) [63746]" } ], "mutagenesis": [ { "start_pos": 779, "end_pos": 779, "sequence_org": "K", "sequence_mut": "I", "comment": "Virus can no longer infect 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"Cation-selective ion channels formed by p7 of hepatitis C virus are blocked by hexamethylene amiloride.", "journal": "FEBS letters", "date": "2004-01-16", "authors": "Premkumar A, Wilson L, Ewart G D, Gage P W", "reference": { "type": "PubMed", "id": "14741348", "url": "https://pubmed.ncbi.nlm.nih.gov/14741348" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P27958-1", "protein_name": "Genome polyprotein", "gene_name": "", "tax_name": "HCV" } ], "species": [ { "name": "Hepatitis C virus (isolate H77)", "taxid": 63746, "evidence": [ { "database": "UniProtKB", "id": "P27958", "url": "https://www.uniprot.org/uniprotkb/P27958" } ], "common_name": "HCV", "glygen_name": "HCV-H77", "reference_species": "Hepatitis C virus (isolate H77) [63746]" } ], "record_id": "pubmed.14741348", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { 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virus envelope glycoproteins.", "journal": "Journal of virology", "date": "2004", "authors": "Op De Beeck A, Voisset C, Bartosch B, Ciczora Y, Cocquerel L, Keck Z, Foung S, Cosset FL, Dubuisson J", "reference": { "type": "PubMed", "id": "14990718", "url": "https://pubmed.ncbi.nlm.nih.gov/14990718" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P27958-1", "protein_name": "Genome polyprotein", "gene_name": "", "tax_name": "HCV" } ], "species": [ { "name": "Hepatitis C virus (isolate H77)", "taxid": 63746, "evidence": [ { "database": "UniProtKB", "id": "P27958", "url": "https://www.uniprot.org/uniprotkb/P27958" } ], "common_name": "HCV", "glygen_name": "HCV-H77", "reference_species": "Hepatitis C virus (isolate H77) [63746]" } ], "record_id": "pubmed.14990718", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": 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Chem.", "date": "2004", "authors": "Penin Fran\u00e7ois, Brass Volker, Appel Nicole, Ramboarina Stephanie, Montserret Roland, Ficheux Damien, Blum Hubert E, Bartenschlager Ralf, Moradpour Darius", "reference": { "type": "PubMed", "id": "15247283", "url": "https://pubmed.ncbi.nlm.nih.gov/15247283" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P27958-1", "protein_name": "Genome polyprotein", "gene_name": "", "tax_name": "HCV" } ], "species": [ { "name": "Hepatitis C virus (isolate H77)", "taxid": 63746, "evidence": [ { "database": "UniProtKB", "id": "P27958", "url": "https://www.uniprot.org/uniprotkb/P27958" } ], "common_name": "HCV", "glygen_name": "HCV-H77", "reference_species": "Hepatitis C virus (isolate H77) [63746]" } ], "record_id": "pubmed.15247283", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": 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Lucas Michaela, Timm Joerg, Ouchi Kei, Kim Arthur Y, Day Cheryl L, Robbins Gregory K, Casson Deborah R, Reiser Markus, Dusheiko Geoffrey, Allen Todd M, Chung Raymond T, Walker Bruce D, Klenerman Paul", "reference": { "type": "PubMed", "id": "15362047", "url": "https://pubmed.ncbi.nlm.nih.gov/15362047" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P27958-1", "protein_name": "Genome polyprotein", "gene_name": "", "tax_name": "HCV" } ], "species": [ { "name": "Hepatitis C virus (isolate H77)", "taxid": 63746, "evidence": [ { "database": "UniProtKB", "id": "P27958", "url": "https://www.uniprot.org/uniprotkb/P27958" } ], "common_name": "HCV", "glygen_name": "HCV-H77", "reference_species": "Hepatitis C virus (isolate H77) [63746]" } ], "record_id": "pubmed.15362047", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": 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the domain 2 of hepatitis C virus non-structural protein 5A.", "journal": "Molecules and cells", "date": "2006-08-31", "authors": "Liang Yu, Kang Cong Bao, Yoon Ho Sup", "reference": { "type": "PubMed", "id": "16951545", "url": "https://pubmed.ncbi.nlm.nih.gov/16951545" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P27958-1", "protein_name": "Genome polyprotein", "gene_name": "", "tax_name": "HCV" }, { "uniprot_canonical_ac": "P19525-1", "protein_name": "Interferon-induced, double-stranded RNA-activated protein kinase", "gene_name": "EIF2AK2", "tax_name": "Human" } ], "species": [ { "name": "Hepatitis C virus (isolate H77)", "taxid": 63746, "evidence": [ { "database": "UniProtKB", "id": "P27958", "url": "https://www.uniprot.org/uniprotkb/P27958" } ], "common_name": "HCV", "glygen_name": "HCV-H77", "reference_species": "Hepatitis C virus (isolate H77) [63746]" } ], "record_id": "pubmed.16951545", "abstract": "", "glycosylation": [], "mutagenesis": [], 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Virol.", "date": "2006", "authors": "Lundin Marika, Lindstr\u00f6m Hannah, Gr\u00f6nwall Caroline, Persson Mats A A", "reference": { "type": "PubMed", "id": "17030859", "url": "https://pubmed.ncbi.nlm.nih.gov/17030859" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P27958-1", "protein_name": "Genome polyprotein", "gene_name": "", "tax_name": "HCV" } ], "species": [ { "name": "Hepatitis C virus (isolate H77)", "taxid": 63746, "evidence": [ { "database": "UniProtKB", "id": "P27958", "url": "https://www.uniprot.org/uniprotkb/P27958" } ], "common_name": "HCV", "glygen_name": "HCV-H77", "reference_species": "Hepatitis C virus (isolate H77) [63746]" } ], "record_id": "pubmed.17030859", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Conserved determinants for membrane association of nonstructural protein 5A from hepatitis C virus and related viruses.", "journal": "J. Virol.", "date": "2007", "authors": "Brass Volker, Pal Zsuzsanna, Sapay Nicolas, Del\u00e9age Gilbert, Blum Hubert E, Penin Fran\u00e7ois, Moradpour Darius", "reference": { "type": "PubMed", "id": "17192310", "url": "https://pubmed.ncbi.nlm.nih.gov/17192310" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P27958-1", "protein_name": "Genome polyprotein", "gene_name": "", "tax_name": "HCV" } ], "species": [ { "name": "Hepatitis C virus (isolate H77)", "taxid": 63746, "evidence": [ { "database": "UniProtKB", "id": "P27958", "url": "https://www.uniprot.org/uniprotkb/P27958" } ], "common_name": "HCV", "glygen_name": "HCV-H77", "reference_species": "Hepatitis C virus (isolate H77) [63746]" } ], "record_id": "pubmed.17192310", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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Commun.", "date": "2009", "authors": "Duvignaud Jean-Baptiste, Savard Christian, Fromentin R\u00e9mi, Majeau Nathalie, Leclerc Denis, Gagn\u00e9 St\u00e9phane M", "reference": { "type": "PubMed", "id": "18992225", "url": "https://pubmed.ncbi.nlm.nih.gov/18992225" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P27958-1", "protein_name": "Genome polyprotein", "gene_name": "", "tax_name": "HCV" } ], "species": [ { "name": "Hepatitis C virus (isolate H77)", "taxid": 63746, "evidence": [ { "database": "UniProtKB", "id": "P27958", "url": "https://www.uniprot.org/uniprotkb/P27958" } ], "common_name": "HCV", "glygen_name": "HCV-H77", "reference_species": "Hepatitis C virus (isolate H77) [63746]" } ], "record_id": "pubmed.18992225", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of a novel determinant for membrane association in hepatitis C virus nonstructural protein 4B.", "journal": "J. Virol.", "date": "2009", "authors": "Gouttenoire J\u00e9r\u00f4me, Castet Val\u00e9rie, Montserret Roland, Arora Naveen, Raussens Vincent, Ruysschaert Jean-Marie, Diesis Eric, Blum Hubert E, Penin Fran\u00e7ois, Moradpour Darius", "reference": { "type": "PubMed", "id": "19357161", "url": "https://pubmed.ncbi.nlm.nih.gov/19357161" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P27958-1", "protein_name": "Genome polyprotein", "gene_name": "", "tax_name": "HCV" } ], "species": [ { "name": "Hepatitis C virus (isolate H77)", "taxid": 63746, "evidence": [ { "database": "UniProtKB", "id": "P27958", "url": "https://www.uniprot.org/uniprotkb/P27958" } ], "common_name": "HCV", "glygen_name": "HCV-H77", "reference_species": "Hepatitis C virus (isolate H77) [63746]" } ], "record_id": "pubmed.19357161", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of a novel protein binding to hepatitis C virus core protein.", "journal": "J. 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Hepatol.", "date": "2009", "authors": "Chen YR, Chen TY, Zhang SL, Lin SM, Zhao YR, Ye F, Zhang X, Shi L, Dang SS, Liu M", "reference": { "type": "PubMed", "id": "19486448", "url": "https://pubmed.ncbi.nlm.nih.gov/19486448" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P27958-1", "protein_name": "Genome polyprotein", "gene_name": "", "tax_name": "HCV" }, { "uniprot_canonical_ac": "Q96HD9-1", "protein_name": "N-acyl-aromatic-L-amino acid amidohydrolase (carboxylate-forming)", "gene_name": "ACY3", "tax_name": "Human" } ], "species": [ { "name": "Hepatitis C virus (isolate H77)", "taxid": 63746, "evidence": [ { "database": "UniProtKB", "id": "P27958", "url": "https://www.uniprot.org/uniprotkb/P27958" } ], "common_name": "HCV", "glygen_name": "HCV-H77", "reference_species": "Hepatitis C virus (isolate H77) [63746]" } ], "record_id": "pubmed.19486448", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "An amphipathic alpha-helix at the C terminus of hepatitis C virus nonstructural protein 4B mediates membrane association.", "journal": "J. Virol.", "date": "2009", "authors": "Gouttenoire J\u00e9r\u00f4me, Montserret Roland, Kennel Audrey, Penin Fran\u00e7ois, Moradpour Darius", "reference": { "type": "PubMed", "id": "19692468", "url": "https://pubmed.ncbi.nlm.nih.gov/19692468" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P27958-1", "protein_name": "Genome polyprotein", "gene_name": "", "tax_name": "HCV" } ], "species": [ { "name": "Hepatitis C virus (isolate H77)", "taxid": 63746, "evidence": [ { "database": "UniProtKB", "id": "P27958", "url": "https://www.uniprot.org/uniprotkb/P27958" } ], "common_name": "HCV", "glygen_name": "HCV-H77", "reference_species": "Hepatitis C virus (isolate H77) [63746]" } ], "record_id": "pubmed.19692468", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"Hepatitis C virus induces epidermal growth factor receptor activation via CD81 binding for viral internalization and entry.", "journal": "Journal of virology", "date": "2012-10", "authors": "Diao Jingyu, Pantua Homer, Ngu Hai, Komuves Laszlo, Diehl Lauri, Schaefer Gabriele, Kapadia Sharookh B", "reference": { "type": "PubMed", "id": "22855500", "url": "https://pubmed.ncbi.nlm.nih.gov/22855500" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P27958-1", "protein_name": "Genome polyprotein", "gene_name": "", "tax_name": "HCV" } ], "species": [ { "name": "Hepatitis C virus (isolate H77)", "taxid": 63746, "evidence": [ { "database": "UniProtKB", "id": "P27958", "url": "https://www.uniprot.org/uniprotkb/P27958" } ], "common_name": "HCV", "glygen_name": "HCV-H77", "reference_species": "Hepatitis C virus (isolate H77) [63746]" } ], "record_id": "pubmed.22855500", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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Yongzhe, Peng Haoran, Aurelian Laure, Zhao Ping, Qi Zhongtian", "reference": { "type": "PubMed", "id": "22927442", "url": "https://pubmed.ncbi.nlm.nih.gov/22927442" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P27958-1", "protein_name": "Genome polyprotein", "gene_name": "", "tax_name": "HCV" } ], "species": [ { "name": "Hepatitis C virus (isolate H77)", "taxid": 63746, "evidence": [ { "database": "UniProtKB", "id": "P27958", "url": "https://www.uniprot.org/uniprotkb/P27958" } ], "common_name": "HCV", "glygen_name": "HCV-H77", "reference_species": "Hepatitis C virus (isolate H77) [63746]" } ], "record_id": "pubmed.22927442", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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Taekyu, Lee Choongho", "reference": { "type": "PubMed", "id": "23868571", "url": "https://pubmed.ncbi.nlm.nih.gov/23868571" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P27958-1", "protein_name": "Genome polyprotein", "gene_name": "", "tax_name": "HCV" } ], "species": [ { "name": "Hepatitis C virus (isolate H77)", "taxid": 63746, "evidence": [ { "database": "UniProtKB", "id": "P27958", "url": "https://www.uniprot.org/uniprotkb/P27958" } ], "common_name": "HCV", "glygen_name": "HCV-H77", "reference_species": "Hepatitis C virus (isolate H77) [63746]" } ], "record_id": "pubmed.23868571", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": 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}, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cell-death-inducing DFFA-like Effector B Contributes to the Assembly of Hepatitis C Virus (HCV) Particles and Interacts with HCV NS5A.", "journal": "Sci. Rep.", "date": "2016", "authors": "Cai H, Yao W, Li L, Li X, Hu L, Mai R, Peng T", "reference": { "type": "PubMed", "id": "27282740", "url": "https://pubmed.ncbi.nlm.nih.gov/27282740" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P27958-1", "protein_name": "Genome polyprotein", "gene_name": "", "tax_name": "HCV" }, { "uniprot_canonical_ac": "Q9UHD4-1", "protein_name": "Lipid transferase CIDEB", "gene_name": "CIDEB", "tax_name": "Human" } ], "species": [ { "name": "Hepatitis C virus (isolate H77)", "taxid": 63746, "evidence": [ { "database": "UniProtKB", "id": "P27958", "url": "https://www.uniprot.org/uniprotkb/P27958" } ], "common_name": "HCV", "glygen_name": "HCV-H77", "reference_species": "Hepatitis C virus (isolate H77) [63746]" } ], "record_id": "pubmed.27282740", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { 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Dis.", "date": "2016", "authors": "Ngure Marianne, Issur Moheshwarnath, Shkriabai Nikoloz, Liu Hsiao-Wei, Cosa Gonzalo, Kvaratskhelia Mamuka, G\u00f6tte Matthias", "reference": { "type": "PubMed", "id": "27676132", "url": "https://pubmed.ncbi.nlm.nih.gov/27676132" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P27958-1", "protein_name": "Genome polyprotein", "gene_name": "", "tax_name": "HCV" } ], "species": [ { "name": "Hepatitis C virus (isolate H77)", "taxid": 63746, "evidence": [ { "database": "UniProtKB", "id": "P27958", "url": "https://www.uniprot.org/uniprotkb/P27958" } ], "common_name": "HCV", "glygen_name": "HCV-H77", "reference_species": "Hepatitis C virus (isolate H77) [63746]" } ], "record_id": "pubmed.27676132", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": 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virus polyprotein cleavage products.", "journal": "Journal of virology", "date": "1993", "authors": "Grakoui A, Wychowski C, Lin C, Feinstone SM, Rice CM", "reference": { "type": "PubMed", "id": "7679746", "url": "https://pubmed.ncbi.nlm.nih.gov/7679746" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P27958-1", "protein_name": "Genome polyprotein", "gene_name": "", "tax_name": "HCV" } ], "species": [ { "name": "Hepatitis C virus (isolate H77)", "taxid": 63746, "evidence": [ { "database": "UniProtKB", "id": "P27958", "url": "https://www.uniprot.org/uniprotkb/P27958" } ], "common_name": "HCV", "glygen_name": "HCV-H77", "reference_species": "Hepatitis C virus (isolate H77) [63746]" } ], "record_id": "pubmed.7679746", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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Virol.", "date": "1995", "authors": "Lin C, Thomson J A, Rice C M", "reference": { "type": "PubMed", "id": "7769699", "url": "https://pubmed.ncbi.nlm.nih.gov/7769699" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P27958-1", "protein_name": "Genome polyprotein", "gene_name": "", "tax_name": "HCV" } ], "species": [ { "name": "Hepatitis C virus (isolate H77)", "taxid": 63746, "evidence": [ { "database": "UniProtKB", "id": "P27958", "url": "https://www.uniprot.org/uniprotkb/P27958" } ], "common_name": "HCV", "glygen_name": "HCV-H77", "reference_species": "Hepatitis C virus (isolate H77) [63746]" } ], "record_id": "pubmed.7769699", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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U.S.A.", "date": "1997", "authors": "Barba G, Harper F, Harada T, Kohara M, Goulinet S, Matsuura Y, Eder G, Schaff Z, Chapman M J, Miyamura T, Br\u00e9chot C", "reference": { "type": "PubMed", "id": "9037030", "url": "https://pubmed.ncbi.nlm.nih.gov/9037030" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P27958-1", "protein_name": "Genome polyprotein", "gene_name": "", "tax_name": "HCV" } ], "species": [ { "name": "Hepatitis C virus (isolate H77)", "taxid": 63746, "evidence": [ { "database": "UniProtKB", "id": "P27958", "url": "https://www.uniprot.org/uniprotkb/P27958" } ], "common_name": "HCV", "glygen_name": "HCV-H77", "reference_species": "Hepatitis C virus (isolate H77) [63746]" } ], "record_id": "pubmed.9037030", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structure of the hepatitis C virus RNA helicase domain.", "journal": "Nat. 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Biol.", "date": "1997", "authors": "Yao N, Hesson T, Cable M, Hong Z, Kwong A D, Le H V, Weber P C", "reference": { "type": "PubMed", "id": "9187654", "url": "https://pubmed.ncbi.nlm.nih.gov/9187654" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P27958-1", "protein_name": "Genome polyprotein", "gene_name": "", "tax_name": "HCV" } ], "species": [ { "name": "Hepatitis C virus (isolate H77)", "taxid": 63746, "evidence": [ { "database": "UniProtKB", "id": "P27958", "url": "https://www.uniprot.org/uniprotkb/P27958" } ], "common_name": "HCV", "glygen_name": "HCV-H77", "reference_species": "Hepatitis C virus (isolate H77) [63746]" } ], "record_id": "pubmed.9187654", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" 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U.S.A.", "date": "1997", "authors": "Yanagi M, Purcell RH, Emerson SU, Bukh J", "reference": { "type": "PubMed", "id": "9238047", "url": "https://pubmed.ncbi.nlm.nih.gov/9238047" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P27958-1", "protein_name": "Genome polyprotein", "gene_name": "", "tax_name": "HCV" } ], "species": [ { "name": "Hepatitis C virus (isolate H77)", "taxid": 63746, "evidence": [ { "database": "UniProtKB", "id": "P27958", "url": "https://www.uniprot.org/uniprotkb/P27958" } ], "common_name": "HCV", "glygen_name": "HCV-H77", "reference_species": "Hepatitis C virus (isolate H77) [63746]" } ], "record_id": "pubmed.9238047", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] } ]