[ { "title": "SETDB1: a novel KAP-1-associated histone H3, lysine 9-specific methyltransferase that contributes to HP1-mediated silencing of euchromatic genes by KRAB zinc-finger proteins.", "journal": "Genes & development", "date": "2002", "authors": "Schultz DC, Ayyanathan K, Negorev D, Maul GG, Rauscher FJ 3rd", "reference": { "type": "PubMed", "id": "11959841", "url": "https://pubmed.ncbi.nlm.nih.gov/11959841" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P17019-1", "protein_name": "Zinc finger protein 708", "gene_name": "ZNF708", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQX6-1", "protein_name": "Zinc finger protein 331", "gene_name": "ZNF331", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96SR6-1", "protein_name": "Zinc finger protein 382", "gene_name": "ZNF382", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB69-1", "protein_name": "Zinc finger protein 519", "gene_name": "ZNF519", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IVP9-1", "protein_name": "Zinc finger protein 547", "gene_name": "ZNF547", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9F8-1", "protein_name": "Zinc finger protein 454", "gene_name": "ZNF454", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEK3-2", "protein_name": "Histone-lysine N-methyltransferase, H3 lysine-79 specific", "gene_name": "DOT1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15047-1", "protein_name": "Histone-lysine N-methyltransferase SETDB1", "gene_name": "SETDB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZN18-1", "protein_name": "Zinc finger protein AEBP2", "gene_name": "AEBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15047-1", "protein_name": "Histone-lysine N-methyltransferase SETD1A", "gene_name": "SETD1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ4-1", "protein_name": "Histone-lysine N-methyltransferase 2C", "gene_name": "KMT2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13330-1", "protein_name": "Metastasis-associated protein MTA1", "gene_name": "MTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMN6-1", "protein_name": "Histone-lysine N-methyltransferase 2B", "gene_name": "KMT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15291-1", "protein_name": "Retinoblastoma-binding protein 5", "gene_name": "RBBP5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13547-1", "protein_name": "Histone deacetylase 1", "gene_name": "HDAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96L73-1", "protein_name": "Histone-lysine N-methyltransferase, H3 lysine-36 specific", "gene_name": "NSD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YP4-1", "protein_name": "Transcriptional repressor p66-alpha", "gene_name": "GATAD2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19838-1", "protein_name": "Nuclear factor NF-kappa-B p105 subunit", "gene_name": "NFKB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MU6-1", "protein_name": "Zinc finger protein 778", "gene_name": "ZNF778", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF45-1", "protein_name": "Zinc finger protein 418", "gene_name": "ZNF418", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RRD8-1", "protein_name": "Zinc finger protein 320", "gene_name": "ZNF320", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14593-1", "protein_name": "Zinc finger protein 273", "gene_name": "ZNF273", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IV72-1", "protein_name": "Zinc finger protein 425", "gene_name": "ZNF425", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAZ2-1", "protein_name": "Histone-lysine N-methyltransferase PRDM16", "gene_name": "PRDM16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPS6-1", "protein_name": "Histone-lysine N-methyltransferase SETD1B", "gene_name": "SETD1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBK2-1", "protein_name": "N-lysine methyltransferase SETD6", "gene_name": "SETD6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75530-1", "protein_name": "Polycomb protein EED", "gene_name": "EED", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86TU7-1", "protein_name": "Actin-histidine N-methyltransferase", "gene_name": "SETD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7B4-1", "protein_name": "Histone-lysine N-methyltransferase SMYD3", "gene_name": "SMYD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15910-1", "protein_name": "Histone-lysine N-methyltransferase EZH2", "gene_name": "EZH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BZ95-1", "protein_name": "Histone-lysine N-methyltransferase NSD3", "gene_name": "NSD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H5I1-1", "protein_name": "Histone-lysine N-methyltransferase SUV39H2", "gene_name": "SUV39H2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KQ7-1", "protein_name": "Histone-lysine N-methyltransferase EHMT2", "gene_name": "EHMT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6VMQ6-1", "protein_name": "Activating transcription factor 7-interacting protein 1", "gene_name": "ATF7IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR48-1", "protein_name": "Histone-lysine N-methyltransferase ASH1L", "gene_name": "ASH1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43463-1", "protein_name": "Histone-lysine N-methyltransferase SUV39H1", "gene_name": "SUV39H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13263-1", "protein_name": "Transcription intermediary factor 1-beta", "gene_name": "TRIM28", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95983-1", "protein_name": "Methyl-CpG-binding domain protein 3", "gene_name": "MBD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43296-1", "protein_name": "Zinc finger protein 264", "gene_name": "ZNF264", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09028-1", "protein_name": "Histone-binding protein RBBP4", "gene_name": "RBBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00653-1", "protein_name": "Nuclear factor NF-kappa-B p100 subunit", "gene_name": "NFKB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBL3-1", "protein_name": "Set1/Ash2 histone methyltransferase complex subunit ASH2", "gene_name": "ASH2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9C005-1", "protein_name": "Protein dpy-30 homolog", "gene_name": "DPY30", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61964-1", "protein_name": "WD repeat-containing protein 5", "gene_name": "WDR5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63279-1", "protein_name": "SUMO-conjugating enzyme UBC9", "gene_name": "UBE2I", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96028-1", "protein_name": "Histone-lysine N-methyltransferase NSD2", "gene_name": "NSD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14686-1", "protein_name": "Histone-lysine N-methyltransferase 2D", "gene_name": "KMT2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q03164-1", "protein_name": "Histone-lysine N-methyltransferase 2A", "gene_name": "KMT2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96T68-1", "protein_name": "Histone-lysine N-methyltransferase SETDB2", "gene_name": "SETDB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45973-1", "protein_name": "Chromobox protein homolog 5", "gene_name": "CBX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PQ6-1", "protein_name": "Zinc finger protein 317", "gene_name": "ZNF317", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q03112-7", "protein_name": "Histone-lysine N-methyltransferase MECOM", "gene_name": "MECOM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35789-1", "protein_name": "Zinc finger protein 93", "gene_name": "ZNF93", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9Z0-1", "protein_name": "Zinc finger protein 610", "gene_name": "ZNF610", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75467-1", "protein_name": "Zinc finger protein 324A", "gene_name": "ZNF324", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12873-1", "protein_name": "ATP-dependent chromatin remodeler CHD3", "gene_name": "CHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61956-1", "protein_name": "Small ubiquitin-related modifier 2", "gene_name": "SUMO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92769-1", "protein_name": "Histone deacetylase 2", "gene_name": "HDAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94776-1", "protein_name": "Metastasis-associated protein MTA2", "gene_name": "MTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9B1-1", "protein_name": "Histone-lysine N-methyltransferase EHMT1", "gene_name": "EHMT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTC8-1", "protein_name": "Metastasis-associated protein MTA3", "gene_name": "MTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQR1-1", "protein_name": "N-lysine methyltransferase KMT5A", "gene_name": "KMT5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4FZB7-1", "protein_name": "Histone-lysine N-methyltransferase KMT5B", "gene_name": "KMT5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRG4-1", "protein_name": "N-lysine methyltransferase SMYD2", "gene_name": "SMYD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQV7-1", "protein_name": "Histone-lysine N-methyltransferase PRDM9", "gene_name": "PRDM9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BYW2-1", "protein_name": "Histone-lysine N-methyltransferase SETD2", "gene_name": "SETD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTM1-1", "protein_name": "Histone H2A.J", "gene_name": "H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BS31-1", "protein_name": "Zinc finger protein 649", "gene_name": "ZNF649", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06730-1", "protein_name": "Zinc finger protein 33A", "gene_name": "ZNF33A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q1-1", "protein_name": "Zinc finger protein 257", "gene_name": "ZNF257", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17035-1", "protein_name": "Zinc finger protein 28", "gene_name": "ZNF28", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60765-1", "protein_name": "Zinc finger protein 354A", "gene_name": "ZNF354A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZL3-1", "protein_name": "Zinc finger protein 224", "gene_name": "ZNF224", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15928-1", "protein_name": "Zinc finger protein 141", "gene_name": "ZNF141", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17039-1", "protein_name": "Zinc finger protein 30", "gene_name": "ZNF30", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BR6-1", "protein_name": "Zinc finger protein 669", "gene_name": "ZNF669", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52737-1", "protein_name": "Zinc finger protein 136", "gene_name": "ZNF136", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86Y97-1", "protein_name": "Histone-lysine N-methyltransferase KMT5C", "gene_name": "KMT5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L2R6-1", "protein_name": "Zinc finger protein 765", "gene_name": "ZNF765", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WTS6-1", "protein_name": "Histone-lysine N-methyltransferase SETD7", "gene_name": "SETD7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15022-1", "protein_name": "Polycomb protein SUZ12", "gene_name": "SUZ12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q0VGE8-1", "protein_name": "Zinc finger protein 816", "gene_name": "ZNF816", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76KX8-1", "protein_name": "Zinc finger protein 534", "gene_name": "ZNF534", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEM1-1", "protein_name": "Zinc finger protein 680", "gene_name": "ZNF680", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI9-1", "protein_name": "Transcriptional repressor p66-beta", "gene_name": "GATAD2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q04206-1", "protein_name": "Transcription factor p65", "gene_name": "RELA", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P17019", "url": "https://www.uniprot.org/uniprotkb/P17019" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 1224, "end_pos": 1224, "sequence_org": "H", "sequence_mut": "K", "comment": "Abolishes methyltransferase activity.", "evidence": [ { "database": "UniProtKB", "id": "Q15047", "url": "https://www.uniprot.org/uniprotkb/Q15047" }, { "database": "PubMed", "id": "11959841", "url": "https://pubmed.ncbi.nlm.nih.gov/11959841" } ], "uniprot_canonical_ac": "Q15047-1" }, { "start_pos": 1226, "end_pos": 1226, "sequence_org": "C", "sequence_mut": "A", "comment": "Abolishes methyltransferase activity.", "evidence": [ { "database": "UniProtKB", "id": "Q15047", "url": "https://www.uniprot.org/uniprotkb/Q15047" }, { "database": "PubMed", "id": "11959841", "url": "https://pubmed.ncbi.nlm.nih.gov/11959841" }, { "database": "PubMed", "id": "39096901", "url": "https://pubmed.ncbi.nlm.nih.gov/39096901" } ], "uniprot_canonical_ac": "Q15047-1" }, { "start_pos": 1279, "end_pos": 1279, "sequence_org": "C", "sequence_mut": "Y", "comment": "Abolishes methyltransferase activity.", "evidence": [ { "database": "UniProtKB", "id": "Q15047", "url": "https://www.uniprot.org/uniprotkb/Q15047" }, { "database": "PubMed", "id": "11959841", "url": "https://pubmed.ncbi.nlm.nih.gov/11959841" } ], "uniprot_canonical_ac": "Q15047-1" }, { "start_pos": 729, "end_pos": 731, "sequence_org": "CDC", "sequence_mut": "LDP", "comment": "Abolishes methyltransferase activity.", "evidence": [ { "database": "UniProtKB", "id": "Q15047", "url": "https://www.uniprot.org/uniprotkb/Q15047" }, { "database": "PubMed", "id": "11959841", "url": "https://pubmed.ncbi.nlm.nih.gov/11959841" } ], "uniprot_canonical_ac": "Q15047-1" } ], "record_id": "pubmed.11959841", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 115 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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"field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Regulated recruitment of HP1 to a euchromatic gene induces mitotically heritable, epigenetic gene silencing: a mammalian cell culture model of gene variegation.", "journal": "Genes & development", "date": "2003-08-01", "authors": "Ayyanathan Kasirajan, Lechner Mark S, Bell Peter, Maul Gerd G, Schultz David C, Yamada Yoshihiko, Tanaka Kazuhiro, Torigoe Kiyoyuki, Rauscher Frank J", "reference": { "type": "PubMed", "id": "12869583", "url": "https://pubmed.ncbi.nlm.nih.gov/12869583" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P17019-1", "protein_name": "Zinc finger protein 708", "gene_name": "ZNF708", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQX6-1", "protein_name": "Zinc finger protein 331", "gene_name": "ZNF331", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96SR6-1", "protein_name": "Zinc finger protein 382", "gene_name": "ZNF382", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB69-1", "protein_name": "Zinc finger protein 519", "gene_name": "ZNF519", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IVP9-1", "protein_name": "Zinc finger protein 547", "gene_name": "ZNF547", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9F8-1", "protein_name": "Zinc finger protein 454", "gene_name": "ZNF454", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15047-1", "protein_name": "Histone-lysine N-methyltransferase SETDB1", "gene_name": "SETDB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13330-1", "protein_name": "Metastasis-associated protein MTA1", "gene_name": "MTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13547-1", "protein_name": "Histone deacetylase 1", "gene_name": "HDAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YP4-1", "protein_name": "Transcriptional repressor p66-alpha", "gene_name": "GATAD2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MU6-1", "protein_name": "Zinc finger protein 778", "gene_name": "ZNF778", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF45-1", "protein_name": "Zinc finger protein 418", "gene_name": "ZNF418", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RRD8-1", "protein_name": "Zinc finger protein 320", "gene_name": "ZNF320", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14593-1", "protein_name": "Zinc finger protein 273", "gene_name": "ZNF273", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IV72-1", "protein_name": "Zinc finger protein 425", "gene_name": "ZNF425", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6VMQ6-1", "protein_name": "Activating transcription factor 7-interacting protein 1", "gene_name": "ATF7IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13263-1", "protein_name": "Transcription intermediary factor 1-beta", "gene_name": "TRIM28", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95983-1", "protein_name": "Methyl-CpG-binding domain protein 3", "gene_name": "MBD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43296-1", "protein_name": "Zinc finger protein 264", "gene_name": "ZNF264", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09028-1", "protein_name": "Histone-binding protein RBBP4", "gene_name": "RBBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63279-1", "protein_name": "SUMO-conjugating enzyme UBC9", "gene_name": "UBE2I", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45973-1", "protein_name": "Chromobox protein homolog 5", "gene_name": "CBX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PQ6-1", "protein_name": "Zinc finger protein 317", "gene_name": "ZNF317", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35789-1", "protein_name": "Zinc finger protein 93", "gene_name": "ZNF93", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9Z0-1", "protein_name": "Zinc finger protein 610", "gene_name": "ZNF610", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75467-1", "protein_name": "Zinc finger protein 324A", "gene_name": "ZNF324", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12873-1", "protein_name": "ATP-dependent chromatin remodeler CHD3", "gene_name": "CHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61956-1", "protein_name": "Small ubiquitin-related modifier 2", "gene_name": "SUMO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92769-1", "protein_name": "Histone deacetylase 2", "gene_name": "HDAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94776-1", "protein_name": "Metastasis-associated protein MTA2", "gene_name": "MTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTC8-1", "protein_name": "Metastasis-associated protein MTA3", "gene_name": "MTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTM1-1", "protein_name": "Histone H2A.J", "gene_name": "H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BS31-1", "protein_name": "Zinc finger protein 649", "gene_name": "ZNF649", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06730-1", "protein_name": "Zinc finger protein 33A", "gene_name": "ZNF33A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q1-1", "protein_name": "Zinc finger protein 257", "gene_name": "ZNF257", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17035-1", "protein_name": "Zinc finger protein 28", "gene_name": "ZNF28", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60765-1", "protein_name": "Zinc finger protein 354A", "gene_name": "ZNF354A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZL3-1", "protein_name": "Zinc finger protein 224", "gene_name": "ZNF224", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15928-1", "protein_name": "Zinc finger protein 141", "gene_name": "ZNF141", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17039-1", "protein_name": "Zinc finger protein 30", "gene_name": "ZNF30", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BR6-1", "protein_name": "Zinc finger protein 669", "gene_name": "ZNF669", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52737-1", "protein_name": "Zinc finger protein 136", "gene_name": "ZNF136", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L2R6-1", "protein_name": "Zinc finger protein 765", "gene_name": "ZNF765", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q0VGE8-1", "protein_name": "Zinc finger protein 816", "gene_name": "ZNF816", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76KX8-1", "protein_name": "Zinc finger protein 534", "gene_name": "ZNF534", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEM1-1", "protein_name": "Zinc finger protein 680", "gene_name": "ZNF680", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI9-1", "protein_name": "Transcriptional repressor p66-beta", "gene_name": "GATAD2B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P17019", "url": "https://www.uniprot.org/uniprotkb/P17019" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12869583", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 76 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "mAM facilitates conversion by ESET of dimethyl to trimethyl lysine 9 of histone H3 to cause transcriptional repression.", "journal": "Molecular cell", "date": "2003", "authors": "Wang H, An W, Cao R, Xia L, Erdjument-Bromage H, Chatton B, Tempst P, Roeder RG, Zhang Y", "reference": { "type": "PubMed", "id": "14536086", "url": "https://pubmed.ncbi.nlm.nih.gov/14536086" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P17019-1", "protein_name": "Zinc finger protein 708", "gene_name": "ZNF708", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQX6-1", "protein_name": "Zinc finger protein 331", "gene_name": "ZNF331", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96SR6-1", "protein_name": "Zinc finger protein 382", "gene_name": "ZNF382", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB69-1", "protein_name": "Zinc finger protein 519", "gene_name": "ZNF519", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IVP9-1", "protein_name": "Zinc finger protein 547", "gene_name": "ZNF547", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9F8-1", "protein_name": "Zinc finger protein 454", "gene_name": "ZNF454", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TEK3-2", "protein_name": "Histone-lysine N-methyltransferase, H3 lysine-79 specific", "gene_name": "DOT1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15047-1", "protein_name": "Histone-lysine N-methyltransferase SETDB1", "gene_name": "SETDB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZN18-1", "protein_name": "Zinc finger protein AEBP2", "gene_name": "AEBP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15047-1", "protein_name": "Histone-lysine N-methyltransferase SETD1A", "gene_name": "SETD1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ4-1", "protein_name": "Histone-lysine N-methyltransferase 2C", "gene_name": "KMT2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13330-1", "protein_name": "Metastasis-associated protein MTA1", "gene_name": "MTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMN6-1", "protein_name": "Histone-lysine N-methyltransferase 2B", "gene_name": "KMT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15291-1", "protein_name": "Retinoblastoma-binding protein 5", "gene_name": "RBBP5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13547-1", "protein_name": "Histone deacetylase 1", "gene_name": "HDAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7TT18-1", "protein_name": "Activating transcription factor 7-interacting protein 1", "gene_name": "Atf7ip", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q96L73-1", "protein_name": "Histone-lysine N-methyltransferase, H3 lysine-36 specific", "gene_name": "NSD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YP4-1", "protein_name": "Transcriptional repressor p66-alpha", "gene_name": "GATAD2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19838-1", "protein_name": "Nuclear factor NF-kappa-B p105 subunit", "gene_name": "NFKB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MU6-1", "protein_name": "Zinc finger protein 778", "gene_name": "ZNF778", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF45-1", "protein_name": "Zinc finger protein 418", "gene_name": "ZNF418", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RRD8-1", "protein_name": "Zinc finger protein 320", "gene_name": "ZNF320", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14593-1", "protein_name": "Zinc finger protein 273", "gene_name": "ZNF273", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IV72-1", "protein_name": "Zinc finger protein 425", "gene_name": "ZNF425", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAZ2-1", "protein_name": "Histone-lysine N-methyltransferase PRDM16", "gene_name": "PRDM16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPS6-1", "protein_name": "Histone-lysine N-methyltransferase SETD1B", "gene_name": "SETD1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBK2-1", "protein_name": "N-lysine methyltransferase SETD6", "gene_name": "SETD6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75530-1", "protein_name": "Polycomb protein EED", "gene_name": "EED", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86TU7-1", "protein_name": "Actin-histidine N-methyltransferase", "gene_name": "SETD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7B4-1", "protein_name": "Histone-lysine N-methyltransferase SMYD3", "gene_name": "SMYD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15910-1", "protein_name": "Histone-lysine N-methyltransferase EZH2", "gene_name": "EZH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BZ95-1", "protein_name": "Histone-lysine N-methyltransferase NSD3", "gene_name": "NSD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H5I1-1", "protein_name": "Histone-lysine N-methyltransferase SUV39H2", "gene_name": "SUV39H2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KQ7-1", "protein_name": "Histone-lysine N-methyltransferase EHMT2", "gene_name": "EHMT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6VMQ6-1", "protein_name": "Activating transcription factor 7-interacting protein 1", "gene_name": "ATF7IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR48-1", "protein_name": "Histone-lysine N-methyltransferase ASH1L", "gene_name": "ASH1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43463-1", "protein_name": "Histone-lysine N-methyltransferase SUV39H1", "gene_name": "SUV39H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13263-1", "protein_name": "Transcription intermediary factor 1-beta", "gene_name": "TRIM28", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95983-1", "protein_name": "Methyl-CpG-binding domain protein 3", "gene_name": "MBD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43296-1", "protein_name": "Zinc finger protein 264", "gene_name": "ZNF264", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09028-1", "protein_name": "Histone-binding protein RBBP4", "gene_name": "RBBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00653-1", "protein_name": "Nuclear factor NF-kappa-B p100 subunit", "gene_name": "NFKB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBL3-1", "protein_name": "Set1/Ash2 histone methyltransferase complex subunit ASH2", "gene_name": "ASH2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9C005-1", "protein_name": "Protein dpy-30 homolog", "gene_name": "DPY30", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61964-1", "protein_name": "WD repeat-containing protein 5", "gene_name": "WDR5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63279-1", "protein_name": "SUMO-conjugating enzyme UBC9", "gene_name": "UBE2I", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96028-1", "protein_name": "Histone-lysine N-methyltransferase NSD2", "gene_name": "NSD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14686-1", "protein_name": "Histone-lysine N-methyltransferase 2D", "gene_name": "KMT2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q03164-1", "protein_name": "Histone-lysine N-methyltransferase 2A", "gene_name": "KMT2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96T68-1", "protein_name": "Histone-lysine N-methyltransferase SETDB2", "gene_name": "SETDB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45973-1", "protein_name": "Chromobox protein homolog 5", "gene_name": "CBX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PQ6-1", "protein_name": "Zinc finger protein 317", "gene_name": "ZNF317", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q03112-7", "protein_name": "Histone-lysine N-methyltransferase MECOM", "gene_name": "MECOM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35789-1", "protein_name": "Zinc finger protein 93", "gene_name": "ZNF93", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9Z0-1", "protein_name": "Zinc finger protein 610", "gene_name": "ZNF610", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75467-1", "protein_name": "Zinc finger protein 324A", "gene_name": "ZNF324", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12873-1", "protein_name": "ATP-dependent chromatin remodeler CHD3", "gene_name": "CHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61956-1", "protein_name": "Small ubiquitin-related modifier 2", "gene_name": "SUMO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92769-1", "protein_name": "Histone deacetylase 2", "gene_name": "HDAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94776-1", "protein_name": "Metastasis-associated protein MTA2", "gene_name": "MTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9B1-1", "protein_name": "Histone-lysine N-methyltransferase EHMT1", "gene_name": "EHMT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTC8-1", "protein_name": "Metastasis-associated protein MTA3", "gene_name": "MTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQR1-1", "protein_name": "N-lysine methyltransferase KMT5A", "gene_name": "KMT5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4FZB7-1", "protein_name": "Histone-lysine N-methyltransferase KMT5B", "gene_name": "KMT5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRG4-1", "protein_name": "N-lysine methyltransferase SMYD2", "gene_name": "SMYD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQV7-1", "protein_name": "Histone-lysine N-methyltransferase PRDM9", "gene_name": "PRDM9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BYW2-1", "protein_name": "Histone-lysine N-methyltransferase SETD2", "gene_name": "SETD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTM1-1", "protein_name": "Histone H2A.J", "gene_name": "H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BS31-1", "protein_name": "Zinc finger protein 649", "gene_name": "ZNF649", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06730-1", "protein_name": "Zinc finger protein 33A", "gene_name": "ZNF33A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q1-1", "protein_name": "Zinc finger protein 257", "gene_name": "ZNF257", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17035-1", "protein_name": "Zinc finger protein 28", "gene_name": "ZNF28", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60765-1", "protein_name": "Zinc finger protein 354A", "gene_name": "ZNF354A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZL3-1", "protein_name": "Zinc finger protein 224", "gene_name": "ZNF224", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15928-1", "protein_name": "Zinc finger protein 141", "gene_name": "ZNF141", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17039-1", "protein_name": "Zinc finger protein 30", "gene_name": "ZNF30", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BR6-1", "protein_name": "Zinc finger protein 669", "gene_name": "ZNF669", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52737-1", "protein_name": "Zinc finger protein 136", "gene_name": "ZNF136", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86Y97-1", "protein_name": "Histone-lysine N-methyltransferase KMT5C", "gene_name": "KMT5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L2R6-1", "protein_name": "Zinc finger protein 765", "gene_name": "ZNF765", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WTS6-1", "protein_name": "Histone-lysine N-methyltransferase SETD7", "gene_name": "SETD7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15022-1", "protein_name": "Polycomb protein SUZ12", "gene_name": "SUZ12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q0VGE8-1", "protein_name": "Zinc finger protein 816", "gene_name": "ZNF816", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76KX8-1", "protein_name": "Zinc finger protein 534", "gene_name": "ZNF534", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEM1-1", "protein_name": "Zinc finger protein 680", "gene_name": "ZNF680", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI9-1", "protein_name": "Transcriptional repressor p66-beta", "gene_name": "GATAD2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q04206-1", "protein_name": "Transcription factor p65", "gene_name": "RELA", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P17019", "url": "https://www.uniprot.org/uniprotkb/P17019" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.14536086", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 116 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The mammalian heterochromatin protein 1 binds diverse nuclear proteins through a common motif that targets the chromoshadow domain.", "journal": "Biochemical and biophysical research communications", "date": "2005-06-17", "authors": "Lechner Mark S, Schultz David C, Negorev Dmitri, Maul Gerd G, Rauscher Frank J", "reference": { "type": "PubMed", "id": "15882967", "url": "https://pubmed.ncbi.nlm.nih.gov/15882967" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P17019-1", "protein_name": "Zinc finger protein 708", "gene_name": "ZNF708", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQX6-1", "protein_name": "Zinc finger protein 331", "gene_name": "ZNF331", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96SR6-1", "protein_name": "Zinc finger protein 382", "gene_name": "ZNF382", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB69-1", "protein_name": "Zinc finger protein 519", "gene_name": "ZNF519", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IVP9-1", "protein_name": "Zinc finger protein 547", "gene_name": "ZNF547", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9F8-1", "protein_name": "Zinc finger protein 454", "gene_name": "ZNF454", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15047-1", "protein_name": "Histone-lysine N-methyltransferase SETDB1", "gene_name": "SETDB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13330-1", "protein_name": "Metastasis-associated protein MTA1", "gene_name": "MTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13547-1", "protein_name": "Histone deacetylase 1", "gene_name": "HDAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YP4-1", "protein_name": "Transcriptional repressor p66-alpha", "gene_name": "GATAD2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MU6-1", "protein_name": "Zinc finger protein 778", "gene_name": "ZNF778", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF45-1", "protein_name": "Zinc finger protein 418", "gene_name": "ZNF418", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RRD8-1", "protein_name": "Zinc finger protein 320", "gene_name": "ZNF320", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14593-1", "protein_name": "Zinc finger protein 273", "gene_name": "ZNF273", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IV72-1", "protein_name": "Zinc finger protein 425", "gene_name": "ZNF425", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6VMQ6-1", "protein_name": "Activating transcription factor 7-interacting protein 1", "gene_name": "ATF7IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13263-1", "protein_name": "Transcription intermediary factor 1-beta", "gene_name": "TRIM28", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95983-1", "protein_name": "Methyl-CpG-binding domain protein 3", "gene_name": "MBD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43296-1", "protein_name": "Zinc finger protein 264", "gene_name": "ZNF264", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09028-1", "protein_name": "Histone-binding protein RBBP4", "gene_name": "RBBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63279-1", "protein_name": "SUMO-conjugating enzyme UBC9", "gene_name": "UBE2I", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23497-1", "protein_name": "Nuclear autoantigen Sp-100", "gene_name": "SP100", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45973-1", "protein_name": "Chromobox protein homolog 5", "gene_name": "CBX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PQ6-1", "protein_name": "Zinc finger protein 317", "gene_name": "ZNF317", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35789-1", "protein_name": "Zinc finger protein 93", "gene_name": "ZNF93", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9Z0-1", "protein_name": "Zinc finger protein 610", "gene_name": "ZNF610", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75467-1", "protein_name": "Zinc finger protein 324A", "gene_name": "ZNF324", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12873-1", "protein_name": "ATP-dependent chromatin remodeler CHD3", "gene_name": "CHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13111-1", "protein_name": "Chromatin assembly factor 1 subunit A", "gene_name": "CHAF1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61956-1", "protein_name": "Small ubiquitin-related modifier 2", "gene_name": "SUMO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92769-1", "protein_name": "Histone deacetylase 2", "gene_name": "HDAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94776-1", "protein_name": "Metastasis-associated protein MTA2", "gene_name": "MTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTC8-1", "protein_name": "Metastasis-associated protein MTA3", "gene_name": "MTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTM1-1", "protein_name": "Histone H2A.J", "gene_name": "H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BS31-1", "protein_name": "Zinc finger protein 649", "gene_name": "ZNF649", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06730-1", "protein_name": "Zinc finger protein 33A", "gene_name": "ZNF33A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q1-1", "protein_name": "Zinc finger protein 257", "gene_name": "ZNF257", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17035-1", "protein_name": "Zinc finger protein 28", "gene_name": "ZNF28", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60765-1", "protein_name": "Zinc finger protein 354A", "gene_name": "ZNF354A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZL3-1", "protein_name": "Zinc finger protein 224", "gene_name": "ZNF224", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15928-1", "protein_name": "Zinc finger protein 141", "gene_name": "ZNF141", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17039-1", "protein_name": "Zinc finger protein 30", "gene_name": "ZNF30", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BR6-1", "protein_name": "Zinc finger protein 669", "gene_name": "ZNF669", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46100-1", "protein_name": "Chromatin remodeler ATRX", "gene_name": "ATRX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14739-1", "protein_name": "Delta(14)-sterol reductase LBR", "gene_name": "LBR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52737-1", "protein_name": "Zinc finger protein 136", "gene_name": "ZNF136", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L2R6-1", "protein_name": "Zinc finger protein 765", "gene_name": "ZNF765", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6KC79-1", "protein_name": "Nipped-B-like protein", "gene_name": "NIPBL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q0VGE8-1", "protein_name": "Zinc finger protein 816", "gene_name": "ZNF816", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76KX8-1", "protein_name": "Zinc finger protein 534", "gene_name": "ZNF534", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEM1-1", "protein_name": "Zinc finger protein 680", "gene_name": "ZNF680", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI9-1", "protein_name": "Transcriptional repressor p66-beta", "gene_name": "GATAD2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75886-1", "protein_name": "Signal transducing adapter molecule 2", "gene_name": "STAM2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P17019", "url": "https://www.uniprot.org/uniprotkb/P17019" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15882967", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 82 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "NXP-2 association with SUMO-2 depends on lysines required for transcriptional repression.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2006", "authors": "Rosendorff A, Sakakibara S, Lu S, Kieff E, Xuan Y, DiBacco A, Shi Y, Shi Y, Gill G", "reference": { "type": "PubMed", "id": "16567619", "url": "https://pubmed.ncbi.nlm.nih.gov/16567619" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P17019-1", "protein_name": "Zinc finger protein 708", "gene_name": "ZNF708", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQX6-1", "protein_name": "Zinc finger protein 331", "gene_name": "ZNF331", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96SR6-1", "protein_name": "Zinc finger protein 382", "gene_name": "ZNF382", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB69-1", "protein_name": "Zinc finger protein 519", "gene_name": "ZNF519", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IVP9-1", "protein_name": "Zinc finger protein 547", "gene_name": "ZNF547", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9F8-1", "protein_name": "Zinc finger protein 454", "gene_name": "ZNF454", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15047-1", "protein_name": "Histone-lysine N-methyltransferase SETDB1", "gene_name": "SETDB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13330-1", "protein_name": "Metastasis-associated protein MTA1", "gene_name": "MTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13547-1", "protein_name": "Histone deacetylase 1", "gene_name": "HDAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YP4-1", "protein_name": "Transcriptional repressor p66-alpha", "gene_name": "GATAD2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZL8-1", "protein_name": "Proline-, glutamic acid- and leucine-rich protein 1", "gene_name": "PELP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MU6-1", "protein_name": "Zinc finger protein 778", "gene_name": "ZNF778", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF45-1", "protein_name": "Zinc finger protein 418", "gene_name": "ZNF418", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RRD8-1", "protein_name": "Zinc finger protein 320", "gene_name": "ZNF320", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14593-1", "protein_name": "Zinc finger protein 273", "gene_name": "ZNF273", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IV72-1", "protein_name": "Zinc finger protein 425", "gene_name": "ZNF425", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14149-1", "protein_name": "MORC family CW-type zinc finger protein 3", "gene_name": "MORC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6VMQ6-1", "protein_name": "Activating transcription factor 7-interacting protein 1", "gene_name": "ATF7IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13263-1", "protein_name": "Transcription intermediary factor 1-beta", "gene_name": "TRIM28", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95983-1", "protein_name": "Methyl-CpG-binding domain protein 3", "gene_name": "MBD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43296-1", "protein_name": "Zinc finger protein 264", "gene_name": "ZNF264", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09028-1", "protein_name": "Histone-binding protein RBBP4", "gene_name": "RBBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63279-1", "protein_name": "SUMO-conjugating enzyme UBC9", "gene_name": "UBE2I", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45973-1", "protein_name": "Chromobox protein homolog 5", "gene_name": "CBX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PQ6-1", "protein_name": "Zinc finger protein 317", "gene_name": "ZNF317", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35789-1", "protein_name": "Zinc finger protein 93", "gene_name": "ZNF93", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9Z0-1", "protein_name": "Zinc finger protein 610", "gene_name": "ZNF610", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75467-1", "protein_name": "Zinc finger protein 324A", "gene_name": "ZNF324", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12873-1", "protein_name": "ATP-dependent chromatin remodeler CHD3", "gene_name": "CHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61956-1", "protein_name": "Small ubiquitin-related modifier 2", "gene_name": "SUMO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92769-1", "protein_name": "Histone deacetylase 2", "gene_name": "HDAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94776-1", "protein_name": "Metastasis-associated protein MTA2", "gene_name": "MTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTC8-1", "protein_name": "Metastasis-associated protein MTA3", "gene_name": "MTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTM1-1", "protein_name": "Histone H2A.J", "gene_name": "H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BS31-1", "protein_name": "Zinc finger protein 649", "gene_name": "ZNF649", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06730-1", "protein_name": "Zinc finger protein 33A", "gene_name": "ZNF33A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q1-1", "protein_name": "Zinc finger protein 257", "gene_name": "ZNF257", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17035-1", "protein_name": "Zinc finger protein 28", "gene_name": "ZNF28", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60765-1", "protein_name": "Zinc finger protein 354A", "gene_name": "ZNF354A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZL3-1", "protein_name": "Zinc finger protein 224", "gene_name": "ZNF224", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15928-1", "protein_name": "Zinc finger protein 141", "gene_name": "ZNF141", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17039-1", "protein_name": "Zinc finger protein 30", "gene_name": "ZNF30", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BR6-1", "protein_name": "Zinc finger protein 669", "gene_name": "ZNF669", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52737-1", "protein_name": "Zinc finger protein 136", "gene_name": "ZNF136", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L2R6-1", "protein_name": "Zinc finger protein 765", "gene_name": "ZNF765", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q0VGE8-1", "protein_name": "Zinc finger protein 816", "gene_name": "ZNF816", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76KX8-1", "protein_name": "Zinc finger protein 534", "gene_name": "ZNF534", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEM1-1", "protein_name": "Zinc finger protein 680", "gene_name": "ZNF680", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI9-1", "protein_name": "Transcriptional repressor p66-beta", "gene_name": "GATAD2B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P17019", "url": "https://www.uniprot.org/uniprotkb/P17019" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16567619", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 78 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The KAP1 corepressor functions to coordinate the assembly of de novo HP1-demarcated microenvironments of heterochromatin required for KRAB zinc finger protein-mediated transcriptional repression.", "journal": "Molecular and cellular biology", "date": "2006", "authors": "Sripathy SP, Stevens J, Schultz DC", "reference": { "type": "PubMed", "id": "16954381", "url": "https://pubmed.ncbi.nlm.nih.gov/16954381" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P17019-1", "protein_name": "Zinc finger protein 708", "gene_name": "ZNF708", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQX6-1", "protein_name": "Zinc finger protein 331", "gene_name": "ZNF331", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96SR6-1", "protein_name": "Zinc finger protein 382", "gene_name": "ZNF382", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB69-1", "protein_name": "Zinc finger protein 519", "gene_name": "ZNF519", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IVP9-1", "protein_name": "Zinc finger protein 547", "gene_name": "ZNF547", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9F8-1", "protein_name": "Zinc finger protein 454", "gene_name": "ZNF454", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15047-1", "protein_name": "Histone-lysine N-methyltransferase SETDB1", "gene_name": "SETDB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13330-1", "protein_name": "Metastasis-associated protein MTA1", "gene_name": "MTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13547-1", "protein_name": "Histone deacetylase 1", "gene_name": "HDAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YP4-1", "protein_name": "Transcriptional repressor p66-alpha", "gene_name": "GATAD2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MU6-1", "protein_name": "Zinc finger protein 778", "gene_name": "ZNF778", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF45-1", "protein_name": "Zinc finger protein 418", "gene_name": "ZNF418", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RRD8-1", "protein_name": "Zinc finger protein 320", "gene_name": "ZNF320", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14593-1", "protein_name": "Zinc finger protein 273", "gene_name": "ZNF273", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IV72-1", "protein_name": "Zinc finger protein 425", "gene_name": "ZNF425", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6VMQ6-1", "protein_name": "Activating transcription factor 7-interacting protein 1", "gene_name": "ATF7IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13263-1", "protein_name": "Transcription intermediary factor 1-beta", "gene_name": "TRIM28", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95983-1", "protein_name": "Methyl-CpG-binding domain protein 3", "gene_name": "MBD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43296-1", "protein_name": "Zinc finger protein 264", "gene_name": "ZNF264", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09028-1", "protein_name": "Histone-binding protein RBBP4", "gene_name": "RBBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63279-1", "protein_name": "SUMO-conjugating enzyme UBC9", "gene_name": "UBE2I", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45973-1", "protein_name": "Chromobox protein homolog 5", "gene_name": "CBX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PQ6-1", "protein_name": "Zinc finger protein 317", "gene_name": "ZNF317", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35789-1", "protein_name": "Zinc finger protein 93", "gene_name": "ZNF93", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9Z0-1", "protein_name": "Zinc finger protein 610", "gene_name": "ZNF610", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75467-1", "protein_name": "Zinc finger protein 324A", "gene_name": "ZNF324", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12873-1", "protein_name": "ATP-dependent chromatin remodeler CHD3", "gene_name": "CHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61956-1", "protein_name": "Small ubiquitin-related modifier 2", "gene_name": "SUMO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92769-1", "protein_name": "Histone deacetylase 2", "gene_name": "HDAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94776-1", "protein_name": "Metastasis-associated protein MTA2", "gene_name": "MTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTC8-1", "protein_name": "Metastasis-associated protein MTA3", "gene_name": "MTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTM1-1", "protein_name": "Histone H2A.J", "gene_name": "H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BS31-1", "protein_name": "Zinc finger protein 649", "gene_name": "ZNF649", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06730-1", "protein_name": "Zinc finger protein 33A", "gene_name": "ZNF33A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q1-1", "protein_name": "Zinc finger protein 257", "gene_name": "ZNF257", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17035-1", "protein_name": "Zinc finger protein 28", "gene_name": "ZNF28", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60765-1", "protein_name": "Zinc finger protein 354A", "gene_name": "ZNF354A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZL3-1", "protein_name": "Zinc finger protein 224", "gene_name": "ZNF224", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15928-1", "protein_name": "Zinc finger protein 141", "gene_name": "ZNF141", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17039-1", "protein_name": "Zinc finger protein 30", "gene_name": "ZNF30", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BR6-1", "protein_name": "Zinc finger protein 669", "gene_name": "ZNF669", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96GC6-1", "protein_name": "Neurotrophin receptor-interacting factor homolog", "gene_name": "ZNF274", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52737-1", "protein_name": "Zinc finger protein 136", "gene_name": "ZNF136", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L2R6-1", "protein_name": "Zinc finger protein 765", "gene_name": "ZNF765", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q0VGE8-1", "protein_name": "Zinc finger protein 816", "gene_name": "ZNF816", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76KX8-1", "protein_name": "Zinc finger protein 534", "gene_name": "ZNF534", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEM1-1", "protein_name": "Zinc finger protein 680", "gene_name": "ZNF680", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI9-1", "protein_name": "Transcriptional repressor p66-beta", "gene_name": "GATAD2B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P17019", "url": "https://www.uniprot.org/uniprotkb/P17019" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16954381", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 77 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Zinc finger-DNA recognition: crystal structure of a Zif268-DNA complex at 2.1 A.", "journal": "Science (New York, N.Y.)", "date": "1991", "authors": "Pavletich NP, Pabo CO", "reference": { "type": "PubMed", "id": "2028256", "url": "https://pubmed.ncbi.nlm.nih.gov/2028256" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P17019-1", "protein_name": "Zinc finger protein 708", "gene_name": "ZNF708", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQX6-1", "protein_name": "Zinc finger protein 331", "gene_name": "ZNF331", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96SR6-1", "protein_name": "Zinc finger protein 382", "gene_name": "ZNF382", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB69-1", "protein_name": "Zinc finger protein 519", "gene_name": "ZNF519", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IVP9-1", "protein_name": "Zinc finger protein 547", "gene_name": "ZNF547", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9F8-1", "protein_name": "Zinc finger protein 454", "gene_name": "ZNF454", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08046-1", "protein_name": "Early growth response protein 1", "gene_name": "Egr1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q15047-1", "protein_name": "Histone-lysine N-methyltransferase SETDB1", "gene_name": "SETDB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13330-1", "protein_name": "Metastasis-associated protein MTA1", "gene_name": "MTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13547-1", "protein_name": "Histone deacetylase 1", "gene_name": "HDAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YP4-1", "protein_name": "Transcriptional repressor p66-alpha", "gene_name": "GATAD2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MU6-1", "protein_name": "Zinc finger protein 778", "gene_name": "ZNF778", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF45-1", "protein_name": "Zinc finger protein 418", "gene_name": "ZNF418", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RRD8-1", "protein_name": "Zinc finger protein 320", "gene_name": "ZNF320", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14593-1", "protein_name": "Zinc finger protein 273", "gene_name": "ZNF273", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IV72-1", "protein_name": "Zinc finger protein 425", "gene_name": "ZNF425", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6VMQ6-1", "protein_name": "Activating transcription factor 7-interacting protein 1", "gene_name": "ATF7IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13263-1", "protein_name": "Transcription intermediary factor 1-beta", "gene_name": "TRIM28", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95983-1", "protein_name": "Methyl-CpG-binding domain protein 3", "gene_name": "MBD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43296-1", "protein_name": "Zinc finger protein 264", "gene_name": "ZNF264", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09028-1", "protein_name": "Histone-binding protein RBBP4", "gene_name": "RBBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63279-1", "protein_name": "SUMO-conjugating enzyme UBC9", "gene_name": "UBE2I", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45973-1", "protein_name": "Chromobox protein homolog 5", "gene_name": "CBX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PQ6-1", "protein_name": "Zinc finger protein 317", "gene_name": "ZNF317", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35789-1", "protein_name": "Zinc finger protein 93", "gene_name": "ZNF93", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9Z0-1", "protein_name": "Zinc finger protein 610", "gene_name": "ZNF610", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75467-1", "protein_name": "Zinc finger protein 324A", "gene_name": "ZNF324", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12873-1", "protein_name": "ATP-dependent chromatin remodeler CHD3", "gene_name": "CHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61956-1", "protein_name": "Small ubiquitin-related modifier 2", "gene_name": "SUMO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92769-1", "protein_name": "Histone deacetylase 2", "gene_name": "HDAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94776-1", "protein_name": "Metastasis-associated protein MTA2", "gene_name": "MTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTC8-1", "protein_name": "Metastasis-associated protein MTA3", "gene_name": "MTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTM1-1", "protein_name": "Histone H2A.J", "gene_name": "H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BS31-1", "protein_name": "Zinc finger protein 649", "gene_name": "ZNF649", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06730-1", "protein_name": "Zinc finger protein 33A", "gene_name": "ZNF33A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q1-1", "protein_name": "Zinc finger protein 257", "gene_name": "ZNF257", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17035-1", "protein_name": "Zinc finger protein 28", "gene_name": "ZNF28", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60765-1", "protein_name": "Zinc finger protein 354A", "gene_name": "ZNF354A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZL3-1", "protein_name": "Zinc finger protein 224", "gene_name": "ZNF224", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15928-1", "protein_name": "Zinc finger protein 141", "gene_name": "ZNF141", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17039-1", "protein_name": "Zinc finger protein 30", "gene_name": "ZNF30", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BR6-1", "protein_name": "Zinc finger protein 669", "gene_name": "ZNF669", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52737-1", "protein_name": "Zinc finger protein 136", "gene_name": "ZNF136", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L2R6-1", "protein_name": "Zinc finger protein 765", "gene_name": "ZNF765", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q0VGE8-1", "protein_name": "Zinc finger protein 816", "gene_name": "ZNF816", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76KX8-1", "protein_name": "Zinc finger protein 534", "gene_name": "ZNF534", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEM1-1", "protein_name": "Zinc finger protein 680", "gene_name": "ZNF680", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI9-1", "protein_name": "Transcriptional repressor p66-beta", "gene_name": "GATAD2B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P17019", "url": "https://www.uniprot.org/uniprotkb/P17019" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.2028256", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 77 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "An evolutionary arms race between KRAB zinc-finger genes ZNF91/93 and SVA/L1 retrotransposons.", "journal": "Nature", "date": "2014", "authors": "Jacobs FM, Greenberg D, Nguyen N, Haeussler M, Ewing AD, Katzman S, Paten B, Salama SR, Haussler D", "reference": { "type": "PubMed", "id": "25274305", "url": "https://pubmed.ncbi.nlm.nih.gov/25274305" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P17019-1", "protein_name": "Zinc finger protein 708", "gene_name": "ZNF708", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQX6-1", "protein_name": "Zinc finger protein 331", "gene_name": "ZNF331", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96SR6-1", "protein_name": "Zinc finger protein 382", "gene_name": "ZNF382", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB69-1", "protein_name": "Zinc finger protein 519", "gene_name": "ZNF519", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IVP9-1", "protein_name": "Zinc finger protein 547", "gene_name": "ZNF547", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9F8-1", "protein_name": "Zinc finger protein 454", "gene_name": "ZNF454", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15047-1", "protein_name": "Histone-lysine N-methyltransferase SETDB1", "gene_name": "SETDB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13330-1", "protein_name": "Metastasis-associated protein MTA1", "gene_name": "MTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13547-1", "protein_name": "Histone deacetylase 1", "gene_name": "HDAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YP4-1", "protein_name": "Transcriptional repressor p66-alpha", "gene_name": "GATAD2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MU6-1", "protein_name": "Zinc finger protein 778", "gene_name": "ZNF778", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF45-1", "protein_name": "Zinc finger protein 418", "gene_name": "ZNF418", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RRD8-1", "protein_name": "Zinc finger protein 320", "gene_name": "ZNF320", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14593-1", "protein_name": "Zinc finger protein 273", "gene_name": "ZNF273", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IV72-1", "protein_name": "Zinc finger protein 425", "gene_name": "ZNF425", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6VMQ6-1", "protein_name": "Activating transcription factor 7-interacting protein 1", "gene_name": "ATF7IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13263-1", "protein_name": "Transcription intermediary factor 1-beta", "gene_name": "TRIM28", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95983-1", "protein_name": "Methyl-CpG-binding domain protein 3", "gene_name": "MBD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43296-1", "protein_name": "Zinc finger protein 264", "gene_name": "ZNF264", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09028-1", "protein_name": "Histone-binding protein RBBP4", "gene_name": "RBBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63279-1", "protein_name": "SUMO-conjugating enzyme UBC9", "gene_name": "UBE2I", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45973-1", "protein_name": "Chromobox protein homolog 5", "gene_name": "CBX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PQ6-1", "protein_name": "Zinc finger protein 317", "gene_name": "ZNF317", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35789-1", "protein_name": "Zinc finger protein 93", "gene_name": "ZNF93", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q05481-1", "protein_name": "Zinc finger protein 91", "gene_name": "ZNF91", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9Z0-1", "protein_name": "Zinc finger protein 610", "gene_name": "ZNF610", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75467-1", "protein_name": "Zinc finger protein 324A", "gene_name": "ZNF324", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12873-1", "protein_name": "ATP-dependent chromatin remodeler CHD3", "gene_name": "CHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61956-1", "protein_name": "Small ubiquitin-related modifier 2", "gene_name": "SUMO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92769-1", "protein_name": "Histone deacetylase 2", "gene_name": "HDAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94776-1", "protein_name": "Metastasis-associated protein MTA2", "gene_name": "MTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTC8-1", "protein_name": "Metastasis-associated protein MTA3", "gene_name": "MTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTM1-1", "protein_name": "Histone H2A.J", "gene_name": "H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BS31-1", "protein_name": "Zinc finger protein 649", "gene_name": "ZNF649", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06730-1", "protein_name": "Zinc finger protein 33A", "gene_name": "ZNF33A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q1-1", "protein_name": "Zinc finger protein 257", "gene_name": "ZNF257", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17035-1", "protein_name": "Zinc finger protein 28", "gene_name": "ZNF28", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60765-1", "protein_name": "Zinc finger protein 354A", "gene_name": "ZNF354A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZL3-1", "protein_name": "Zinc finger protein 224", "gene_name": "ZNF224", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15928-1", "protein_name": "Zinc finger protein 141", "gene_name": "ZNF141", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17039-1", "protein_name": "Zinc finger protein 30", "gene_name": "ZNF30", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BR6-1", "protein_name": "Zinc finger protein 669", "gene_name": "ZNF669", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52737-1", "protein_name": "Zinc finger protein 136", "gene_name": "ZNF136", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L2R6-1", "protein_name": "Zinc finger protein 765", "gene_name": "ZNF765", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q0VGE8-1", "protein_name": "Zinc finger protein 816", "gene_name": "ZNF816", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76KX8-1", "protein_name": "Zinc finger protein 534", "gene_name": "ZNF534", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEM1-1", "protein_name": "Zinc finger protein 680", "gene_name": "ZNF680", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI9-1", "protein_name": "Transcriptional repressor p66-beta", "gene_name": "GATAD2B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P17019", "url": "https://www.uniprot.org/uniprotkb/P17019" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.25274305", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 77 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of the Enzymatic Activity of SETDB1 and Its 1:1 Complex with ATF7IP.", "journal": "Biochemistry", "date": "2016", "authors": "Basavapathruni A, Gureasko J, Porter Scott M, Hermans W, Godbole A, Leland PA, Boriack-Sjodin PA, Wigle TJ, Copeland RA, Riera TV", "reference": { "type": "PubMed", "id": "26813693", "url": "https://pubmed.ncbi.nlm.nih.gov/26813693" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P17019-1", "protein_name": "Zinc finger protein 708", "gene_name": "ZNF708", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQX6-1", "protein_name": "Zinc finger protein 331", "gene_name": "ZNF331", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96SR6-1", "protein_name": "Zinc finger protein 382", "gene_name": "ZNF382", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB69-1", "protein_name": "Zinc finger protein 519", "gene_name": "ZNF519", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IVP9-1", "protein_name": "Zinc finger protein 547", "gene_name": "ZNF547", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9F8-1", "protein_name": "Zinc finger protein 454", "gene_name": "ZNF454", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15047-1", "protein_name": "Histone-lysine N-methyltransferase SETDB1", "gene_name": "SETDB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13330-1", "protein_name": "Metastasis-associated protein MTA1", "gene_name": "MTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13547-1", "protein_name": "Histone deacetylase 1", "gene_name": "HDAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YP4-1", "protein_name": "Transcriptional repressor p66-alpha", "gene_name": "GATAD2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MU6-1", "protein_name": "Zinc finger protein 778", "gene_name": "ZNF778", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF45-1", "protein_name": "Zinc finger protein 418", "gene_name": "ZNF418", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RRD8-1", "protein_name": "Zinc finger protein 320", "gene_name": "ZNF320", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14593-1", "protein_name": "Zinc finger protein 273", "gene_name": "ZNF273", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IV72-1", "protein_name": "Zinc finger protein 425", "gene_name": "ZNF425", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6VMQ6-1", "protein_name": "Activating transcription factor 7-interacting protein 1", "gene_name": "ATF7IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13263-1", "protein_name": "Transcription intermediary factor 1-beta", "gene_name": "TRIM28", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95983-1", "protein_name": "Methyl-CpG-binding domain protein 3", "gene_name": "MBD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43296-1", "protein_name": "Zinc finger protein 264", "gene_name": "ZNF264", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09028-1", "protein_name": "Histone-binding protein RBBP4", "gene_name": "RBBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63279-1", "protein_name": "SUMO-conjugating enzyme UBC9", "gene_name": "UBE2I", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45973-1", "protein_name": "Chromobox protein homolog 5", "gene_name": "CBX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PQ6-1", "protein_name": "Zinc finger protein 317", "gene_name": "ZNF317", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35789-1", "protein_name": "Zinc finger protein 93", "gene_name": "ZNF93", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9Z0-1", "protein_name": "Zinc finger protein 610", "gene_name": "ZNF610", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75467-1", "protein_name": "Zinc finger protein 324A", "gene_name": "ZNF324", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12873-1", "protein_name": "ATP-dependent chromatin remodeler CHD3", "gene_name": "CHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61956-1", "protein_name": "Small ubiquitin-related modifier 2", "gene_name": "SUMO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92769-1", "protein_name": "Histone deacetylase 2", "gene_name": "HDAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94776-1", "protein_name": "Metastasis-associated protein MTA2", "gene_name": "MTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTC8-1", "protein_name": "Metastasis-associated protein MTA3", "gene_name": "MTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTM1-1", "protein_name": "Histone H2A.J", "gene_name": "H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BS31-1", "protein_name": "Zinc finger protein 649", "gene_name": "ZNF649", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06730-1", "protein_name": "Zinc finger protein 33A", "gene_name": "ZNF33A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q1-1", "protein_name": "Zinc finger protein 257", "gene_name": "ZNF257", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17035-1", "protein_name": "Zinc finger protein 28", "gene_name": "ZNF28", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60765-1", "protein_name": "Zinc finger protein 354A", "gene_name": "ZNF354A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZL3-1", "protein_name": "Zinc finger protein 224", "gene_name": "ZNF224", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15928-1", "protein_name": "Zinc finger protein 141", "gene_name": "ZNF141", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17039-1", "protein_name": "Zinc finger protein 30", "gene_name": "ZNF30", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BR6-1", "protein_name": "Zinc finger protein 669", "gene_name": "ZNF669", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52737-1", "protein_name": "Zinc finger protein 136", "gene_name": "ZNF136", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L2R6-1", "protein_name": "Zinc finger protein 765", "gene_name": "ZNF765", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q0VGE8-1", "protein_name": "Zinc finger protein 816", "gene_name": "ZNF816", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76KX8-1", "protein_name": "Zinc finger protein 534", "gene_name": "ZNF534", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEM1-1", "protein_name": "Zinc finger protein 680", "gene_name": "ZNF680", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI9-1", "protein_name": "Transcriptional repressor p66-beta", "gene_name": "GATAD2B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P17019", "url": "https://www.uniprot.org/uniprotkb/P17019" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.26813693", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 76 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "KRAB zinc-finger proteins contribute to the evolution of gene regulatory networks.", "journal": "Nature", "date": "2017", "authors": "Imbeault M, Helleboid PY, Trono D", "reference": { "type": "PubMed", "id": "28273063", "url": "https://pubmed.ncbi.nlm.nih.gov/28273063" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P17019-1", "protein_name": "Zinc finger protein 708", "gene_name": "ZNF708", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQX6-1", "protein_name": "Zinc finger protein 331", "gene_name": "ZNF331", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96SR6-1", "protein_name": "Zinc finger protein 382", "gene_name": "ZNF382", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB69-1", "protein_name": "Zinc finger protein 519", "gene_name": "ZNF519", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IVP9-1", "protein_name": "Zinc finger protein 547", "gene_name": "ZNF547", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9F8-1", "protein_name": "Zinc finger protein 454", "gene_name": "ZNF454", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15047-1", "protein_name": "Histone-lysine N-methyltransferase SETDB1", "gene_name": "SETDB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13330-1", "protein_name": "Metastasis-associated protein MTA1", "gene_name": "MTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13547-1", "protein_name": "Histone deacetylase 1", "gene_name": "HDAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YP4-1", "protein_name": "Transcriptional repressor p66-alpha", "gene_name": "GATAD2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MU6-1", "protein_name": "Zinc finger protein 778", "gene_name": "ZNF778", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF45-1", "protein_name": "Zinc finger protein 418", "gene_name": "ZNF418", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RRD8-1", "protein_name": "Zinc finger protein 320", "gene_name": "ZNF320", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14593-1", "protein_name": "Zinc finger protein 273", "gene_name": "ZNF273", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IV72-1", "protein_name": "Zinc finger protein 425", "gene_name": "ZNF425", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6VMQ6-1", "protein_name": "Activating transcription factor 7-interacting protein 1", "gene_name": "ATF7IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13263-1", "protein_name": "Transcription intermediary factor 1-beta", "gene_name": "TRIM28", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95983-1", "protein_name": "Methyl-CpG-binding domain protein 3", "gene_name": "MBD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43296-1", "protein_name": "Zinc finger protein 264", "gene_name": "ZNF264", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09028-1", "protein_name": "Histone-binding protein RBBP4", "gene_name": "RBBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63279-1", "protein_name": "SUMO-conjugating enzyme UBC9", "gene_name": "UBE2I", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45973-1", "protein_name": "Chromobox protein homolog 5", "gene_name": "CBX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PQ6-1", "protein_name": "Zinc finger protein 317", "gene_name": "ZNF317", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35789-1", "protein_name": "Zinc finger protein 93", "gene_name": "ZNF93", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9Z0-1", "protein_name": "Zinc finger protein 610", "gene_name": "ZNF610", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75467-1", "protein_name": "Zinc finger protein 324A", "gene_name": "ZNF324", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12873-1", "protein_name": "ATP-dependent chromatin remodeler CHD3", "gene_name": "CHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61956-1", "protein_name": "Small ubiquitin-related modifier 2", "gene_name": "SUMO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92769-1", "protein_name": "Histone deacetylase 2", "gene_name": "HDAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94776-1", "protein_name": "Metastasis-associated protein MTA2", "gene_name": "MTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTC8-1", "protein_name": "Metastasis-associated protein MTA3", "gene_name": "MTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTM1-1", "protein_name": "Histone H2A.J", "gene_name": "H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BS31-1", "protein_name": "Zinc finger protein 649", "gene_name": "ZNF649", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06730-1", "protein_name": "Zinc finger protein 33A", "gene_name": "ZNF33A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q1-1", "protein_name": "Zinc finger protein 257", "gene_name": "ZNF257", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17035-1", "protein_name": "Zinc finger protein 28", "gene_name": "ZNF28", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60765-1", "protein_name": "Zinc finger protein 354A", "gene_name": "ZNF354A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZL3-1", "protein_name": "Zinc finger protein 224", "gene_name": "ZNF224", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15928-1", "protein_name": "Zinc finger protein 141", "gene_name": "ZNF141", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17039-1", "protein_name": "Zinc finger protein 30", "gene_name": "ZNF30", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BR6-1", "protein_name": "Zinc finger protein 669", "gene_name": "ZNF669", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52737-1", "protein_name": "Zinc finger protein 136", "gene_name": "ZNF136", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L2R6-1", "protein_name": "Zinc finger protein 765", "gene_name": "ZNF765", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q0VGE8-1", "protein_name": "Zinc finger protein 816", "gene_name": "ZNF816", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76KX8-1", "protein_name": "Zinc finger protein 534", "gene_name": "ZNF534", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEM1-1", "protein_name": "Zinc finger protein 680", "gene_name": "ZNF680", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI9-1", "protein_name": "Transcriptional repressor p66-beta", "gene_name": "GATAD2B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P17019", "url": "https://www.uniprot.org/uniprotkb/P17019" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.28273063", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 76 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structure of KAP1 tripartite motif identifies molecular interfaces required for retroelement silencing.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2019", "authors": "Stoll GA, Oda SI, Chong ZS, Yu M, McLaughlin SH, Modis Y", "reference": { "type": "PubMed", "id": "31289231", "url": "https://pubmed.ncbi.nlm.nih.gov/31289231" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P17019-1", "protein_name": "Zinc finger protein 708", "gene_name": "ZNF708", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQX6-1", "protein_name": "Zinc finger protein 331", "gene_name": "ZNF331", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96SR6-1", "protein_name": "Zinc finger protein 382", "gene_name": "ZNF382", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB69-1", "protein_name": "Zinc finger protein 519", "gene_name": "ZNF519", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IVP9-1", "protein_name": "Zinc finger protein 547", "gene_name": "ZNF547", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9F8-1", "protein_name": "Zinc finger protein 454", "gene_name": "ZNF454", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15047-1", "protein_name": "Histone-lysine N-methyltransferase SETDB1", "gene_name": "SETDB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13330-1", "protein_name": "Metastasis-associated protein MTA1", "gene_name": "MTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13547-1", "protein_name": "Histone deacetylase 1", "gene_name": "HDAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YP4-1", "protein_name": "Transcriptional repressor p66-alpha", "gene_name": "GATAD2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MU6-1", "protein_name": "Zinc finger protein 778", "gene_name": "ZNF778", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF45-1", "protein_name": "Zinc finger protein 418", "gene_name": "ZNF418", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RRD8-1", "protein_name": "Zinc finger protein 320", "gene_name": "ZNF320", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14593-1", "protein_name": "Zinc finger protein 273", "gene_name": "ZNF273", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IV72-1", "protein_name": "Zinc finger protein 425", "gene_name": "ZNF425", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6VMQ6-1", "protein_name": "Activating transcription factor 7-interacting protein 1", "gene_name": "ATF7IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13263-1", "protein_name": "Transcription intermediary factor 1-beta", "gene_name": "TRIM28", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95983-1", "protein_name": "Methyl-CpG-binding domain protein 3", "gene_name": "MBD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43296-1", "protein_name": "Zinc finger protein 264", "gene_name": "ZNF264", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09028-1", "protein_name": "Histone-binding protein RBBP4", "gene_name": "RBBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63279-1", "protein_name": "SUMO-conjugating enzyme UBC9", "gene_name": "UBE2I", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45973-1", "protein_name": "Chromobox protein homolog 5", "gene_name": "CBX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PQ6-1", "protein_name": "Zinc finger protein 317", "gene_name": "ZNF317", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35789-1", "protein_name": "Zinc finger protein 93", "gene_name": "ZNF93", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9Z0-1", "protein_name": "Zinc finger protein 610", "gene_name": "ZNF610", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75467-1", "protein_name": "Zinc finger protein 324A", "gene_name": "ZNF324", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12873-1", "protein_name": "ATP-dependent chromatin remodeler CHD3", "gene_name": "CHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61956-1", "protein_name": "Small ubiquitin-related modifier 2", "gene_name": "SUMO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92769-1", "protein_name": "Histone deacetylase 2", "gene_name": "HDAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94776-1", "protein_name": "Metastasis-associated protein MTA2", "gene_name": "MTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTC8-1", "protein_name": "Metastasis-associated protein MTA3", "gene_name": "MTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTM1-1", "protein_name": "Histone H2A.J", "gene_name": "H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BS31-1", "protein_name": "Zinc finger protein 649", "gene_name": "ZNF649", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06730-1", "protein_name": "Zinc finger protein 33A", "gene_name": "ZNF33A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q1-1", "protein_name": "Zinc finger protein 257", "gene_name": "ZNF257", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17035-1", "protein_name": "Zinc finger protein 28", "gene_name": "ZNF28", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60765-1", "protein_name": "Zinc finger protein 354A", "gene_name": "ZNF354A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZL3-1", "protein_name": "Zinc finger protein 224", "gene_name": "ZNF224", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15928-1", "protein_name": "Zinc finger protein 141", "gene_name": "ZNF141", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17039-1", "protein_name": "Zinc finger protein 30", "gene_name": "ZNF30", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BR6-1", "protein_name": "Zinc finger protein 669", "gene_name": "ZNF669", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52737-1", "protein_name": "Zinc finger protein 136", "gene_name": "ZNF136", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L2R6-1", "protein_name": "Zinc finger protein 765", "gene_name": "ZNF765", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q0VGE8-1", "protein_name": "Zinc finger protein 816", "gene_name": "ZNF816", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76KX8-1", "protein_name": "Zinc finger protein 534", "gene_name": "ZNF534", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEM1-1", "protein_name": "Zinc finger protein 680", "gene_name": "ZNF680", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI9-1", "protein_name": "Transcriptional repressor p66-beta", "gene_name": "GATAD2B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P17019", "url": "https://www.uniprot.org/uniprotkb/P17019" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.31289231", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 76 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "KAP1 is an antiparallel dimer with a functional asymmetry.", "journal": "Life science alliance", "date": "2019", "authors": "Fonti G, Marcaida MJ, Bryan LC, Trager S, Kalantzi AS, Helleboid PJ, Demurtas D, Tully MD, Grudinin S, Trono D, Fierz B, Dal Peraro M", "reference": { "type": "PubMed", "id": "31427381", "url": "https://pubmed.ncbi.nlm.nih.gov/31427381" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P17019-1", "protein_name": "Zinc finger protein 708", "gene_name": "ZNF708", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQX6-1", "protein_name": "Zinc finger protein 331", "gene_name": "ZNF331", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96SR6-1", "protein_name": "Zinc finger protein 382", "gene_name": "ZNF382", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB69-1", "protein_name": "Zinc finger protein 519", "gene_name": "ZNF519", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IVP9-1", "protein_name": "Zinc finger protein 547", "gene_name": "ZNF547", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9F8-1", "protein_name": "Zinc finger protein 454", "gene_name": "ZNF454", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15047-1", "protein_name": "Histone-lysine N-methyltransferase SETDB1", "gene_name": "SETDB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13330-1", "protein_name": "Metastasis-associated protein MTA1", "gene_name": "MTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13547-1", "protein_name": "Histone deacetylase 1", "gene_name": "HDAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YP4-1", "protein_name": "Transcriptional repressor p66-alpha", "gene_name": "GATAD2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MU6-1", "protein_name": "Zinc finger protein 778", "gene_name": "ZNF778", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF45-1", "protein_name": "Zinc finger protein 418", "gene_name": "ZNF418", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RRD8-1", "protein_name": "Zinc finger protein 320", "gene_name": "ZNF320", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14593-1", "protein_name": "Zinc finger protein 273", "gene_name": "ZNF273", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IV72-1", "protein_name": "Zinc finger protein 425", "gene_name": "ZNF425", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6VMQ6-1", "protein_name": "Activating transcription factor 7-interacting protein 1", "gene_name": "ATF7IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13263-1", "protein_name": "Transcription intermediary factor 1-beta", "gene_name": "TRIM28", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95983-1", "protein_name": "Methyl-CpG-binding domain protein 3", "gene_name": "MBD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43296-1", "protein_name": "Zinc finger protein 264", "gene_name": "ZNF264", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09028-1", "protein_name": "Histone-binding protein RBBP4", "gene_name": "RBBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63279-1", "protein_name": "SUMO-conjugating enzyme UBC9", "gene_name": "UBE2I", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45973-1", "protein_name": "Chromobox protein homolog 5", "gene_name": "CBX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PQ6-1", "protein_name": "Zinc finger protein 317", "gene_name": "ZNF317", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35789-1", "protein_name": "Zinc finger protein 93", "gene_name": "ZNF93", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9Z0-1", "protein_name": "Zinc finger protein 610", "gene_name": "ZNF610", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75467-1", "protein_name": "Zinc finger protein 324A", "gene_name": "ZNF324", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12873-1", "protein_name": "ATP-dependent chromatin remodeler CHD3", "gene_name": "CHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61956-1", "protein_name": "Small ubiquitin-related modifier 2", "gene_name": "SUMO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92769-1", "protein_name": "Histone deacetylase 2", "gene_name": "HDAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94776-1", "protein_name": "Metastasis-associated protein MTA2", "gene_name": "MTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTC8-1", "protein_name": "Metastasis-associated protein MTA3", "gene_name": "MTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTM1-1", "protein_name": "Histone H2A.J", "gene_name": "H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BS31-1", "protein_name": "Zinc finger protein 649", "gene_name": "ZNF649", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06730-1", "protein_name": "Zinc finger protein 33A", "gene_name": "ZNF33A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q1-1", "protein_name": "Zinc finger protein 257", "gene_name": "ZNF257", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17035-1", "protein_name": "Zinc finger protein 28", "gene_name": "ZNF28", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60765-1", "protein_name": "Zinc finger protein 354A", "gene_name": "ZNF354A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZL3-1", "protein_name": "Zinc finger protein 224", "gene_name": "ZNF224", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15928-1", "protein_name": "Zinc finger protein 141", "gene_name": "ZNF141", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17039-1", "protein_name": "Zinc finger protein 30", "gene_name": "ZNF30", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BR6-1", "protein_name": "Zinc finger protein 669", "gene_name": "ZNF669", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52737-1", "protein_name": "Zinc finger protein 136", "gene_name": "ZNF136", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L2R6-1", "protein_name": "Zinc finger protein 765", "gene_name": "ZNF765", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q0VGE8-1", "protein_name": "Zinc finger protein 816", "gene_name": "ZNF816", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76KX8-1", "protein_name": "Zinc finger protein 534", "gene_name": "ZNF534", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEM1-1", "protein_name": "Zinc finger protein 680", "gene_name": "ZNF680", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI9-1", "protein_name": "Transcriptional repressor p66-beta", "gene_name": "GATAD2B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P17019", "url": "https://www.uniprot.org/uniprotkb/P17019" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.31427381", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 76 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Transcriptional repression by RING finger protein TIF1 beta that interacts with the KRAB repressor domain of KOX1.", "journal": "Nucleic acids research", "date": "1996-12-15", "authors": "Moosmann P, Georgiev O, Le Douarin B, Bourquin J P, Schaffner W", "reference": { "type": "PubMed", "id": "9016654", "url": "https://pubmed.ncbi.nlm.nih.gov/9016654" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P17019-1", "protein_name": "Zinc finger protein 708", "gene_name": "ZNF708", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQX6-1", "protein_name": "Zinc finger protein 331", "gene_name": "ZNF331", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96SR6-1", "protein_name": "Zinc finger protein 382", "gene_name": "ZNF382", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB69-1", "protein_name": "Zinc finger protein 519", "gene_name": "ZNF519", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IVP9-1", "protein_name": "Zinc finger protein 547", "gene_name": "ZNF547", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9F8-1", "protein_name": "Zinc finger protein 454", "gene_name": "ZNF454", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15047-1", "protein_name": "Histone-lysine N-methyltransferase SETDB1", "gene_name": "SETDB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13330-1", "protein_name": "Metastasis-associated protein MTA1", "gene_name": "MTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13547-1", "protein_name": "Histone deacetylase 1", "gene_name": "HDAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YP4-1", "protein_name": "Transcriptional repressor p66-alpha", "gene_name": "GATAD2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MU6-1", "protein_name": "Zinc finger protein 778", "gene_name": "ZNF778", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF45-1", "protein_name": "Zinc finger protein 418", "gene_name": "ZNF418", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2RRD8-1", "protein_name": "Zinc finger protein 320", "gene_name": "ZNF320", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14593-1", "protein_name": "Zinc finger protein 273", "gene_name": "ZNF273", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IV72-1", "protein_name": "Zinc finger protein 425", "gene_name": "ZNF425", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6VMQ6-1", "protein_name": "Activating transcription factor 7-interacting protein 1", "gene_name": "ATF7IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13263-1", "protein_name": "Transcription intermediary factor 1-beta", "gene_name": "TRIM28", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95983-1", "protein_name": "Methyl-CpG-binding domain protein 3", "gene_name": "MBD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43296-1", "protein_name": "Zinc finger protein 264", "gene_name": "ZNF264", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09028-1", "protein_name": "Histone-binding protein RBBP4", "gene_name": "RBBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63279-1", "protein_name": "SUMO-conjugating enzyme UBC9", "gene_name": "UBE2I", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45973-1", "protein_name": "Chromobox protein homolog 5", "gene_name": "CBX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PQ6-1", "protein_name": "Zinc finger protein 317", "gene_name": "ZNF317", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35789-1", "protein_name": "Zinc finger protein 93", "gene_name": "ZNF93", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9Z0-1", "protein_name": "Zinc finger protein 610", "gene_name": "ZNF610", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75467-1", "protein_name": "Zinc finger protein 324A", "gene_name": "ZNF324", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12873-1", "protein_name": "ATP-dependent chromatin remodeler CHD3", "gene_name": "CHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61956-1", "protein_name": "Small ubiquitin-related modifier 2", "gene_name": "SUMO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92769-1", "protein_name": "Histone deacetylase 2", "gene_name": "HDAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94776-1", "protein_name": "Metastasis-associated protein MTA2", "gene_name": "MTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTC8-1", "protein_name": "Metastasis-associated protein MTA3", "gene_name": "MTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTM1-1", "protein_name": "Histone H2A.J", "gene_name": "H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BS31-1", "protein_name": "Zinc finger protein 649", "gene_name": "ZNF649", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06730-1", "protein_name": "Zinc finger protein 33A", "gene_name": "ZNF33A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q1-1", "protein_name": "Zinc finger protein 257", "gene_name": "ZNF257", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17035-1", "protein_name": "Zinc finger protein 28", "gene_name": "ZNF28", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60765-1", "protein_name": "Zinc finger protein 354A", "gene_name": "ZNF354A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZL3-1", "protein_name": "Zinc finger protein 224", "gene_name": "ZNF224", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15928-1", "protein_name": "Zinc finger protein 141", "gene_name": "ZNF141", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17039-1", "protein_name": "Zinc finger protein 30", "gene_name": "ZNF30", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BR6-1", "protein_name": "Zinc finger protein 669", "gene_name": "ZNF669", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52737-1", "protein_name": "Zinc finger protein 136", "gene_name": "ZNF136", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L2R6-1", "protein_name": "Zinc finger protein 765", "gene_name": "ZNF765", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q0VGE8-1", "protein_name": "Zinc finger protein 816", "gene_name": "ZNF816", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76KX8-1", "protein_name": "Zinc finger protein 534", "gene_name": "ZNF534", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEM1-1", "protein_name": "Zinc finger protein 680", "gene_name": "ZNF680", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI9-1", "protein_name": "Transcriptional repressor p66-beta", "gene_name": "GATAD2B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", 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[] } ] }, { "title": "Genomic sequence and transcriptional profile of the boundary between pericentromeric satellites and genes on human chromosome arm 10p.", "journal": "Genome Res.", "date": "2003", "authors": "Guy Jane, Hearn Tom, Crosier Moira, Mudge Jonathan, Viggiano Luigi, Koczan Dirk, Thiesen Hans-Jurgen, Bailey Jeffrey A, Horvath Julie E, Eichler Evan E, Earthrowl Mark E, Deloukas Panos, French Lisa, Rogers Jane, Bentley David, Jackson Michael S", "reference": { "type": "PubMed", "id": "12566394", "url": "https://pubmed.ncbi.nlm.nih.gov/12566394" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8NDW4-1", "protein_name": "Zinc finger protein 248", "gene_name": "ZNF248", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17032-1", "protein_name": "Zinc finger protein 37A", "gene_name": "ZNF37A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06732-1", "protein_name": "Zinc finger protein 33B", "gene_name": "ZNF33B", "tax_name": "Human" } ], 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Gene-based analysis identified the gene ZNF248 is associated with late-onset asthma in African Americans.", "journal": "Annals of allergy, asthma & immunology : official publication of the American College of Allergy, Asthma, & Immunology", "date": "2016", "authors": "Wang L, Salinas YD, DeWan AT", "reference": { "type": "PubMed", "id": "27238579", "url": "https://pubmed.ncbi.nlm.nih.gov/27238579" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8NDW4-1", "protein_name": "Zinc finger protein 248", "gene_name": "ZNF248", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8NDW4", "url": "https://www.uniprot.org/uniprotkb/Q8NDW4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.27238579", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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}, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Common genetic variation in multiple metabolic pathways influences susceptibility to low HDL-cholesterol and coronary heart disease.", "journal": "Journal of lipid research", "date": "2010", "authors": "Peloso GM, Demissie S, Collins D, Mirel DB, Gabriel SB, Cupples LA, Robins SJ, Schaefer EJ, Brousseau ME", "reference": { "type": "PubMed", "id": "20855565", "url": "https://pubmed.ncbi.nlm.nih.gov/20855565" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q3ZCX4-1", "protein_name": "Zinc finger protein 568", "gene_name": "ZNF568", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95006-1", "protein_name": "Olfactory receptor 2F2", "gene_name": "OR2F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCW5-1", "protein_name": "NAD(P)H-hydrate epimerase", "gene_name": "NAXE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q3ZCX4", "url": "https://www.uniprot.org/uniprotkb/Q3ZCX4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20855565", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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Chem.", "date": "2012", "authors": "Wang W, Guo M, Hu L, Cai J, Zeng Y, Luo J, Shu Z, Li W, Huang Z", "reference": { "type": "PubMed", "id": "23091055", "url": "https://pubmed.ncbi.nlm.nih.gov/23091055" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q14587-1", "protein_name": "Zinc finger protein 268", "gene_name": "ZNF268", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15111-1", "protein_name": "Inhibitor of nuclear factor kappa-B kinase subunit alpha", "gene_name": "CHUK", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14920-1", "protein_name": "Inhibitor of nuclear factor kappa-B kinase subunit beta", "gene_name": "IKBKB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q14587", "url": "https://www.uniprot.org/uniprotkb/Q14587" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.23091055", 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Struct. Funct. Genomics", "date": "2015", "authors": "Tochio N, Umehara T, Nakabayashi K, Yoneyama M, Tsuda K, Shirouzu M, Koshiba S, Watanabe S, Kigawa T, Sasazuki T, Shirasawa S, Yokoyama S", "reference": { "type": "PubMed", "id": "25801860", "url": "https://pubmed.ncbi.nlm.nih.gov/25801860" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P243-1", "protein_name": "Zinc finger protein ZFAT", "gene_name": "ZFAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7TS63-1", "protein_name": "Zinc finger protein ZFAT", "gene_name": "Zfat", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P243", "url": "https://www.uniprot.org/uniprotkb/Q9P243" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.25801860", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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Alasmari A, Banu S, Sultan T, Saleh MM, Alkuraya H, Salih MA, Aldhalaan H, Ben-Omran T, Al Musafri F, Ali R, Suleiman J, Tabarki B, El-Hattab AW, Bupp C, Alfadhel M, Al Tassan N, Monies D, Arold ST, Abouelhoda M, Lashley T, Houlden H, Faqeih E, Alkuraya FS", "reference": { "type": "PubMed", "id": "28940097", "url": "https://pubmed.ncbi.nlm.nih.gov/28940097" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P243-1", "protein_name": "Zinc finger protein ZFAT", "gene_name": "ZFAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5H3-1", "protein_name": "Protocadherin gamma-A10", "gene_name": "PCDHGA10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86UX6-1", "protein_name": "Serine/threonine-protein kinase 32C", "gene_name": "STK32C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2G2-1", "protein_name": "STE20-like serine/threonine-protein kinase", "gene_name": "SLK", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75129-1", 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "ZFAT binds to centromeres to control noncoding RNA transcription through the KAT2B-H4K8ac-BRD4 axis.", "journal": "Nucleic acids research", "date": "2020", "authors": "Ishikura S, Nakabayashi K, Nagai M, Tsunoda T, Shirasawa S", "reference": { "type": "PubMed", "id": "32997115", "url": "https://pubmed.ncbi.nlm.nih.gov/32997115" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P243-1", "protein_name": "Zinc finger protein ZFAT", "gene_name": "ZFAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7TS63-1", "protein_name": "Zinc finger protein ZFAT", "gene_name": "Zfat", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P243", "url": "https://www.uniprot.org/uniprotkb/Q9P243" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.32997115", "abstract": "", 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"Using piggyBac transposon gene expression vectors to transfect Zscan5b gene into mouse pluripotent stem cells.", "journal": "STAR protocols", "date": "2021", "authors": "Yamada M, Sugawara T, Usami S, Nakanishi R, Akustu H", "reference": { "type": "PubMed", "id": "34541557", "url": "https://pubmed.ncbi.nlm.nih.gov/34541557" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A6NJL1-1", "protein_name": "Zinc finger and SCAN domain-containing protein 5B", "gene_name": "ZSCAN5B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "A6NJL1", "url": "https://www.uniprot.org/uniprotkb/A6NJL1" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.34541557", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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[] } ] }, { "title": "Laminin-111 and the Level of Nuclear Actin Regulate Epithelial Quiescence via Exportin-6.", "journal": "Cell reports", "date": "2017", "authors": "Fiore APZP, Spencer VA, Mori H, Carvalho HF, Bissell MJ, Bruni-Cardoso A", "reference": { "type": "PubMed", "id": "28591581", "url": "https://pubmed.ncbi.nlm.nih.gov/28591581" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96QU8-1", "protein_name": "Exportin-6", "gene_name": "XPO6", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96QU8", "url": "https://www.uniprot.org/uniprotkb/Q96QU8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.28591581", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": 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Biophys. Acta", "date": "1999", "authors": "Li XA, Kokame K, Okubo K, Shimokado K, Tsukamoto Y, Miyata T, Kato H, Yutani C", "reference": { "type": "PubMed", "id": "10673043", "url": "https://pubmed.ncbi.nlm.nih.gov/10673043" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UII5-1", "protein_name": "Zinc finger protein 107", "gene_name": "ZNF107", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UII5", "url": "https://www.uniprot.org/uniprotkb/Q9UII5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10673043", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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"glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cytoplasmic dynein heavy chain 1b is required for flagellar assembly in Chlamydomonas.", "journal": "Molecular biology of the cell", "date": "1999", "authors": "Porter ME, Bower R, Knott JA, Byrd P, Dentler W", "reference": { "type": "PubMed", "id": "10069812", "url": "https://pubmed.ncbi.nlm.nih.gov/10069812" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10069812", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 54 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": 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"count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Protein particles in Chlamydomonas flagella undergo a transport cycle consisting of four phases.", "journal": "The Journal of cell biology", "date": "2001", "authors": "Iomini C, Babaev-Khaimov V, Sassaroli M, Piperno G", "reference": { "type": "PubMed", "id": "11285270", "url": "https://pubmed.ncbi.nlm.nih.gov/11285270" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11285270", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 54 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "G-protein signaling through tubby proteins.", "journal": "Science (New York, N.Y.)", "date": "2001", "authors": "Santagata S, Boggon TJ, Baird CL, Gomez CA, Zhao J, Shan WS, Myszka DG, Shapiro L", "reference": { "type": "PubMed", "id": "11375483", "url": "https://pubmed.ncbi.nlm.nih.gov/11375483" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22694-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit beta", "gene_name": "PRKACB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13635-1", "protein_name": "Protein patched homolog 1", "gene_name": "PTCH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JWF2-1", "protein_name": "Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas", "gene_name": "GNAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD6-1", "protein_name": "Protein inturned", "gene_name": "INTU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit gamma", "gene_name": "PRKACG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2M1P5-1", "protein_name": "Kinesin-like protein KIF7", "gene_name": "KIF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50586-1", "protein_name": "Tubby protein", "gene_name": "Tub", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6U8-1", "protein_name": "G protein-coupled receptor 161", "gene_name": "GPR161", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13861-1", "protein_name": "cAMP-dependent protein kinase type II-alpha regulatory subunit", "gene_name": "PRKAR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08151-1", "protein_name": "Transcription activator GLI1", "gene_name": "GLI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75386-1", "protein_name": "Tubby-related protein 3", "gene_name": "TULP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95622-1", "protein_name": "Adenylate cyclase type 5", "gene_name": "ADCY5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08828-1", "protein_name": "Adenylate cyclase type 1", "gene_name": "ADCY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40145-1", "protein_name": "Adenylate cyclase type 8", "gene_name": "ADCY8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFM4-1", "protein_name": "Adenylate cyclase type 4", "gene_name": "ADCY4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31321-1", "protein_name": "cAMP-dependent protein kinase type I-beta regulatory subunit", "gene_name": "PRKAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C 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"glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Patched acts catalytically to suppress the activity of Smoothened.", "journal": "Nature", "date": "2002", "authors": "Taipale J, Cooper MK, Maiti T, Beachy PA", "reference": { "type": "PubMed", "id": "12192414", "url": "https://pubmed.ncbi.nlm.nih.gov/12192414" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22694-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit beta", "gene_name": "PRKACB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13635-1", "protein_name": "Protein patched homolog 1", "gene_name": "PTCH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JWF2-1", "protein_name": "Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas", "gene_name": "GNAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q61115-1", "protein_name": "Protein patched homolog 1", "gene_name": "Ptch1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD6-1", "protein_name": "Protein inturned", "gene_name": "INTU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit gamma", "gene_name": "PRKACG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2M1P5-1", "protein_name": "Kinesin-like protein KIF7", "gene_name": "KIF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6U8-1", "protein_name": "G protein-coupled receptor 161", "gene_name": "GPR161", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13861-1", "protein_name": "cAMP-dependent protein kinase type II-alpha regulatory subunit", "gene_name": "PRKAR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08151-1", "protein_name": "Transcription activator GLI1", "gene_name": "GLI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75386-1", "protein_name": "Tubby-related protein 3", "gene_name": "TULP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95622-1", "protein_name": "Adenylate cyclase type 5", "gene_name": "ADCY5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08828-1", "protein_name": "Adenylate cyclase type 1", "gene_name": "ADCY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40145-1", "protein_name": "Adenylate cyclase type 8", "gene_name": "ADCY8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFM4-1", "protein_name": "Adenylate cyclase type 4", "gene_name": "ADCY4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31321-1", "protein_name": "cAMP-dependent protein kinase type I-beta regulatory subunit", "gene_name": "PRKAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT04-1", "protein_name": "Protein fuzzy homolog", "gene_name": "FUZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10071-1", "protein_name": "Transcription activator GLI3", "gene_name": "GLI3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMX1-1", "protein_name": "Suppressor of fused homolog", "gene_name": "SUFU", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10070-5", "protein_name": "Transcription activator GLI2", "gene_name": "GLI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PN6-1", "protein_name": "Adenylate cyclase type 10", "gene_name": "ADCY10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51828-1", "protein_name": "Adenylate cyclase type 7", "gene_name": "ADCY7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43306-1", "protein_name": "Adenylate cyclase type 6", "gene_name": "ADCY6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08462-1", "protein_name": "Adenylate cyclase type 2", "gene_name": "ADCY2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12192414", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 57 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Ski is involved in transcriptional regulation by the repressor and full-length forms of Gli3.", "journal": "Genes & development", "date": "2002", "authors": "Dai P, Shinagawa T, Nomura T, Harada J, Kaul SC, Wadhwa R, Khan MM, Akimaru H, Sasaki H, Colmenares C, Ishii S", "reference": { "type": "PubMed", "id": "12435627", "url": "https://pubmed.ncbi.nlm.nih.gov/12435627" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22694-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit beta", "gene_name": "PRKACB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13635-1", "protein_name": "Protein patched homolog 1", "gene_name": "PTCH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JWF2-1", "protein_name": "Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas", "gene_name": "GNAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD6-1", "protein_name": "Protein inturned", "gene_name": "INTU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit gamma", "gene_name": "PRKACG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2M1P5-1", "protein_name": "Kinesin-like protein KIF7", "gene_name": "KIF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6U8-1", "protein_name": "G protein-coupled receptor 161", "gene_name": "GPR161", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13861-1", "protein_name": "cAMP-dependent protein kinase type II-alpha regulatory subunit", "gene_name": "PRKAR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08151-1", "protein_name": "Transcription activator GLI1", "gene_name": "GLI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75386-1", "protein_name": "Tubby-related protein 3", "gene_name": "TULP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95622-1", "protein_name": "Adenylate cyclase type 5", "gene_name": "ADCY5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08828-1", "protein_name": "Adenylate cyclase type 1", "gene_name": "ADCY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40145-1", "protein_name": "Adenylate cyclase type 8", "gene_name": "ADCY8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFM4-1", "protein_name": "Adenylate cyclase type 4", "gene_name": "ADCY4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31321-1", "protein_name": "cAMP-dependent protein kinase type I-beta regulatory subunit", "gene_name": "PRKAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT04-1", "protein_name": "Protein fuzzy homolog", "gene_name": "FUZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10071-1", "protein_name": "Transcription activator GLI3", "gene_name": "GLI3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMX1-1", "protein_name": "Suppressor of fused homolog", "gene_name": "SUFU", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10070-5", "protein_name": "Transcription activator GLI2", "gene_name": "GLI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PN6-1", "protein_name": "Adenylate cyclase type 10", "gene_name": "ADCY10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51828-1", "protein_name": "Adenylate cyclase type 7", "gene_name": "ADCY7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43306-1", "protein_name": "Adenylate cyclase type 6", "gene_name": "ADCY6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08462-1", "protein_name": "Adenylate cyclase type 2", "gene_name": "ADCY2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12435627", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 56 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The intraflagellar transport machinery of Chlamydomonas reinhardtii.", "journal": "Traffic (Copenhagen, Denmark)", "date": "2003", "authors": "Cole DG", "reference": { "type": "PubMed", "id": "12795688", "url": "https://pubmed.ncbi.nlm.nih.gov/12795688" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12795688", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 54 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Hedgehog signalling in the mouse requires intraflagellar transport proteins.", "journal": "Nature", "date": "2003", "authors": "Huangfu D, Liu A, Rakeman AS, Murcia NS, Niswander L, Anderson KV", "reference": { "type": "PubMed", "id": "14603322", "url": "https://pubmed.ncbi.nlm.nih.gov/14603322" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22694-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit beta", "gene_name": "PRKACB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13635-1", "protein_name": "Protein patched homolog 1", "gene_name": "PTCH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JWF2-1", "protein_name": "Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas", "gene_name": "GNAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6VH22-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "Ift172", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD6-1", "protein_name": "Protein inturned", "gene_name": "INTU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit gamma", "gene_name": "PRKACG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2M1P5-1", "protein_name": "Kinesin-like protein KIF7", "gene_name": "KIF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6U8-1", "protein_name": "G protein-coupled receptor 161", "gene_name": "GPR161", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13861-1", "protein_name": "cAMP-dependent protein kinase type II-alpha regulatory subunit", "gene_name": "PRKAR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08151-1", "protein_name": "Transcription activator GLI1", "gene_name": "GLI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75386-1", "protein_name": "Tubby-related protein 3", "gene_name": "TULP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95622-1", "protein_name": "Adenylate cyclase type 5", "gene_name": "ADCY5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08828-1", "protein_name": "Adenylate cyclase type 1", "gene_name": "ADCY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40145-1", "protein_name": "Adenylate cyclase type 8", "gene_name": "ADCY8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": 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"protein_name": "Transcription activator GLI3", "gene_name": "GLI3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMX1-1", "protein_name": "Suppressor of fused homolog", "gene_name": "SUFU", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10070-5", "protein_name": "Transcription activator GLI2", "gene_name": "GLI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PN6-1", "protein_name": "Adenylate cyclase type 10", "gene_name": "ADCY10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51828-1", "protein_name": "Adenylate cyclase type 7", "gene_name": "ADCY7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43306-1", "protein_name": "Adenylate cyclase type 6", "gene_name": "ADCY6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08462-1", "protein_name": "Adenylate cyclase type 2", "gene_name": "ADCY2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 1564, "end_pos": 1564, "sequence_org": "L", "sequence_mut": "P", "comment": "In wim; embryos arrest at 10.5-11.5 dpc and display an open neural tube in the head that lack the normal groove on the ventral midline. They lack ventral neural cell types and display other phenotypes characteristic of defects in Sonic hedgehog signaling.", "evidence": [ { "database": "UniProtKB", "id": "Q6VH22", "url": "https://www.uniprot.org/uniprotkb/Q6VH22" }, { "database": "PubMed", "id": "14603322", "url": "https://pubmed.ncbi.nlm.nih.gov/14603322" } ], "uniprot_canonical_ac": "Q6VH22-1" } ], "record_id": "pubmed.14603322", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 57 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Expression of the PTCH1 tumor suppressor gene is regulated by alternative promoters and a single functional Gli-binding site.", "journal": "Gene", "date": "2004", "authors": "Agren M, Kogerman P, Kleman MI, Wessling M, Toftgard R", "reference": { "type": "PubMed", "id": "15087129", "url": "https://pubmed.ncbi.nlm.nih.gov/15087129" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22694-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit beta", "gene_name": "PRKACB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13635-1", "protein_name": "Protein patched homolog 1", "gene_name": "PTCH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JWF2-1", "protein_name": "Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas", "gene_name": "GNAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": 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"O75386-1", "protein_name": "Tubby-related protein 3", "gene_name": "TULP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95622-1", "protein_name": "Adenylate cyclase type 5", "gene_name": "ADCY5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08828-1", "protein_name": "Adenylate cyclase type 1", "gene_name": "ADCY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40145-1", "protein_name": "Adenylate cyclase type 8", "gene_name": "ADCY8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFM4-1", "protein_name": "Adenylate cyclase type 4", "gene_name": "ADCY4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta 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"TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT04-1", "protein_name": "Protein fuzzy homolog", "gene_name": "FUZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10071-1", "protein_name": "Transcription activator GLI3", "gene_name": "GLI3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMX1-1", "protein_name": "Suppressor of fused homolog", "gene_name": "SUFU", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"Human" }, { "uniprot_canonical_ac": "Q08462-1", "protein_name": "Adenylate cyclase type 2", "gene_name": "ADCY2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15087129", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 56 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", 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"uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", 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"tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15231740", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 54 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, 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"Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain 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transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15269286", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 54 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Two anterograde intraflagellar transport motors cooperate to build sensory cilia on C. elegans neurons.", "journal": "Nature cell biology", "date": "2004", "authors": "Snow JJ, Ou G, Gunnarson AL, Walker MR, Zhou HM, Brust-Mascher I, Scholey JM", "reference": { "type": "PubMed", "id": "15489852", "url": "https://pubmed.ncbi.nlm.nih.gov/15489852" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated 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"uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": 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complexes share a common molecular architecture.", "journal": "PLoS biology", "date": "2004", "authors": "Devos D, Dokudovskaya S, Alber F, Williams R, Chait BT, Sali A, Rout MP", "reference": { "type": "PubMed", "id": "15523559", "url": "https://pubmed.ncbi.nlm.nih.gov/15523559" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": 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2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15523559", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 54 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mouse intraflagellar transport proteins regulate both the activator and repressor functions of Gli transcription factors.", "journal": "Development (Cambridge, England)", "date": "2005", "authors": "Liu A, Wang B, Niswander LA", "reference": { "type": "PubMed", "id": "15930098", "url": "https://pubmed.ncbi.nlm.nih.gov/15930098" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22694-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit beta", "gene_name": "PRKACB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13635-1", "protein_name": "Protein patched homolog 1", "gene_name": "PTCH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JWF2-1", "protein_name": "Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas", "gene_name": "GNAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD6-1", "protein_name": "Protein inturned", "gene_name": "INTU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit gamma", "gene_name": "PRKACG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2M1P5-1", "protein_name": "Kinesin-like protein KIF7", "gene_name": "KIF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6U8-1", "protein_name": "G protein-coupled receptor 161", "gene_name": "GPR161", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13861-1", "protein_name": "cAMP-dependent protein kinase type II-alpha regulatory subunit", "gene_name": "PRKAR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08151-1", "protein_name": "Transcription activator GLI1", "gene_name": "GLI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75386-1", "protein_name": "Tubby-related protein 3", "gene_name": "TULP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95622-1", "protein_name": "Adenylate cyclase type 5", "gene_name": "ADCY5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08828-1", "protein_name": "Adenylate cyclase type 1", "gene_name": "ADCY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40145-1", "protein_name": "Adenylate cyclase type 8", "gene_name": "ADCY8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFM4-1", "protein_name": "Adenylate cyclase type 4", "gene_name": "ADCY4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31321-1", "protein_name": "cAMP-dependent protein kinase type I-beta regulatory subunit", "gene_name": "PRKAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT04-1", "protein_name": "Protein fuzzy homolog", "gene_name": "FUZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10071-1", "protein_name": "Transcription activator GLI3", "gene_name": "GLI3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMX1-1", "protein_name": "Suppressor of fused homolog", "gene_name": "SUFU", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10070-5", "protein_name": "Transcription activator GLI2", "gene_name": "GLI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PN6-1", "protein_name": "Adenylate cyclase type 10", "gene_name": "ADCY10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51828-1", "protein_name": "Adenylate cyclase type 7", "gene_name": "ADCY7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43306-1", "protein_name": "Adenylate cyclase type 6", "gene_name": "ADCY6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08462-1", "protein_name": "Adenylate cyclase type 2", "gene_name": "ADCY2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15930098", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 56 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of the intraflagellar transport complex B core: direct interaction of the IFT81 and IFT74/72 subunits.", "journal": "The Journal of biological chemistry", "date": "2005", "authors": "Lucker BF, Behal RH, Qin H, Siron LC, Taggart WD, Rosenbaum JL, Cole DG", "reference": { "type": "PubMed", "id": "15955805", "url": "https://pubmed.ncbi.nlm.nih.gov/15955805" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15955805", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 54 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Functional coordination of intraflagellar transport motors.", "journal": "Nature", "date": "2005", "authors": "Ou G, Blacque OE, Snow JJ, Leroux MR, Scholey JM", "reference": { "type": "PubMed", "id": "16049494", "url": "https://pubmed.ncbi.nlm.nih.gov/16049494" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", 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"TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": 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"type": "PubMed", "id": "16229832", "url": "https://pubmed.ncbi.nlm.nih.gov/16229832" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22694-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit beta", "gene_name": "PRKACB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13635-1", "protein_name": "Protein patched homolog 1", "gene_name": "PTCH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JWF2-1", "protein_name": "Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas", "gene_name": "GNAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD6-1", "protein_name": "Protein 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"uniprot_canonical_ac": "P13861-1", "protein_name": "cAMP-dependent protein kinase type II-alpha regulatory subunit", "gene_name": "PRKAR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08151-1", "protein_name": "Transcription activator GLI1", "gene_name": "GLI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75386-1", "protein_name": "Tubby-related protein 3", "gene_name": "TULP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95622-1", "protein_name": "Adenylate cyclase type 5", "gene_name": "ADCY5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08828-1", "protein_name": "Adenylate cyclase type 1", "gene_name": "ADCY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40145-1", "protein_name": "Adenylate cyclase type 8", "gene_name": "ADCY8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFM4-1", "protein_name": "Adenylate cyclase type 4", "gene_name": "ADCY4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31321-1", "protein_name": "cAMP-dependent protein kinase type I-beta regulatory subunit", "gene_name": "PRKAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q45VK7-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "Dync2h1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT04-1", "protein_name": "Protein fuzzy homolog", "gene_name": "FUZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10071-1", "protein_name": "Transcription activator GLI3", "gene_name": "GLI3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMX1-1", "protein_name": "Suppressor of fused homolog", "gene_name": "SUFU", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10070-5", "protein_name": "Transcription activator GLI2", "gene_name": "GLI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PN6-1", "protein_name": "Adenylate cyclase type 10", "gene_name": "ADCY10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51828-1", "protein_name": "Adenylate cyclase type 7", "gene_name": "ADCY7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43306-1", "protein_name": "Adenylate cyclase type 6", "gene_name": "ADCY6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08462-1", "protein_name": "Adenylate cyclase type 2", "gene_name": "ADCY2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": 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"uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75386-1", "protein_name": "Tubby-related protein 3", "gene_name": "TULP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95622-1", "protein_name": "Adenylate cyclase type 5", "gene_name": "ADCY5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08828-1", "protein_name": "Adenylate cyclase type 1", "gene_name": "ADCY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40145-1", "protein_name": "Adenylate cyclase type 8", "gene_name": "ADCY8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFM4-1", "protein_name": "Adenylate cyclase type 4", "gene_name": "ADCY4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase 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}, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10070-5", "protein_name": "Transcription activator GLI2", "gene_name": "GLI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PN6-1", "protein_name": "Adenylate cyclase type 10", "gene_name": "ADCY10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51828-1", "protein_name": "Adenylate 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}, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Oral-facial-digital type I protein is required for primary cilia formation and left-right axis specification.", "journal": "Nature genetics", "date": "2006", "authors": "Ferrante MI, Zullo A, Barra A, Bimonte S, Messaddeq N, Studer M, Dolle P, Franco B", "reference": { "type": "PubMed", "id": "16311594", "url": "https://pubmed.ncbi.nlm.nih.gov/16311594" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22694-1", "protein_name": "cAMP-dependent protein kinase catalytic 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"tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD6-1", "protein_name": "Protein inturned", "gene_name": "INTU", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q80Z25-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "Ofd1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P22612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit gamma", "gene_name": "PRKACG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2M1P5-1", "protein_name": "Kinesin-like protein KIF7", "gene_name": "KIF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6U8-1", "protein_name": "G protein-coupled receptor 161", "gene_name": "GPR161", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13861-1", "protein_name": "cAMP-dependent protein kinase type II-alpha regulatory subunit", "gene_name": "PRKAR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08151-1", "protein_name": "Transcription activator GLI1", "gene_name": "GLI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75386-1", "protein_name": "Tubby-related protein 3", "gene_name": "TULP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95622-1", "protein_name": "Adenylate cyclase type 5", "gene_name": "ADCY5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08828-1", "protein_name": "Adenylate cyclase type 1", "gene_name": "ADCY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40145-1", "protein_name": "Adenylate cyclase type 8", "gene_name": "ADCY8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": "Human" }, { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Signaling from Smo to Ci/Gli: conservation and divergence of Hedgehog pathways from Drosophila to vertebrates.", "journal": "Development (Cambridge, England)", "date": "2006", "authors": "Huangfu D, Anderson KV", "reference": { "type": "PubMed", "id": "16339192", "url": "https://pubmed.ncbi.nlm.nih.gov/16339192" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", 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"uniprot_canonical_ac": "P10071-1", "protein_name": "Transcription activator GLI3", "gene_name": "GLI3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMX1-1", "protein_name": "Suppressor of fused homolog", "gene_name": "SUFU", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10070-5", "protein_name": "Transcription activator GLI2", "gene_name": "GLI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PN6-1", "protein_name": "Adenylate cyclase type 10", "gene_name": "ADCY10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51828-1", "protein_name": "Adenylate cyclase type 7", "gene_name": "ADCY7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43306-1", "protein_name": "Adenylate cyclase type 6", "gene_name": "ADCY6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08462-1", "protein_name": "Adenylate cyclase type 2", "gene_name": "ADCY2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16339192", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 56 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "GLI3-dependent transcriptional repression of Gli1, Gli2 and kidney patterning genes disrupts renal morphogenesis.", "journal": "Development (Cambridge, England)", "date": "2006", "authors": "Hu MC, Mo R, Bhella S, Wilson CW, Chuang PT, Hui CC, Rosenblum ND", "reference": { "type": "PubMed", "id": "16396903", "url": "https://pubmed.ncbi.nlm.nih.gov/16396903" }, 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"tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD6-1", "protein_name": "Protein inturned", "gene_name": "INTU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22612-1", 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"uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFM4-1", "protein_name": "Adenylate cyclase type 4", "gene_name": "ADCY4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31321-1", "protein_name": "cAMP-dependent protein kinase type I-beta regulatory subunit", "gene_name": "PRKAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT04-1", 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"A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16435301", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", 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"gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16492809", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 54 } ], "sort_fields": [ 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Ciliogenesis defects in embryos lacking inturned or fuzzy function are associated with failure of planar cell polarity and Hedgehog signaling.", "journal": "Nature genetics", "date": "2006", "authors": "Park TJ, Haigo SL, Wallingford JB", "reference": { "type": "PubMed", "id": "16493421", "url": "https://pubmed.ncbi.nlm.nih.gov/16493421" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 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"Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD6-1", "protein_name": "Protein inturned", "gene_name": "INTU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit gamma", "gene_name": "PRKACG", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08151-1", "protein_name": "Transcription activator GLI1", "gene_name": "GLI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75386-1", "protein_name": "Tubby-related protein 3", "gene_name": "TULP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95622-1", "protein_name": "Adenylate cyclase type 5", "gene_name": "ADCY5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08828-1", "protein_name": "Adenylate cyclase type 1", "gene_name": "ADCY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40145-1", "protein_name": "Adenylate cyclase type 8", "gene_name": "ADCY8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFM4-1", "protein_name": "Adenylate cyclase type 4", "gene_name": "ADCY4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31321-1", "protein_name": "cAMP-dependent protein kinase type I-beta regulatory subunit", "gene_name": "PRKAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT04-1", "protein_name": "Protein fuzzy homolog", "gene_name": "FUZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10071-1", "protein_name": "Transcription activator 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"uniprot_canonical_ac": "Q96PN6-1", "protein_name": "Adenylate cyclase type 10", "gene_name": "ADCY10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51828-1", "protein_name": "Adenylate cyclase type 7", "gene_name": "ADCY7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43306-1", "protein_name": "Adenylate cyclase type 6", "gene_name": "ADCY6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08462-1", "protein_name": "Adenylate cyclase type 2", "gene_name": "ADCY2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16493421", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": 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"gene_name": "PRKACG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2M1P5-1", "protein_name": "Kinesin-like protein KIF7", "gene_name": "KIF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6U8-1", "protein_name": "G protein-coupled receptor 161", "gene_name": "GPR161", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13861-1", "protein_name": "cAMP-dependent protein kinase type II-alpha regulatory subunit", "gene_name": "PRKAR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08151-1", "protein_name": "Transcription activator GLI1", "gene_name": "GLI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75386-1", "protein_name": "Tubby-related protein 3", "gene_name": "TULP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95622-1", "protein_name": "Adenylate cyclase type 5", "gene_name": "ADCY5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08828-1", "protein_name": "Adenylate cyclase type 1", "gene_name": "ADCY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40145-1", "protein_name": "Adenylate cyclase type 8", "gene_name": "ADCY8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFM4-1", "protein_name": "Adenylate cyclase type 4", "gene_name": "ADCY4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56726-1", "protein_name": "Protein smoothened", "gene_name": "Smo", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31321-1", "protein_name": "cAMP-dependent protein kinase type I-beta regulatory subunit", "gene_name": "PRKAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT04-1", "protein_name": "Protein fuzzy homolog", "gene_name": "FUZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10071-1", "protein_name": "Transcription activator GLI3", "gene_name": "GLI3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMX1-1", "protein_name": "Suppressor of fused homolog", "gene_name": "SUFU", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10070-5", "protein_name": "Transcription activator GLI2", "gene_name": "GLI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PN6-1", "protein_name": "Adenylate cyclase type 10", "gene_name": "ADCY10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51828-1", "protein_name": "Adenylate cyclase type 7", "gene_name": "ADCY7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43306-1", "protein_name": "Adenylate cyclase type 6", "gene_name": "ADCY6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08462-1", "protein_name": "Adenylate cyclase type 2", "gene_name": "ADCY2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16707575", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 57 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The intraflagellar transport protein IFT20 is associated with the Golgi complex and is required for cilia assembly.", "journal": "Molecular biology of the cell", "date": "2006", "authors": "Follit JA, Tuft RA, Fogarty KE, Pazour GJ", "reference": { "type": "PubMed", "id": "16775004", "url": "https://pubmed.ncbi.nlm.nih.gov/16775004" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "D3ZSV1-1", "protein_name": "Intraflagellar transport 20", "gene_name": "Ift20", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q61025-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "Ift20", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BKE9-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "Ift74", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16775004", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 57 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Ciliary targeting of olfactory CNG channels requires the CNGB1b subunit and the kinesin-2 motor protein, KIF17.", "journal": "Current biology : CB", "date": "2006", "authors": "Jenkins PM, Hurd TW, Zhang L, McEwen DP, Brown RL, Margolis B, Verhey KJ, Martens JR", "reference": { "type": "PubMed", "id": "16782012", "url": "https://pubmed.ncbi.nlm.nih.gov/16782012" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULH1-1", "protein_name": "Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1", "gene_name": "ASAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00471-1", "protein_name": "Exocyst complex component 5", "gene_name": "EXOC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KP1-1", "protein_name": "Exocyst complex component 2", "gene_name": "EXOC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13563-1", "protein_name": "Polycystin-2", "gene_name": "PKD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62491-1", "protein_name": "Ras-related protein Rab-11A", "gene_name": "RAB11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IV77-1", "protein_name": "Cyclic nucleotide-gated channel alpha-4", "gene_name": "CNGA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08100-1", "protein_name": "Rhodopsin", "gene_name": "RHO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75154-1", "protein_name": "Rab11 family-interacting protein 3", "gene_name": "RAB11FIP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14028-1", "protein_name": "Cyclic nucleotide-gated channel beta-1", "gene_name": "CNGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61006-1", "protein_name": "Ras-related protein Rab-8A", "gene_name": "RAB8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18085-1", "protein_name": "ADP-ribosylation factor 4", "gene_name": "ARF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92538-4", "protein_name": "Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1", "gene_name": "GBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16280-1", "protein_name": "Cyclic nucleotide-gated channel alpha-2", "gene_name": "CNGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IYI6-1", "protein_name": "Exocyst complex component 8", "gene_name": "EXOC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A65-1", "protein_name": "Exocyst complex component 4", "gene_name": "EXOC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P98161-1", "protein_name": "Polycystin-1", "gene_name": "PKD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60645-1", "protein_name": "Exocyst complex component 3", "gene_name": "EXOC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPT5-3", "protein_name": "Exocyst complex component 7", "gene_name": "EXOC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NV70-1", "protein_name": "Exocyst complex component 1", "gene_name": "EXOC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TAG9-1", "protein_name": "Exocyst complex component 6", "gene_name": "EXOC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16782012", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 75 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Hippi is essential for node cilia assembly and Sonic hedgehog signaling.", "journal": "Developmental biology", "date": "2006", "authors": "Houde C, Dickinson RJ, Houtzager VM, Cullum R, Montpetit R, Metzler M, Simpson EM, Roy S, Hayden MR, Hoodless PA, Nicholson DW", "reference": { "type": "PubMed", "id": "17027958", "url": "https://pubmed.ncbi.nlm.nih.gov/17027958" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22694-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit beta", "gene_name": "PRKACB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13635-1", "protein_name": "Protein patched homolog 1", "gene_name": "PTCH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JWF2-1", "protein_name": "Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas", "gene_name": "GNAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD6-1", "protein_name": "Protein inturned", "gene_name": "INTU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit gamma", "gene_name": "PRKACG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2M1P5-1", "protein_name": "Kinesin-like protein KIF7", "gene_name": "KIF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6U8-1", "protein_name": "G protein-coupled receptor 161", "gene_name": "GPR161", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13861-1", "protein_name": "cAMP-dependent protein kinase type II-alpha regulatory subunit", "gene_name": "PRKAR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08151-1", "protein_name": "Transcription activator GLI1", "gene_name": "GLI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75386-1", "protein_name": "Tubby-related protein 3", "gene_name": "TULP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95622-1", "protein_name": "Adenylate cyclase type 5", "gene_name": "ADCY5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08828-1", "protein_name": "Adenylate cyclase type 1", "gene_name": "ADCY1", 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"PRKAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8BXG3-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "Ift57", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT04-1", "protein_name": "Protein fuzzy homolog", "gene_name": "FUZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10071-1", "protein_name": "Transcription activator GLI3", "gene_name": "GLI3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMX1-1", "protein_name": "Suppressor of fused homolog", "gene_name": "SUFU", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10070-5", "protein_name": "Transcription activator GLI2", "gene_name": "GLI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PN6-1", "protein_name": "Adenylate cyclase type 10", "gene_name": "ADCY10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51828-1", "protein_name": "Adenylate cyclase type 7", "gene_name": "ADCY7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43306-1", "protein_name": "Adenylate cyclase type 6", "gene_name": "ADCY6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08462-1", "protein_name": "Adenylate cyclase type 2", "gene_name": "ADCY2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17027958", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 57 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Oxysterols are novel activators of the hedgehog signaling pathway in pluripotent mesenchymal cells.", "journal": "The Journal of biological chemistry", "date": "2007", "authors": "Dwyer JR, Sever N, Carlson M, Nelson SF, Beachy PA, Parhami F", "reference": { "type": "PubMed", "id": "17200122", "url": "https://pubmed.ncbi.nlm.nih.gov/17200122" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22694-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit beta", "gene_name": "PRKACB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13635-1", "protein_name": "Protein patched homolog 1", "gene_name": "PTCH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JWF2-1", "protein_name": "Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas", "gene_name": "GNAS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD6-1", "protein_name": "Protein inturned", "gene_name": "INTU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit gamma", "gene_name": "PRKACG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2M1P5-1", "protein_name": "Kinesin-like protein KIF7", "gene_name": "KIF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CZ1-1", "protein_name": "Protein fantom", "gene_name": "RPGRIP1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6U8-1", "protein_name": "G protein-coupled receptor 161", "gene_name": "GPR161", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13861-1", "protein_name": "cAMP-dependent protein kinase type II-alpha regulatory subunit", "gene_name": "PRKAR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08151-1", "protein_name": "Transcription activator GLI1", "gene_name": "GLI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17612-1", "protein_name": "cAMP-dependent protein kinase catalytic subunit alpha", "gene_name": "PRKACA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75386-1", "protein_name": "Tubby-related protein 3", "gene_name": "TULP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95622-1", "protein_name": "Adenylate cyclase type 5", "gene_name": "ADCY5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08828-1", "protein_name": "Adenylate cyclase type 1", "gene_name": "ADCY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40145-1", "protein_name": "Adenylate cyclase type 8", "gene_name": "ADCY8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60266-1", "protein_name": "Adenylate cyclase type 3", "gene_name": "ADCY3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFM4-1", "protein_name": "Adenylate cyclase type 4", "gene_name": "ADCY4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10644-1", "protein_name": "cAMP-dependent protein kinase type I-alpha regulatory subunit", "gene_name": "PRKAR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31323-1", "protein_name": "cAMP-dependent protein kinase type II-beta regulatory subunit", "gene_name": "PRKAR2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56726-1", "protein_name": "Protein smoothened", "gene_name": "Smo", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31321-1", "protein_name": "cAMP-dependent protein kinase type I-beta regulatory subunit", "gene_name": "PRKAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75665-1", "protein_name": "Centriole and centriolar satellite protein OFD1", "gene_name": "OFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT04-1", "protein_name": "Protein fuzzy homolog", "gene_name": "FUZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10071-1", "protein_name": "Transcription activator GLI3", "gene_name": "GLI3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMX1-1", "protein_name": "Suppressor of fused homolog", "gene_name": "SUFU", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXB0-1", "protein_name": "Tectonic-like complex member MKS1", "gene_name": "MKS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10070-5", "protein_name": "Transcription activator GLI2", "gene_name": "GLI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60503-1", "protein_name": "Adenylate cyclase type 9", "gene_name": "ADCY9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PN6-1", "protein_name": "Adenylate cyclase type 10", "gene_name": "ADCY10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51828-1", "protein_name": "Adenylate cyclase type 7", "gene_name": "ADCY7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43306-1", "protein_name": "Adenylate cyclase type 6", "gene_name": "ADCY6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08462-1", "protein_name": "Adenylate cyclase type 2", "gene_name": "ADCY2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17200122", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 57 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Functional analysis of an individual IFT protein: IFT46 is required for transport of outer dynein arms into flagella.", "journal": "The Journal of cell biology", "date": "2007", "authors": "Hou Y, Qin H, Follit JA, Pazour GJ, Rosenbaum JL, Witman GB", "reference": { "type": "PubMed", "id": "17312020", "url": "https://pubmed.ncbi.nlm.nih.gov/17312020" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q61371-1", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "Ift88", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9DB07-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "Ift46", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": "Tetratricopeptide repeat protein 21B", "gene_name": "TTC21B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWB7-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "IFT57", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13099-2", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "IFT88", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYA0-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "IFT81", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N7M0-1", "protein_name": "Dynein light chain Tctex-type 5", "gene_name": "DYNLT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZS6-1", "protein_name": "Dynein light chain Tctex-type protein 2", "gene_name": "DYNLT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15643-1", "protein_name": "Thyroid receptor-interacting protein 11", "gene_name": "TRIP11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ3-1", "protein_name": "WD repeat-containing protein 19", "gene_name": "WDR19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY31-1", "protein_name": "Intraflagellar transport protein 20 homolog", "gene_name": "IFT20", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2L0", "url": "https://www.uniprot.org/uniprotkb/Q9P2L0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17312020", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 56 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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"glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Sensory ciliogenesis in Caenorhabditis elegans: assignment of IFT components into distinct modules based on transport and phenotypic profiles.", "journal": "Molecular biology of the cell", "date": "2007", "authors": "Ou G, Koga M, Blacque OE, Murayama T, Ohshima Y, Schafer JC, Li C, Yoder BK, Leroux MR, Scholey JM", "reference": { "type": "PubMed", "id": "17314406", "url": "https://pubmed.ncbi.nlm.nih.gov/17314406" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2L0-1", "protein_name": "WD repeat-containing protein 35", "gene_name": "WDR35", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15066-1", "protein_name": "Kinesin-like protein KIF3B", "gene_name": "KIF3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BW83-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "IFT27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RY7-1", "protein_name": "Intraflagellar transport protein 140 homolog", "gene_name": "IFT140", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBG6-1", "protein_name": "Intraflagellar transport protein 122 homolog", "gene_name": "IFT122", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UG01-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "IFT172", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2H3-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "IFT80", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVS4-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 1", "gene_name": "DYNC2I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDR0-1", "protein_name": "TRAF3-interacting protein 1", "gene_name": "TRAF3IP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AJ1-1", "protein_name": "Clusterin-associated protein 1", "gene_name": "CLUAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCX1-1", "protein_name": "Cytoplasmic dynein 2 light intermediate chain 1", "gene_name": "DYNC2LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP97-1", "protein_name": "Dynein light chain roadblock-type 1", "gene_name": "DYNLRB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14782-1", "protein_name": "Kinesin-like protein KIF3C", "gene_name": "KIF3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92845-1", "protein_name": "Kinesin-associated protein 3", "gene_name": "KIFAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0AVF1-1", "protein_name": "Intraflagellar transport protein 56", "gene_name": "IFT56", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCM8-1", "protein_name": "Cytoplasmic dynein 2 heavy chain 1", "gene_name": "DYNC2H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WW35-1", "protein_name": "Dynein light chain Tctex-type protein 2B", "gene_name": "DYNLT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EX3-1", "protein_name": "Cytoplasmic dynein 2 intermediate chain 2", "gene_name": "DYNC2I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92973-1", "protein_name": "Transportin-1", "gene_name": "TNPO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WT1-1", "protein_name": "Intraflagellar transport protein 70A", "gene_name": "IFT70A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4P2-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "IFT70B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TF09-1", "protein_name": "Dynein light chain roadblock-type 2", "gene_name": "DYNLRB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LB3-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "IFT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2E2-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "KIF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC8-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "IFT46", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FT9-1", "protein_name": "Intraflagellar transport protein 43 homolog", "gene_name": "IFT43", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7X7-1", "protein_name": "Intraflagellar transport protein 22 homolog", "gene_name": "IFT22", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y547-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "IFT25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y366-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "IFT52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4L5-1", "protein_name": 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