[ { "title": "LILRB4 signalling in leukaemia cells mediates T cell suppression and tumour infiltration.", "journal": "Nature", "date": "2018", "authors": "Deng M, Gui X, Kim J, Xie L, Chen W, Li Z, He L, Chen Y, Chen H, Luo W, Lu Z, Xie J, Churchill H, Xu Y, Zhou Z, Wu G, Yu C, John S, Hirayasu K, Nguyen N, Liu X, Huang F, Li L, Deng H, Tang H, Sadek AH, Zhang L, Huang T, Zou Y, Chen B, Zhu H, Arase H, Xia N, Jiang Y, Collins R, You MJ, Homsi J, Unni N, Lewis C, Chen GQ, Fu YX, Liao XC, An Z, Zheng J, Zhang N, Zhang CC", "reference": { "type": "PubMed", "id": "30333625", "url": "https://pubmed.ncbi.nlm.nih.gov/30333625" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P02649-1", "protein_name": "Apolipoprotein E", "gene_name": "APOE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NHJ6-1", "protein_name": "Leukocyte immunoglobulin-like receptor subfamily B member 4", "gene_name": "LILRB4", "tax_name": "Human" } ], "species": [ { "name": "Homo 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Biophys. Res. Commun.", "date": "1986", "authors": "Cardin A D, Hirose N, Blankenship D T, Jackson R L, Harmony J A, Sparrow D A, Sparrow J T", "reference": { "type": "PubMed", "id": "3947350", "url": "https://pubmed.ncbi.nlm.nih.gov/3947350" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P02649-1", "protein_name": "Apolipoprotein E", "gene_name": "APOE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P02649", "url": "https://www.uniprot.org/uniprotkb/P02649" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.3947350", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Synthesis, intracellular processing, and signal peptide of human apolipoprotein E.", "journal": "J. Biol. Chem.", "date": "1984", "authors": "Zannis V I, McPherson J, Goldberger G, Karathanasis S K, Breslow J L", "reference": { "type": "PubMed", "id": "6325438", "url": "https://pubmed.ncbi.nlm.nih.gov/6325438" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P02649-1", "protein_name": "Apolipoprotein E", "gene_name": "APOE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P02649", "url": "https://www.uniprot.org/uniprotkb/P02649" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.6325438", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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Chem.", "date": "1993", "authors": "Westerlund J A, Weisgraber K H", "reference": { "type": "PubMed", "id": "8340399", "url": "https://pubmed.ncbi.nlm.nih.gov/8340399" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P02649-1", "protein_name": "Apolipoprotein E", "gene_name": "APOE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P02649", "url": "https://www.uniprot.org/uniprotkb/P02649" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8340399", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": 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neurology", "date": "2008", "authors": "Clement E, Mercuri E, Godfrey C, Smith J, Robb S, Kinali M, Straub V, Bushby K, Manzur A, Talim B, Cowan F, Quinlivan R, Klein A, Longman C, McWilliam R, Topaloglu H, Mein R, Abbs S, North K, Barkovich AJ, Rutherford M, Muntoni F", "reference": { "type": "PubMed", "id": "19067344", "url": "https://pubmed.ncbi.nlm.nih.gov/19067344" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O43505-1", "protein_name": "Beta-1,4-glucuronyltransferase 1", "gene_name": "B4GAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WZA1-1", "protein_name": "Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1", "gene_name": "POMGNT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95461-1", "protein_name": "Xylosyl- and glucuronyltransferase LARGE1", "gene_name": "LARGE1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O43505", "url": 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"description": "" }, { "id": "MONDO:0009667", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0009667", "name": "muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A3", "description": "An autosomal recessive muscular dystrophy caused by mutations in the POMGNT1 gene. 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"MDDGB3", "description": "" }, { "id": "MONDO:0013155", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0013155", "name": "muscular dystrophy-dystroglycanopathy (congenital with intellectual disability), type B, 3", "description": "" }, { "id": "MONDO:0013155", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0013155", "name": "muscular dystrophy-dystroglycanopathy (congenital with mental retardation), type B, 3", "description": "" }, { "id": "MIM:613151", "resource": "MIM", "url": "https://www.omim.org/entry/613151", "name": "Muscular dystrophy-dystroglycanopathy congenital with impaired intellectual development B3", "description": "Muscular dystrophy-dystroglycanopathy congenital with impaired intellectual development B3" } ], "unlinked_id_list": [], "evidence": [ { "id": "613151", "database": "MIM", "url": "https://www.omim.org/entry/613151" }, { "id": "0112378", "database": "AGR", "url": 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"" }, { "id": "MONDO:0014929", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0014929", "name": "RP76", "description": "" }, { "id": "MONDO:0014929", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0014929", "name": "retinitis pigmentosa 76", "description": "" }, { "id": "MONDO:0014929", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0014929", "name": "retinitis pigmentosa 76; RP76", "description": "" }, { "id": "MONDO:0014929", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0014929", "name": "retinitis pigmentosa caused by mutation in POMGNT1", "description": "" }, { "id": "MONDO:0014929", "resource": "MONDO", "url": "https://monarchinitiative.org/disease/MONDO:0014929", "name": "retinitis pigmentosa type 76", "description": "" }, { "id": "MIM:617123", "resource": "MIM", "url": "https://www.omim.org/entry/617123", "name": "Retinitis pigmentosa 76", "description": "Retinitis pigmentosa 76" } ], "unlinked_id_list": [], "evidence": [ { "id": "617123", "database": "MIM", "url": "https://www.omim.org/entry/617123" }, { "id": "POMGNT1", "database": "Genomics England", "url": "https://panelapp.genomicsengland.co.uk/panels/25/gene/POMGNT1/#!details" }, { "id": "0061103", "database": "AGR", "url": "https://www.alliancegenome.org/disease/DOID:0061103" } ] } ], "keywords": [ "ebi", "somatic", "disease" ], "filter_code": "000100000000000000000.00000000000000.000000000001000000.00001.01.000.100", "uniprot_canonical_ac": "Q8WZA1-1" }, { "evidence": [ { "id": "rs267607210", "database": "dbSNP", "url": "https://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?type=rs&rs=rs267607210" }, { "id": "rs267607210", "database": "TOPMed", "url": "https://www.ncbi.nlm.nih.gov/snp/rs267607210#frequency_tab" }, { "id": "rs267607210", "database": "gnomAD", "url": "http://gnomad.broadinstitute.org/awesome?query=rs267607210" }, { "id": "19067344", "database": "PubMed", "url": 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Khim.", "date": "1994", "authors": "Zelenin S M, Mertvetsov N P", "reference": { "type": "PubMed", "id": "7908801", "url": "https://pubmed.ncbi.nlm.nih.gov/7908801" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P17735-1", "protein_name": "Tyrosine aminotransferase", "gene_name": "TAT", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P17735", "url": "https://www.uniprot.org/uniprotkb/P17735" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7908801", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] } ]