[ { "title": "Targeted gene walking by low stringency polymerase chain reaction: assignment of a putative human brain sodium channel gene (SCN3A) to chromosome 2q24-31.", "journal": "Proc. Natl. Acad. Sci. 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Mol. 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1 intermediate chain 1", "gene_name": "DYNC1I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08174-1", "protein_name": "Complement decay-accelerating factor", "gene_name": "CD55", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6G9-1", "protein_name": "Cytoplasmic dynein 1 light intermediate chain 1", "gene_name": "DYNC1LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing 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"uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q62839-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "Golga2", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02549-1", "protein_name": "Spectrin alpha chain, erythrocytic 1", "gene_name": "SPTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61163-1", "protein_name": "Alpha-centractin", "gene_name": "ACTR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18085-1", "protein_name": "ADP-ribosylation factor 4", "gene_name": "ARF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61204-1", "protein_name": "ADP-ribosylation factor 3", "gene_name": "ARF3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP61-1", "protein_name": "ADP-ribosylation factor GTPase-activating protein 3", "gene_name": "ARFGAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14579-1", "protein_name": "Coatomer subunit epsilon", "gene_name": "COPE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WTW3-1", "protein_name": "Conserved oligomeric Golgi complex subunit 1", "gene_name": "COG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92538-4", "protein_name": "Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1", "gene_name": "GBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JB2-1", "protein_name": "Conserved oligomeric Golgi complex subunit 3", "gene_name": "COG3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9E3-1", "protein_name": "Conserved oligomeric Golgi complex subunit 4", "gene_name": "COG4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P83436-1", "protein_name": "Conserved oligomeric Golgi complex subunit 7", "gene_name": "COG7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14746-1", "protein_name": "Conserved oligomeric Golgi complex subunit 2", "gene_name": "COG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBF2-1", "protein_name": "Coatomer subunit gamma-2", "gene_name": "COPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UP83-2", "protein_name": "Conserved oligomeric Golgi complex subunit 5", "gene_name": "COG5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y678-1", "protein_name": "Coatomer subunit gamma-1", "gene_name": "COPG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P299-1", "protein_name": "Coatomer subunit zeta-2", "gene_name": "COPZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43731-1", "protein_name": "ER lumen protein-retaining receptor 3", "gene_name": "KDELR3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24390-1", "protein_name": "ER lumen protein-retaining receptor 1", "gene_name": "KDELR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95249-1", "protein_name": "Golgi SNAP receptor complex member 1", "gene_name": "GOSR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13561-1", "protein_name": "Dynactin subunit 2", "gene_name": "DCTN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJW0-1", "protein_name": "Dynactin subunit 4", "gene_name": "DCTN4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTE1-1", "protein_name": "Dynactin subunit 5", "gene_name": "DCTN5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVK6-1", "protein_name": "Transmembrane emp24 domain-containing protein 9", "gene_name": "TMED9", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15020-1", "protein_name": "Spectrin beta chain, non-erythrocytic 2", "gene_name": "SPTBN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H853-1", "protein_name": "Tubulin-like protein alpha-4B", "gene_name": "TUBA4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3Q3-1", "protein_name": "Transmembrane emp24 domain-containing protein 3", "gene_name": "TMED3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3B3-1", "protein_name": "Transmembrane emp24 domain-containing protein 7", "gene_name": "TMED7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95067-1", "protein_name": "G2/mitotic-specific cyclin-B2", "gene_name": "CCNB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14635-1", "protein_name": "G2/mitotic-specific cyclin-B1", "gene_name": "CCNB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KX2-1", "protein_name": "F-actin-capping protein subunit alpha-3", "gene_name": "CAPZA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75935-1", "protein_name": "Dynactin subunit 3", "gene_name": "DCTN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43237-1", "protein_name": "Cytoplasmic dynein 1 light intermediate chain 2", "gene_name": "DYNC1LI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14204-1", "protein_name": "Cytoplasmic dynein 1 heavy chain 1", "gene_name": "DYNC1H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61019-1", "protein_name": "Ras-related protein Rab-2A", "gene_name": "RAB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13813-1", "protein_name": "Spectrin alpha chain, non-erythrocytic 1", "gene_name": "SPTAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01308-1", "protein_name": "Insulin", "gene_name": "INS", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NHL2-1", "protein_name": "Tubulin alpha chain-like 3", "gene_name": "TUBAL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY65-1", "protein_name": "Tubulin alpha-8 chain", "gene_name": "TUBA8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H8Y8-1", "protein_name": "Golgi reassembly-stacking protein 2", "gene_name": "GORASP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2G9-1", "protein_name": "Golgin-45", "gene_name": "BLZF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10679020", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 164 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Asymmetric requirements for a Rab GTPase and SNARE proteins in fusion of COPII vesicles with acceptor membranes.", "journal": "The Journal of cell biology", "date": "2000", "authors": "Cao X, Barlowe C", "reference": { "type": "PubMed", "id": "10747087", "url": "https://pubmed.ncbi.nlm.nih.gov/10747087" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15498-1", "protein_name": "Synaptobrevin homolog YKT6", "gene_name": "YKT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQW1-1", "protein_name": "Protein transport protein Sec31B", "gene_name": "SEC31B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00743-1", "protein_name": "Serine/threonine-protein phosphatase 6 catalytic subunit", "gene_name": "PPP6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9R7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 3", "gene_name": "PPP6R3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H115-1", "protein_name": "Beta-soluble NSF attachment protein", "gene_name": "NAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15514-1", "protein_name": "Amphiregulin", "gene_name": "AREG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49257-1", "protein_name": "Protein ERGIC-53", "gene_name": "LMAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42261-1", "protein_name": "Glutamate receptor 1", "gene_name": "GRIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR2-1", "protein_name": "Cathepsin Z", "gene_name": "CTSZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95406-1", "protein_name": "Protein cornichon homolog 1", "gene_name": "CNIH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", "protein_name": "Protein SEC13 homolog", "gene_name": "SEC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75396-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "SEC22B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JE7-1", "protein_name": "Protein transport protein Sec16B", "gene_name": "SEC16B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95487-1", "protein_name": "Protein transport protein Sec24B", "gene_name": "SEC24B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56962-1", "protein_name": "Syntaxin-17", "gene_name": "STX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing protein 10", "gene_name": "TMED10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14653-1", "protein_name": "Golgi SNAP receptor complex member 2", "gene_name": "GOSR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10747087", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 69 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mammalian homologues of yeast sec31p. An ubiquitously expressed form is localized to endoplasmic reticulum (ER) exit sites and is essential for ER-Golgi transport.", "journal": "The Journal of biological chemistry", "date": "2000-05-05", "authors": "Tang B L, Zhang T, Low D Y, Wong E T, Horstmann H, Hong W", "reference": { "type": "PubMed", "id": "10788476", "url": "https://pubmed.ncbi.nlm.nih.gov/10788476" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15498-1", "protein_name": "Synaptobrevin homolog YKT6", "gene_name": "YKT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQW1-1", "protein_name": "Protein transport protein Sec31B", "gene_name": "SEC31B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00743-1", "protein_name": "Serine/threonine-protein phosphatase 6 catalytic subunit", "gene_name": "PPP6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9R7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 3", "gene_name": "PPP6R3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H115-1", "protein_name": "Beta-soluble NSF attachment protein", "gene_name": "NAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15514-1", "protein_name": "Amphiregulin", "gene_name": "AREG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Z2Q1-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "Sec31a", "tax_name": "Rat" }, { "uniprot_canonical_ac": "P49257-1", "protein_name": "Protein ERGIC-53", "gene_name": "LMAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42261-1", "protein_name": "Glutamate receptor 1", "gene_name": "GRIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR2-1", "protein_name": "Cathepsin Z", "gene_name": "CTSZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95406-1", "protein_name": "Protein cornichon homolog 1", "gene_name": "CNIH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", "protein_name": "Protein SEC13 homolog", "gene_name": "SEC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75396-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "SEC22B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JE7-1", "protein_name": "Protein transport protein Sec16B", "gene_name": "SEC16B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95487-1", "protein_name": "Protein transport protein Sec24B", "gene_name": "SEC24B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56962-1", "protein_name": "Syntaxin-17", "gene_name": "STX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing protein 10", "gene_name": "TMED10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14653-1", "protein_name": "Golgi SNAP receptor complex member 2", "gene_name": "GOSR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5XFW8-1", "protein_name": "Protein SEC13 homolog", "gene_name": "Sec13", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10788476", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 71 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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"protein_name": "HLA class I histocompatibility antigen, alpha chain G", "gene_name": "HLA-G", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95406-1", "protein_name": "Protein cornichon homolog 1", "gene_name": "CNIH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99570-1", "protein_name": "Phosphoinositide 3-kinase regulatory subunit 4", "gene_name": "PIK3R4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", "protein_name": "Protein SEC13 homolog", "gene_name": "SEC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75396-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "SEC22B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JE7-1", "protein_name": "Protein transport protein Sec16B", "gene_name": "SEC16B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95487-1", "protein_name": "Protein transport protein Sec24B", "gene_name": "SEC24B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56962-1", "protein_name": "Syntaxin-17", "gene_name": "STX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing protein 10", "gene_name": "TMED10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14653-1", "protein_name": "Golgi SNAP receptor complex member 2", "gene_name": "GOSR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10321-1", "protein_name": "HLA class I histocompatibility antigen, C alpha chain", "gene_name": "HLA-C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04439-1", "protein_name": "HLA class I histocompatibility antigen, A alpha chain", "gene_name": "HLA-A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27824-1", "protein_name": "Calnexin", "gene_name": "CANX", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15533-1", "protein_name": "Tapasin", "gene_name": "TAPBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61769-1", "protein_name": "Beta-2-microglobulin", "gene_name": "B2M", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEB9-1", "protein_name": "Phosphatidylinositol 3-kinase catalytic subunit type 3", "gene_name": "PIK3C3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51572-1", "protein_name": "B-cell receptor-associated protein 31", "gene_name": "BCAP31", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZNE5-1", "protein_name": "Beclin 1-associated autophagy-related key regulator", "gene_name": "ATG14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q03518-1", "protein_name": "Antigen peptide transporter 1", "gene_name": "TAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01893-1", "protein_name": "Putative HLA class I histocompatibility antigen, alpha chain H", "gene_name": "HLA-H", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P179-1", "protein_name": "Endoplasmic reticulum aminopeptidase 2", "gene_name": "ERAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZ08-1", "protein_name": "Endoplasmic reticulum aminopeptidase 1", "gene_name": "ERAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30101-1", "protein_name": "Protein disulfide-isomerase A3", "gene_name": "PDIA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27797-1", "protein_name": "Calreticulin", "gene_name": "CALR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01889-1", "protein_name": "HLA class I histocompatibility antigen, B alpha chain", "gene_name": "HLA-B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10825291", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 91 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", 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}, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Rab1 recruitment of p115 into a cis-SNARE complex: programming budding COPII vesicles for fusion.", "journal": "Science (New York, N.Y.)", "date": "2000", "authors": "Allan BB, Moyer BD, Balch WE", "reference": { "type": "PubMed", "id": "10903204", "url": "https://pubmed.ncbi.nlm.nih.gov/10903204" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15498-1", "protein_name": "Synaptobrevin homolog YKT6", "gene_name": "YKT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQW1-1", "protein_name": "Protein transport protein Sec31B", "gene_name": "SEC31B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12893-1", "protein_name": "Transmembrane protein 115", "gene_name": "TMEM115", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00743-1", "protein_name": "Serine/threonine-protein phosphatase 6 catalytic subunit", "gene_name": "PPP6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9R7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 3", "gene_name": "PPP6R3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H115-1", "protein_name": "Beta-soluble NSF attachment protein", "gene_name": "NAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14203-1", "protein_name": "Dynactin subunit 1", "gene_name": "DCTN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16157-1", "protein_name": "Ankyrin-1", "gene_name": "ANK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15514-1", "protein_name": "Amphiregulin", "gene_name": "AREG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01484-4", "protein_name": "Ankyrin-2", "gene_name": "ANK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12955-3", "protein_name": "Ankyrin-3", "gene_name": "ANK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6H7-1", "protein_name": "ADP-ribosylation factor GTPase-activating protein 2", "gene_name": "ARFGAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84085-1", "protein_name": "ADP-ribosylation factor 5", "gene_name": "ARF5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84077-1", "protein_name": "ADP-ribosylation factor 1", "gene_name": "ARF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6T3-1", "protein_name": "ADP-ribosylation factor GTPase-activating protein 1", "gene_name": "ARFGAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZ32-1", "protein_name": "Actin-related protein 10", "gene_name": "ACTR10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PEY2-1", "protein_name": "Tubulin alpha-3E chain", "gene_name": "TUBA3E", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53621-1", "protein_name": "Coatomer subunit alpha", "gene_name": "COPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35606-1", "protein_name": "Coatomer subunit beta'", "gene_name": "COPB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61923-1", "protein_name": "Coatomer subunit zeta-1", "gene_name": "COPZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48444-1", "protein_name": "Coatomer subunit delta", "gene_name": "ARCN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33947-1", "protein_name": "ER lumen protein-retaining receptor 2", "gene_name": "KDELR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00399-1", "protein_name": "Dynactin subunit 6", "gene_name": "DCTN6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49257-1", "protein_name": "Protein ERGIC-53", "gene_name": "LMAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42261-1", "protein_name": "Glutamate receptor 1", "gene_name": "GRIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14789-1", "protein_name": "Golgin subfamily B member 1", "gene_name": "GOLGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR2-1", "protein_name": "Cathepsin Z", "gene_name": "CTSZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MW5-1", "protein_name": "Conserved oligomeric Golgi complex subunit 8", "gene_name": "COG8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95406-1", "protein_name": "Protein cornichon homolog 1", "gene_name": "CNIH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", "protein_name": "Protein SEC13 homolog", "gene_name": "SEC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75396-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "SEC22B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JE7-1", "protein_name": "Protein transport protein Sec16B", "gene_name": "SEC16B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95487-1", "protein_name": "Protein transport protein Sec24B", "gene_name": "SEC24B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56962-1", "protein_name": "Syntaxin-17", "gene_name": "STX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53618-1", "protein_name": "Coatomer subunit beta", "gene_name": "COPB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01082-1", "protein_name": "Spectrin beta chain, non-erythrocytic 1", "gene_name": "SPTBN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H254-1", "protein_name": "Spectrin beta chain, non-erythrocytic 4", "gene_name": "SPTBN4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2V7-1", "protein_name": "Conserved oligomeric Golgi complex subunit 6", "gene_name": "COG6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P47756-2", "protein_name": "F-actin-capping protein subunit beta", "gene_name": "CAPZB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYM9-1", "protein_name": "BET1-like protein", "gene_name": "BET1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P47755-1", "protein_name": "F-actin-capping protein subunit alpha-2", "gene_name": "CAPZA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52907-1", "protein_name": "F-actin-capping protein subunit alpha-1", "gene_name": "CAPZA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13409-1", "protein_name": "Cytoplasmic dynein 1 intermediate chain 2", "gene_name": "DYNC1I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14576-1", "protein_name": "Cytoplasmic dynein 1 intermediate chain 1", "gene_name": "DYNC1I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08174-1", "protein_name": "Complement decay-accelerating factor", "gene_name": "CD55", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6G9-1", "protein_name": "Cytoplasmic dynein 1 light intermediate chain 1", "gene_name": "DYNC1LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing protein 10", "gene_name": "TMED10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11277-1", "protein_name": "Spectrin beta chain, erythrocytic", "gene_name": "SPTB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRC6-1", "protein_name": "Spectrin beta chain, non-erythrocytic 5", "gene_name": "SPTBN5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NNZ2-1", "protein_name": "Tubulin beta 8B", "gene_name": "TUBB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3ZCM7-1", "protein_name": "Tubulin beta-8 chain", "gene_name": "TUBB8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14653-1", "protein_name": "Golgi SNAP receptor complex member 2", "gene_name": "GOSR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02549-1", "protein_name": "Spectrin alpha chain, erythrocytic 1", "gene_name": "SPTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61163-1", "protein_name": "Alpha-centractin", "gene_name": "ACTR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18085-1", "protein_name": "ADP-ribosylation factor 4", "gene_name": "ARF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61204-1", "protein_name": "ADP-ribosylation factor 3", "gene_name": "ARF3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP61-1", "protein_name": "ADP-ribosylation factor GTPase-activating protein 3", "gene_name": "ARFGAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14579-1", "protein_name": "Coatomer subunit epsilon", "gene_name": "COPE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WTW3-1", "protein_name": "Conserved oligomeric Golgi complex subunit 1", "gene_name": "COG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92538-4", "protein_name": "Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1", "gene_name": "GBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JB2-1", "protein_name": "Conserved oligomeric Golgi complex subunit 3", "gene_name": "COG3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9E3-1", "protein_name": "Conserved oligomeric Golgi complex subunit 4", "gene_name": "COG4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P83436-1", "protein_name": "Conserved oligomeric Golgi complex subunit 7", "gene_name": "COG7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14746-1", "protein_name": "Conserved oligomeric Golgi complex subunit 2", "gene_name": "COG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBF2-1", "protein_name": "Coatomer subunit gamma-2", "gene_name": "COPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UP83-2", "protein_name": "Conserved oligomeric Golgi complex subunit 5", "gene_name": "COG5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y678-1", "protein_name": "Coatomer subunit gamma-1", "gene_name": "COPG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P299-1", "protein_name": "Coatomer subunit zeta-2", "gene_name": "COPZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43731-1", "protein_name": "ER lumen protein-retaining receptor 3", "gene_name": "KDELR3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24390-1", "protein_name": "ER lumen protein-retaining receptor 1", "gene_name": "KDELR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95249-1", "protein_name": "Golgi SNAP receptor complex member 1", "gene_name": "GOSR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13561-1", "protein_name": "Dynactin subunit 2", "gene_name": "DCTN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJW0-1", "protein_name": "Dynactin subunit 4", "gene_name": "DCTN4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTE1-1", "protein_name": "Dynactin subunit 5", "gene_name": "DCTN5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVK6-1", "protein_name": "Transmembrane emp24 domain-containing protein 9", "gene_name": "TMED9", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15020-1", "protein_name": "Spectrin beta chain, non-erythrocytic 2", "gene_name": "SPTBN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H853-1", "protein_name": "Tubulin-like protein alpha-4B", "gene_name": "TUBA4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3Q3-1", "protein_name": "Transmembrane emp24 domain-containing protein 3", "gene_name": "TMED3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3B3-1", "protein_name": "Transmembrane emp24 domain-containing protein 7", "gene_name": "TMED7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KX2-1", "protein_name": "F-actin-capping protein subunit alpha-3", "gene_name": "CAPZA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75935-1", "protein_name": "Dynactin subunit 3", "gene_name": "DCTN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43237-1", "protein_name": "Cytoplasmic dynein 1 light intermediate chain 2", "gene_name": "DYNC1LI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14204-1", "protein_name": "Cytoplasmic dynein 1 heavy chain 1", "gene_name": "DYNC1H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13813-1", "protein_name": "Spectrin alpha chain, non-erythrocytic 1", "gene_name": "SPTAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01308-1", "protein_name": "Insulin", "gene_name": "INS", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NHL2-1", "protein_name": "Tubulin alpha chain-like 3", "gene_name": "TUBAL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY65-1", "protein_name": "Tubulin alpha-8 chain", "gene_name": "TUBA8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10903204", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 154 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Dynamics of transitional endoplasmic reticulum sites in vertebrate cells.", "journal": "Molecular biology of the cell", "date": "2000", "authors": "Hammond AT, Glick BS", "reference": { "type": "PubMed", "id": "10982397", "url": "https://pubmed.ncbi.nlm.nih.gov/10982397" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { 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"gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEB9-1", "protein_name": "Phosphatidylinositol 3-kinase catalytic subunit type 3", "gene_name": "PIK3C3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51572-1", "protein_name": "B-cell receptor-associated protein 31", "gene_name": "BCAP31", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZNE5-1", "protein_name": "Beclin 1-associated autophagy-related key regulator", "gene_name": "ATG14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange 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"uniprot_canonical_ac": "Q03518-1", "protein_name": "Antigen peptide transporter 1", "gene_name": "TAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01893-1", "protein_name": "Putative HLA class I histocompatibility antigen, alpha chain H", "gene_name": "HLA-H", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P179-1", "protein_name": "Endoplasmic reticulum aminopeptidase 2", "gene_name": "ERAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZ08-1", "protein_name": "Endoplasmic reticulum aminopeptidase 1", "gene_name": "ERAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30101-1", "protein_name": "Protein disulfide-isomerase A3", "gene_name": "PDIA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27797-1", "protein_name": "Calreticulin", "gene_name": "CALR", "tax_name": "Human" }, { 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Subunit structure of a mammalian ER/Golgi SNARE complex.", "journal": "The Journal of biological chemistry", "date": "2000", "authors": "Xu D, Joglekar AP, Williams AL, Hay JC", "reference": { "type": "PubMed", "id": "11035026", "url": "https://pubmed.ncbi.nlm.nih.gov/11035026" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15498-1", "protein_name": "Synaptobrevin homolog YKT6", "gene_name": "YKT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQW1-1", "protein_name": "Protein transport protein Sec31B", "gene_name": "SEC31B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00743-1", "protein_name": "Serine/threonine-protein phosphatase 6 catalytic subunit", "gene_name": "PPP6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9R7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 3", "gene_name": "PPP6R3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H115-1", "protein_name": "Beta-soluble NSF attachment protein", "gene_name": "NAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15514-1", "protein_name": "Amphiregulin", "gene_name": "AREG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49257-1", "protein_name": "Protein ERGIC-53", "gene_name": "LMAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42261-1", "protein_name": "Glutamate receptor 1", "gene_name": "GRIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR2-1", "protein_name": "Cathepsin Z", "gene_name": "CTSZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95406-1", "protein_name": "Protein cornichon homolog 1", "gene_name": "CNIH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", "protein_name": "Protein SEC13 homolog", "gene_name": "SEC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75396-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "SEC22B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JE7-1", "protein_name": "Protein transport protein Sec16B", "gene_name": "SEC16B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95487-1", "protein_name": "Protein transport protein Sec24B", "gene_name": "SEC24B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56962-1", "protein_name": "Syntaxin-17", "gene_name": "STX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing protein 10", "gene_name": "TMED10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14653-1", "protein_name": "Golgi SNAP receptor complex member 2", "gene_name": "GOSR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4KM74-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "Sec22b", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11035026", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 70 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Rab1 interaction with a GM130 effector complex regulates COPII vesicle cis--Golgi tethering.", "journal": "Traffic (Copenhagen, Denmark)", "date": "2001", "authors": "Moyer BD, Allan BB, Balch WE", "reference": { "type": "PubMed", "id": "11285137", "url": "https://pubmed.ncbi.nlm.nih.gov/11285137" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15498-1", "protein_name": "Synaptobrevin homolog YKT6", "gene_name": "YKT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQW1-1", "protein_name": "Protein transport protein Sec31B", "gene_name": "SEC31B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12893-1", "protein_name": "Transmembrane protein 115", "gene_name": "TMEM115", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00743-1", "protein_name": "Serine/threonine-protein phosphatase 6 catalytic subunit", "gene_name": "PPP6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9R7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 3", "gene_name": "PPP6R3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H115-1", "protein_name": "Beta-soluble NSF attachment protein", "gene_name": "NAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14203-1", "protein_name": "Dynactin subunit 1", "gene_name": "DCTN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16157-1", "protein_name": "Ankyrin-1", "gene_name": "ANK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28482-1", "protein_name": "Mitogen-activated protein kinase 1", "gene_name": "MAPK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15514-1", "protein_name": "Amphiregulin", "gene_name": "AREG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01484-4", "protein_name": "Ankyrin-2", "gene_name": "ANK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12955-3", "protein_name": "Ankyrin-3", "gene_name": "ANK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6H7-1", "protein_name": "ADP-ribosylation factor GTPase-activating protein 2", "gene_name": "ARFGAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84085-1", "protein_name": "ADP-ribosylation factor 5", "gene_name": "ARF5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84077-1", "protein_name": "ADP-ribosylation factor 1", "gene_name": "ARF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6T3-1", "protein_name": "ADP-ribosylation factor GTPase-activating protein 1", "gene_name": "ARFGAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZ32-1", "protein_name": "Actin-related protein 10", "gene_name": "ACTR10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PEY2-1", "protein_name": "Tubulin alpha-3E chain", "gene_name": "TUBA3E", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53621-1", "protein_name": "Coatomer subunit alpha", "gene_name": "COPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35606-1", "protein_name": "Coatomer subunit beta'", "gene_name": "COPB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61923-1", "protein_name": "Coatomer subunit zeta-1", "gene_name": "COPZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48444-1", "protein_name": "Coatomer subunit delta", "gene_name": "ARCN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33947-1", "protein_name": "ER lumen protein-retaining receptor 2", "gene_name": "KDELR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00399-1", "protein_name": "Dynactin subunit 6", "gene_name": "DCTN6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49257-1", "protein_name": "Protein ERGIC-53", "gene_name": "LMAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42261-1", "protein_name": "Glutamate receptor 1", "gene_name": "GRIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14789-1", "protein_name": "Golgin subfamily B member 1", "gene_name": "GOLGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR2-1", "protein_name": "Cathepsin Z", "gene_name": "CTSZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MW5-1", "protein_name": "Conserved oligomeric Golgi complex subunit 8", "gene_name": "COG8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95406-1", "protein_name": "Protein cornichon homolog 1", "gene_name": "CNIH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", "protein_name": "Protein SEC13 homolog", "gene_name": "SEC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75396-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "SEC22B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JE7-1", "protein_name": "Protein transport protein Sec16B", "gene_name": "SEC16B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95487-1", "protein_name": "Protein transport protein Sec24B", "gene_name": "SEC24B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56962-1", "protein_name": "Syntaxin-17", "gene_name": "STX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53350-1", "protein_name": "Serine/threonine-protein kinase PLK1", "gene_name": "PLK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53618-1", "protein_name": "Coatomer subunit beta", "gene_name": "COPB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01082-1", "protein_name": "Spectrin beta chain, non-erythrocytic 1", "gene_name": "SPTBN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H254-1", "protein_name": "Spectrin beta chain, non-erythrocytic 4", "gene_name": "SPTBN4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2V7-1", "protein_name": "Conserved oligomeric Golgi complex subunit 6", "gene_name": "COG6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06493-1", "protein_name": "Cyclin-dependent kinase 1", "gene_name": "CDK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P47756-2", "protein_name": "F-actin-capping protein subunit beta", "gene_name": "CAPZB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYM9-1", "protein_name": "BET1-like protein", "gene_name": "BET1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P47755-1", "protein_name": "F-actin-capping protein subunit alpha-2", "gene_name": "CAPZA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52907-1", "protein_name": "F-actin-capping protein subunit alpha-1", "gene_name": "CAPZA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13409-1", "protein_name": "Cytoplasmic dynein 1 intermediate chain 2", "gene_name": "DYNC1I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14576-1", "protein_name": "Cytoplasmic dynein 1 intermediate chain 1", "gene_name": "DYNC1I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08174-1", "protein_name": "Complement decay-accelerating factor", "gene_name": "CD55", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6G9-1", "protein_name": "Cytoplasmic dynein 1 light intermediate chain 1", "gene_name": "DYNC1LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing protein 10", "gene_name": "TMED10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11277-1", "protein_name": "Spectrin beta chain, erythrocytic", "gene_name": "SPTB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRC6-1", "protein_name": "Spectrin beta chain, non-erythrocytic 5", "gene_name": "SPTBN5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NNZ2-1", "protein_name": "Tubulin beta 8B", "gene_name": "TUBB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3ZCM7-1", "protein_name": "Tubulin beta-8 chain", "gene_name": "TUBB8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14653-1", "protein_name": "Golgi SNAP receptor complex member 2", "gene_name": "GOSR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02549-1", "protein_name": "Spectrin alpha chain, erythrocytic 1", "gene_name": "SPTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61163-1", "protein_name": "Alpha-centractin", "gene_name": "ACTR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18085-1", "protein_name": "ADP-ribosylation factor 4", "gene_name": "ARF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61204-1", "protein_name": "ADP-ribosylation factor 3", "gene_name": "ARF3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP61-1", "protein_name": "ADP-ribosylation factor GTPase-activating protein 3", "gene_name": "ARFGAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14579-1", "protein_name": "Coatomer subunit epsilon", "gene_name": "COPE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WTW3-1", "protein_name": "Conserved oligomeric Golgi complex subunit 1", "gene_name": "COG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92538-4", "protein_name": "Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1", "gene_name": "GBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JB2-1", "protein_name": "Conserved oligomeric Golgi complex subunit 3", "gene_name": "COG3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9E3-1", "protein_name": "Conserved oligomeric Golgi complex subunit 4", "gene_name": "COG4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P83436-1", "protein_name": "Conserved oligomeric Golgi complex subunit 7", "gene_name": "COG7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14746-1", "protein_name": "Conserved oligomeric Golgi complex subunit 2", "gene_name": "COG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBF2-1", "protein_name": "Coatomer subunit gamma-2", "gene_name": "COPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UP83-2", "protein_name": "Conserved oligomeric Golgi complex subunit 5", "gene_name": "COG5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y678-1", "protein_name": "Coatomer subunit gamma-1", "gene_name": "COPG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P299-1", "protein_name": "Coatomer subunit zeta-2", "gene_name": "COPZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43731-1", "protein_name": "ER lumen protein-retaining receptor 3", "gene_name": "KDELR3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24390-1", "protein_name": "ER lumen protein-retaining receptor 1", "gene_name": "KDELR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95249-1", "protein_name": "Golgi SNAP receptor complex member 1", "gene_name": "GOSR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13561-1", "protein_name": "Dynactin subunit 2", "gene_name": "DCTN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJW0-1", "protein_name": "Dynactin subunit 4", "gene_name": "DCTN4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTE1-1", "protein_name": "Dynactin subunit 5", "gene_name": "DCTN5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVK6-1", "protein_name": "Transmembrane emp24 domain-containing protein 9", "gene_name": "TMED9", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15020-1", "protein_name": "Spectrin beta chain, non-erythrocytic 2", "gene_name": "SPTBN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H853-1", "protein_name": "Tubulin-like protein alpha-4B", "gene_name": "TUBA4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3Q3-1", "protein_name": "Transmembrane emp24 domain-containing protein 3", "gene_name": "TMED3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3B3-1", "protein_name": "Transmembrane emp24 domain-containing protein 7", "gene_name": "TMED7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95067-1", "protein_name": "G2/mitotic-specific cyclin-B2", "gene_name": "CCNB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14635-1", "protein_name": "G2/mitotic-specific cyclin-B1", "gene_name": "CCNB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KX2-1", "protein_name": "F-actin-capping protein subunit alpha-3", "gene_name": "CAPZA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75935-1", "protein_name": "Dynactin subunit 3", "gene_name": "DCTN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43237-1", "protein_name": "Cytoplasmic dynein 1 light intermediate chain 2", "gene_name": "DYNC1LI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14204-1", "protein_name": "Cytoplasmic dynein 1 heavy chain 1", "gene_name": "DYNC1H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61019-1", "protein_name": "Ras-related protein Rab-2A", "gene_name": "RAB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13813-1", "protein_name": "Spectrin alpha chain, non-erythrocytic 1", "gene_name": "SPTAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01308-1", "protein_name": "Insulin", "gene_name": "INS", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NHL2-1", "protein_name": "Tubulin alpha chain-like 3", "gene_name": "TUBAL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY65-1", "protein_name": "Tubulin alpha-8 chain", "gene_name": "TUBA8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H8Y8-1", "protein_name": "Golgi reassembly-stacking protein 2", "gene_name": "GORASP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2G9-1", "protein_name": "Golgin-45", "gene_name": "BLZF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11285137", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 162 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Golgi matrix protein GM130: a specific interacting partner of the small GTPase rab1b.", "journal": "EMBO reports", "date": "2001", "authors": "Weide T, Bayer M, Koster M, Siebrasse JP, Peters R, Barnekow A", "reference": { "type": "PubMed", "id": "11306556", "url": "https://pubmed.ncbi.nlm.nih.gov/11306556" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15498-1", "protein_name": "Synaptobrevin homolog YKT6", "gene_name": "YKT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQW1-1", "protein_name": "Protein transport protein Sec31B", "gene_name": "SEC31B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12893-1", "protein_name": "Transmembrane protein 115", "gene_name": "TMEM115", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00743-1", "protein_name": "Serine/threonine-protein phosphatase 6 catalytic subunit", "gene_name": "PPP6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9R7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 3", "gene_name": "PPP6R3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H115-1", "protein_name": "Beta-soluble NSF attachment protein", "gene_name": "NAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14203-1", "protein_name": "Dynactin subunit 1", "gene_name": "DCTN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16157-1", "protein_name": "Ankyrin-1", "gene_name": "ANK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28482-1", "protein_name": "Mitogen-activated protein kinase 1", "gene_name": "MAPK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15514-1", "protein_name": "Amphiregulin", "gene_name": "AREG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01484-4", "protein_name": "Ankyrin-2", "gene_name": "ANK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12955-3", "protein_name": "Ankyrin-3", "gene_name": "ANK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6H7-1", "protein_name": "ADP-ribosylation factor GTPase-activating protein 2", "gene_name": "ARFGAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84085-1", "protein_name": "ADP-ribosylation factor 5", "gene_name": "ARF5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84077-1", "protein_name": "ADP-ribosylation factor 1", "gene_name": "ARF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6T3-1", "protein_name": "ADP-ribosylation factor GTPase-activating protein 1", "gene_name": "ARFGAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZ32-1", "protein_name": "Actin-related protein 10", "gene_name": "ACTR10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PEY2-1", "protein_name": "Tubulin alpha-3E chain", "gene_name": "TUBA3E", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53621-1", "protein_name": "Coatomer subunit alpha", "gene_name": "COPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35606-1", "protein_name": "Coatomer subunit beta'", "gene_name": "COPB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61923-1", "protein_name": "Coatomer subunit zeta-1", "gene_name": "COPZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48444-1", "protein_name": "Coatomer subunit delta", "gene_name": "ARCN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33947-1", "protein_name": "ER lumen protein-retaining receptor 2", "gene_name": "KDELR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00399-1", "protein_name": "Dynactin subunit 6", "gene_name": "DCTN6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49257-1", "protein_name": "Protein ERGIC-53", "gene_name": "LMAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42261-1", "protein_name": "Glutamate receptor 1", "gene_name": "GRIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14789-1", "protein_name": "Golgin subfamily B member 1", "gene_name": "GOLGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR2-1", "protein_name": "Cathepsin Z", "gene_name": "CTSZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MW5-1", "protein_name": "Conserved oligomeric Golgi complex subunit 8", "gene_name": "COG8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95406-1", "protein_name": "Protein cornichon homolog 1", "gene_name": "CNIH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", "protein_name": "Protein SEC13 homolog", "gene_name": "SEC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75396-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "SEC22B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JE7-1", "protein_name": "Protein transport protein Sec16B", "gene_name": "SEC16B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95487-1", "protein_name": "Protein transport protein Sec24B", "gene_name": "SEC24B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56962-1", "protein_name": "Syntaxin-17", "gene_name": "STX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53350-1", "protein_name": "Serine/threonine-protein kinase PLK1", "gene_name": "PLK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53618-1", "protein_name": "Coatomer subunit beta", "gene_name": "COPB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01082-1", "protein_name": "Spectrin beta chain, non-erythrocytic 1", "gene_name": "SPTBN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H254-1", "protein_name": "Spectrin beta chain, non-erythrocytic 4", "gene_name": "SPTBN4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2V7-1", "protein_name": "Conserved oligomeric Golgi complex subunit 6", "gene_name": "COG6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06493-1", "protein_name": "Cyclin-dependent kinase 1", "gene_name": "CDK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P47756-2", "protein_name": "F-actin-capping protein subunit beta", "gene_name": "CAPZB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYM9-1", "protein_name": "BET1-like protein", "gene_name": "BET1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P47755-1", "protein_name": "F-actin-capping protein subunit alpha-2", "gene_name": "CAPZA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52907-1", "protein_name": "F-actin-capping protein subunit alpha-1", "gene_name": "CAPZA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13409-1", "protein_name": "Cytoplasmic dynein 1 intermediate chain 2", "gene_name": "DYNC1I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14576-1", "protein_name": "Cytoplasmic dynein 1 intermediate chain 1", "gene_name": "DYNC1I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08174-1", "protein_name": "Complement decay-accelerating factor", "gene_name": "CD55", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6G9-1", "protein_name": "Cytoplasmic dynein 1 light intermediate chain 1", "gene_name": "DYNC1LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing protein 10", "gene_name": "TMED10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11277-1", "protein_name": "Spectrin beta chain, erythrocytic", "gene_name": "SPTB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRC6-1", "protein_name": "Spectrin beta chain, non-erythrocytic 5", "gene_name": "SPTBN5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NNZ2-1", "protein_name": "Tubulin beta 8B", "gene_name": "TUBB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3ZCM7-1", "protein_name": "Tubulin beta-8 chain", "gene_name": "TUBB8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14653-1", "protein_name": "Golgi SNAP receptor complex member 2", "gene_name": "GOSR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02549-1", "protein_name": "Spectrin alpha chain, erythrocytic 1", "gene_name": "SPTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61163-1", "protein_name": "Alpha-centractin", "gene_name": "ACTR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18085-1", "protein_name": "ADP-ribosylation factor 4", "gene_name": "ARF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61204-1", "protein_name": "ADP-ribosylation factor 3", "gene_name": "ARF3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP61-1", "protein_name": "ADP-ribosylation factor GTPase-activating protein 3", "gene_name": "ARFGAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14579-1", "protein_name": "Coatomer subunit epsilon", "gene_name": "COPE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WTW3-1", "protein_name": "Conserved oligomeric Golgi complex subunit 1", "gene_name": "COG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92538-4", "protein_name": "Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1", "gene_name": "GBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JB2-1", "protein_name": "Conserved oligomeric Golgi complex subunit 3", "gene_name": "COG3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9E3-1", "protein_name": "Conserved oligomeric Golgi complex subunit 4", "gene_name": "COG4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P83436-1", "protein_name": "Conserved oligomeric Golgi complex subunit 7", "gene_name": "COG7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14746-1", "protein_name": "Conserved oligomeric Golgi complex subunit 2", "gene_name": "COG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBF2-1", "protein_name": "Coatomer subunit gamma-2", "gene_name": "COPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UP83-2", "protein_name": "Conserved oligomeric Golgi complex subunit 5", "gene_name": "COG5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y678-1", "protein_name": "Coatomer subunit gamma-1", "gene_name": "COPG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P299-1", "protein_name": "Coatomer subunit zeta-2", "gene_name": "COPZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43731-1", "protein_name": "ER lumen protein-retaining receptor 3", "gene_name": "KDELR3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24390-1", "protein_name": "ER lumen protein-retaining receptor 1", "gene_name": "KDELR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95249-1", "protein_name": "Golgi SNAP receptor complex member 1", "gene_name": "GOSR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13561-1", "protein_name": "Dynactin subunit 2", "gene_name": "DCTN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJW0-1", "protein_name": "Dynactin subunit 4", "gene_name": "DCTN4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTE1-1", "protein_name": "Dynactin subunit 5", "gene_name": "DCTN5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVK6-1", "protein_name": "Transmembrane emp24 domain-containing protein 9", "gene_name": "TMED9", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15020-1", "protein_name": "Spectrin beta chain, non-erythrocytic 2", "gene_name": "SPTBN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H853-1", "protein_name": "Tubulin-like protein alpha-4B", "gene_name": "TUBA4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3Q3-1", "protein_name": "Transmembrane emp24 domain-containing protein 3", "gene_name": "TMED3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3B3-1", "protein_name": "Transmembrane emp24 domain-containing protein 7", "gene_name": "TMED7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95067-1", "protein_name": "G2/mitotic-specific cyclin-B2", "gene_name": "CCNB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14635-1", "protein_name": "G2/mitotic-specific cyclin-B1", "gene_name": "CCNB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KX2-1", "protein_name": "F-actin-capping protein subunit alpha-3", "gene_name": "CAPZA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75935-1", "protein_name": "Dynactin subunit 3", "gene_name": "DCTN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43237-1", "protein_name": "Cytoplasmic dynein 1 light intermediate chain 2", "gene_name": "DYNC1LI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14204-1", "protein_name": "Cytoplasmic dynein 1 heavy chain 1", "gene_name": "DYNC1H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61019-1", "protein_name": "Ras-related protein Rab-2A", "gene_name": "RAB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13813-1", "protein_name": "Spectrin alpha chain, non-erythrocytic 1", "gene_name": "SPTAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01308-1", "protein_name": "Insulin", "gene_name": "INS", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NHL2-1", "protein_name": "Tubulin alpha chain-like 3", "gene_name": "TUBAL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY65-1", "protein_name": "Tubulin alpha-8 chain", "gene_name": "TUBA8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H8Y8-1", "protein_name": "Golgi reassembly-stacking protein 2", "gene_name": "GORASP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2G9-1", "protein_name": "Golgin-45", "gene_name": "BLZF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11306556", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 162 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Sequential tethering of Golgins and catalysis of SNAREpin assembly by the vesicle-tethering protein p115.", "journal": "The Journal of cell biology", "date": "2002", "authors": "Shorter J, Beard MB, Seemann J, Dirac-Svejstrup AB, Warren G", "reference": { "type": "PubMed", "id": "11927603", "url": "https://pubmed.ncbi.nlm.nih.gov/11927603" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15498-1", "protein_name": "Synaptobrevin homolog YKT6", "gene_name": "YKT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQW1-1", "protein_name": "Protein transport protein Sec31B", "gene_name": "SEC31B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00743-1", "protein_name": "Serine/threonine-protein phosphatase 6 catalytic subunit", "gene_name": "PPP6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9R7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 3", "gene_name": "PPP6R3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H115-1", "protein_name": "Beta-soluble NSF attachment protein", "gene_name": "NAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15514-1", "protein_name": "Amphiregulin", "gene_name": "AREG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49257-1", "protein_name": "Protein ERGIC-53", "gene_name": "LMAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42261-1", "protein_name": "Glutamate receptor 1", "gene_name": "GRIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR2-1", "protein_name": "Cathepsin Z", "gene_name": "CTSZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95406-1", "protein_name": "Protein cornichon homolog 1", "gene_name": "CNIH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", "protein_name": "Protein SEC13 homolog", "gene_name": "SEC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75396-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "SEC22B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JE7-1", "protein_name": "Protein transport protein Sec16B", "gene_name": "SEC16B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95487-1", "protein_name": "Protein transport protein Sec24B", "gene_name": "SEC24B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56962-1", "protein_name": "Syntaxin-17", "gene_name": "STX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing protein 10", "gene_name": "TMED10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14653-1", "protein_name": "Golgi SNAP receptor complex member 2", "gene_name": "GOSR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q62931-1", "protein_name": "Golgi SNAP receptor complex member 1", "gene_name": "Gosr1", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5EGY4-1", "protein_name": "Synaptobrevin homolog YKT6", "gene_name": "Ykt6", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11927603", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 71 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { 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"gene_name": "SEC13", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P49257-1", "protein_name": "Protein ERGIC-53", "gene_name": "LMAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42261-1", "protein_name": "Glutamate receptor 1", "gene_name": "GRIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR2-1", "protein_name": "Cathepsin Z", "gene_name": "CTSZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95406-1", "protein_name": "Protein cornichon homolog 1", "gene_name": "CNIH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", "protein_name": "Protein SEC13 homolog", "gene_name": "SEC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75396-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "SEC22B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JE7-1", "protein_name": "Protein transport protein Sec16B", "gene_name": "SEC16B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95487-1", "protein_name": "Protein transport protein Sec24B", "gene_name": "SEC24B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56962-1", "protein_name": "Syntaxin-17", "gene_name": "STX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing protein 10", "gene_name": "TMED10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14653-1", "protein_name": "Golgi SNAP receptor complex member 2", "gene_name": "GOSR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20606-1", "protein_name": "Small COPII coat GTPase SAR1", "gene_name": "SAR1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P38968-1", "protein_name": "Protein transport protein SEC31", "gene_name": "SEC31", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P40482-1", "protein_name": "Protein transport protein SEC24", "gene_name": "SEC24", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P48415-1", "protein_name": "COPII coat assembly protein SEC16", "gene_name": "SEC16", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P15303-1", "protein_name": "Protein transport protein SEC23", "gene_name": "SEC23", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12235121", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 75 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Genomic amplification and oncogenic properties of the KCNK9 potassium channel gene.", "journal": "Cancer Cell", "date": "2003", "authors": "Mu David, Chen Liyun, Zhang Xiping, See Lei-Hoon, Koch Christina M, Yen Clifford, Tong James Jiayuan, Spiegel Lori, Nguyen Ken C Q, Servoss Allyson, Peng Yue, Pei Lin, Marks Jeffrey R, Lowe Scott, Hoey Timothy, Jan Lily Yeh, McCombie W Richard, Wigler Michael H, Powers Scott", "reference": { "type": "PubMed", "id": "12676587", "url": "https://pubmed.ncbi.nlm.nih.gov/12676587" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPC2-1", "protein_name": "Potassium channel subfamily K member 9", "gene_name": "KCNK9", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": 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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "NIBP, a novel NIK and IKK(beta)-binding protein that enhances NF-(kappa)B activation.", "journal": "The Journal of biological chemistry", "date": "2005", "authors": "Hu WH, Pendergast JS, Mo XM, Brambilla R, Bracchi-Ricard V, Li F, Walters WM, Blits B, He L, Schaal SM, Bethea JR", "reference": { "type": "PubMed", "id": "15951441", "url": "https://pubmed.ncbi.nlm.nih.gov/15951441" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14920-1", "protein_name": "Inhibitor of nuclear factor kappa-B kinase subunit beta", "gene_name": "IKBKB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99558-1", "protein_name": "Mitogen-activated protein kinase kinase kinase 14", "gene_name": "MAP3K14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3U0M1-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "Trappc9", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15951441", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cysteine-disulfide cross-linking to monitor SNARE complex assembly during endoplasmic reticulum-Golgi transport.", "journal": "The Journal of biological chemistry", "date": "2006", "authors": "Flanagan JJ, Barlowe C", "reference": { "type": "PubMed", "id": "16303754", "url": "https://pubmed.ncbi.nlm.nih.gov/16303754" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15498-1", "protein_name": "Synaptobrevin homolog YKT6", "gene_name": "YKT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQW1-1", "protein_name": "Protein transport protein Sec31B", "gene_name": "SEC31B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00743-1", "protein_name": "Serine/threonine-protein phosphatase 6 catalytic subunit", "gene_name": "PPP6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9R7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 3", "gene_name": "PPP6R3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H115-1", "protein_name": "Beta-soluble NSF attachment protein", "gene_name": "NAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15514-1", "protein_name": "Amphiregulin", "gene_name": "AREG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49257-1", "protein_name": "Protein ERGIC-53", "gene_name": "LMAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42261-1", "protein_name": "Glutamate receptor 1", "gene_name": "GRIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR2-1", "protein_name": "Cathepsin Z", "gene_name": "CTSZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95406-1", "protein_name": "Protein cornichon homolog 1", "gene_name": "CNIH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", "protein_name": "Protein SEC13 homolog", "gene_name": "SEC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75396-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "SEC22B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JE7-1", "protein_name": "Protein transport protein Sec16B", "gene_name": "SEC16B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95487-1", "protein_name": "Protein transport protein Sec24B", "gene_name": "SEC24B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56962-1", "protein_name": "Syntaxin-17", "gene_name": "STX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing protein 10", "gene_name": "TMED10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14653-1", "protein_name": "Golgi SNAP receptor complex member 2", "gene_name": "GOSR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16303754", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 69 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Human Sec31B: a family of new mammalian orthologues of yeast Sec31p that associate with the COPII coat.", "journal": "Journal of cell science", "date": "2006", "authors": "Stankewich MC, Stabach PR, Morrow JS", "reference": { "type": "PubMed", "id": "16495487", "url": "https://pubmed.ncbi.nlm.nih.gov/16495487" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15498-1", "protein_name": "Synaptobrevin homolog YKT6", "gene_name": "YKT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQW1-1", "protein_name": "Protein transport protein Sec31B", "gene_name": "SEC31B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00743-1", "protein_name": "Serine/threonine-protein phosphatase 6 catalytic subunit", "gene_name": "PPP6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9R7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 3", "gene_name": "PPP6R3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H115-1", "protein_name": "Beta-soluble NSF attachment protein", "gene_name": "NAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15514-1", "protein_name": "Amphiregulin", "gene_name": "AREG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49257-1", "protein_name": "Protein ERGIC-53", "gene_name": "LMAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42261-1", "protein_name": "Glutamate receptor 1", "gene_name": "GRIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR2-1", "protein_name": "Cathepsin Z", "gene_name": "CTSZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95406-1", "protein_name": "Protein cornichon homolog 1", "gene_name": "CNIH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", "protein_name": "Protein SEC13 homolog", "gene_name": "SEC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75396-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "SEC22B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JE7-1", "protein_name": "Protein transport protein Sec16B", "gene_name": "SEC16B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95487-1", "protein_name": "Protein transport protein Sec24B", "gene_name": "SEC24B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56962-1", "protein_name": "Syntaxin-17", "gene_name": "STX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon 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"GOSR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16495487", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 69 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "On and off membrane dynamics of the endoplasmic reticulum-golgi tethering factor p115 in vivo.", "journal": "Molecular biology of the cell", "date": "2006", "authors": "Brandon E, Szul T, Alvarez C, Grabski R, Benjamin R, Kawai R, Sztul E", "reference": { "type": "PubMed", "id": "16624868", "url": "https://pubmed.ncbi.nlm.nih.gov/16624868" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15498-1", "protein_name": "Synaptobrevin homolog YKT6", "gene_name": "YKT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQW1-1", "protein_name": "Protein transport protein Sec31B", "gene_name": "SEC31B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00743-1", "protein_name": "Serine/threonine-protein phosphatase 6 catalytic subunit", "gene_name": "PPP6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9R7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 3", "gene_name": "PPP6R3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H115-1", "protein_name": "Beta-soluble NSF attachment protein", "gene_name": "NAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15514-1", "protein_name": "Amphiregulin", "gene_name": "AREG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49257-1", "protein_name": "Protein ERGIC-53", "gene_name": "LMAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42261-1", "protein_name": "Glutamate receptor 1", "gene_name": "GRIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR2-1", "protein_name": "Cathepsin Z", "gene_name": "CTSZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95406-1", "protein_name": "Protein cornichon homolog 1", "gene_name": "CNIH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", "protein_name": "Protein SEC13 homolog", "gene_name": "SEC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75396-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "SEC22B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JE7-1", "protein_name": "Protein transport protein Sec16B", "gene_name": "SEC16B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95487-1", "protein_name": "Protein transport protein Sec24B", "gene_name": "SEC24B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56962-1", "protein_name": "Syntaxin-17", "gene_name": "STX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing protein 10", "gene_name": "TMED10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14653-1", "protein_name": "Golgi SNAP receptor complex member 2", "gene_name": "GOSR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", 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"uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing protein 10", "gene_name": "TMED10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14653-1", "protein_name": "Golgi SNAP receptor complex member 2", "gene_name": "GOSR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17038314", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 69 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Two mammalian Sec16 homologues have nonredundant functions in endoplasmic reticulum (ER) export and transitional ER organization.", "journal": "Molecular biology of the cell", "date": "2007", "authors": "Bhattacharyya D, Glick BS", "reference": { "type": "PubMed", "id": "17192411", "url": "https://pubmed.ncbi.nlm.nih.gov/17192411" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15498-1", "protein_name": "Synaptobrevin homolog YKT6", "gene_name": "YKT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQW1-1", "protein_name": "Protein transport protein Sec31B", "gene_name": "SEC31B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00743-1", "protein_name": "Serine/threonine-protein phosphatase 6 catalytic subunit", "gene_name": "PPP6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9R7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 3", "gene_name": "PPP6R3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H115-1", "protein_name": "Beta-soluble NSF attachment protein", "gene_name": "NAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15514-1", "protein_name": "Amphiregulin", "gene_name": "AREG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49257-1", "protein_name": "Protein ERGIC-53", "gene_name": "LMAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42261-1", "protein_name": "Glutamate receptor 1", "gene_name": "GRIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR2-1", "protein_name": "Cathepsin Z", "gene_name": "CTSZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95406-1", "protein_name": "Protein cornichon homolog 1", "gene_name": "CNIH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", "protein_name": "Protein SEC13 homolog", "gene_name": "SEC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75396-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "SEC22B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JE7-1", "protein_name": "Protein transport protein Sec16B", "gene_name": "SEC16B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95487-1", "protein_name": "Protein transport protein Sec24B", "gene_name": "SEC24B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56962-1", "protein_name": "Syntaxin-17", "gene_name": "STX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing protein 10", "gene_name": "TMED10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14653-1", "protein_name": "Golgi SNAP receptor complex member 2", "gene_name": "GOSR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17192411", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 69 } ], 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"gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEB9-1", "protein_name": "Phosphatidylinositol 3-kinase catalytic subunit type 3", "gene_name": "PIK3C3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51572-1", "protein_name": "B-cell receptor-associated protein 31", "gene_name": "BCAP31", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZNE5-1", "protein_name": "Beclin 1-associated autophagy-related key regulator", "gene_name": "ATG14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q03518-1", "protein_name": "Antigen peptide transporter 1", "gene_name": "TAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01893-1", "protein_name": "Putative HLA class I histocompatibility antigen, alpha chain H", "gene_name": "HLA-H", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P179-1", "protein_name": "Endoplasmic reticulum aminopeptidase 2", "gene_name": "ERAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZ08-1", "protein_name": "Endoplasmic reticulum aminopeptidase 1", "gene_name": "ERAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30101-1", "protein_name": "Protein disulfide-isomerase A3", "gene_name": "PDIA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27797-1", "protein_name": "Calreticulin", "gene_name": "CALR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01889-1", "protein_name": "HLA class I histocompatibility antigen, B alpha chain", "gene_name": "HLA-B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17316621", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 91 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structural basis of cargo membrane protein discrimination by the human COPII coat machinery.", "journal": "The EMBO journal", "date": "2008", "authors": "Mancias JD, Goldberg J", "reference": { "type": "PubMed", "id": "18843296", "url": "https://pubmed.ncbi.nlm.nih.gov/18843296" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex 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J. Hum. Genet.", "date": "2009", "authors": "Mochida GH, Mahajnah M, Hill AD, Basel-Vanagaite L, Gleason D, Hill RS, Bodell A, Crosier M, Straussberg R, Walsh CA", "reference": { "type": "PubMed", "id": "20004763", "url": "https://pubmed.ncbi.nlm.nih.gov/20004763" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20004763", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of mutations in TRAPPC9, which encodes the NIK- and IKK-beta-binding protein, in nonsyndromic autosomal-recessive mental retardation.", "journal": "Am. J. Hum. Genet.", "date": "2009", "authors": "Mir A, Kaufman L, Noor A, Motazacker MM, Jamil T, Azam M, Kahrizi K, Rafiq MA, Weksberg R, Nasr T, Naeem F, Tzschach A, Kuss AW, Ishak GE, Doherty D, Ropers HH, Barkovich AJ, Najmabadi H, Ayub M, Vincent JB", "reference": { "type": "PubMed", "id": "20004765", "url": "https://pubmed.ncbi.nlm.nih.gov/20004765" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20004765", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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"uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing protein 10", "gene_name": "TMED10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14653-1", "protein_name": "Golgi SNAP receptor complex member 2", "gene_name": "GOSR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20545907", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 69 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "p125A exists as part of the mammalian Sec13/Sec31 COPII subcomplex to facilitate ER-Golgi transport.", "journal": "The Journal of cell biology", "date": "2010", "authors": "Ong YS, Tang BL, Loo LS, Hong W", "reference": { "type": "PubMed", "id": "20679433", "url": "https://pubmed.ncbi.nlm.nih.gov/20679433" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15498-1", "protein_name": "Synaptobrevin homolog YKT6", "gene_name": "YKT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQW1-1", "protein_name": "Protein transport protein Sec31B", "gene_name": "SEC31B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00743-1", "protein_name": "Serine/threonine-protein phosphatase 6 catalytic subunit", "gene_name": "PPP6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9R7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 3", "gene_name": "PPP6R3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H115-1", "protein_name": "Beta-soluble NSF attachment protein", "gene_name": "NAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15514-1", "protein_name": "Amphiregulin", "gene_name": "AREG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49257-1", "protein_name": "Protein ERGIC-53", "gene_name": "LMAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42261-1", "protein_name": "Glutamate receptor 1", "gene_name": "GRIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR2-1", "protein_name": "Cathepsin Z", "gene_name": "CTSZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95406-1", "protein_name": "Protein cornichon homolog 1", "gene_name": "CNIH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", "protein_name": "Protein SEC13 homolog", "gene_name": "SEC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75396-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "SEC22B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JE7-1", "protein_name": "Protein transport protein Sec16B", "gene_name": "SEC16B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95487-1", "protein_name": "Protein transport protein Sec24B", "gene_name": "SEC24B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56962-1", "protein_name": "Syntaxin-17", "gene_name": "STX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing protein 10", "gene_name": "TMED10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14653-1", "protein_name": "Golgi SNAP receptor complex member 2", "gene_name": "GOSR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20679433", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 69 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "TRAPP complexes in membrane traffic: convergence through a common Rab.", "journal": "Nature reviews. Molecular cell biology", "date": "2010", "authors": "Barrowman J, Bhandari D, Reinisch K, Ferro-Novick S", "reference": { "type": "PubMed", "id": "20966969", "url": "https://pubmed.ncbi.nlm.nih.gov/20966969" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15498-1", "protein_name": "Synaptobrevin homolog YKT6", "gene_name": "YKT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQW1-1", "protein_name": "Protein transport protein Sec31B", "gene_name": "SEC31B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00743-1", "protein_name": "Serine/threonine-protein phosphatase 6 catalytic subunit", "gene_name": "PPP6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9R7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 3", "gene_name": "PPP6R3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H115-1", "protein_name": "Beta-soluble NSF attachment protein", "gene_name": "NAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15514-1", "protein_name": "Amphiregulin", "gene_name": "AREG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49257-1", "protein_name": "Protein ERGIC-53", "gene_name": "LMAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42261-1", "protein_name": "Glutamate receptor 1", "gene_name": "GRIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR2-1", "protein_name": "Cathepsin Z", "gene_name": "CTSZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95406-1", "protein_name": "Protein cornichon 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P56962-1", "protein_name": "Syntaxin-17", "gene_name": "STX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing protein 10", "gene_name": "TMED10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14653-1", "protein_name": "Golgi SNAP receptor 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"uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein 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"tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": 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}, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "TFG-1 function in protein secretion and oncogenesis.", "journal": "Nature cell biology", "date": "2011", "authors": "Witte K, Schuh AL, Hegermann J, Sarkeshik A, Mayers JR, Schwarze K, Yates JR 3rd, Eimer S, Audhya A", "reference": { 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attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", "protein_name": "Protein SEC13 homolog", "gene_name": "SEC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75396-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "SEC22B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JE7-1", "protein_name": "Protein transport protein Sec16B", "gene_name": "SEC16B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95487-1", "protein_name": "Protein transport protein Sec24B", "gene_name": "SEC24B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56962-1", "protein_name": "Syntaxin-17", "gene_name": "STX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing protein 10", "gene_name": "TMED10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14653-1", "protein_name": "Golgi SNAP receptor complex member 2", "gene_name": "GOSR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21478858", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 69 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "C4orf41 and TTC-15 are mammalian TRAPP components with a role at an early stage in ER-to-Golgi trafficking.", "journal": "Mol. Biol. Cell", "date": "2011", "authors": "Scrivens PJ, Noueihed B, Shahrzad N, Hul S, Brunet S, Sacher M", "reference": { "type": "PubMed", "id": "21525244", "url": "https://pubmed.ncbi.nlm.nih.gov/21525244" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2L5-1", "protein_name": "Trafficking protein particle complex subunit 8", "gene_name": "TRAPPC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5T215-1", "protein_name": "Trafficking protein particle complex subunit 3-like protein", "gene_name": "TRAPPC3L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVT3-1", "protein_name": "Trafficking protein particle complex subunit 12", "gene_name": "TRAPPC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z392-1", "protein_name": "Trafficking protein particle complex subunit 11", "gene_name": "TRAPPC11", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21525244", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 11 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Sec24p and Sec16p cooperate to regulate the GTP cycle of the COPII coat.", "journal": "The EMBO journal", "date": "2012", "authors": "Kung LF, Pagant S, Futai E, D'Arcangelo JG, Buchanan R, Dittmar JC, Reid RJ, Rothstein R, Hamamoto S, Snapp EL, Schekman R, Miller EA", "reference": { "type": "PubMed", "id": "22157747", "url": "https://pubmed.ncbi.nlm.nih.gov/22157747" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15498-1", "protein_name": "Synaptobrevin homolog YKT6", "gene_name": "YKT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQW1-1", "protein_name": "Protein transport protein Sec31B", "gene_name": "SEC31B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00743-1", "protein_name": "Serine/threonine-protein phosphatase 6 catalytic subunit", "gene_name": "PPP6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9R7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 3", "gene_name": "PPP6R3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H115-1", "protein_name": "Beta-soluble NSF attachment protein", "gene_name": "NAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15514-1", "protein_name": "Amphiregulin", "gene_name": "AREG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49257-1", "protein_name": "Protein ERGIC-53", "gene_name": "LMAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42261-1", "protein_name": "Glutamate receptor 1", "gene_name": "GRIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR2-1", "protein_name": "Cathepsin Z", "gene_name": "CTSZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95406-1", "protein_name": "Protein cornichon homolog 1", "gene_name": "CNIH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", "protein_name": "Protein SEC13 homolog", "gene_name": "SEC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75396-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "SEC22B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JE7-1", "protein_name": "Protein transport protein Sec16B", "gene_name": "SEC16B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95487-1", "protein_name": "Protein transport protein Sec24B", "gene_name": "SEC24B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56962-1", "protein_name": "Syntaxin-17", "gene_name": "STX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing protein 10", "gene_name": "TMED10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14653-1", "protein_name": "Golgi SNAP receptor complex member 2", "gene_name": "GOSR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22157747", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 69 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Insights into structural and regulatory roles of Sec16 in COPII vesicle formation at ER exit sites.", "journal": "Molecular biology of the cell", "date": "2012", "authors": "Yorimitsu T, Sato K", "reference": { "type": "PubMed", "id": "22675024", "url": "https://pubmed.ncbi.nlm.nih.gov/22675024" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15498-1", "protein_name": "Synaptobrevin homolog YKT6", "gene_name": "YKT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQW1-1", "protein_name": "Protein transport protein Sec31B", "gene_name": "SEC31B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00743-1", "protein_name": "Serine/threonine-protein phosphatase 6 catalytic subunit", "gene_name": "PPP6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9R7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 3", "gene_name": "PPP6R3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H115-1", "protein_name": "Beta-soluble NSF attachment protein", "gene_name": "NAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15514-1", "protein_name": "Amphiregulin", "gene_name": "AREG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49257-1", "protein_name": "Protein ERGIC-53", "gene_name": "LMAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42261-1", "protein_name": "Glutamate receptor 1", "gene_name": "GRIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR2-1", "protein_name": "Cathepsin Z", "gene_name": "CTSZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95406-1", "protein_name": "Protein cornichon homolog 1", "gene_name": "CNIH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", "protein_name": "Protein SEC13 homolog", "gene_name": "SEC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75396-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "SEC22B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JE7-1", "protein_name": "Protein transport protein Sec16B", "gene_name": "SEC16B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95487-1", "protein_name": "Protein transport protein Sec24B", "gene_name": "SEC24B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56962-1", "protein_name": "Syntaxin-17", "gene_name": "STX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing protein 10", "gene_name": "TMED10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14653-1", "protein_name": "Golgi SNAP receptor complex member 2", "gene_name": "GOSR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22675024", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 69 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Inhibition of TFG function causes hereditary axon degeneration by impairing endoplasmic reticulum structure.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2013", "authors": "Beetz C, Johnson A, Schuh AL, Thakur S, Varga RE, Fothergill T, Hertel N, Bomba-Warczak E, Thiele H, Nurnberg G, Altmuller J, Saxena R, Chapman ER, Dent EW, Nurnberg P, Audhya A", "reference": { "type": "PubMed", "id": "23479643", "url": "https://pubmed.ncbi.nlm.nih.gov/23479643" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15498-1", "protein_name": "Synaptobrevin homolog YKT6", "gene_name": "YKT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQW1-1", "protein_name": "Protein transport protein Sec31B", "gene_name": "SEC31B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00743-1", "protein_name": "Serine/threonine-protein phosphatase 6 catalytic subunit", "gene_name": "PPP6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9R7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 3", "gene_name": "PPP6R3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H115-1", "protein_name": "Beta-soluble NSF attachment protein", "gene_name": "NAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15514-1", "protein_name": "Amphiregulin", "gene_name": "AREG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49257-1", "protein_name": "Protein ERGIC-53", "gene_name": "LMAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42261-1", "protein_name": "Glutamate receptor 1", "gene_name": "GRIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR2-1", "protein_name": "Cathepsin Z", "gene_name": "CTSZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95406-1", "protein_name": "Protein cornichon homolog 1", "gene_name": "CNIH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", "protein_name": "Protein SEC13 homolog", "gene_name": "SEC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75396-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "SEC22B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JE7-1", "protein_name": "Protein transport protein Sec16B", "gene_name": "SEC16B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95487-1", "protein_name": "Protein transport protein Sec24B", "gene_name": "SEC24B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56962-1", "protein_name": "Syntaxin-17", "gene_name": "STX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing protein 10", "gene_name": "TMED10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF 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"Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": 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"sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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membrane traffic control.", "journal": "Nature reviews. Molecular cell biology", "date": "2013", "authors": "Brandizzi F, Barlowe C", "reference": { "type": "PubMed", "id": "23698585", "url": "https://pubmed.ncbi.nlm.nih.gov/23698585" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15498-1", "protein_name": "Synaptobrevin homolog YKT6", "gene_name": "YKT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQW1-1", "protein_name": "Protein transport protein Sec31B", "gene_name": "SEC31B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00743-1", "protein_name": "Serine/threonine-protein phosphatase 6 catalytic subunit", "gene_name": "PPP6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9R7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 3", "gene_name": "PPP6R3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H115-1", "protein_name": "Beta-soluble NSF attachment protein", "gene_name": "NAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15514-1", "protein_name": "Amphiregulin", "gene_name": "AREG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49257-1", "protein_name": "Protein ERGIC-53", "gene_name": "LMAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42261-1", "protein_name": "Glutamate receptor 1", "gene_name": "GRIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR2-1", "protein_name": "Cathepsin Z", "gene_name": "CTSZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95406-1", "protein_name": "Protein cornichon homolog 1", "gene_name": "CNIH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", "protein_name": "Protein SEC13 homolog", "gene_name": "SEC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75396-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "SEC22B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JE7-1", "protein_name": "Protein transport protein Sec16B", "gene_name": "SEC16B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95487-1", "protein_name": "Protein transport protein Sec24B", "gene_name": "SEC24B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56962-1", "protein_name": "Syntaxin-17", "gene_name": "STX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon 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"protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.23698585", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 69 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Sit4p/PP6 regulates ER-to-Golgi traffic by controlling the dephosphorylation of COPII coat subunits.", "journal": "Molecular biology of the cell", "date": "2013", "authors": "Bhandari D, Zhang J, Menon S, Lord C, Chen S, Helm JR, Thorsen K, Corbett KD, Hay JC, Ferro-Novick S", "reference": { "type": "PubMed", "id": "23864707", "url": "https://pubmed.ncbi.nlm.nih.gov/23864707" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15498-1", "protein_name": "Synaptobrevin homolog YKT6", "gene_name": "YKT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQW1-1", "protein_name": "Protein transport protein Sec31B", "gene_name": "SEC31B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00743-1", "protein_name": "Serine/threonine-protein phosphatase 6 catalytic subunit", "gene_name": "PPP6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9R7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 3", "gene_name": "PPP6R3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H115-1", "protein_name": "Beta-soluble NSF attachment protein", "gene_name": "NAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15514-1", "protein_name": "Amphiregulin", "gene_name": "AREG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49257-1", "protein_name": "Protein ERGIC-53", "gene_name": "LMAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42261-1", "protein_name": "Glutamate receptor 1", "gene_name": "GRIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR2-1", "protein_name": "Cathepsin Z", "gene_name": "CTSZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95406-1", "protein_name": "Protein cornichon homolog 1", "gene_name": "CNIH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", "protein_name": "Protein SEC13 homolog", "gene_name": "SEC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75396-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "SEC22B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JE7-1", "protein_name": "Protein transport protein Sec16B", "gene_name": "SEC16B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95487-1", "protein_name": "Protein transport protein Sec24B", "gene_name": "SEC24B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56962-1", "protein_name": "Syntaxin-17", "gene_name": "STX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing protein 10", "gene_name": "TMED10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14653-1", "protein_name": "Golgi SNAP receptor complex member 2", "gene_name": "GOSR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.23864707", "abstract": "", "glycosylation": [], "mutagenesis": [], 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Concentration of Sec12 at ER exit sites via interaction with cTAGE5 is required for collagen export.", "journal": "The Journal of cell biology", "date": "2014", "authors": "Saito K, Yamashiro K, Shimazu N, Tanabe T, Kontani K, Katada T", "reference": { "type": "PubMed", "id": "25202031", "url": "https://pubmed.ncbi.nlm.nih.gov/25202031" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15498-1", "protein_name": "Synaptobrevin homolog YKT6", "gene_name": "YKT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQW1-1", "protein_name": "Protein transport protein Sec31B", "gene_name": "SEC31B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00743-1", "protein_name": "Serine/threonine-protein phosphatase 6 catalytic subunit", "gene_name": "PPP6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9R7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 3", "gene_name": "PPP6R3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H115-1", "protein_name": "Beta-soluble NSF attachment protein", "gene_name": "NAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15514-1", "protein_name": "Amphiregulin", "gene_name": "AREG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49257-1", "protein_name": "Protein ERGIC-53", "gene_name": "LMAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42261-1", "protein_name": "Glutamate receptor 1", "gene_name": "GRIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR2-1", "protein_name": "Cathepsin Z", "gene_name": "CTSZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95406-1", "protein_name": "Protein cornichon homolog 1", "gene_name": "CNIH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", "protein_name": "Protein SEC13 homolog", "gene_name": "SEC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75396-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "SEC22B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JE7-1", "protein_name": "Protein transport protein Sec16B", "gene_name": "SEC16B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95487-1", "protein_name": "Protein transport protein Sec24B", "gene_name": "SEC24B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56962-1", "protein_name": "Syntaxin-17", "gene_name": "STX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing protein 10", "gene_name": "TMED10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14653-1", "protein_name": "Golgi SNAP receptor complex member 2", "gene_name": "GOSR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5JRA6-1", "protein_name": "Transport and Golgi organization protein 1 homolog", "gene_name": "MIA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PC5-3", "protein_name": "Melanoma inhibitory activity protein 2", "gene_name": "MIA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.25202031", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 71 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "p115-SNARE interactions: a dynamic cycle of p115 binding monomeric SNARE motifs and releasing assembled bundles.", "journal": "Traffic (Copenhagen, Denmark)", "date": "2015", "authors": "Wang T, Grabski R, Sztul E, Hay JC", "reference": { "type": "PubMed", "id": "25406594", "url": "https://pubmed.ncbi.nlm.nih.gov/25406594" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15498-1", "protein_name": "Synaptobrevin homolog YKT6", "gene_name": "YKT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQW1-1", "protein_name": "Protein transport protein Sec31B", "gene_name": "SEC31B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00743-1", "protein_name": "Serine/threonine-protein phosphatase 6 catalytic subunit", "gene_name": "PPP6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9R7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 3", "gene_name": "PPP6R3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H115-1", "protein_name": "Beta-soluble NSF attachment protein", "gene_name": "NAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15514-1", "protein_name": "Amphiregulin", "gene_name": "AREG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41542-1", "protein_name": "General vesicular transport factor p115", "gene_name": "Uso1", "tax_name": "Rat" }, { "uniprot_canonical_ac": "P49257-1", "protein_name": "Protein ERGIC-53", "gene_name": "LMAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42261-1", "protein_name": "Glutamate receptor 1", "gene_name": "GRIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR2-1", "protein_name": "Cathepsin Z", "gene_name": "CTSZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95406-1", "protein_name": "Protein cornichon homolog 1", "gene_name": "CNIH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", "protein_name": "Protein SEC13 homolog", "gene_name": "SEC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75396-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "SEC22B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JE7-1", "protein_name": "Protein transport protein Sec16B", "gene_name": "SEC16B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95487-1", "protein_name": "Protein transport protein Sec24B", "gene_name": "SEC24B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56962-1", "protein_name": "Syntaxin-17", "gene_name": "STX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing protein 10", "gene_name": "TMED10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14653-1", "protein_name": "Golgi SNAP receptor complex member 2", "gene_name": "GOSR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.25406594", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 70 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "TFG clusters COPII-coated transport carriers and promotes early secretory pathway organization.", "journal": "The EMBO journal", "date": "2015", "authors": "Johnson A, Bhattacharya N, Hanna M, Pennington JG, Schuh AL, Wang L, Otegui MS, Stagg SM, Audhya A", "reference": { "type": "PubMed", "id": "25586378", "url": "https://pubmed.ncbi.nlm.nih.gov/25586378" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15498-1", "protein_name": "Synaptobrevin homolog YKT6", "gene_name": "YKT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQW1-1", "protein_name": "Protein transport protein Sec31B", "gene_name": "SEC31B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00743-1", "protein_name": "Serine/threonine-protein phosphatase 6 catalytic subunit", "gene_name": "PPP6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9R7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 3", "gene_name": "PPP6R3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H115-1", "protein_name": "Beta-soluble NSF attachment protein", "gene_name": "NAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15514-1", "protein_name": "Amphiregulin", "gene_name": "AREG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49257-1", "protein_name": "Protein ERGIC-53", "gene_name": "LMAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42261-1", "protein_name": "Glutamate receptor 1", "gene_name": "GRIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR2-1", "protein_name": "Cathepsin Z", "gene_name": "CTSZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95406-1", "protein_name": "Protein cornichon homolog 1", "gene_name": "CNIH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", "protein_name": "Protein SEC13 homolog", "gene_name": "SEC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75396-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "SEC22B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JE7-1", "protein_name": "Protein transport protein Sec16B", "gene_name": "SEC16B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95487-1", "protein_name": "Protein transport protein Sec24B", "gene_name": "SEC24B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56962-1", "protein_name": "Syntaxin-17", "gene_name": "STX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing protein 10", "gene_name": "TMED10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14653-1", "protein_name": "Golgi SNAP receptor complex member 2", "gene_name": "GOSR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.25586378", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 69 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "SEC16 in COPII coat dynamics at ER exit sites.", "journal": "Biochemical Society transactions", "date": "2015", "authors": "Sprangers J, Rabouille C", "reference": { "type": "PubMed", "id": "25619252", "url": "https://pubmed.ncbi.nlm.nih.gov/25619252" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15498-1", "protein_name": "Synaptobrevin homolog YKT6", "gene_name": "YKT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQW1-1", "protein_name": "Protein transport protein Sec31B", "gene_name": "SEC31B", "tax_name": "Human" }, { 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"protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing protein 10", "gene_name": "TMED10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14653-1", "protein_name": "Golgi SNAP receptor 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"uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein 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"tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": 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{ "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 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"date": "2021", "authors": "Ben Ayed I, Bouchaala W, Bouzid A, Feki W, Souissi A, Ben Nsir S, Ben Said M, Sammouda T, Majdoub F, Kharrat I, Kamoun F, Elloumi I, Kamoun H, Tlili A, Masmoudi S, Triki C", "reference": { "type": "PubMed", "id": "34737153", "url": "https://pubmed.ncbi.nlm.nih.gov/34737153" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.34737153", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": 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Luis, Pallard\u00f3 Federico V, Vento M\u00e1ximo", "reference": { "type": "PubMed", "id": "35760056", "url": "https://pubmed.ncbi.nlm.nih.gov/35760056" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.35760056", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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}, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": 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"gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": 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"Human" }, { "uniprot_canonical_ac": "O15498-1", "protein_name": "Synaptobrevin homolog YKT6", "gene_name": "YKT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQW1-1", "protein_name": "Protein transport protein Sec31B", "gene_name": "SEC31B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00743-1", "protein_name": "Serine/threonine-protein phosphatase 6 catalytic subunit", "gene_name": "PPP6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9R7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 3", "gene_name": "PPP6R3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H115-1", "protein_name": "Beta-soluble NSF attachment protein", "gene_name": "NAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15514-1", "protein_name": "Amphiregulin", "gene_name": "AREG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O35165-1", "protein_name": "Golgi SNAP receptor complex member 2", "gene_name": "Gosr2", "tax_name": "Rat" }, { "uniprot_canonical_ac": "P49257-1", "protein_name": "Protein ERGIC-53", "gene_name": "LMAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42261-1", "protein_name": "Glutamate receptor 1", "gene_name": "GRIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR2-1", "protein_name": "Cathepsin Z", "gene_name": "CTSZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95406-1", "protein_name": "Protein cornichon homolog 1", "gene_name": "CNIH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", "protein_name": "Protein SEC13 homolog", "gene_name": "SEC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75396-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "SEC22B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JE7-1", "protein_name": "Protein transport protein Sec16B", "gene_name": "SEC16B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95487-1", "protein_name": "Protein transport protein Sec24B", "gene_name": "SEC24B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O08547-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "Sec22b", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P56962-1", "protein_name": "Syntaxin-17", "gene_name": "STX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing protein 10", "gene_name": "TMED10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14653-1", "protein_name": "Golgi SNAP receptor complex member 2", "gene_name": "GOSR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q62931-1", "protein_name": "Golgi SNAP receptor complex member 1", "gene_name": "Gosr1", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P36365-1", "protein_name": "Flavin-containing monooxygenase 1", "gene_name": "Fmo1", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9094723", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 73 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The vesicle docking protein p115 binds GM130, a cis-Golgi matrix protein, in a mitotically regulated manner.", "journal": "Cell", "date": "1997", "authors": "Nakamura N, Lowe M, Levine TP, Rabouille C, Warren G", "reference": { "type": "PubMed", "id": "9150144", "url": "https://pubmed.ncbi.nlm.nih.gov/9150144" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15498-1", "protein_name": "Synaptobrevin homolog YKT6", "gene_name": "YKT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQW1-1", "protein_name": "Protein transport protein Sec31B", "gene_name": "SEC31B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12893-1", "protein_name": "Transmembrane protein 115", "gene_name": "TMEM115", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00743-1", "protein_name": "Serine/threonine-protein phosphatase 6 catalytic subunit", "gene_name": "PPP6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9R7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 3", "gene_name": "PPP6R3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H115-1", "protein_name": "Beta-soluble NSF attachment protein", "gene_name": "NAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14203-1", "protein_name": "Dynactin subunit 1", "gene_name": "DCTN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16157-1", "protein_name": "Ankyrin-1", "gene_name": "ANK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28482-1", "protein_name": "Mitogen-activated protein kinase 1", "gene_name": "MAPK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15514-1", "protein_name": "Amphiregulin", "gene_name": "AREG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01484-4", "protein_name": "Ankyrin-2", "gene_name": "ANK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12955-3", "protein_name": "Ankyrin-3", "gene_name": "ANK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6H7-1", "protein_name": "ADP-ribosylation factor GTPase-activating protein 2", "gene_name": "ARFGAP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84085-1", "protein_name": "ADP-ribosylation factor 5", "gene_name": "ARF5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84077-1", "protein_name": "ADP-ribosylation factor 1", "gene_name": "ARF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6T3-1", "protein_name": "ADP-ribosylation factor GTPase-activating protein 1", "gene_name": "ARFGAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZ32-1", "protein_name": "Actin-related protein 10", "gene_name": "ACTR10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68363-1", "protein_name": "Tubulin alpha-1B chain", "gene_name": "TUBA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PEY2-1", "protein_name": "Tubulin alpha-3E chain", "gene_name": "TUBA3E", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53621-1", "protein_name": "Coatomer subunit alpha", "gene_name": "COPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68366-1", "protein_name": "Tubulin alpha-4A chain", "gene_name": "TUBA4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35606-1", "protein_name": "Coatomer subunit beta'", "gene_name": "COPB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71U36-1", "protein_name": "Tubulin alpha-1A chain", "gene_name": "TUBA1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61923-1", "protein_name": "Coatomer subunit zeta-1", "gene_name": "COPZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48444-1", "protein_name": "Coatomer subunit delta", "gene_name": "ARCN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41542-1", "protein_name": "General vesicular transport factor p115", "gene_name": "Uso1", "tax_name": "Rat" }, { "uniprot_canonical_ac": "P33947-1", "protein_name": "ER lumen protein-retaining receptor 2", "gene_name": "KDELR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00399-1", "protein_name": "Dynactin subunit 6", "gene_name": "DCTN6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49257-1", "protein_name": "Protein ERGIC-53", "gene_name": "LMAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42261-1", "protein_name": "Glutamate receptor 1", "gene_name": "GRIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14789-1", "protein_name": "Golgin subfamily B member 1", "gene_name": "GOLGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR2-1", "protein_name": "Cathepsin Z", "gene_name": "CTSZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVA1-1", "protein_name": "Tubulin beta-2B chain", "gene_name": "TUBB2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96MW5-1", "protein_name": "Conserved oligomeric Golgi complex subunit 8", "gene_name": "COG8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95406-1", "protein_name": "Protein cornichon homolog 1", "gene_name": "CNIH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", "protein_name": "Protein SEC13 homolog", "gene_name": "SEC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75396-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "SEC22B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JE7-1", "protein_name": "Protein transport protein Sec16B", "gene_name": "SEC16B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95487-1", "protein_name": "Protein transport protein Sec24B", "gene_name": "SEC24B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56962-1", "protein_name": "Syntaxin-17", "gene_name": "STX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53350-1", "protein_name": "Serine/threonine-protein kinase PLK1", "gene_name": "PLK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53618-1", "protein_name": "Coatomer subunit beta", "gene_name": "COPB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01082-1", "protein_name": "Spectrin beta chain, non-erythrocytic 1", "gene_name": "SPTBN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H254-1", "protein_name": "Spectrin beta chain, non-erythrocytic 4", "gene_name": "SPTBN4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2V7-1", "protein_name": "Conserved oligomeric Golgi complex subunit 6", "gene_name": "COG6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06493-1", "protein_name": "Cyclin-dependent kinase 1", "gene_name": "CDK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P47756-2", "protein_name": "F-actin-capping protein subunit beta", "gene_name": "CAPZB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYM9-1", "protein_name": "BET1-like protein", "gene_name": "BET1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P47755-1", "protein_name": "F-actin-capping protein subunit alpha-2", "gene_name": "CAPZA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52907-1", "protein_name": "F-actin-capping protein subunit alpha-1", "gene_name": "CAPZA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13409-1", "protein_name": "Cytoplasmic dynein 1 intermediate chain 2", "gene_name": "DYNC1I2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14576-1", "protein_name": "Cytoplasmic dynein 1 intermediate chain 1", "gene_name": "DYNC1I1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08174-1", "protein_name": "Complement decay-accelerating factor", "gene_name": "CD55", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6G9-1", "protein_name": "Cytoplasmic dynein 1 light intermediate chain 1", "gene_name": "DYNC1LI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing protein 10", "gene_name": "TMED10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11277-1", "protein_name": "Spectrin beta chain, erythrocytic", "gene_name": "SPTB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRC6-1", "protein_name": "Spectrin beta chain, non-erythrocytic 5", "gene_name": "SPTBN5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUF5-1", "protein_name": "Tubulin beta-6 chain", "gene_name": "TUBB6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NNZ2-1", "protein_name": "Tubulin beta 8B", "gene_name": "TUBB8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3ZCM7-1", "protein_name": "Tubulin beta-8 chain", "gene_name": "TUBB8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14653-1", "protein_name": "Golgi SNAP receptor complex member 2", "gene_name": "GOSR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04350-1", "protein_name": "Tubulin beta-4A chain", "gene_name": "TUBB4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q62839-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "Golga2", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q13885-1", "protein_name": "Tubulin beta-2A chain", "gene_name": "TUBB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02549-1", "protein_name": "Spectrin alpha chain, erythrocytic 1", "gene_name": "SPTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61163-1", "protein_name": "Alpha-centractin", "gene_name": "ACTR1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63167-1", "protein_name": "Dynein light chain 1, cytoplasmic", "gene_name": "DYNLL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18085-1", "protein_name": "ADP-ribosylation factor 4", "gene_name": "ARF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61204-1", "protein_name": "ADP-ribosylation factor 3", "gene_name": "ARF3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP61-1", "protein_name": "ADP-ribosylation factor GTPase-activating protein 3", "gene_name": "ARFGAP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14579-1", "protein_name": "Coatomer subunit epsilon", "gene_name": "COPE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WTW3-1", "protein_name": "Conserved oligomeric Golgi complex subunit 1", "gene_name": "COG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92538-4", "protein_name": "Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1", "gene_name": "GBF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JB2-1", "protein_name": "Conserved oligomeric Golgi complex subunit 3", "gene_name": "COG3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9E3-1", "protein_name": "Conserved oligomeric Golgi complex subunit 4", "gene_name": "COG4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P83436-1", "protein_name": "Conserved oligomeric Golgi complex subunit 7", "gene_name": "COG7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14746-1", "protein_name": "Conserved oligomeric Golgi complex subunit 2", "gene_name": "COG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBF2-1", "protein_name": "Coatomer subunit gamma-2", "gene_name": "COPG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UP83-2", "protein_name": "Conserved oligomeric Golgi complex subunit 5", "gene_name": "COG5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y678-1", "protein_name": "Coatomer subunit gamma-1", "gene_name": "COPG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P299-1", "protein_name": "Coatomer subunit zeta-2", "gene_name": "COPZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43731-1", "protein_name": "ER lumen protein-retaining receptor 3", "gene_name": "KDELR3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24390-1", "protein_name": "ER lumen protein-retaining receptor 1", "gene_name": "KDELR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95249-1", "protein_name": "Golgi SNAP receptor complex member 1", "gene_name": "GOSR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH8-1", "protein_name": "Tubulin alpha-3D chain", "gene_name": "TUBA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13561-1", "protein_name": "Dynactin subunit 2", "gene_name": "DCTN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJW0-1", "protein_name": "Dynactin subunit 4", "gene_name": "DCTN4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FJ2-1", "protein_name": "Dynein light chain 2, cytoplasmic", "gene_name": "DYNLL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTE1-1", "protein_name": "Dynactin subunit 5", "gene_name": "DCTN5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVK6-1", "protein_name": "Transmembrane emp24 domain-containing protein 9", "gene_name": "TMED9", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13509-1", "protein_name": "Tubulin beta-3 chain", "gene_name": "TUBB3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQE3-1", "protein_name": "Tubulin alpha-1C chain", "gene_name": "TUBA1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15020-1", "protein_name": "Spectrin beta chain, non-erythrocytic 2", "gene_name": "SPTBN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68371-1", "protein_name": "Tubulin beta-4B chain", "gene_name": "TUBB4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B7-1", "protein_name": "Tubulin beta-1 chain", "gene_name": "TUBB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H853-1", "protein_name": "Tubulin-like protein alpha-4B", "gene_name": "TUBA4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3Q3-1", "protein_name": "Transmembrane emp24 domain-containing protein 3", "gene_name": "TMED3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3B3-1", "protein_name": "Transmembrane emp24 domain-containing protein 7", "gene_name": "TMED7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95067-1", "protein_name": "G2/mitotic-specific cyclin-B2", "gene_name": "CCNB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14635-1", "protein_name": "G2/mitotic-specific cyclin-B1", "gene_name": "CCNB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KX2-1", "protein_name": "F-actin-capping protein subunit alpha-3", "gene_name": "CAPZA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75935-1", "protein_name": "Dynactin subunit 3", "gene_name": "DCTN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43237-1", "protein_name": "Cytoplasmic dynein 1 light intermediate chain 2", "gene_name": "DYNC1LI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14204-1", "protein_name": "Cytoplasmic dynein 1 heavy chain 1", "gene_name": "DYNC1H1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61019-1", "protein_name": "Ras-related protein Rab-2A", "gene_name": "RAB2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13813-1", "protein_name": "Spectrin alpha chain, non-erythrocytic 1", "gene_name": "SPTAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01308-1", "protein_name": "Insulin", "gene_name": "INS", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NHL2-1", "protein_name": "Tubulin alpha chain-like 3", "gene_name": "TUBAL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NY65-1", "protein_name": "Tubulin alpha-8 chain", "gene_name": "TUBA8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DPH7-1", "protein_name": "Tubulin alpha-3C chain", "gene_name": "TUBA3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H8Y8-1", "protein_name": "Golgi reassembly-stacking protein 2", "gene_name": "GORASP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2G9-1", "protein_name": "Golgin-45", "gene_name": "BLZF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9150144", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 164 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "An isoform of the Golgi t-SNARE, syntaxin 5, with an endoplasmic reticulum retrieval signal.", "journal": "Molecular biology of the cell", "date": "1997", "authors": "Hui N, Nakamura N, Sonnichsen B, Shima DT, Nilsson T, Warren G", "reference": { "type": "PubMed", "id": "9307973", "url": "https://pubmed.ncbi.nlm.nih.gov/9307973" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96Q05-1", "protein_name": "Trafficking protein particle complex subunit 9", "gene_name": "TRAPPC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5R8-1", "protein_name": "Trafficking protein particle complex subunit 1", "gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15498-1", "protein_name": "Synaptobrevin homolog YKT6", "gene_name": "YKT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQW1-1", "protein_name": "Protein transport protein Sec31B", "gene_name": "SEC31B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00743-1", "protein_name": "Serine/threonine-protein phosphatase 6 catalytic subunit", "gene_name": "PPP6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9R7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 3", "gene_name": "PPP6R3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H115-1", "protein_name": "Beta-soluble NSF attachment protein", "gene_name": "NAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15514-1", "protein_name": "Amphiregulin", "gene_name": "AREG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49257-1", "protein_name": "Protein ERGIC-53", "gene_name": "LMAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42261-1", "protein_name": "Glutamate receptor 1", "gene_name": "GRIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR2-1", "protein_name": "Cathepsin Z", "gene_name": "CTSZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95406-1", "protein_name": "Protein cornichon homolog 1", "gene_name": "CNIH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", "protein_name": "Protein SEC13 homolog", "gene_name": "SEC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75396-1", "protein_name": "Vesicle-trafficking protein SEC22b", "gene_name": "SEC22B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JE7-1", "protein_name": "Protein transport protein Sec16B", "gene_name": "SEC16B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95487-1", "protein_name": "Protein transport protein Sec24B", "gene_name": "SEC24B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56962-1", "protein_name": "Syntaxin-17", "gene_name": "STX17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6B6-1", "protein_name": "Small COPII coat GTPase SAR1B", "gene_name": "SAR1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01135-1", "protein_name": "Protransforming growth factor alpha", "gene_name": "TGFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53634-1", "protein_name": "Dipeptidyl peptidase 1", "gene_name": "CTSC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": "Multiple coagulation factor deficiency protein 2", "gene_name": "MCFD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49755-1", "protein_name": "Transmembrane emp24 domain-containing protein 10", "gene_name": "TMED10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99747-1", "protein_name": "Gamma-soluble NSF attachment protein", "gene_name": "NAPG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14653-1", "protein_name": "Golgi SNAP receptor complex member 2", "gene_name": "GOSR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46459-1", "protein_name": "Vesicle-fusing ATPase", "gene_name": "NSF", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15027-1", "protein_name": "Protein transport protein Sec16A", "gene_name": "SEC16A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0U4-1", "protein_name": "Ras-related protein Rab-1B", "gene_name": "RAB1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00451-1", "protein_name": "Coagulation factor VIII", "gene_name": "F8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08851-1", "protein_name": "Syntaxin-5", "gene_name": "Stx5", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q92734-1", "protein_name": "Protein TFG", "gene_name": "TFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60763-1", "protein_name": "General vesicular transport factor p115", "gene_name": "USO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPN7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 1", "gene_name": "PPP6R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15084-3", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A", "gene_name": "ANKRD28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVM8-1", "protein_name": "Sec1 family domain-containing protein 1", "gene_name": "SCFD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13190-1", "protein_name": "Syntaxin-5", "gene_name": "STX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02388-1", "protein_name": "Collagen alpha-1(VII) chain", "gene_name": "COL7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12259-1", "protein_name": "Coagulation factor V", "gene_name": "F5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15328-1", "protein_name": "Folate receptor alpha", "gene_name": "FOLR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62820-1", "protein_name": "Ras-related protein Rab-1A", "gene_name": "RAB1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53992-1", "protein_name": "Protein transport protein Sec24C", "gene_name": "SEC24C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43617-1", "protein_name": "Trafficking protein particle complex subunit 3", "gene_name": "TRAPPC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCU5-1", "protein_name": "Guanine nucleotide-exchange factor SEC12", "gene_name": "PREB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75865-1", "protein_name": "Trafficking protein particle complex subunit 6A", "gene_name": "TRAPPC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Y8-1", "protein_name": "SEC23-interacting protein", "gene_name": "SEC23IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BZ9-1", "protein_name": "TBC1 domain family member 20", "gene_name": "TBC1D20", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15155-1", "protein_name": "BET1 homolog", "gene_name": "BET1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13987-1", "protein_name": "CD59 glycoprotein", "gene_name": "CD59", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15436-1", "protein_name": "Protein transport protein Sec23A", "gene_name": "SEC23A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15363-1", "protein_name": "Transmembrane emp24 domain-containing protein 2", "gene_name": "TMED2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL33-1", "protein_name": "Trafficking protein particle complex subunit 2-like protein", "gene_name": "TRAPPC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48730-1", "protein_name": "Casein kinase I isoform delta", "gene_name": "CSNK1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94855-1", "protein_name": "Protein transport protein Sec24D", "gene_name": "SEC24D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DI81-1", "protein_name": "Trafficking protein particle complex subunit 2", "gene_name": "TRAPPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRL7-1", "protein_name": "Vesicle-trafficking protein SEC22c", "gene_name": "SEC22C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95486-1", "protein_name": "Protein transport protein Sec24A", "gene_name": "SEC24A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SZ2-1", "protein_name": "Trafficking protein particle complex subunit 6B", "gene_name": "TRAPPC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08379-1", "protein_name": "Golgin subfamily A member 2", "gene_name": "GOLGA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQQ3-1", "protein_name": "Golgi reassembly-stacking protein 1", "gene_name": "GORASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01009-1", "protein_name": "Alpha-1-antitrypsin", "gene_name": "SERPINA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96Q05", "url": "https://www.uniprot.org/uniprotkb/Q96Q05" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9307973", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 70 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { 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"gene_name": "TRAPPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15498-1", "protein_name": "Synaptobrevin homolog YKT6", "gene_name": "YKT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y296-1", "protein_name": "Trafficking protein particle complex subunit 4", "gene_name": "TRAPPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQW1-1", "protein_name": "Protein transport protein Sec31B", "gene_name": "SEC31B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00743-1", "protein_name": "Serine/threonine-protein phosphatase 6 catalytic subunit", "gene_name": "PPP6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9R7-1", "protein_name": "Serine/threonine-protein phosphatase 6 regulatory subunit 3", "gene_name": "PPP6R3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H115-1", "protein_name": "Beta-soluble NSF attachment protein", "gene_name": "NAPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15514-1", "protein_name": "Amphiregulin", "gene_name": "AREG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49257-1", "protein_name": "Protein ERGIC-53", "gene_name": "LMAN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42261-1", "protein_name": "Glutamate receptor 1", "gene_name": "GRIA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR2-1", "protein_name": "Cathepsin Z", "gene_name": "CTSZ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95406-1", "protein_name": "Protein cornichon homolog 1", "gene_name": "CNIH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54920-1", "protein_name": "Alpha-soluble NSF attachment protein", "gene_name": "NAPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94979-1", "protein_name": "Protein transport protein Sec31A", "gene_name": "SEC31A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48553-1", "protein_name": "Trafficking protein particle complex subunit 10", "gene_name": "TRAPPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55735-1", 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}, { "uniprot_canonical_ac": "Q96IW7-1", "protein_name": "Vesicle-trafficking protein SEC22a", "gene_name": "SEC22A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUR0-1", "protein_name": "Trafficking protein particle complex subunit 5", "gene_name": "TRAPPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PI25-1", "protein_name": "Protein cornichon homolog 2", "gene_name": "CNIH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBE1-1", "protein_name": "Protein cornichon homolog 3", "gene_name": "CNIH3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAT1-1", "protein_name": "Protein ERGIC-53-like", "gene_name": "LMAN1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0V9-1", "protein_name": "VIP36-like protein", "gene_name": "LMAN2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12907-1", "protein_name": "Vesicular integral-membrane protein VIP36", "gene_name": "LMAN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NI22-1", "protein_name": 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Genet.", "date": "2003", "authors": "Ye X, Xu J, Cheng C, Yin G, Zeng L, Ji C, Gu S, Xie Y, Mao Y", "reference": { "type": "PubMed", "id": "12670026", "url": "https://pubmed.ncbi.nlm.nih.gov/12670026" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96NB2-1", "protein_name": "Sideroflexin-2", "gene_name": "SFXN2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96NB2", "url": "https://www.uniprot.org/uniprotkb/Q96NB2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12670026", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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Cell Sci.", "date": "2001", "authors": "Seipel K, O'Brien S P, Iannotti E, Medley Q G, Streuli M", "reference": { "type": "PubMed", "id": "11148140", "url": "https://pubmed.ncbi.nlm.nih.gov/11148140" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9H2D6-1", "protein_name": "TRIO and F-actin-binding protein", "gene_name": "TRIOBP", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9H2D6", "url": "https://www.uniprot.org/uniprotkb/Q9H2D6" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11148140", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mutations in TRIOBP, which encodes a putative cytoskeletal-organizing protein, are associated with nonsyndromic recessive deafness.", "journal": "Am. J. Hum. Genet.", "date": "2006", "authors": "Riazuddin Saima, Khan Shaheen N, Ahmed Zubair M, Ghosh Manju, Caution Kyle, Nazli Sabiha, Kabra Madhulika, Zafar Ahmad U, Chen Kevin, Naz Sadaf, Antonellis Anthony, Pavan William J, Green Eric D, Wilcox Edward R, Friedman Penelope L, Morell Robert J, Riazuddin Sheikh, Friedman Thomas B", "reference": { "type": "PubMed", "id": "16385457", "url": "https://pubmed.ncbi.nlm.nih.gov/16385457" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9H2D6-1", "protein_name": "TRIO and F-actin-binding protein", "gene_name": "TRIOBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99KW3-3", "protein_name": "TRIO and F-actin-binding protein", "gene_name": "Triobp", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9H2D6", "url": "https://www.uniprot.org/uniprotkb/Q9H2D6" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo 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"count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mutations in a novel isoform of TRIOBP that encodes a filamentous-actin binding protein are responsible for DFNB28 recessive nonsyndromic hearing loss.", "journal": "American journal of human genetics", "date": "2006", "authors": "Shahin H, Walsh T, Sobe T, Abu Sa'ed J, Abu Rayan A, Lynch ED, Lee MK, Avraham KB, King MC, Kanaan M", "reference": { "type": "PubMed", "id": "16385458", "url": "https://pubmed.ncbi.nlm.nih.gov/16385458" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9H2D6-1", "protein_name": "TRIO and F-actin-binding protein", "gene_name": "TRIOBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99KW3-3", "protein_name": "TRIO and F-actin-binding protein", "gene_name": "Triobp", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9H2D6", "url": "https://www.uniprot.org/uniprotkb/Q9H2D6" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16385458", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { 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immunology", "date": "2020", "authors": "Podaza Enrique, Carri Ibel, Aris Mariana, von Euw Erika, Bravo Alicia In\u00e9s, Blanco Paula, Ortiz Wilczy\u00f1ski Juan Manuel, Koile Daniel, Yankilevich Patricio, Nielsen Morten, Mordoh Jos\u00e9, Barrio Mar\u00eda Marcela", "reference": { "type": "PubMed", "id": "32582212", "url": "https://pubmed.ncbi.nlm.nih.gov/32582212" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9H2D6-1", "protein_name": "TRIO and F-actin-binding protein", "gene_name": "TRIOBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56693-1", "protein_name": "Transcription factor SOX-10", "gene_name": "SOX10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q04609-1", "protein_name": "Glutamate carboxypeptidase 2", "gene_name": "FOLH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48431-1", "protein_name": "Transcription factor SOX-2", "gene_name": "SOX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57729-1", 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"field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "SYMPTOM SEVERITY IN SCHIZOPHRENIA PATIENTS WITH NPAS3, DYSBINDIN-1 AND/OR TRIOBP PROTEIN PATHOLOGY IN THEIR BLOOD SERUM: A PANSS-BASED FOLLOW UP STUDY.", "journal": 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"PubMed", "id": "11278853", "url": "https://pubmed.ncbi.nlm.nih.gov/11278853" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8IYJ3-1", "protein_name": "Synaptotagmin-like protein 1", "gene_name": "SYTL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19878-1", "protein_name": "Neutrophil cytosol factor 2", "gene_name": "NCF2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8IYJ3", "url": "https://www.uniprot.org/uniprotkb/Q8IYJ3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11278853", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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"Q4VX76-1", "protein_name": "Synaptotagmin-like protein 3", "gene_name": "SYTL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9CQD1-1", "protein_name": "Ras-related protein Rab-5A", "gene_name": "Rab5a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q96C24-1", "protein_name": "Synaptotagmin-like protein 4", "gene_name": "SYTL4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ERI2-1", "protein_name": "Ras-related protein Rab-27A", "gene_name": "Rab27a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9R0Q1-1", "protein_name": "Synaptotagmin-like protein 4", "gene_name": "Sytl4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q99N80-1", "protein_name": "Synaptotagmin-like protein 1", "gene_name": "Sytl1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q99N48-1", "protein_name": "Synaptotagmin-like protein 3", "gene_name": "Sytl3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q99N50-1", "protein_name": "Synaptotagmin-like protein 2", "gene_name": "Sytl2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8NEV8-1", "protein_name": "Exophilin-5", "gene_name": "EXPH5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q0VAV2-1", "protein_name": "Exophilin-5", "gene_name": "Exph5", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8IYJ3", "url": "https://www.uniprot.org/uniprotkb/Q8IYJ3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11773082", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 11 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", 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"count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "JFC1 is transcriptionally activated by nuclear factor-kappaB and up-regulated by tumour necrosis factor alpha in prostate carcinoma cells.", "journal": "The Biochemical journal", "date": "2002", "authors": "Catz SD, Babior BM, Johnson JL", "reference": { "type": "PubMed", "id": "12137562", "url": "https://pubmed.ncbi.nlm.nih.gov/12137562" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8IYJ3-1", "protein_name": "Synaptotagmin-like protein 1", "gene_name": "SYTL1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8IYJ3", "url": 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"sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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the Rab27a-binding protein JFC1 by phosphorylation.", "journal": "Traffic (Copenhagen, Denmark)", "date": "2005", "authors": "Johnson JL, Pacquelet S, Lane WS, Eam B, Catz SD", "reference": { "type": "PubMed", "id": "15998322", "url": "https://pubmed.ncbi.nlm.nih.gov/15998322" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8IYJ3-1", "protein_name": "Synaptotagmin-like protein 1", "gene_name": "SYTL1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8IYJ3", "url": "https://www.uniprot.org/uniprotkb/Q8IYJ3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 241, "end_pos": 241, "kinase_uniprot_canonical_ac": "P31749-1", "kinase_gene_name": "AKT1", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q8IYJ3", "url": 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kinase Chk2", "gene_name": "CHEK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y478-1", "protein_name": "5'-AMP-activated protein kinase subunit beta-1", "gene_name": "PRKAB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13315-1", "protein_name": "Serine-protein kinase ATM", "gene_name": "ATM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q7Z7C8", "url": "https://www.uniprot.org/uniprotkb/Q7Z7C8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 159, "end_pos": 159, "kinase_uniprot_canonical_ac": "P48730-1", "kinase_gene_name": "CSNK1D", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q00535", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q00535" }, { "database": "PubMed", "id": "10500146", "url": "https://pubmed.ncbi.nlm.nih.gov/10500146" } ], "site_lbl": "Ser159", "uniprot_canonical_ac": "Q00535-1" }, { "start_pos": 159, "end_pos": 159, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine", "evidence": [ { "database": "UniProtKB", "id": "Q00535", "url": "https://www.uniprot.org/uniprotkb/Q00535" }, { "database": "PubMed", "id": "10500146", "url": "https://pubmed.ncbi.nlm.nih.gov/10500146" }, { "database": "PRO", "id": "Q00535", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=Q00535" }, { "database": "iPTMnet", "id": "Q00535", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q00535" }, { "database": "PubMed", "id": "24498195", "url": "https://pubmed.ncbi.nlm.nih.gov/24498195" }, { "database": "PubMed", "id": "26806339", "url": "https://pubmed.ncbi.nlm.nih.gov/26806339" }, { "database": "PubMed", "id": "29095844", "url": "https://pubmed.ncbi.nlm.nih.gov/29095844" } ], "site_lbl": "Ser159", "uniprot_canonical_ac": "Q00535-1" } ], "record_id": "pubmed.10500146", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 93 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Phosphorylation of Ser-20 mediates stabilization of human p53 in response to DNA damage.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "1999", "authors": "Chehab NH, Malikzay A, Stavridi ES, Halazonetis TD", "reference": { "type": "PubMed", "id": "10570149", "url": "https://pubmed.ncbi.nlm.nih.gov/10570149" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7Z7C8-1", "protein_name": "Transcription initiation factor TFIID subunit 8", "gene_name": "TAF8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15544-1", "protein_name": "Transcription initiation factor TFIID subunit 11", "gene_name": "TAF11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92547-1", "protein_name": "DNA topoisomerase 2-binding protein 1", "gene_name": "TOPBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14965-1", "protein_name": "Aurora kinase A", "gene_name": "AURKA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16539-1", "protein_name": "Mitogen-activated protein kinase 14", "gene_name": "MAPK14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20248-1", "protein_name": "Cyclin-A2", "gene_name": "CCNA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92993-1", "protein_name": "Histone acetyltransferase KAT5", "gene_name": "KAT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96E14-1", "protein_name": "RecQ-mediated genome instability protein 2", "gene_name": "RMI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75943-1", "protein_name": "Cell cycle checkpoint protein RAD17", "gene_name": "RAD17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BSD3-1", "protein_name": "RAD9, HUS1, RAD1-interacting nuclear orphan protein 1", "gene_name": "RHNO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VWG9-1", "protein_name": "Transcription initiation factor TFIID subunit 3", "gene_name": "TAF3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IW41-1", "protein_name": "MAP kinase-activated protein kinase 5", "gene_name": "MAPKAPK5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08945-1", "protein_name": "FACT complex subunit SSRP1", "gene_name": "SSRP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19784-1", "protein_name": "Casein kinase II subunit alpha'", "gene_name": "CSNK2A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16594-1", "protein_name": "Transcription initiation factor TFIID subunit 9", "gene_name": "TAF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15543-1", "protein_name": "Transcription initiation factor TFIID subunit 13", "gene_name": "TAF13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B4-1", "protein_name": "Serine/threonine-protein kinase PLK3", "gene_name": "PLK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35249-1", "protein_name": "Replication factor C subunit 4", "gene_name": "RFC4", "tax_name": "Human" }, { 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"gene_name": "DYRK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15831-1", "protein_name": "Serine/threonine-protein kinase STK11", "gene_name": "STK11", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14757-1", "protein_name": "Serine/threonine-protein kinase Chk1", "gene_name": "CHEK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96GD4-1", "protein_name": "Aurora kinase B", "gene_name": "AURKB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UGI9-1", "protein_name": "5'-AMP-activated protein kinase subunit gamma-3", "gene_name": "PRKAG3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15927-1", "protein_name": "Replication protein A 32 kDa subunit", "gene_name": "RPA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40938-1", "protein_name": "Replication factor C subunit 3", "gene_name": "RFC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49959-1", "protein_name": "Double-strand break repair protein MRE11", "gene_name": "MRE11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UQ84-1", "protein_name": "Exonuclease 1", "gene_name": "EXO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86Z02-1", "protein_name": "Homeodomain-interacting protein kinase 1", "gene_name": "HIPK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92804-1", "protein_name": "TATA-binding protein-associated factor 2N", "gene_name": "TAF15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99728-1", "protein_name": "BRCA1-associated RING domain protein 1", "gene_name": "BARD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00535-1", "protein_name": "Cyclin-dependent kinase 5", "gene_name": "CDK5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99708-1", "protein_name": "DNA endonuclease RBBP8", "gene_name": "RBBP8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BX63-1", "protein_name": "Fanconi anemia group J protein", "gene_name": "BRIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96S44-1", "protein_name": "EKC/KEOPS complex subunit TP53RK", "gene_name": "TP53RK", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40937-1", "protein_name": "Replication factor C subunit 5", "gene_name": "RFC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6WBX8-5", "protein_name": "Cell cycle checkpoint control protein RAD9B", "gene_name": "RAD9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16514-1", "protein_name": "Transcription initiation factor TFIID subunit 12", "gene_name": "TAF12", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21675-2", "protein_name": "Transcription initiation factor TFIID subunit 1", "gene_name": "TAF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZX4-1", "protein_name": "Transcription initiation factor TFIID subunit 1-like", "gene_name": "TAF1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBM6-1", "protein_name": "Transcription initiation factor TFIID subunit 9B", "gene_name": "TAF9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92878-1", "protein_name": "DNA repair protein RAD50", "gene_name": "RAD50", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12962-1", "protein_name": "Transcription initiation factor TFIID subunit 10", "gene_name": "TAF10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3T9-1", "protein_name": "Nucleolar complex protein 2 homolog", "gene_name": "NOC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68400-1", "protein_name": "Casein kinase II subunit alpha", "gene_name": "CSNK2A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67870-1", "protein_name": "Casein kinase II subunit beta", "gene_name": "CSNK2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24941-1", "protein_name": "Cyclin-dependent kinase 2", "gene_name": "CDK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": 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"gene_name": "MAPK11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15542-1", "protein_name": "Transcription initiation factor TFIID subunit 5", "gene_name": "TAF5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9L4-1", "protein_name": "Transcription initiation factor TFIID subunit 7-like", "gene_name": "TAF7L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15545-1", "protein_name": "Transcription initiation factor TFIID subunit 7", "gene_name": "TAF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13526-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1", "gene_name": "PIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38398-1", "protein_name": "Breast cancer type 1 susceptibility protein", "gene_name": "BRCA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15151-1", "protein_name": "Protein Mdm4", "gene_name": "MDM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54619-1", "protein_name": "5'-AMP-activated protein 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"gene_name": "TAF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZX4-1", "protein_name": "Transcription initiation factor TFIID subunit 1-like", "gene_name": "TAF1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBM6-1", "protein_name": "Transcription initiation factor TFIID subunit 9B", "gene_name": "TAF9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92878-1", "protein_name": "DNA repair protein RAD50", "gene_name": "RAD50", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12962-1", "protein_name": "Transcription initiation factor TFIID subunit 10", "gene_name": "TAF10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3T9-1", "protein_name": "Nucleolar complex protein 2 homolog", "gene_name": "NOC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68400-1", "protein_name": "Casein kinase II subunit alpha", "gene_name": "CSNK2A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67870-1", "protein_name": "Casein kinase II subunit beta", "gene_name": "CSNK2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24941-1", "protein_name": "Cyclin-dependent kinase 2", "gene_name": "CDK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A56-1", "protein_name": "Tumor protein p53-inducible nuclear protein 1", "gene_name": "TP53INP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60921-1", "protein_name": "Checkpoint protein HUS1", "gene_name": "HUS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60671-1", "protein_name": "Cell cycle checkpoint protein RAD1", "gene_name": "RAD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99638-1", "protein_name": "Cell cycle checkpoint control protein RAD9A", "gene_name": "RAD9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5B9-1", "protein_name": "FACT complex subunit SPT16", "gene_name": "SUPT16H", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15759-1", "protein_name": "Mitogen-activated protein kinase 11", "gene_name": "MAPK11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15542-1", "protein_name": "Transcription initiation factor TFIID subunit 5", "gene_name": "TAF5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9L4-1", "protein_name": "Transcription initiation factor TFIID subunit 7-like", "gene_name": "TAF7L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15545-1", "protein_name": "Transcription initiation factor TFIID subunit 7", "gene_name": "TAF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13526-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1", "gene_name": "PIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38398-1", "protein_name": "Breast cancer type 1 susceptibility protein", "gene_name": "BRCA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15151-1", "protein_name": "Protein Mdm4", "gene_name": "MDM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54619-1", "protein_name": "5'-AMP-activated protein kinase subunit gamma-1", "gene_name": "PRKAG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43741-1", "protein_name": "5'-AMP-activated protein kinase subunit beta-2", "gene_name": "PRKAB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13131-1", "protein_name": "5'-AMP-activated protein kinase catalytic subunit alpha-1", "gene_name": "PRKAA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54646-1", "protein_name": "5'-AMP-activated protein kinase catalytic subunit alpha-2", "gene_name": "PRKAA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UGJ0-1", "protein_name": "5'-AMP-activated protein kinase subunit gamma-2", "gene_name": "PRKAG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96017-1", "protein_name": "Serine/threonine-protein kinase Chk2", "gene_name": "CHEK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y478-1", "protein_name": "5'-AMP-activated protein kinase subunit beta-1", "gene_name": "PRKAB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13315-1", "protein_name": "Serine-protein kinase ATM", "gene_name": "ATM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02340-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "Tp53; Trp53", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O88904-1", "protein_name": "Homeodomain-interacting protein kinase 1", "gene_name": "Hipk1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q7Z7C8", "url": "https://www.uniprot.org/uniprotkb/Q7Z7C8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12702766", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 95 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "TP53INP1s and homeodomain-interacting protein kinase-2 (HIPK2) are partners in regulating p53 activity.", "journal": "The Journal of biological chemistry", "date": "2003", "authors": "Tomasini R, Samir AA, Carrier A, Isnardon D, Cecchinelli B, Soddu S, Malissen B, Dagorn JC, Iovanna JL, Dusetti NJ", "reference": { "type": "PubMed", "id": "12851404", "url": "https://pubmed.ncbi.nlm.nih.gov/12851404" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7Z7C8-1", "protein_name": "Transcription initiation factor TFIID subunit 8", "gene_name": "TAF8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15544-1", "protein_name": "Transcription initiation factor TFIID subunit 11", "gene_name": "TAF11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92547-1", "protein_name": "DNA topoisomerase 2-binding protein 1", "gene_name": "TOPBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14965-1", "protein_name": "Aurora kinase A", "gene_name": "AURKA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16539-1", "protein_name": "Mitogen-activated protein kinase 14", "gene_name": "MAPK14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20248-1", "protein_name": "Cyclin-A2", "gene_name": "CCNA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92993-1", "protein_name": "Histone acetyltransferase KAT5", "gene_name": "KAT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96E14-1", "protein_name": "RecQ-mediated genome instability protein 2", "gene_name": "RMI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75943-1", "protein_name": "Cell cycle checkpoint protein RAD17", "gene_name": "RAD17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BSD3-1", "protein_name": "RAD9, HUS1, RAD1-interacting nuclear orphan protein 1", "gene_name": "RHNO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VWG9-1", "protein_name": "Transcription initiation factor TFIID subunit 3", "gene_name": "TAF3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IW41-1", "protein_name": "MAP kinase-activated protein kinase 5", "gene_name": "MAPKAPK5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08945-1", "protein_name": "FACT complex subunit SSRP1", "gene_name": "SSRP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19784-1", "protein_name": "Casein kinase II subunit alpha'", "gene_name": "CSNK2A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16594-1", "protein_name": "Transcription initiation factor TFIID subunit 9", "gene_name": "TAF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15543-1", "protein_name": "Transcription initiation factor TFIID subunit 13", "gene_name": "TAF13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B4-1", "protein_name": "Serine/threonine-protein kinase PLK3", "gene_name": "PLK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35249-1", "protein_name": "Replication factor C subunit 4", "gene_name": "RFC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35244-1", "protein_name": "Replication protein A 14 kDa subunit", "gene_name": "RPA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13472-1", "protein_name": "DNA topoisomerase 3-alpha", "gene_name": "TOP3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60934-1", "protein_name": "Nibrin", "gene_name": "NBN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULW0-1", "protein_name": "Targeting protein for Xklp2", "gene_name": "TPX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15078-1", "protein_name": "Cyclin-dependent kinase 5 activator 1", "gene_name": "CDK5R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51530-1", "protein_name": "DNA replication ATP-dependent helicase/nuclease DNA2", "gene_name": "DNA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXE1-1", "protein_name": "ATR-interacting protein", "gene_name": "ATRIP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27694-1", "protein_name": "Replication protein A 70 kDa DNA-binding subunit", "gene_name": "RPA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54132-1", "protein_name": "RecQ-like DNA helicase BLM", "gene_name": "BLM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13535-1", "protein_name": "Serine/threonine-protein kinase ATR", "gene_name": "ATR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14191-1", "protein_name": "Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN", "gene_name": "WRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78396-1", "protein_name": "Cyclin-A1", "gene_name": "CCNA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9A7-1", "protein_name": "RecQ-mediated genome instability protein 1", "gene_name": "RMI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2X6-1", "protein_name": "Homeodomain-interacting protein kinase 2", "gene_name": "HIPK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60285-1", "protein_name": "NUAK family SNF1-like kinase 1", "gene_name": "NUAK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35250-1", "protein_name": "Replication factor C subunit 2", "gene_name": "RFC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92750-1", "protein_name": "Transcription initiation factor TFIID subunit 4B", "gene_name": "TAF4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49848-1", "protein_name": "Transcription initiation factor TFIID subunit 6", "gene_name": "TAF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P1X5-1", "protein_name": "Transcription initiation factor TFIID subunit 2", "gene_name": "TAF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00268-1", "protein_name": "Transcription initiation factor TFIID subunit 4", "gene_name": "TAF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20226-1", "protein_name": "TATA-box-binding protein", "gene_name": "TBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92630-1", "protein_name": "Dual specificity tyrosine-phosphorylation-regulated kinase 2", "gene_name": "DYRK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15831-1", "protein_name": "Serine/threonine-protein kinase STK11", "gene_name": "STK11", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14757-1", "protein_name": "Serine/threonine-protein kinase Chk1", "gene_name": "CHEK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96GD4-1", "protein_name": "Aurora kinase B", "gene_name": "AURKB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UGI9-1", "protein_name": "5'-AMP-activated protein kinase subunit gamma-3", "gene_name": "PRKAG3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15927-1", "protein_name": "Replication protein A 32 kDa subunit", "gene_name": "RPA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40938-1", "protein_name": "Replication factor C subunit 3", "gene_name": "RFC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49959-1", "protein_name": "Double-strand break repair protein MRE11", "gene_name": "MRE11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UQ84-1", "protein_name": "Exonuclease 1", "gene_name": "EXO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86Z02-1", "protein_name": "Homeodomain-interacting protein kinase 1", "gene_name": "HIPK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92804-1", "protein_name": "TATA-binding protein-associated factor 2N", "gene_name": "TAF15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99728-1", "protein_name": "BRCA1-associated RING domain protein 1", "gene_name": "BARD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00535-1", "protein_name": "Cyclin-dependent kinase 5", "gene_name": "CDK5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99708-1", "protein_name": "DNA endonuclease RBBP8", "gene_name": "RBBP8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BX63-1", "protein_name": "Fanconi anemia group J protein", "gene_name": "BRIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96S44-1", "protein_name": "EKC/KEOPS complex subunit TP53RK", "gene_name": "TP53RK", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40937-1", "protein_name": "Replication factor C subunit 5", "gene_name": "RFC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6WBX8-5", "protein_name": "Cell cycle checkpoint control protein RAD9B", "gene_name": "RAD9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16514-1", "protein_name": "Transcription initiation factor TFIID subunit 12", "gene_name": "TAF12", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21675-2", "protein_name": "Transcription initiation factor TFIID subunit 1", "gene_name": "TAF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZX4-1", "protein_name": "Transcription initiation factor TFIID subunit 1-like", "gene_name": "TAF1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBM6-1", "protein_name": "Transcription initiation factor TFIID subunit 9B", "gene_name": "TAF9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92878-1", "protein_name": "DNA repair protein RAD50", "gene_name": "RAD50", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12962-1", "protein_name": "Transcription initiation factor TFIID subunit 10", "gene_name": "TAF10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3T9-1", "protein_name": "Nucleolar complex protein 2 homolog", "gene_name": "NOC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68400-1", "protein_name": "Casein kinase II subunit alpha", "gene_name": "CSNK2A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67870-1", "protein_name": "Casein kinase II subunit beta", "gene_name": "CSNK2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24941-1", "protein_name": "Cyclin-dependent kinase 2", "gene_name": "CDK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A56-1", "protein_name": "Tumor protein p53-inducible nuclear protein 1", "gene_name": "TP53INP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60921-1", "protein_name": "Checkpoint protein HUS1", "gene_name": "HUS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60671-1", "protein_name": "Cell cycle checkpoint protein RAD1", "gene_name": "RAD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99638-1", "protein_name": "Cell cycle checkpoint control protein RAD9A", "gene_name": "RAD9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5B9-1", "protein_name": "FACT complex subunit SPT16", "gene_name": "SUPT16H", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15759-1", "protein_name": "Mitogen-activated protein kinase 11", "gene_name": "MAPK11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15542-1", "protein_name": "Transcription initiation factor TFIID subunit 5", "gene_name": "TAF5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9L4-1", "protein_name": "Transcription initiation factor TFIID subunit 7-like", "gene_name": "TAF7L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15545-1", "protein_name": "Transcription initiation factor TFIID subunit 7", "gene_name": "TAF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13526-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1", "gene_name": "PIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38398-1", "protein_name": "Breast cancer type 1 susceptibility protein", "gene_name": "BRCA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15151-1", "protein_name": "Protein Mdm4", "gene_name": "MDM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54619-1", "protein_name": "5'-AMP-activated protein kinase subunit gamma-1", "gene_name": "PRKAG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43741-1", "protein_name": "5'-AMP-activated protein kinase subunit beta-2", "gene_name": "PRKAB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13131-1", "protein_name": "5'-AMP-activated protein kinase catalytic subunit alpha-1", "gene_name": "PRKAA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54646-1", "protein_name": "5'-AMP-activated protein kinase catalytic subunit alpha-2", "gene_name": "PRKAA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UGJ0-1", "protein_name": "5'-AMP-activated protein kinase subunit gamma-2", "gene_name": "PRKAG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96017-1", "protein_name": "Serine/threonine-protein kinase Chk2", "gene_name": "CHEK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y478-1", "protein_name": "5'-AMP-activated protein kinase subunit beta-1", "gene_name": "PRKAB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13315-1", "protein_name": "Serine-protein kinase ATM", "gene_name": "ATM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q7Z7C8", "url": "https://www.uniprot.org/uniprotkb/Q7Z7C8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12851404", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 93 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Functional homology between yeast piD261/Bud32 and human PRPK: both phosphorylate p53 and PRPK partially complements piD261/Bud32 deficiency.", "journal": "FEBS letters", "date": "2003", "authors": "Facchin S, Lopreiato R, Ruzzene M, Marin O, Sartori G, Gotz C, Montenarh M, Carignani G, Pinna LA", "reference": { "type": "PubMed", "id": "12914926", "url": "https://pubmed.ncbi.nlm.nih.gov/12914926" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7Z7C8-1", "protein_name": "Transcription initiation factor TFIID subunit 8", "gene_name": "TAF8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15544-1", "protein_name": "Transcription initiation factor TFIID subunit 11", "gene_name": "TAF11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92547-1", "protein_name": "DNA topoisomerase 2-binding protein 1", "gene_name": "TOPBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14965-1", "protein_name": "Aurora kinase A", "gene_name": "AURKA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16539-1", "protein_name": "Mitogen-activated protein kinase 14", "gene_name": "MAPK14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20248-1", "protein_name": "Cyclin-A2", "gene_name": "CCNA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92993-1", "protein_name": "Histone acetyltransferase KAT5", "gene_name": "KAT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96E14-1", "protein_name": "RecQ-mediated genome instability protein 2", "gene_name": "RMI2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75943-1", "protein_name": "Cell cycle checkpoint protein RAD17", "gene_name": "RAD17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BSD3-1", "protein_name": "RAD9, HUS1, RAD1-interacting nuclear orphan protein 1", "gene_name": "RHNO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VWG9-1", "protein_name": "Transcription initiation factor TFIID subunit 3", "gene_name": "TAF3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IW41-1", "protein_name": "MAP kinase-activated protein kinase 5", "gene_name": "MAPKAPK5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08945-1", "protein_name": "FACT complex subunit SSRP1", "gene_name": "SSRP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19784-1", "protein_name": "Casein kinase II subunit alpha'", "gene_name": "CSNK2A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16594-1", "protein_name": "Transcription initiation factor TFIID subunit 9", "gene_name": "TAF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15543-1", "protein_name": "Transcription initiation factor TFIID subunit 13", "gene_name": "TAF13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H4B4-1", "protein_name": "Serine/threonine-protein kinase PLK3", "gene_name": "PLK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35249-1", "protein_name": "Replication factor C subunit 4", "gene_name": "RFC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35244-1", "protein_name": "Replication protein A 14 kDa subunit", "gene_name": "RPA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13472-1", "protein_name": "DNA topoisomerase 3-alpha", "gene_name": "TOP3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60934-1", "protein_name": "Nibrin", "gene_name": "NBN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULW0-1", "protein_name": "Targeting protein for Xklp2", "gene_name": "TPX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15078-1", "protein_name": "Cyclin-dependent kinase 5 activator 1", "gene_name": "CDK5R1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51530-1", "protein_name": "DNA replication ATP-dependent helicase/nuclease DNA2", "gene_name": "DNA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXE1-1", "protein_name": "ATR-interacting protein", "gene_name": "ATRIP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27694-1", "protein_name": "Replication protein A 70 kDa DNA-binding subunit", "gene_name": "RPA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54132-1", "protein_name": "RecQ-like DNA helicase BLM", "gene_name": "BLM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13535-1", "protein_name": "Serine/threonine-protein kinase ATR", "gene_name": "ATR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14191-1", "protein_name": "Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN", "gene_name": "WRN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78396-1", "protein_name": "Cyclin-A1", "gene_name": "CCNA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9A7-1", "protein_name": "RecQ-mediated genome instability protein 1", "gene_name": "RMI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2X6-1", "protein_name": "Homeodomain-interacting protein kinase 2", "gene_name": "HIPK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60285-1", "protein_name": "NUAK family SNF1-like kinase 1", "gene_name": "NUAK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35250-1", "protein_name": "Replication factor C subunit 2", "gene_name": "RFC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92750-1", "protein_name": "Transcription initiation factor TFIID subunit 4B", "gene_name": "TAF4B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49848-1", "protein_name": "Transcription initiation factor TFIID subunit 6", "gene_name": "TAF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P1X5-1", "protein_name": "Transcription initiation factor TFIID subunit 2", "gene_name": "TAF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00268-1", "protein_name": "Transcription initiation factor TFIID subunit 4", "gene_name": "TAF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20226-1", "protein_name": "TATA-box-binding protein", "gene_name": "TBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92630-1", "protein_name": "Dual specificity tyrosine-phosphorylation-regulated kinase 2", "gene_name": "DYRK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15831-1", "protein_name": "Serine/threonine-protein kinase STK11", "gene_name": "STK11", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14757-1", "protein_name": "Serine/threonine-protein kinase Chk1", "gene_name": "CHEK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96GD4-1", "protein_name": "Aurora kinase B", "gene_name": "AURKB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UGI9-1", "protein_name": "5'-AMP-activated protein kinase subunit gamma-3", "gene_name": "PRKAG3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15927-1", "protein_name": "Replication protein A 32 kDa subunit", "gene_name": "RPA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40938-1", "protein_name": "Replication factor C subunit 3", "gene_name": "RFC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49959-1", "protein_name": "Double-strand break repair protein MRE11", "gene_name": "MRE11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UQ84-1", "protein_name": "Exonuclease 1", "gene_name": "EXO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86Z02-1", "protein_name": "Homeodomain-interacting protein kinase 1", "gene_name": "HIPK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92804-1", "protein_name": "TATA-binding protein-associated factor 2N", "gene_name": "TAF15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99728-1", "protein_name": "BRCA1-associated RING domain protein 1", "gene_name": "BARD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00535-1", "protein_name": "Cyclin-dependent kinase 5", "gene_name": "CDK5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99708-1", "protein_name": "DNA endonuclease RBBP8", "gene_name": "RBBP8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BX63-1", "protein_name": "Fanconi anemia group J protein", "gene_name": "BRIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96S44-1", "protein_name": "EKC/KEOPS complex subunit TP53RK", "gene_name": "TP53RK", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40937-1", "protein_name": "Replication factor C subunit 5", "gene_name": "RFC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6WBX8-5", "protein_name": "Cell cycle checkpoint control protein RAD9B", "gene_name": "RAD9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16514-1", "protein_name": "Transcription initiation factor TFIID subunit 12", "gene_name": "TAF12", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21675-2", "protein_name": "Transcription initiation factor TFIID subunit 1", "gene_name": "TAF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZX4-1", "protein_name": "Transcription initiation factor TFIID subunit 1-like", "gene_name": "TAF1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HBM6-1", "protein_name": "Transcription initiation factor TFIID subunit 9B", "gene_name": "TAF9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92878-1", "protein_name": "DNA repair protein RAD50", "gene_name": "RAD50", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12962-1", "protein_name": "Transcription initiation factor TFIID subunit 10", "gene_name": "TAF10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3T9-1", "protein_name": "Nucleolar complex protein 2 homolog", "gene_name": "NOC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68400-1", "protein_name": "Casein kinase II subunit alpha", "gene_name": "CSNK2A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P67870-1", "protein_name": "Casein kinase II subunit beta", "gene_name": "CSNK2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24941-1", "protein_name": "Cyclin-dependent kinase 2", "gene_name": "CDK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A56-1", "protein_name": "Tumor protein p53-inducible nuclear protein 1", "gene_name": "TP53INP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60921-1", "protein_name": "Checkpoint protein HUS1", "gene_name": "HUS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60671-1", "protein_name": "Cell cycle checkpoint protein RAD1", "gene_name": "RAD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99638-1", "protein_name": "Cell cycle checkpoint control protein RAD9A", "gene_name": "RAD9A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5B9-1", "protein_name": "FACT complex subunit SPT16", "gene_name": "SUPT16H", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15759-1", "protein_name": "Mitogen-activated protein kinase 11", "gene_name": "MAPK11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15542-1", "protein_name": "Transcription initiation factor TFIID subunit 5", "gene_name": "TAF5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5H9L4-1", "protein_name": "Transcription initiation factor TFIID subunit 7-like", "gene_name": "TAF7L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15545-1", "protein_name": "Transcription initiation factor TFIID subunit 7", "gene_name": "TAF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13526-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1", "gene_name": "PIN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38398-1", "protein_name": "Breast cancer type 1 susceptibility protein", "gene_name": "BRCA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15151-1", "protein_name": "Protein Mdm4", "gene_name": "MDM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54619-1", "protein_name": "5'-AMP-activated protein kinase subunit gamma-1", "gene_name": "PRKAG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43741-1", "protein_name": "5'-AMP-activated protein kinase subunit beta-2", "gene_name": "PRKAB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13131-1", "protein_name": "5'-AMP-activated protein kinase catalytic subunit alpha-1", "gene_name": "PRKAA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54646-1", "protein_name": "5'-AMP-activated protein kinase catalytic subunit alpha-2", "gene_name": "PRKAA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UGJ0-1", "protein_name": "5'-AMP-activated protein kinase subunit gamma-2", "gene_name": "PRKAG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96017-1", "protein_name": "Serine/threonine-protein kinase Chk2", "gene_name": "CHEK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y478-1", "protein_name": "5'-AMP-activated protein kinase subunit beta-1", "gene_name": "PRKAB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13315-1", "protein_name": "Serine-protein kinase ATM", "gene_name": "ATM", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q7Z7C8", "url": "https://www.uniprot.org/uniprotkb/Q7Z7C8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12914926", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 93 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] } ]