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Biol.", "date": "2000", "authors": "Bantignies F, Goodman R H, Smolik S M", "reference": { "type": "PubMed", "id": "11094082", "url": "https://pubmed.ncbi.nlm.nih.gov/11094082" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9VW15-1", "protein_name": "Histone-lysine N-methyltransferase ash1", "gene_name": "ash1", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "Q9VW15", "url": "https://www.uniprot.org/uniprotkb/Q9VW15" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.11094082", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] 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[7227]" } ], "mutagenesis": [ { "start_pos": 1284, "end_pos": 1284, "sequence_org": "E", "sequence_mut": "K", "comment": "In ash1-21; induces lethality between prepupal and late pupal stages.", "evidence": [ { "database": "UniProtKB", "id": "Q9VW15", "url": "https://www.uniprot.org/uniprotkb/Q9VW15" }, { "database": "PubMed", "id": "8725238", "url": "https://pubmed.ncbi.nlm.nih.gov/8725238" } ], "uniprot_canonical_ac": "Q9VW15-1" }, { "start_pos": 1473, "end_pos": 1473, "sequence_org": "N", "sequence_mut": "I", "comment": "In ash1-10; induces lethality between prepupal and late pupal stages.", "evidence": [ { "database": "UniProtKB", "id": "Q9VW15", "url": "https://www.uniprot.org/uniprotkb/Q9VW15" }, { "database": "PubMed", "id": "8725238", "url": "https://pubmed.ncbi.nlm.nih.gov/8725238" } ], "uniprot_canonical_ac": "Q9VW15-1" } ], "record_id": "pubmed.8725238", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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and antagonist.", "journal": "Molecular and cellular biology", "date": "1995", "authors": "Yin JC, Wallach JS, Wilder EL, Klingensmith J, Dang D, Perrimon N, Zhou H, Tully T, Quinn WG", "reference": { "type": "PubMed", "id": "7651429", "url": "https://pubmed.ncbi.nlm.nih.gov/7651429" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9VWW0-3", "protein_name": "Cyclic AMP response element-binding protein B", "gene_name": "CrebB", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "Q9VWW0", "url": "https://www.uniprot.org/uniprotkb/Q9VWW0" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "mutagenesis": [ { "start_pos": 300, "end_pos": 300, "sequence_org": "L", "sequence_mut": "V", "comment": "Fails to block PKA-dependent activation by isoform E; in isoform G.", "evidence": [ { "database": 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"journal": "Current biology : CB", "date": "2001-10-16", "authors": "Garner M, van Kreeveld S, Su T T", "reference": { "type": "PubMed", "id": "11676920", "url": "https://pubmed.ncbi.nlm.nih.gov/11676920" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9VXG8-1", "protein_name": "Serine/threonine-protein kinase ATR", "gene_name": "mei-41", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "Q9VXG8", "url": "https://www.uniprot.org/uniprotkb/Q9VXG8" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.11676920", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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Cell. Biol.", "date": "2004", "authors": "Mohrmann Lisette, Langenberg Karin, Krijgsveld Jeroen, Kal Arnoud J, Heck Albert J R, Verrijzer C Peter", "reference": { "type": "PubMed", "id": "15060132", "url": "https://pubmed.ncbi.nlm.nih.gov/15060132" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9VYG2-1", "protein_name": "Brahma-associated protein of 60 kDa", "gene_name": "Bap60", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "Q9VYG2", "url": "https://www.uniprot.org/uniprotkb/Q9VYG2" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.15060132", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A genome-scale protein interaction profile of Drosophila p53 uncovers additional nodes of the human p53 network.", "journal": "Proc. 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U.S.A.", "date": "2010", "authors": "Lunardi Andrea, Di Minin Giulio, Provero Paolo, Dal Ferro Marco, Carotti Marcello, Del Sal Giannino, Collavin Licio", "reference": { "type": "PubMed", "id": "20308539", "url": "https://pubmed.ncbi.nlm.nih.gov/20308539" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9VYG2-1", "protein_name": "Brahma-associated protein of 60 kDa", "gene_name": "Bap60", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9BZE4-1", "protein_name": "GTP-binding protein 4", "gene_name": "GTPBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9V411-1", "protein_name": "Nucleolar GTP-binding protein 1", "gene_name": "Non1", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "Q9VYG2", "url": "https://www.uniprot.org/uniprotkb/Q9VYG2" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster 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from Drosophila melanogaster, CYP4G15, expressed in the nervous system.", "journal": "Biochemical and biophysical research communications", "date": "2000-07-14", "authors": "Ma\u00efb\u00e8che-Coisne M, Monti-Dedieu L, Aragon S, Dauphin-Villemant C", "reference": { "type": "PubMed", "id": "10891384", "url": "https://pubmed.ncbi.nlm.nih.gov/10891384" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9VYY4-1", "protein_name": "Cytochrome P450 4g15", "gene_name": "Cyp4g15", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "Q9VYY4", "url": "https://www.uniprot.org/uniprotkb/Q9VYY4" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.10891384", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Drosophila CG3303 is an essential endoribonuclease linked to TDP-43-mediated neurodegeneration.", "journal": "Scientific reports", "date": "2017-01-31", "authors": "Laneve Pietro, Piacentini Lucia, Casale Assunta Maria, Capauto Davide, Gioia Ubaldo, Cappucci Ugo, Di Carlo Valerio, Bozzoni Irene, Di Micco Patrizio, Morea Veronica, Di Franco Carmela Antonia, Caffarelli Elisa", "reference": { "type": "PubMed", "id": "28139767", "url": "https://pubmed.ncbi.nlm.nih.gov/28139767" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9VZ49-1", "protein_name": "Endoribonuclease Arlr", "gene_name": "Arlr", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9VF14-1", "protein_name": "Uridylate-specific endoribonuclease EndoU", "gene_name": "EndoU", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "Q9VZ49", "url": 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single T cell receptor upon T cell activation.", "journal": "Journal of immunology (Baltimore, Md. : 1950)", "date": "2001-07-15", "authors": "Amrani A, Serra P, Yamanouchi J, Trudeau J D, Tan R, Elliott J F, Santamaria P", "reference": { "type": "PubMed", "id": "11441068", "url": "https://pubmed.ncbi.nlm.nih.gov/11441068" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9VZH2-1", "protein_name": "Protein masquerade", "gene_name": "mas", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "Q9VZH2", "url": "https://www.uniprot.org/uniprotkb/Q9VZH2" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.11441068", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Masquerade: a novel secreted serine protease-like molecule is required for somatic muscle attachment in the Drosophila embryo.", "journal": "Genes & development", "date": "1995", "authors": "Murugasu-Oei B, Rodrigues V, Yang X, Chia W", "reference": { "type": "PubMed", "id": "7851790", "url": "https://pubmed.ncbi.nlm.nih.gov/7851790" }, "referenced_glycans": [], "referenced_proteins": [ { 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"date": "2013", "authors": "Abdallah AM, Zhou X, Kim C, Shah KK, Hogden C, Schoenherr JA, Clemens JC, Chang HC", "reference": { "type": "PubMed", "id": "23562806", "url": "https://pubmed.ncbi.nlm.nih.gov/23562806" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9VZI2-1", "protein_name": "Activated Cdc42 kinase Ack", "gene_name": "Ack", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "Q9VZI2", "url": "https://www.uniprot.org/uniprotkb/Q9VZI2" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "mutagenesis": [ { "start_pos": 156, "end_pos": 156, "sequence_org": "K", "sequence_mut": "A", "comment": "Loss of enzyme activity. Increase in apoptotic cells in the eye and wing. Increase in bristle number in the interommatidial lattice and decrease in pigment cell number. Disrupts vesicular localization of dock in spermatocytes. Fails to rescue the nurse cell plasma membrane defects and male sterility observed in null mutants. 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Res.", "date": "1987", "authors": "Flavell A J, Dyson J, Ish-Horowicz D", "reference": { "type": "PubMed", "id": "2884623", "url": "https://pubmed.ncbi.nlm.nih.gov/2884623" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9W1V3-1", "protein_name": "rRNA 2'-O-methyltransferase fibrillarin", "gene_name": "Fib", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "Q9W1V3", "url": "https://www.uniprot.org/uniprotkb/Q9W1V3" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.2884623", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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Mol. Biol.", "date": "2006", "authors": "Cordier Florence, Hartmann Britta, Rogowski Marco, Affolter Markus, Grzesiek Stephan", "reference": { "type": "PubMed", "id": "16876822", "url": "https://pubmed.ncbi.nlm.nih.gov/16876822" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9XTN4-1", "protein_name": "Brinker", "gene_name": "brk", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "Q9XTN4", "url": "https://www.uniprot.org/uniprotkb/Q9XTN4" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.16876822", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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Biol. 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pathways.", "journal": "Development (Cambridge, England)", "date": "2004-05", "authors": "Bornemann Douglas J, Duncan Jason E, Staatz William, Selleck Scott, Warrior Rahul", "reference": { "type": "PubMed", "id": "15056609", "url": "https://pubmed.ncbi.nlm.nih.gov/15056609" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9XZ08-1", "protein_name": "Exostosin-3", "gene_name": "botv", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9V730-1", "protein_name": "Exostosin-1", "gene_name": "ttv", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9Y169-1", "protein_name": "Exostosin-2", "gene_name": "sotv", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "Q9XZ08", "url": "https://www.uniprot.org/uniprotkb/Q9XZ08" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": 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[] } ] }, { "title": "Functional expression of a multisubstrate deoxyribonucleoside kinase from Drosophila melanogaster and its C-terminal deletion mutants.", "journal": "The Journal of biological chemistry", "date": "2000-03-03", "authors": "Munch-Petersen B, Knecht W, Lenz C, S\u00f8ndergaard L, Piskur J", "reference": { "type": "PubMed", "id": "10692477", "url": "https://pubmed.ncbi.nlm.nih.gov/10692477" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9XZT6-1", "protein_name": "Deoxynucleoside kinase", "gene_name": "dnk", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "Q9XZT6", "url": "https://www.uniprot.org/uniprotkb/Q9XZT6" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.10692477", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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Cell", "date": "2021", "authors": "Bawa S, Gameros S, Baumann K, Brooks DS, Kollhoff JA, Zolkiewski M, Re Cecconi AD, Panini N, Russo M, Piccirillo R, Johnson DK, Kashipathy MM, Battaile KP, Lovell S, Bouyain SEA, Kawakami J, Geisbrecht ER", "reference": { "type": "PubMed", "id": "33296226", "url": "https://pubmed.ncbi.nlm.nih.gov/33296226" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "B7YZK8-1", "protein_name": "Thin, isoform C", "gene_name": "tn", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "B7YZK8", "url": "https://www.uniprot.org/uniprotkb/B7YZK8" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.33296226", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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Rep.", "date": "2015", "authors": "Wongsantichon Jantana, Robinson Robert C, Ketterman Albert J", "reference": { "type": "PubMed", "id": "26487708", "url": "https://pubmed.ncbi.nlm.nih.gov/26487708" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A1ZB71-1", "protein_name": "1.11.1.9; 2.5.1.18; Glutathione S transferase E6", "gene_name": "GstE6", "tax_name": "Fruit fly" } ], "species": [ { "name": "Drosophila melanogaster", "taxid": 7227, "evidence": [ { "database": "UniProtKB", "id": "A1ZB71", "url": "https://www.uniprot.org/uniprotkb/A1ZB71" } ], "common_name": "Fruit fly", "glygen_name": "Fruit fly", "reference_species": "Drosophila melanogaster [7227]" } ], "record_id": "pubmed.26487708", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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Biol.", "date": "2023", "authors": "Yanagisawa Haruaki, Kita Yoshihiro, Oda Toshiyuki, Kikkawa Masahide", "reference": { "type": "PubMed", "id": "37805589", "url": "https://pubmed.ncbi.nlm.nih.gov/37805589" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A0A8D2A9I1-1", "protein_name": "Uroplakin 2", "gene_name": "UPK2", "tax_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QJU5-1", "protein_name": "Uroplakin 3A", "gene_name": "UPK3A", "tax_name": "Pig" } ], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A8D2A9I1", "url": "https://www.uniprot.org/uniprotkb/A0A8D2A9I1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "record_id": "pubmed.37805589", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular analyses of the Arabidopsis TUBBY-like protein gene family.", "journal": "Plant Physiol.", "date": "2004", "authors": "Lai Chia-Ping, Lee Chang-Lung, Chen Po-Hsuan, Wu Shu-Hsing, Yang Chien-Chih, Shaw Jei-Fu", "reference": { "type": "PubMed", "id": "15064372", "url": "https://pubmed.ncbi.nlm.nih.gov/15064372" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9S9M8-1", "protein_name": "Tubby-like protein 8", "gene_name": "TLP8; TULP8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q944S3-1", "protein_name": "Tubby-like F-box protein 5", "gene_name": "TLP5; TULP5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NPQ1-1", "protein_name": "Tubby-like F-box protein 11", "gene_name": "TLP11; TULP11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": 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"Q8GVE5-1", "protein_name": "Tubby-like F-box protein 2", "gene_name": "TULP2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9S9M8", "url": "https://www.uniprot.org/uniprotkb/Q9S9M8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15064372", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 11 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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Mol. Biol.", "date": "2009", "authors": "Simpson Paul J, Tantitadapitak Chonticha, Reed Anna M, Mather Owen C, Bunce Christopher M, White Scott A, Ride Jon P", "reference": { "type": "PubMed", "id": "19616008", "url": "https://pubmed.ncbi.nlm.nih.gov/19616008" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M338-1", "protein_name": "Aldo-keto reductase family 4 member C11", "gene_name": "AKR4C11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84TF0-1", "protein_name": "Aldo-keto reductase family 4 member C10", "gene_name": "AKR4C10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80944-1", "protein_name": "Aldo-keto reductase family 4 member C8", "gene_name": "AKR4C8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0PGJ6-1", "protein_name": "NADPH-dependent aldo-keto reductase, chloroplastic", "gene_name": "AKR4C9", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M338", "url": "https://www.uniprot.org/uniprotkb/Q9M338" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19616008", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular and genetic characterization of the gene family encoding the voltage-dependent anion channel in Arabidopsis.", "journal": "J. Exp. 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