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Biosci.", "date": "2017", "authors": "Parida Adwaita Prasad, Sharma Amrapali, Sharma Arun Kumar", "reference": { "type": "PubMed", "id": "28229965", "url": "https://pubmed.ncbi.nlm.nih.gov/28229965" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FML2-1", "protein_name": "Histone deacetylase 6", "gene_name": "HDA6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZVD5-1", "protein_name": "Protein argonaute 4", "gene_name": "AGO4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FME2-1", "protein_name": "Nuclear transport factor 2", "gene_name": "NTF2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P49688-1", "protein_name": "Small ribosomal subunit protein uS5x", "gene_name": "RPS2C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTJ1-1", "protein_name": "Methyl-CpG-binding domain-containing protein 6", "gene_name": "MBD6", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis 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Evol.", "date": "2003", "authors": "Vincentz Michel, Bandeira-Kobarg Claudia, Gauer Luciane, Schl\u00f6gl Paulo, Leite Adilson", "reference": { "type": "PubMed", "id": "12569427", "url": "https://pubmed.ncbi.nlm.nih.gov/12569427" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FUD3-1", "protein_name": "Basic leucine zipper 9", "gene_name": "BZIP9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1G6-1", "protein_name": "Basic leucine zipper 25", "gene_name": "BZIP25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "B9DGI8-1", "protein_name": "Basic leucine zipper 63", "gene_name": "BZIP63; BZO2H3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22763-1", "protein_name": "Basic leucine zipper 10", "gene_name": "BZIP10; BZO2H1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FUD3", "url": "https://www.uniprot.org/uniprotkb/Q9FUD3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12569427", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Synergistic activation of seed storage protein gene expression in Arabidopsis by ABI3 and two bZIPs related to OPAQUE2.", "journal": "J. Biol. Chem.", "date": "2003", "authors": "Lara Pilar, O\u00f1ate-S\u00e1nchez Luis, Abraham Zamira, Ferr\u00e1ndiz Cristina, D\u00edaz Isabel, Carbonero Pilar, Vicente-Carbajosa Jes\u00faus", "reference": { "type": "PubMed", "id": "12657652", "url": "https://pubmed.ncbi.nlm.nih.gov/12657652" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FUD3-1", "protein_name": "Basic leucine zipper 9", "gene_name": "BZIP9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1G6-1", "protein_name": "Basic leucine zipper 25", "gene_name": "BZIP25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q01593-1", "protein_name": "B3 domain-containing transcription factor ABI3", "gene_name": "ABI3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "B9DGI8-1", "protein_name": "Basic leucine zipper 63", "gene_name": "BZIP63; BZO2H3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22763-1", "protein_name": "Basic leucine zipper 10", "gene_name": "BZIP10; BZO2H1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FUD3", "url": "https://www.uniprot.org/uniprotkb/Q9FUD3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12657652", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cross-species annotation of basic leucine zipper factor interactions: Insight into the evolution of closed interaction networks.", "journal": "Mol. Biol. Evol.", "date": "2006", "authors": "Deppmann Christopher D, Alvania Rebecca S, Taparowsky Elizabeth J", "reference": { "type": "PubMed", "id": "16731568", "url": "https://pubmed.ncbi.nlm.nih.gov/16731568" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FUD3-1", "protein_name": "Basic leucine zipper 9", "gene_name": "BZIP9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1G6-1", "protein_name": "Basic leucine zipper 25", "gene_name": "BZIP25", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93XM6-1", "protein_name": "Transcription factor TGA9", "gene_name": "TGA9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CA46-1", "protein_name": "Basic leucine zipper 8", "gene_name": "BZIP8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "B9DGI8-1", "protein_name": "Basic leucine zipper 63", "gene_name": "BZIP63; BZO2H3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "E3VNM4-1", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The ENHANCER OF SHOOT REGENERATION 2 gene in Arabidopsis regulates CUP-SHAPED COTYLEDON 1 at the transcriptional level and controls cotyledon development.", "journal": "Plant & cell physiology", "date": "2006-11", "authors": "Ikeda Yoshihisa, Banno Hiroharu, Niu Qi-Wen, Howell Stephen H, Chua Nam-Hai", "reference": { "type": "PubMed", "id": "17056621", "url": "https://pubmed.ncbi.nlm.nih.gov/17056621" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FYK5-1", 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Cell", "date": "2017", "authors": "Guti\u00e9rrez-Alan\u00eds Dolores, Yong-Villalobos Lenin, Jim\u00e9nez-Sandoval Pedro, Alatorre-Cobos Fulgencio, Oropeza-Aburto Araceli, Mora-Mac\u00edas Javier, S\u00e1nchez-Rodr\u00edguez Federico, Cruz-Ram\u00edrez Alfredo, Herrera-Estrella Luis", "reference": { "type": "PubMed", "id": "28586647", "url": "https://pubmed.ncbi.nlm.nih.gov/28586647" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9FZ59-1", "protein_name": "Leucine-rich repeat receptor-like protein kinase PEPR2", "gene_name": "PEPR2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80809-1", "protein_name": "Receptor-like protein CLAVATA2", "gene_name": "CLV2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q3ECJ5-1", "protein_name": "CLAVATA3/ESR (CLE)-related protein 14", "gene_name": "CLE14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LYU7-1", "protein_name": "Inactive leucine-rich repeat receptor-like protein kinase CORYNE", "gene_name": "CRN", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9FZ59", "url": "https://www.uniprot.org/uniprotkb/Q9FZ59" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.28586647", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis RGL1 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}, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", 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"protein_name": "Fructose-bisphosphate aldolase 6, cytosolic", "gene_name": "FBA6", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LF98", "url": "https://www.uniprot.org/uniprotkb/Q9LF98" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12953116", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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"name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LF98", "url": "https://www.uniprot.org/uniprotkb/Q9LF98" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15734904", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Roles of Receptor-Like Cytoplasmic Kinase VII Members in Pattern-Triggered Immune Signaling.", "journal": "Plant physiology", "date": "2018-08", "authors": "Rao Shaofei, Zhou Zhaoyang, Miao Pei, Bi Guozhi, Hu Man, Wu Ying, Feng Feng, Zhang Xiaojuan, Zhou Jian-Min", "reference": { "type": "PubMed", "id": "29907700", "url": "https://pubmed.ncbi.nlm.nih.gov/29907700" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LFP7-1", "protein_name": "Serine/threonine-protein kinase PBL34", "gene_name": "PBL34", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J0D2-1", "protein_name": "Serine/threonine-protein kinase PBL36", "gene_name": "PBL36", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRH7-1", "protein_name": "Serine/threonine-protein kinase PBL35", "gene_name": "PBL35", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": 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[] } ] }, { "title": "The geminivirus nuclear shuttle protein is a virulence factor that suppresses transmembrane receptor kinase activity.", "journal": "Genes & development", "date": "2004-10-15", "authors": "Fontes Elizabeth P B, Santos Anesia A, Luz Dirce F, Waclawovsky Alessandro J, Chory Joanne", "reference": { "type": "PubMed", "id": "15489295", "url": "https://pubmed.ncbi.nlm.nih.gov/15489295" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LFS4-1", "protein_name": "Protein CLAVATA3 INSENSITIVE RECEPTOR KINASE 5", "gene_name": "CIK5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RY65-1", "protein_name": "Protein CLAVATA3 INSENSITIVE RECEPTOR KINASE 6", "gene_name": "CIK6; NIK2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93ZS4-1", "protein_name": "Protein CLAVATA3 INSENSITIVE RECEPTOR KINASE 1", "gene_name": "CIK1; NIK3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "The ribosomal protein L10/QM-like protein is a component of the NIK-mediated antiviral signaling.", "journal": "Virology", "date": "2008-10-25", "authors": "Rocha Carolina S, Santos An\u00e9sia A, Machado Jo\u00e3o Paulo B, Fontes Elizabeth P B", "reference": { "type": "PubMed", "id": "18789471", "url": "https://pubmed.ncbi.nlm.nih.gov/18789471" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LFS4-1", "protein_name": "Protein CLAVATA3 INSENSITIVE RECEPTOR KINASE 5", "gene_name": "CIK5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93VT9-1", "protein_name": "Large ribosomal subunit protein uL16z", "gene_name": "RPL10A; SAC52", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RY65-1", "protein_name": "Protein CLAVATA3 INSENSITIVE RECEPTOR KINASE 6", "gene_name": "CIK6; NIK2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, 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Biol.", "date": "2003", "authors": "Elliott Barbara J, Dattaroy Tomal, Meeks-Midkiff Lisa R, Forbes Kevin P, Hunt Arthur G", "reference": { "type": "PubMed", "id": "12602868", "url": "https://pubmed.ncbi.nlm.nih.gov/12602868" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LKF9-1", "protein_name": "Cleavage and polyadenylation specificity factor subunit 2", "gene_name": "CPSF100", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LKF9", "url": "https://www.uniprot.org/uniprotkb/Q9LKF9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12602868", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Altered interactions within FY/AtCPSF complexes required for Arabidopsis FCA-mediated chromatin silencing.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "2009", "authors": "Manzano David, Marquardt Sebastian, Jones Alexandra M E, B\u00e4urle Isabel, Liu Fuquan, Dean Caroline", "reference": { "type": "PubMed", "id": "19439664", "url": "https://pubmed.ncbi.nlm.nih.gov/19439664" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LKF9-1", "protein_name": "Cleavage and polyadenylation specificity factor subunit 2", "gene_name": "CPSF100", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NLV4-1", "protein_name": "Flowering time control protein FY", "gene_name": "FY", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FGR0-1", "protein_name": "Cleavage and polyadenylation specificity factor subunit 1", "gene_name": "CPSF160", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LKF9", "url": "https://www.uniprot.org/uniprotkb/Q9LKF9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 488, "end_pos": 488, "sequence_org": "P", "sequence_mut": "S", "comment": "Increased FLC levels and late flowering.", "evidence": [ { "database": "UniProtKB", "id": "Q6NLV4", "url": "https://www.uniprot.org/uniprotkb/Q6NLV4" }, { "database": "PubMed", "id": "19439664", "url": "https://pubmed.ncbi.nlm.nih.gov/19439664" } ], "uniprot_canonical_ac": "Q6NLV4-1" }, { "start_pos": 489, "end_pos": 489, "sequence_org": "P", "sequence_mut": "S", "comment": "Increased FLC levels and late flowering.", "evidence": [ { "database": "UniProtKB", "id": "Q6NLV4", "url": "https://www.uniprot.org/uniprotkb/Q6NLV4" }, { "database": "PubMed", "id": "19439664", "url": "https://pubmed.ncbi.nlm.nih.gov/19439664" } ], "uniprot_canonical_ac": "Q6NLV4-1" } ], "record_id": "pubmed.19439664", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ 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"field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Distinctive interactions of the Arabidopsis homolog of the 30 kD subunit of the cleavage and polyadenylation specificity factor (AtCPSF30) with other polyadenylation factor subunits.", "journal": "BMC Cell Biol.", "date": "2009", "authors": "Rao Suryadevara, Dinkins Randy D, Hunt Arthur G", "reference": { "type": "PubMed", "id": "19573236", "url": 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Three SnRK2 protein kinases are the main positive regulators of abscisic acid signaling in response to water stress in Arabidopsis.", "journal": "Plant Cell Physiol.", "date": "2009", "authors": "Fujita Yasunari, Nakashima Kazuo, Yoshida Takuya, Katagiri Takeshi, Kidokoro Satoshi, Kanamori Norihito, Umezawa Taishi, Fujita Miki, Maruyama Kyonoshin, Ishiyama Kanako, Kobayashi Masatomo, Nakasone Shoko, Yamada Kohji, Ito Takuya, Shinozaki Kazuo, Yamaguchi-Shinozaki Kazuko", "reference": { "type": "PubMed", "id": "19880399", "url": "https://pubmed.ncbi.nlm.nih.gov/19880399" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LNW3-1", "protein_name": "Protein phosphatase 2C 3", "gene_name": "AIP1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LNW3", "url": "https://www.uniprot.org/uniprotkb/Q9LNW3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19880399", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", 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Biotechnol. Biochem.", "date": "2004", "authors": "Tarutani Yoshiaki, Morimoto Takashi, Sasaki Akiko, Yasuda Michiko, Nakashita Hideo, Yoshida Shigeo, Yamaguchi Isomaro, Suzuki Yoshihito", "reference": { "type": "PubMed", "id": "15388970", "url": "https://pubmed.ncbi.nlm.nih.gov/15388970" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LP77-1", "protein_name": "Probable inactive receptor kinase At1g48480", "gene_name": "RKL1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LVI6-1", "protein_name": "Probable inactive receptor kinase RLK902", "gene_name": "RLK902", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LP77", "url": "https://www.uniprot.org/uniprotkb/Q9LP77" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15388970", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "New pollen-specific receptor kinases identified in tomato, maize and Arabidopsis: the tomato kinases show overlapping but distinct localization patterns on pollen tubes.", "journal": "Plant Mol. Biol.", "date": "2002", "authors": "Kim Hyun Uk, Cotter Robyn, Johnson Sheila, Senda Mineo, Dodds Peter, Kulikauska Rima, Tang Weihua, Ezcura Ines, Herzmark Paul, McCormick Sheila", "reference": { "type": "PubMed", "id": "12139002", "url": "https://pubmed.ncbi.nlm.nih.gov/12139002" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LPT1-1", "protein_name": "Pollen receptor-like kinase 5", "gene_name": "PRK5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84JQ4-1", "protein_name": "Pollen receptor-like kinase 2", "gene_name": "PRK2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "C0LGU0-1", "protein_name": "Pollen receptor-like kinase 1", "gene_name": "PRK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LJY0-1", "protein_name": "Pollen receptor-like kinase 4", "gene_name": "PRK4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1L7-1", "protein_name": "Pollen receptor-like kinase 3", "gene_name": 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"journal": "Genetics", "date": "2001-10", "authors": "Dill A, Sun T", "reference": { "type": "PubMed", "id": "11606552", "url": "https://pubmed.ncbi.nlm.nih.gov/11606552" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LQT8-1", "protein_name": "DELLA protein GAI", "gene_name": "GAI", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SLH3-1", "protein_name": "DELLA protein RGA", "gene_name": "RGA", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LQT8", "url": "https://www.uniprot.org/uniprotkb/Q9LQT8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11606552", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": 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"reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 138, "end_pos": 138, "sequence_org": "E", "sequence_mut": "K", "comment": "In gar2-1/sly1-d; gain of function allele that promotes plant growth by increasing the affinity with DELLA protein substrates.", "evidence": [ { "database": "UniProtKB", "id": "Q9STX3", "url": "https://www.uniprot.org/uniprotkb/Q9STX3" }, { "database": "PubMed", "id": "15155881", "url": "https://pubmed.ncbi.nlm.nih.gov/15155881" }, { "database": "PubMed", "id": "15161962", "url": "https://pubmed.ncbi.nlm.nih.gov/15161962" } ], "uniprot_canonical_ac": "Q9STX3-1" } ], "record_id": "pubmed.15155881", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Gibberellin-induced DELLA recognition by the gibberellin receptor GID1.", "journal": "Nature", "date": "2008", "authors": "Murase Kohji, Hirano Yoshinori, Sun Tai-ping, Hakoshima Toshio", "reference": { "type": "PubMed", "id": "19037309", "url": "https://pubmed.ncbi.nlm.nih.gov/19037309" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LQT8-1", "protein_name": "DELLA protein GAI", "gene_name": "GAI", "tax_name": 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Arabidopsis GAI gene defines a signaling pathway that negatively regulates gibberellin responses.", "journal": "Genes & development", "date": "1997-12-01", "authors": "Peng J, Carol P, Richards D E, King K E, Cowling R J, Murphy G P, Harberd N P", "reference": { "type": "PubMed", "id": "9389651", "url": "https://pubmed.ncbi.nlm.nih.gov/9389651" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LQT8-1", "protein_name": "DELLA protein GAI", "gene_name": "GAI", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SLH3-1", "protein_name": "DELLA protein RGA", "gene_name": "RGA", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LQT8", "url": "https://www.uniprot.org/uniprotkb/Q9LQT8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 28, "end_pos": 44, "sequence_org": "DELLAVLGYKVRSSEMA", "sequence_mut": "", "comment": "In gai; causes a dwarf phenotype.", "evidence": [ { "database": "UniProtKB", "id": "Q9LQT8", "url": "https://www.uniprot.org/uniprotkb/Q9LQT8" }, { "database": "PubMed", "id": "9389651", "url": "https://pubmed.ncbi.nlm.nih.gov/9389651" } ], "uniprot_canonical_ac": "Q9LQT8-1" } ], "record_id": "pubmed.9389651", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Arabidopsis LRR-RLK, PXC1, is a regulator of secondary wall formation correlated with the TDIF-PXY/TDR-WOX4 signaling pathway.", "journal": "BMC Plant Biol.", "date": "2013", "authors": "Wang Jiehua, Kucukoglu Melis, Zhang Linbin, Chen Peng, Decker Daniel, Nilsson Ove, Jones Brian, Sandberg G\u00f6ran, Zheng Bo", "reference": { "type": "PubMed", "id": "23815750", "url": "https://pubmed.ncbi.nlm.nih.gov/23815750" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LZV7-1", "protein_name": "Leucine-rich repeat receptor-like protein kinase PXC2", "gene_name": "PXC2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22938-1", "protein_name": "Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3", "gene_name": "PXC3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJQ1-1", "protein_name": "Leucine-rich repeat receptor-like protein kinase PXC1", "gene_name": "PXC1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LZV7", "url": "https://www.uniprot.org/uniprotkb/Q9LZV7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.23815750", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Two novel genes encoding SNF-1 related protein kinases from Arabidopsis thaliana: differential accumulation of AtSR1 and AtSR2 transcripts in response to cytokinins and sugars, and phosphorylation of sucrose synthase by AtSR2.", "journal": "Mol. Gen. Genet.", "date": "2001", "authors": "Chikano H, Ogawa M, Ikeda Y, Koizumi N, Kusano T, Sano H", "reference": { "type": "PubMed", "id": "11212922", "url": "https://pubmed.ncbi.nlm.nih.gov/11212922" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LZW4-1", "protein_name": "CBL-interacting serine/threonine-protein kinase 14", "gene_name": "CIPK14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XIW0-1", "protein_name": "CBL-interacting serine/threonine-protein kinase 7", "gene_name": "CIPK7", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LZW4", "url": "https://www.uniprot.org/uniprotkb/Q9LZW4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11212922", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Sugar responsible and tissue specific expression of a gene encoding AtCIPK14, an Arabidopsis CBL-interacting protein kinase.", "journal": "Biosci. Biotechnol. Biochem.", "date": "2005", "authors": "Lee Eun-Jeong, Iai Hiromichi, Sano Hiroshi, Koizumi Nozomu", "reference": { "type": "PubMed", "id": "15665497", "url": "https://pubmed.ncbi.nlm.nih.gov/15665497" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LZW4-1", "protein_name": "CBL-interacting serine/threonine-protein kinase 14", "gene_name": "CIPK14", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LZW4", "url": "https://www.uniprot.org/uniprotkb/Q9LZW4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15665497", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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"glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A nuclear gene encoding the iron-sulfur subunit of mitochondrial complex II is regulated by B3 domain transcription factors during seed development in Arabidopsis.", "journal": "Plant physiology", "date": "2009-05", "authors": "Roschzttardtz Hannetz, Fuentes Ignacia, V\u00e1squez Marcos, Corval\u00e1n Claudia, Le\u00f3n Gabriel, G\u00f3mez Isabel, Araya Alejandro, Holuigue Loreto, Vicente-Carbajosa Jes\u00fas, Jordana Xavier", "reference": { "type": "PubMed", "id": "19261733", "url": "https://pubmed.ncbi.nlm.nih.gov/19261733" }, 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"The glutamate carboxypeptidase AMP1 mediates abscisic acid and abiotic stress responses in Arabidopsis.", "journal": "The New phytologist", "date": "2013-07", "authors": "Shi Yiting, Wang Zheng, Meng Pei, Tian Siqi, Zhang Xiaoyan, Yang Shuhua", "reference": { "type": "PubMed", "id": "23621575", "url": "https://pubmed.ncbi.nlm.nih.gov/23621575" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M1S8-1", "protein_name": "Probable glutamate carboxypeptidase AMP1", "gene_name": "AMP1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M1S8", "url": "https://www.uniprot.org/uniprotkb/Q9M1S8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.23621575", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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