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Res.", "date": "2000", "authors": "Griepentrog T, Bauer M, Hornstein C, Sauer H, Jirikowski G F", "reference": { "type": "PubMed", "id": "10824705", "url": "https://pubmed.ncbi.nlm.nih.gov/10824705" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q07654-1", "protein_name": "Trefoil factor 3", "gene_name": "TFF3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q07654", "url": "https://www.uniprot.org/uniprotkb/Q07654" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10824705", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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Nordsiek G, Hornischer K, Brant P, Scharfe M, Schon O, Desario A, Reichelt J, Kauer G, Blocker H, Ramser J, Beck A, Klages S, Hennig S, Riesselmann L, Dagand E, Haaf T, Wehrmeyer S, Borzym K, Gardiner K, Nizetic D, Francis F, Lehrach H, Reinhardt R, Yaspo M L,", "reference": { "type": "PubMed", "id": "10830953", "url": "https://pubmed.ncbi.nlm.nih.gov/10830953" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q07654-1", "protein_name": "Trefoil factor 3", "gene_name": "TFF3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04155-1", "protein_name": "Trefoil factor 1", "gene_name": "TFF1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q07654", "url": "https://www.uniprot.org/uniprotkb/Q07654" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10830953", "abstract": "", "glycosylation": [], 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Korostishevsky M, Wattenhofer M, Guipponi M, Barras C, Rossier C, Shibuya K, Wang J, Kawasaki K, Asakawa S, Minoshima S, Shimizu N, Antonarakis S, Bonn\u00e9-Tamir B", "reference": { "type": "PubMed", "id": "10950923", "url": "https://pubmed.ncbi.nlm.nih.gov/10950923" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q07654-1", "protein_name": "Trefoil factor 3", "gene_name": "TFF3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04155-1", "protein_name": "Trefoil factor 1", "gene_name": "TFF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56181-1", "protein_name": "NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial", "gene_name": "NDUFV3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q03403-1", "protein_name": "Trefoil factor 2", "gene_name": "TFF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45844-1", "protein_name": "ATP-binding cassette sub-family G member 1", "gene_name": "ABCG1", "tax_name": "Human" } ], "species": 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"hP1.B, a human P-domain peptide homologous with rat intestinal trefoil factor, is expressed also in the ulcer-associated cell lineage and the uterus.", "journal": "Proc. 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U.S.A.", "date": "1993", "authors": "Hauser F, Poulsom R, Chinery R, Rogers LA, Hanby AM, Wright NA, Hoffmann W", "reference": { "type": "PubMed", "id": "8346203", "url": "https://pubmed.ncbi.nlm.nih.gov/8346203" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q07654-1", "protein_name": "Trefoil factor 3", "gene_name": "TFF3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q07654", "url": "https://www.uniprot.org/uniprotkb/Q07654" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8346203", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of human intestinal trefoil factor. Goblet cell-specific expression of a peptide targeted for apical secretion.", "journal": "J. Biol. 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The gene encoding human intestinal trefoil factor (TFF3) is located on chromosome 21q22.3 clustered with other members of the trefoil peptide family.", "journal": "Genomics", "date": "1996", "authors": "Chinery R, Williamson J, Poulsom R", "reference": { "type": "PubMed", "id": "8833157", "url": "https://pubmed.ncbi.nlm.nih.gov/8833157" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q07654-1", "protein_name": "Trefoil factor 3", "gene_name": "TFF3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q07654", "url": "https://www.uniprot.org/uniprotkb/Q07654" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8833157", "abstract": "", "glycosylation": [], "mutagenesis": 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Immunol.", "date": "2005", "authors": "Begley Gail S, Horvath Andrea R, Taylor Jenny C, Higgins Christopher F", "reference": { "type": "PubMed", "id": "15488952", "url": "https://pubmed.ncbi.nlm.nih.gov/15488952" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P28074-1", "protein_name": "Proteasome subunit beta type-5", "gene_name": "PSMB5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08183-1", "protein_name": "ATP-dependent translocase ABCB1", "gene_name": "ABCB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28062-1", "protein_name": "Proteasome subunit beta type-8", "gene_name": "PSMB8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q03518-1", "protein_name": "Antigen peptide transporter 1", "gene_name": "TAP1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P28074", "url": "https://www.uniprot.org/uniprotkb/P28074" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15488952", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Over-expression of genes and proteins of ubiquitin specific peptidases (USPs) and proteasome subunits (PSs) in breast cancer tissue observed by the methods of RFDD-PCR and proteomics.", "journal": "Breast Cancer Res. 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Biol.", "date": "1994", "authors": "Belich MP, Glynne RJ, Senger G, Sheer D, Trowsdale J", "reference": { "type": "PubMed", "id": "7820546", "url": "https://pubmed.ncbi.nlm.nih.gov/7820546" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P28074-1", "protein_name": "Proteasome subunit beta type-5", "gene_name": "PSMB5", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P28074", "url": "https://www.uniprot.org/uniprotkb/P28074" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7820546", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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chromosomes.", "journal": "Journal of cell science", "date": "2018", "authors": "Platani M, Samejima I, Samejima K, Kanemaki MT, Earnshaw WC", "reference": { "type": "PubMed", "id": "29618633", "url": "https://pubmed.ncbi.nlm.nih.gov/29618633" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96EE3-2", "protein_name": "Nucleoporin SEH1", "gene_name": "SEH1L", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96EE3", "url": "https://www.uniprot.org/uniprotkb/Q96EE3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.29618633", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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Rep.", "date": "2018", "authors": "Uchida Shotaro, Horie Ryo, Sato Hiroki, Kai Chieko, Yoneda Misako", "reference": { "type": "PubMed", "id": "29769705", "url": "https://pubmed.ncbi.nlm.nih.gov/29769705" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q04323-1", "protein_name": "UBX domain-containing protein 1", "gene_name": "UBXN1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q04323", "url": "https://www.uniprot.org/uniprotkb/Q04323" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.29769705", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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[] } ] }, { "title": "Novel mutations in TTC37 associated with tricho-hepato-enteric syndrome.", "journal": "Human mutation", "date": "2011", "authors": "Fabre A, Martinez-Vinson C, Roquelaure B, Missirian C, Andre N, Breton A, Lachaux A, Odul E, Colomb V, Lemale J, Cezard JP, Goulet O, Sarles J, Levy N, Badens C", "reference": { "type": "PubMed", "id": "21120949", "url": "https://pubmed.ncbi.nlm.nih.gov/21120949" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6PGP7-1", "protein_name": "Superkiller complex protein 3", "gene_name": "SKIC3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q6PGP7", "url": "https://www.uniprot.org/uniprotkb/Q6PGP7" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21120949", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "PSGR, a novel prostate-specific gene with homology to a G protein-coupled receptor, is overexpressed in prostate cancer.", "journal": "Cancer Res.", "date": "2000", "authors": "Xu LL, Stackhouse BG, Florence K, Zhang W, Shanmugam N, Sesterhenn IA, Zou Z, Srikantan V, Augustus M, Roschke V, Carter K, McLeod DG, Moul JW, Soppett D, Srivastava S", "reference": { "type": "PubMed", "id": "11118034", "url": "https://pubmed.ncbi.nlm.nih.gov/11118034" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9H255-1", "protein_name": "Olfactory receptor 51E2", "gene_name": "OR51E2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9H255", "url": "https://www.uniprot.org/uniprotkb/Q9H255" } ], "common_name": "Human", "glygen_name": "Human", 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"date": "2001", "authors": "Yuan T T, Toy P, McClary J A, Lin R J, Miyamoto N G, Kretschmer P J", "reference": { "type": "PubMed", "id": "11707321", "url": "https://pubmed.ncbi.nlm.nih.gov/11707321" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9H255-1", "protein_name": "Olfactory receptor 51E2", "gene_name": "OR51E2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O88628-1", "protein_name": "Olfactory receptor 51E2", "gene_name": "Olr59; Or51e2", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q8VBV9-1", "protein_name": "Olfactory receptor 51E2", "gene_name": "Or51e2", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9H255", "url": "https://www.uniprot.org/uniprotkb/Q9H255" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11707321", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": 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